View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17882_low_19 (Length: 320)
Name: NF17882_low_19
Description: NF17882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17882_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 8 - 305
Target Start/End: Complemental strand, 42021093 - 42020796
Alignment:
| Q |
8 |
gacatcatcagaatcagaagtgatgtttatgatgaaaccttgtccaatgagtttcttggtccaagttagtgtgatgagaaattgttgttgaattgagata |
107 |
Q |
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| T |
42021093 |
gacataatcagaatcagaagtgatgtttatgatgaaaccttgtccaatgagtttcttggtccaagttagtgtgatgagaaattgttgttgaattgagata |
42020994 |
T |
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| Q |
108 |
aagttgagtttgtatatgcaagtaactgaattttgaattgaaaggttattgagttttggaatgattgaatctgaaggtcttgaacaatataaatcagata |
207 |
Q |
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| T |
42020993 |
aagttgagtttgtatatgcaagtaactgaattttgaattgaaaggttattgagttttggaatgattgaatttgaaggtcttgaacaatataaatcagata |
42020894 |
T |
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| Q |
208 |
ctctaatagcatgttcattgtaacaagatgttatgcctctcataattttttgaacaaagaaaaataaaatatgtgagtttgtggttcagaaataaaac |
305 |
Q |
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| T |
42020893 |
ctctaatagcatgttcattgtaacaagatgttatgcctctcataattttttgaacaaagaaaaataaaatatgtgagtttgtggttcagaaataaaac |
42020796 |
T |
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