View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1787_low_6 (Length: 658)
Name: NF1787_low_6
Description: NF1787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1787_low_6 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 509; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 60 - 620
Target Start/End: Original strand, 1154060 - 1154620
Alignment:
| Q |
60 |
tacaattaaaggaacaataggatatattcctcctggtaaagttcttaaatccattaatagttactatctttcagaaatttagcattgctaatttattatt |
159 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
1154060 |
tacaattaaaggaacaataggatatattcctcctggtaaagttcttaaatccattaatagttactatctttcagaaatttggcattgctaatttattatt |
1154159 |
T |
 |
| Q |
160 |
atttaaattagttatgaccatcaatgtgatatatatacgtatacacacaatatactccttcattattcctcccctaaatagttgtagtttttgtctgaaa |
259 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1154160 |
atttaaattagttatgaccatcaatgtgatatatatacatatacacacaatatactccttcattattcctcccctaaatagttgtagtttttgtctgaaa |
1154259 |
T |
 |
| Q |
260 |
aagagtacggaacaggtgttccagtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatag |
359 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1154260 |
aagagtacggaacaggtgttccagtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatag |
1154359 |
T |
 |
| Q |
360 |
tatattttgtgagaatttaagcctacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgtcgtttgtc |
459 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1154360 |
tatattttgtgagaatttaagcctatacgagttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgccgtttgtc |
1154459 |
T |
 |
| Q |
460 |
gaagatcagacaggaattgtggaaaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcgaa |
559 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
1154460 |
gaagatcagacagaaattgtggaaaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgtactgaagagtttcctgctcatcgaa |
1154559 |
T |
 |
| Q |
560 |
tgctaataaaagatgttatagttaagttgaatgaaatcaaatcaaagtttccatgctagga |
620 |
Q |
| |
|
|| | |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1154560 |
tgttgataaaacatgttattgttaagttgaatgaaatcaaatcaaagattccatgctagga |
1154620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 245; Significance: 1e-135; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 268 - 640
Target Start/End: Complemental strand, 29622827 - 29622455
Alignment:
| Q |
268 |
ggaacaggtgttccagtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatagtatatttt |
367 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | ||| || |||| |
|
|
| T |
29622827 |
ggaacaggtgttccagtatcaccacagggagatatctacagctttggcattcttctgttagagatgctcactggaaagagaccagcagataacatgtttt |
29622728 |
T |
 |
| Q |
368 |
gtgagaatttaagcctacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgtcgtttgtcgaagatca |
467 |
Q |
| |
|
|||||||||||||||||||| | || ||||| ||||| ||| | |||||||| ||||||||||| || ||||| ||||| | |||| ||||||| |
|
|
| T |
29622727 |
gtgagaatttaagcctacacaaattctgtaagatgaagattccagaaggaattcttgagatagtggattcccgtttacttataccatttgctgaagatcg |
29622628 |
T |
 |
| Q |
468 |
gacaggaattgtggaaaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcgaatgctaata |
567 |
Q |
| |
|
|||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29622627 |
gacagggattgtggaaaacaagattaggaattgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcgaatgctaata |
29622528 |
T |
 |
| Q |
568 |
aaagatgttatagttaagttgaatgaaatcaaatcaaagtttccatgctaggattcgttgcgttgctactgtg |
640 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29622527 |
aaagatgttatagttaagttgaatgaaatcaaatcaaagtttccatgctaggattcgttgcgttgctactgtg |
29622455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 29622971 - 29622904
Alignment:
| Q |
31 |
cattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaa |
98 |
Q |
| |
|
||||||||||| |||||| | | ||| || |||||||| ||||| ||||||||| ||||||||||||| |
|
|
| T |
29622971 |
cattcaagtaatgatcaaattacttcttccacaattaagggaactataggatatgttcctcctggtaa |
29622904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 573
Target Start/End: Original strand, 25829752 - 25829826
Alignment:
| Q |
502 |
ttggtgatgtttgctagaattggagttgcatgttctcaaga---gtttcctgctcatcgaatgctaataaaagat |
573 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||| |||| |||||||||||||| |||||| |||||||| |
|
|
| T |
25829752 |
ttggtgatgtttgaaggaattggagttacatgttctgaagaagagtttcctgctcatcaaatgcttgtaaaagat |
25829826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 177; Significance: 4e-95; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 250 - 614
Target Start/End: Original strand, 35371076 - 35371440
Alignment:
| Q |
250 |
ttgtctgaaaaagagtacggaacaggtgttccagtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagac |
349 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35371076 |
ttgtttgaaaaagagtacgggacaggtgttccagtatcaccacatggagatatctatagctttgggattcttctgttagagatgctcaccggaaagagac |
35371175 |
T |
 |
| Q |
350 |
caaccaatagtatattttgtgagaatttaagcctacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttat |
449 |
Q |
| |
|
|||| ||| || |||| ||||| | |||| || || || || || |||||||||||| | |||||||||||||||||||| || || ||||||| | |
|
|
| T |
35371176 |
caacagataacatgttttctgagagtctaagtctgcatgaattctgcaaaatgaaaattccagaaggaatccttgagatagtagattcacatttgctttt |
35371275 |
T |
 |
| Q |
450 |
gtcgtttgtcgaagatcagacaggaattgtggaaaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcct |
549 |
Q |
| |
|
| |||| |||||| | ||||| ||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||| |||||| |||| |
|
|
| T |
35371276 |
accatttgctgaagatgatacagggattgtggaaaacaagattaggaattgtttggtgatgtttgctgcaattggagttgcatgttctgaagagtctcct |
35371375 |
T |
 |
| Q |
550 |
gctcatcgaatgctaataaaagatgttatagttaagttgaatgaaatcaaatcaaagtttccatg |
614 |
Q |
| |
|
|||||||||||| | |||||||||| ||||| ||| ||||||||||||||||||| ||||||||| |
|
|
| T |
35371376 |
gctcatcgaatgttgataaaagatgctatagctaatttgaatgaaatcaaatcaatgtttccatg |
35371440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 258 - 588
Target Start/End: Original strand, 35411242 - 35411572
Alignment:
| Q |
258 |
aaaagagtacggaacaggtgttccagtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaat |
357 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| | |||||||||||| ||| |
|
|
| T |
35411242 |
aaaagagtacggagaaggtgttccagtatcaccacggggagatatctacagctttgggattcttctactagagatgttcactgcaaagagaccaacaaat |
35411341 |
T |
 |
| Q |
358 |
agtatattttgtgagaatttaagcctacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgtcgtttg |
457 |
Q |
| |
|
| | |||| ||||| | |||| ||||| || || || |||||||||||||| |||||||||||||||||||| || || ||||||| | | |||| |
|
|
| T |
35411342 |
aacaacttttctgagagtctaagtctacatgaattctgcaaaatgaaaatttcagaaggaatccttgagatagtagattcacatttgcttttaccatttg |
35411441 |
T |
 |
| Q |
458 |
tcgaagatcagacaggaattgtggaaaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcg |
557 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||| | ||||||||||||||||| |
|
|
| T |
35411442 |
ctgaagatgagacagggattgtggaaaacaagattaggaattgtttggtgatgtttgctagaatcggagttgcatgctctgacgagtttcctgctcatcg |
35411541 |
T |
 |
| Q |
558 |
aatgctaataaaagatgttatagttaagttg |
588 |
Q |
| |
|
|||| | |||||||||||||| ||||||||| |
|
|
| T |
35411542 |
aatgttgataaaagatgttatcgttaagttg |
35411572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 258 - 620
Target Start/End: Original strand, 35386596 - 35386958
Alignment:
| Q |
258 |
aaaagagtacggaacaggtgttccagtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaat |
357 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| |
|
|
| T |
35386596 |
aaaagagtacggagaaggtgttccagtatcaccaaagggagatatctacagctttgggattcttctactagagatgttcaccggaaagagaccaacaaat |
35386695 |
T |
 |
| Q |
358 |
agtatattttgtgagaatttaagcctacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgtcgtttg |
457 |
Q |
| |
|
| | |||| ||||| ||||| || || | || || ||||| |||||| | |||| ||||||||||||||| || | |||||| | | |||| |
|
|
| T |
35386696 |
aacaacttttctgagagattaagtctgcataaattctgcaaaataaaaattccagaagcaatccttgagatagtagattctcaattgctttttccatttg |
35386795 |
T |
 |
| Q |
458 |
tcgaagatcagacaggaattgtggaaaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcg |
557 |
Q |
| |
|
|||||| ||| || ||||||||||||||||||| || |||||||||||||||||| ||||||||| ||||||||| ||||| | || ||||||| |
|
|
| T |
35386796 |
ctgaagatgagatggggattgtggaaaacaagattaggaattgtttggtgatgtttgctgcaattggagtcgcatgttctaaagaggtcactactcatcg |
35386895 |
T |
 |
| Q |
558 |
aatgctaataaaagatgttatagttaagttgaatgaaatcaaatcaaagtttccatgctagga |
620 |
Q |
| |
|
|||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
35386896 |
aatgttgataaaagatgttatagttaagttgaatcaaatcaaatcaaagtttccatgctagga |
35386958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 283 - 588
Target Start/End: Original strand, 35426021 - 35426326
Alignment:
| Q |
283 |
gtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatagtatattttgtgagaatttaagcc |
382 |
Q |
| |
|
||||||||||||||||||||||| |||| ||| ||| |||||||||||||||| || |||||||||||||| ||| || |||| |||||||||||| |
|
|
| T |
35426021 |
gtatcaccacagggagatatctatagctatggaattgttctgttagagatgcttactggaaagagaccaacagataacatgttttatgagaatttaagtt |
35426120 |
T |
 |
| Q |
383 |
tacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgtcgtttgtcgaagatcagacaggaattgtgga |
482 |
Q |
| |
|
||||| | || ||||| |||| |||| |||||||||| ||||| |||| || | | ||||||||||| |||| |||||||| ||| | || |||| |
|
|
| T |
35426121 |
tacacaaattctgtaagatgagaattcctgaaggaattcttgatgtagtggattcatgcttgcttatgtcatttgctgaagatcaaacacaagttatgga |
35426220 |
T |
 |
| Q |
483 |
aaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcgaatgctaataaaagatgttatagtt |
582 |
Q |
| |
|
|||||| || || ||||||| ||||||||||||| ||| ||| ||||||||||| |||| |||||| |||| ||||||| | |||||||||||||||| |
|
|
| T |
35426221 |
aaacaacataaaggagtgtttagtgatgtttgctaaaataggaattgcatgttctgaagaatttcctactcagagaatgctcacaaaagatgttatagtt |
35426320 |
T |
 |
| Q |
583 |
aagttg |
588 |
Q |
| |
|
|||||| |
|
|
| T |
35426321 |
aagttg |
35426326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 258 - 588
Target Start/End: Original strand, 35755427 - 35755757
Alignment:
| Q |
258 |
aaaagagtacggaacaggtgttccagtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaat |
357 |
Q |
| |
|
||||||||| ||| |||||| ||| |||||||| |||||||||| ||||||| ||||||||| ||||| || ||||| ||||||||||||||||| || |
|
|
| T |
35755427 |
aaaagagtatggagcaggtggtccggtatcaccggagggagatatttacagctatgggattctgctgttggaaatgcttaccggaaagagaccaacagat |
35755526 |
T |
 |
| Q |
358 |
agtatattttgtgagaatttaagcctacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgtcgtttg |
457 |
Q |
| |
|
| || |||| ||||||| ||| |||||| | || ||||| |||| |||| |||||| ||| |||||| | || || |||| ||||| | || | |
|
|
| T |
35755527 |
aacatgttttatgagaatctaactctacacaaattctgtaagatgagaattcctgaagaaattcttgaggttgtagattcccgttgccttattccattgg |
35755626 |
T |
 |
| Q |
458 |
tcgaagatcagacaggaattgtggaaaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcg |
557 |
Q |
| |
|
| |||||||||||| || ||||||||||||| || || ||||| | ||||||||||||| ||| ||||||||||||||| |||| |||||| |||| | |
|
|
| T |
35755627 |
ttgaagatcagacacgagttgtggaaaacaacataaaggagtgtctagtgatgtttgctaaaataggagttgcatgttctgaagaatttcctactcagag |
35755726 |
T |
 |
| Q |
558 |
aatgctaataaaagatgttatagttaagttg |
588 |
Q |
| |
|
|||||| | ||||||||||||| |||||||| |
|
|
| T |
35755727 |
aatgctcacaaaagatgttataattaagttg |
35755757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 283 - 588
Target Start/End: Original strand, 35377062 - 35377367
Alignment:
| Q |
283 |
gtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatagtatattttgtgagaatttaagcc |
382 |
Q |
| |
|
||||||||||||||||||||||| |||| ||| |||||||||||||||||||| || |||||||||||||| ||| || |||||||||||| ||||| |
|
|
| T |
35377062 |
gtatcaccacagggagatatctatagctatggaattcttctgttagagatgcttactggaaagagaccaacagataacatcttttgtgagaatctaagct |
35377161 |
T |
 |
| Q |
383 |
tacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgtcgtttgtcgaagatcagacaggaattgtgga |
482 |
Q |
| |
|
||||| | |||||||| ||||||||| | |||||||| ||||| ||||| || | | | |||||| |||| ||||| |||||||| ||| ||||||| |
|
|
| T |
35377162 |
tacacaaattttgtaagatgaaaattccagaaggaattcttgatatagtggatccatgcttgcttgtgtcatttgttgaagatcaaacaaaggttgtgga |
35377261 |
T |
 |
| Q |
483 |
aaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcgaatgctaataaaagatgttatagtt |
582 |
Q |
| |
|
|| | || || ||||| | ||||||||||||| || ||| ||||||||||| |||| || ||| |||| ||||||| | ||||||| ||||||| |
|
|
| T |
35377262 |
aagtagcataaaggagtgtctagtgatgtttgctaatataggaattgcatgttctgaagaattccctactcagagaatgctcacaaaagatattatagtg |
35377361 |
T |
 |
| Q |
583 |
aagttg |
588 |
Q |
| |
|
|||||| |
|
|
| T |
35377362 |
aagttg |
35377367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 35386341 - 35386435
Alignment:
| Q |
13 |
attcttggagccaccgagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaaagttcttaa |
107 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
35386341 |
attcttggaaccacagagcattcaagtaaagatcaagttatttcctctactattaaaggaactataggatatattcctcctggtaaagttcttaa |
35386435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 272 - 471
Target Start/End: Original strand, 35367462 - 35367661
Alignment:
| Q |
272 |
caggtgttccagtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatagtatattttgtga |
371 |
Q |
| |
|
|||||||||||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| || ||||| || |
|
|
| T |
35367462 |
caggtgttccagtatctccacagggagatgtttacagctttgggattctactgttagagatgctcactggaaagagaccaacagatagcatgttttgcga |
35367561 |
T |
 |
| Q |
372 |
gaatttaagcctacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgtcgtttgtcgaagatcagaca |
471 |
Q |
| |
|
|||| | ||||| ||| | || ||||| ||||||||| | | || ||| ||||||||||| || || |||||||||| | ||| | ||||||||||| |
|
|
| T |
35367562 |
gaatcttagccttcacaaattctgtaagatgaaaattcccgtagaaattcttgagatagtggattcacatttgcttatgccatttcttaaagatcagaca |
35367661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 35411002 - 35411095
Alignment:
| Q |
13 |
attcttggagccaccgagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaaagttctta |
106 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
35411002 |
attcttggaaccacagagcattcaagtaaagatcaagttattttttctacaattaaaggaactataggatatattcctcctggtaaagctctta |
35411095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 35376760 - 35376833
Alignment:
| Q |
32 |
attcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaaagttctt |
105 |
Q |
| |
|
||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
35376760 |
attcaagtaaaaatcaagttatttcctccacaattaaaggaactataggatatattcctcctggtaaagttctt |
35376833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 35424019 - 35424092
Alignment:
| Q |
32 |
attcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaaagttctt |
105 |
Q |
| |
|
||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
35424019 |
attcaagtaaaaatcaagttatttcctccacaattaaaggaactataggatatattcctcctggtaaagttctt |
35424092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 35755143 - 35755235
Alignment:
| Q |
13 |
attcttggagccaccgagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaaagttctt |
105 |
Q |
| |
|
|||| |||||| || || |||||||||||||||||||| | ||||||||||||||| ||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
35755143 |
attcatggagctacagaacattcaagtaaagatcaagttaattcctctacaattaagggaactataggatatgttcctcctggtaaagttctt |
35755235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 475 - 620
Target Start/End: Complemental strand, 23936012 - 23935870
Alignment:
| Q |
475 |
attgtggaaaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcgaatgctaataaaagatg |
574 |
Q |
| |
|
||||||||||||||||||| | || ||||||||||||||||||||||| |||||||| || ||| | | |||||| | |||| |||||||||| |
|
|
| T |
23936012 |
attgtggaaaacaagattaggaggtttttggtgatgtttgctagaattgaagttgcatttt---aagtgccccttgctcaacaaatggccataaaagatg |
23935916 |
T |
 |
| Q |
575 |
ttatagttaagttgaatgaaatcaaatcaaagtttccatgctagga |
620 |
Q |
| |
|
||| ||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
23935915 |
ttacagttaagttgagtgaaataaaatcaaagtttccatgctagga |
23935870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 35367189 - 35367281
Alignment:
| Q |
13 |
attcttggagccaccgagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaaagttctt |
105 |
Q |
| |
|
||||||||| ||| || |||||||||||||||||||| | ||| || |||||||| ||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
35367189 |
attcttggaaccagagaccattcaagtaaagatcaagttaattcttccacaattaagggaactataggatatgttcctcctggtaaagttctt |
35367281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 35367680 - 35367763
Alignment:
| Q |
505 |
gtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcgaatgctaataaaagatgttatagttaagttg |
588 |
Q |
| |
|
||||||||||||| ||| |||||||||||||| |||| || ||| ||||||||||| | |||||| |||||| ||| |||||| |
|
|
| T |
35367680 |
gtgatgtttgctaaaataggagttgcatgttccgaagaattccctactcatcgaatgttgataaaaaatgttacagtgaagttg |
35367763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 144; Significance: 2e-75; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 260 - 587
Target Start/End: Complemental strand, 10415281 - 10414954
Alignment:
| Q |
260 |
aagagtacggaacaggtgttccagtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatag |
359 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
10415281 |
aagagtacggaacaggtgttccagtatcaccacagggagatatctatagctttgggattcttctgttagagatgctcactggaaagagaccaacaaataa |
10415182 |
T |
 |
| Q |
360 |
tatattttgtgagaatttaagcctacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgtcgtttgtc |
459 |
Q |
| |
|
|| |||| ||||| | ||| ||||| || || || |||||||||||| | ||||||||||| |||||||| || || || ||| || | |||| | |
|
|
| T |
10415181 |
catgttttctgagagtcaaagtctacatgaattctgcaaaatgaaaattccagaaggaatcctcgagatagtagattcacaattacttttgccatttgcc |
10415082 |
T |
 |
| Q |
460 |
gaagatcagacaggaattgtggaaaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcgaa |
559 |
Q |
| |
|
|||| | |||| || ||||||||||| |||||||| ||||||||||||||||||| | ||| ||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
10415081 |
gaagttgagacggggattgtggaaaataagattaagaagtgtttggtgatgtttggtgcaatcggagttgcatgttctgaagaagttccttctcatcgaa |
10414982 |
T |
 |
| Q |
560 |
tgctaataaaagatgttatagttaagtt |
587 |
Q |
| |
|
|| | |||||||||||||||| |||||| |
|
|
| T |
10414981 |
tgttgataaaagatgttatagataagtt |
10414954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 10415548 - 10415370
Alignment:
| Q |
13 |
attcttggagccaccgagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaaagttcttaa----- |
107 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||| |
|
|
| T |
10415548 |
attcttggagccacagagcattcaagtaaagatcaagtcatttcctctactattaaaggaactataggatatattcctactggtaaagctcttaacttat |
10415449 |
T |
 |
| Q |
108 |
atccattaatagttactatctttcagaaatttagcattgctaatttattattatttaaattagttatgaccatcaatgt |
186 |
Q |
| |
|
||||||| | |||| || | || |||||||||||| |||||||||||| ||||||| || || ||||||| ||||||| |
|
|
| T |
10415448 |
atccatttttggttagtacccttaagaaatttagcaatgctaatttattgttatttatatcagatatgaccctcaatgt |
10415370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 272 - 587
Target Start/End: Complemental strand, 10420155 - 10419840
Alignment:
| Q |
272 |
caggtgttccagtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatagtatattttgtga |
371 |
Q |
| |
|
|||||||||||||||| || ||||||||| | ||||||||||||||||| |||||||||||||||| |||||||||||||| ||| || ||| | | |
|
|
| T |
10420155 |
caggtgttccagtatctccccagggagatgtttacagctttgggattctcttgttagagatgctcactggaaagagaccaacagataacatgtttagcca |
10420056 |
T |
 |
| Q |
372 |
gaatttaagcctacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgtcgtttgtcgaagatcagaca |
471 |
Q |
| |
|
|||| | ||||| ||| | || ||||| ||||||||| ||| || ||| ||||||||||| || || |||||||||| | ||| ||||||||||| |
|
|
| T |
10420055 |
gaatcttagccttcacaaattctgtaagatgaaaattcctgtagaaattcttgagatagtggattcacatttgcttatgccatttcctaaagatcagaca |
10419956 |
T |
 |
| Q |
472 |
ggaattgtggaaaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcgaatgctaataaaag |
571 |
Q |
| |
|
||| |||||| || ||||| ||||| | |||||||||||| ||| |||||||||||||| |||| || || |||||||| |||| | ||||| |
|
|
| T |
10419955 |
ctaatgacggaaaaaaacattaaggagtgtctagtgatgtttgctgaaataggagttgcatgttccgaagaattcgctactcatcgagtgctcacaaaag |
10419856 |
T |
 |
| Q |
572 |
atgttatagttaagtt |
587 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
10419855 |
atgttatagtgaagtt |
10419840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 10409853 - 10409759
Alignment:
| Q |
11 |
taattcttggagccaccgagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaaagttctt |
105 |
Q |
| |
|
|||||| |||||| || || |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
10409853 |
taattcgtggagctacagaacattcaagtaaagatcaagttatttcctctacaattaagggaactataggatatgttcctcccggtaaagttctt |
10409759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 10420435 - 10420343
Alignment:
| Q |
13 |
attcttggagccaccgagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaaagttctt |
105 |
Q |
| |
|
||||||||| ||| || |||||||||||||||||||| | ||| || ||||| || |||| ||||||||| |||||||||||||||||||| |
|
|
| T |
10420435 |
attcttggaaccagagaccattcaagtaaagatcaagttaattcttccacaatcaagggaagtataggatatgttcctcctggtaaagttctt |
10420343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 115; Significance: 4e-58; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 282 - 628
Target Start/End: Original strand, 30626650 - 30626996
Alignment:
| Q |
282 |
agtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatagtatattttgtgagaatttaagc |
381 |
Q |
| |
|
||||||||| || || ||||||||||||| ||||||||||| ||||| |||||||| ||||| |||||||| ||||| || |||| || | | | || |
|
|
| T |
30626650 |
agtatcacctcatggcgatatctacagctacgggattcttctcttagaaatgctcactggaaaaagaccaacaaatagcatgttttctggaagtctcagt |
30626749 |
T |
 |
| Q |
382 |
ctacacgatttttgtaaaatgaaaatttctgaaggaatccttgagatagtcgaccaacgtttgcttatgtcgtttgtcgaagatcagacaggaattgtgg |
481 |
Q |
| |
|
||||| | || ||||| |||||| || | || |||||| |||||||||| || || ||||||| || | |||| |||||| ||||||| ||||||| |
|
|
| T |
30626750 |
ctacatgcattctgtaagatgaaagttccagatggaatctttgagatagtagattcacatttgcttttgccatttgctgaagatgagacagggattgtgg |
30626849 |
T |
 |
| Q |
482 |
aaaacaagattaaaaagtgtttggtgatgtttgctagaattggagttgcatgttctcaagagtttcctgctcatcgaatgctaataaaagatgttatagt |
581 |
Q |
| |
|
|||||||||||| || || || ||||||||||||| |||||||||||||||||| |||||||||| || ||||||||| |||||||||||||||| |
|
|
| T |
30626850 |
aaaacaagattaggaattgcttagtgatgtttgctataattggagttgcatgttcagaagagtttccatctaatcgaatgccgataaaagatgttatagc |
30626949 |
T |
 |
| Q |
582 |
taagttgaatgaaatcaaatcaaagtttccatgctaggattcgttgc |
628 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
30626950 |
aaagttgaatgaaatcaaatcaatgtttccatgctaggatccgttgc |
30626996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 415 - 628
Target Start/End: Original strand, 30663709 - 30663922
Alignment:
| Q |
415 |
ggaatccttgagatagtcgaccaacgtttgcttatgtcgtttgtcgaagatcagacaggaattgtggaaaacaagattaaaaagtgtttggtgatgtttg |
514 |
Q |
| |
|
|||||| |||||||||| || || ||||||| || | |||| |||||| ||||||| ||||||||||||||||||| || || || |||||||||| |
|
|
| T |
30663709 |
ggaatctttgagatagtagattcacatttgcttttgccatttgctgaagatgagacagggattgtggaaaacaagattaggaattgcttagtgatgtttg |
30663808 |
T |
 |
| Q |
515 |
ctagaattggagttgcatgttctcaagagtttcctgctcatcgaatgctaataaaagatgttatagttaagttgaatgaaatcaaatcaaagtttccatg |
614 |
Q |
| |
|
||| ||||||||||||||||||| |||||||||| || ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
30663809 |
ctataattggagttgcatgttctgaagagtttccatcttatcgaatgccgataaaagatgttatagcaaagttgaatgaaatcaaatcaatgtttccatg |
30663908 |
T |
 |
| Q |
615 |
ctaggattcgttgc |
628 |
Q |
| |
|
| ||||| |||||| |
|
|
| T |
30663909 |
cgaggatccgttgc |
30663922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 415 - 628
Target Start/End: Original strand, 30672389 - 30672602
Alignment:
| Q |
415 |
ggaatccttgagatagtcgaccaacgtttgcttatgtcgtttgtcgaagatcagacaggaattgtggaaaacaagattaaaaagtgtttggtgatgtttg |
514 |
Q |
| |
|
|||||| |||||||||| || || ||||||| || | |||| |||||| ||||||| ||||||||||||||||||| || || || |||||||||| |
|
|
| T |
30672389 |
ggaatctttgagatagtagattcacatttgcttttgccatttgctgaagatgagacagggattgtggaaaacaagattaggaattgcttagtgatgtttg |
30672488 |
T |
 |
| Q |
515 |
ctagaattggagttgcatgttctcaagagtttcctgctcatcgaatgctaataaaagatgttatagttaagttgaatgaaatcaaatcaaagtttccatg |
614 |
Q |
| |
|
||| ||||||||||||||||||| |||||||||| || ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
30672489 |
ctataattggagttgcatgttctgaagagtttccatcttatcgaatgccgataaaagatgttatagcaaagttgaatgaaatcaaatcaatgtttccatg |
30672588 |
T |
 |
| Q |
615 |
ctaggattcgttgc |
628 |
Q |
| |
|
| ||||| |||||| |
|
|
| T |
30672589 |
cgaggatccgttgc |
30672602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 421 - 485
Target Start/End: Complemental strand, 28160504 - 28160440
Alignment:
| Q |
421 |
cttgagatagtcgaccaacgtttgcttatgtcgtttgtcgaagatcagacaggaattgtggaaaa |
485 |
Q |
| |
|
||||||||||| |||||| ||||||||||| ||| || | ||||||||||||||||||||||||| |
|
|
| T |
28160504 |
cttgagatagtggaccaatgtttgcttatgccgtatggccaagatcagacaggaattgtggaaaa |
28160440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 282 - 359
Target Start/End: Original strand, 30663603 - 30663680
Alignment:
| Q |
282 |
agtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatag |
359 |
Q |
| |
|
||||||||| || || ||||||||||||| || |||||||| ||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
30663603 |
agtatcacctcatggtgatatctacagctacggaattcttctattagaaatgctcactggaaagagaccaacaaatag |
30663680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 282 - 359
Target Start/End: Original strand, 30672283 - 30672360
Alignment:
| Q |
282 |
agtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatag |
359 |
Q |
| |
|
||||||||| || || ||||||||||||| || |||||||| ||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
30672283 |
agtatcacctcatggtgatatctacagctacggaattcttctattagaaatgctcactggaaagagaccaacaaatag |
30672360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 30626398 - 30626485
Alignment:
| Q |
11 |
taattcttggagccaccgagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaa |
98 |
Q |
| |
|
|||||| ||||||||| | |||||||| ||||||||| | ||| || |||||||| ||||| ||||||||| ||||||||||||| |
|
|
| T |
30626398 |
taattcatggagccacagcatattcaagtgtagatcaagttaattcgtccacaattaagggaactataggatatgttcctcctggtaa |
30626485 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 30663349 - 30663436
Alignment:
| Q |
11 |
taattcttggagccaccgagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaa |
98 |
Q |
| |
|
|||||| ||||||||| | |||||||| ||||||||| | ||| || |||||||| ||||| ||||||||| ||||||||||||| |
|
|
| T |
30663349 |
taattcatggagccacagcatattcaagtgtagatcaagttaattcgtccacaattaagggaactataggatatgttcctcctggtaa |
30663436 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 30672029 - 30672116
Alignment:
| Q |
11 |
taattcttggagccaccgagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaa |
98 |
Q |
| |
|
|||||| ||||||||| | |||||||| ||||||||| | ||| || |||||||| ||||| ||||||||| ||||||||||||| |
|
|
| T |
30672029 |
taattcatggagccacagcatattcaagtgtagatcaagttaattcgtccacaattaagggaactataggatatgttcctcctggtaa |
30672116 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 68; Significance: 5e-30; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 296 - 431
Target Start/End: Original strand, 15294352 - 15294487
Alignment:
| Q |
296 |
gagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatagtatattttgtgagaatttaagcctacacgatttttg |
395 |
Q |
| |
|
||||||||||||||| ||||||||| ||||| || ||||||||||||||||||||||| ||||| || || ||||||||| |||| ||||| | ||||| |
|
|
| T |
15294352 |
gagatatctacagctatgggattctgctgttggaaatgctcaccggaaagagaccaacaaatagcatgttctgtgagaatctaagtctacagaaattttg |
15294451 |
T |
 |
| Q |
396 |
taaaatgaaaatttctgaaggaatccttgagatagt |
431 |
Q |
| |
|
||| ||||||||| | |||||||| ||||||||||| |
|
|
| T |
15294452 |
taagatgaaaattccagaaggaattcttgagatagt |
15294487 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 296 - 431
Target Start/End: Original strand, 15474721 - 15474856
Alignment:
| Q |
296 |
gagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaaccaatagtatattttgtgagaatttaagcctacacgatttttg |
395 |
Q |
| |
|
||||||||||||||| ||||||||| ||||| || ||||||||||||||||||||||| ||||| || || ||||||||| |||| ||||| | ||||| |
|
|
| T |
15474721 |
gagatatctacagctatgggattctgctgttggaaatgctcaccggaaagagaccaacaaatagcatgttctgtgagaatctaagtctacagaaattttg |
15474820 |
T |
 |
| Q |
396 |
taaaatgaaaatttctgaaggaatccttgagatagt |
431 |
Q |
| |
|
||| ||||||||| | |||||||| ||||||||||| |
|
|
| T |
15474821 |
taagatgaaaattccagaaggaattcttgagatagt |
15474856 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 15294093 - 15294170
Alignment:
| Q |
28 |
gagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaaagttctt |
105 |
Q |
| |
|
|||||||||||||||||| |||| ||| |||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
15294093 |
gagcattcaagtaaagataaagttattgcctctaagattaaaggaactataggatatattcctcctggtaaagttctt |
15294170 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 15474462 - 15474539
Alignment:
| Q |
28 |
gagcattcaagtaaagatcaagtaatttcctctacaattaaaggaacaataggatatattcctcctggtaaagttctt |
105 |
Q |
| |
|
|||||||||||||||||| |||| ||| |||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
15474462 |
gagcattcaagtaaagataaagttattgcctctaagattaaaggaactataggatatattcctcctggtaaagttctt |
15474539 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 13564902 - 13565024
Alignment:
| Q |
328 |
gagatgctcaccggaaagagaccaaccaatagtatattttgtgagaatttaagcctacacgatttttgtaaaatgaaaatttctgaaggaatccttgaga |
427 |
Q |
| |
|
|||||||||||||||||||||||||| ||| || |||| || | ||| |||||| ||| ||||| ||||||||| | ||||||||||||| || |
|
|
| T |
13564902 |
gagatgctcaccggaaagagaccaacggatatcatgttttccgacggtctaaatctacacaattactgtaagatgaaaattccagaaggaatccttgcga |
13565001 |
T |
 |
| Q |
428 |
tagtcgaccaacgtttgcttatg |
450 |
Q |
| |
|
|||| || ||||||||||||||| |
|
|
| T |
13565002 |
tagtggatcaacgtttgcttatg |
13565024 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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