View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17881_low_8 (Length: 216)
Name: NF17881_low_8
Description: NF17881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17881_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 18724623 - 18724435
Alignment:
| Q |
12 |
gaagaaaattattcggtttgggagtttttccacttcttgataaaaatcttcaagcaattctccaaccattgcaccgagatctgcaataatttcttgcctg |
111 |
Q |
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| T |
18724623 |
gaagaaaattattcggtttgggagtttttccacttcttgataaaaatcttcaagcaattctcctaccattgcaccgagatctgcaataatttcttgcctg |
18724524 |
T |
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| Q |
112 |
tgtgtttgagaccttattcttgaaatatatttgtttgctgttggccagttcatgctaccaacaacagcagcgacagatggacttgaatc |
200 |
Q |
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| T |
18724523 |
tgtgtttgagaccttattcttgaaatatatttgtttgctgttggccagttcatgctaccaacaacagcagcgacagatggacttgaatc |
18724435 |
T |
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