View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17882_low_32 (Length: 246)
Name: NF17882_low_32
Description: NF17882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17882_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 32285285 - 32285055
Alignment:
| Q |
1 |
caaggactcactcttctaaaagtttaagcttttaagtttaaggttttaaagttctaaaacaatgaagagacaaaatatgaaccattcgtatttgattctt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
32285285 |
caaggactcactcttctaaaagtttaagcttttaagtttaaggttttaaagttctaaaacaatgaagagacaaaatatgaaccatttgtatttgattctt |
32285186 |
T |
|
| Q |
101 |
tatcaatctgtgagttctaggaagttgaaaatggagctgcagttgcttctgtgacagaaatttcagaagttcagcaaaaagttgttggagaagttgacca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32285185 |
tatcaatctgtgagttctaggaagttgaaaatggagctgcagttgcttctgtgacagaaatttcagaagttcagcaaaaagttgttggagaagttgacca |
32285086 |
T |
|
| Q |
201 |
agaaacagaagcatcccatccaagagttttc |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
32285085 |
agaaacagaagcatcccatccaagagttttc |
32285055 |
T |
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