View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17883_high_13 (Length: 405)
Name: NF17883_high_13
Description: NF17883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17883_high_13 |
 |  |
|
| [»] scaffold0286 (1 HSPs) |
 |  |  |
|
| [»] scaffold0189 (1 HSPs) |
 |  |  |
|
| [»] scaffold0057 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 20)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 350
Target Start/End: Original strand, 9431172 - 9431254
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
9431172 |
aagagtagtgatatttgtacacattttttaaacaatttttatgacaattttgtttttctctattttgattggtcaaaatcaat |
9431254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 31824961 - 31825029
Alignment:
| Q |
270 |
gagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattg |
338 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||||||||| |
|
|
| T |
31824961 |
gagtagtgatatttgtacaccttttctaaacaacttccatgacaactttgtttttctctattttgattg |
31825029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 350
Target Start/End: Complemental strand, 45081584 - 45081501
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||| | |||||| ||||||| || ||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
45081584 |
aagagtagtgatatttgtatatctttttctaaacaacttccataacaattttgtttttctctattttgattggtcaaaatcaat |
45081501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 1158223 - 1158304
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||||||||||| |||| || || |||||||| ||||||||| ||||||||||||| | ||||||||| |
|
|
| T |
1158223 |
agagtagtgatatttgtacaccttttctaaataactttcatgacaactttgtttttttctattttgattgatcaaaatcaat |
1158304 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 7376704 - 7376625
Alignment:
| Q |
271 |
agtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||| |||| ||||| ||||||| || ||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
7376704 |
agtagtgatatttatacatcttttctaaacaacttttatgacaattttatttttctctattttgattggtcaaaatcaat |
7376625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 11812020 - 11812070
Alignment:
| Q |
129 |
gacctcaattatactaactagtgtgattaactaactaactagagtgagtaa |
179 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
11812020 |
gacctcaattatactaaccagtgcgattaactaactaactagagtgagtaa |
11812070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 12659335 - 12659253
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||||| ||| || |||| || ||||| || ||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
12659335 |
agagtagtgatatttgtacacctctttctatacaacttccatgataactttgtttttctctatgttgattggtcaaaatcaat |
12659253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 12960122 - 12960040
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||| |||||||| |||||| ||||||| || ||||||| ||| ||||||||||||||||||| | ||||||||| |
|
|
| T |
12960122 |
agagtagtgatctttgtacatctttttctaaacaacttctatgacaactttatttttctctattttgattgatcaaaatcaat |
12960040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 40608696 - 40608615
Alignment:
| Q |
270 |
gagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||| ||||| | || ||| |||| ||||| ||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
40608696 |
gagtagtgatacttgtatatctctttctaaataatttttatgacaattttgtttttctttattttgattggtcaaaatcaat |
40608615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 346
Target Start/End: Original strand, 34299292 - 34299368
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaat |
346 |
Q |
| |
|
|||||||||||||||||||| | ||| ||||||| || ||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
34299292 |
aagagtagtgatatttgtac-ctctttctaaacaacttctatgacaattttgttttt-tctattttgattggtcaaaat |
34299368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 40997843 - 40997761
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||| ||||||| ||||||| || ||| |||| ||||| |||| ||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
40997843 |
agagcagtgatacttgtacatctctttctaaataatttctatgataattttgtttttctctattttaattggtcaaaatcaat |
40997761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 5567634 - 5567581
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactca |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| ||||| ||||||||||| |
|
|
| T |
5567634 |
tcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactca |
5567581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 6428949 - 6428856
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcatagagatacatattagaataaatagatttgattaaaagat |
96 |
Q |
| |
|
||||||||||||| |||| || || |||||||||| |||||| |||||||||| ||| | ||| |||| | |||||||||||||||||||| |
|
|
| T |
6428949 |
tcatagatgtaagtaagatagcaaacataagagtactcatgtgagagatactcaaagaaactcattgtagagtgaatagatttgattaaaagat |
6428856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 30224438 - 30224385
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactca |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| ||||| ||||||||||| |
|
|
| T |
30224438 |
tcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactca |
30224385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 36535874 - 36535922
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagat |
51 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| |||||| |||||| |
|
|
| T |
36535874 |
tcatagatgtaagcaagatagcaagcataagagtactcatgtgggagat |
36535922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 30608599 - 30608674
Alignment:
| Q |
270 |
gagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaa |
345 |
Q |
| |
|
||||||||||||||||||| || |||| |||| | ||||||| ||||||||||| | |||||||||||||||| |
|
|
| T |
30608599 |
gagtagtgatatttgtacaactcttttgtacaacctttatgacaactttgtttttctatcttttgattggtaaaaa |
30608674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 3375457 - 3375511
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcat |
57 |
Q |
| |
|
||||||||||||| |||| || ||||| ||||||| |||||| |||||||||||| |
|
|
| T |
3375457 |
tcatagatgtaagtaagatagcaagcaaaagagtactcatgtgggagatactcat |
3375511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 31032038 - 31032084
Alignment:
| Q |
14 |
agcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
||||||| || ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
31032038 |
agcaagaaagcaagcataagagtactcatgtgggagatactcataga |
31032084 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 350
Target Start/End: Complemental strand, 38504313 - 38504272
Alignment:
| Q |
309 |
tgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
38504313 |
tgacaattttgtttttctctcttttgattggtcaaaaacaat |
38504272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 350
Target Start/End: Complemental strand, 43587784 - 43587743
Alignment:
| Q |
309 |
tgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||| |||| |
|
|
| T |
43587784 |
tgacaactttgtttttctctcttttgattggtaaaaagcaat |
43587743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 39744475 - 39744563
Alignment:
| Q |
262 |
tattttaagagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
39744475 |
tattttatgagtagtgatatttgtacaccttttctaaacaactttcatgacaactttgtttttctctattttgattggtcaaaatcaat |
39744563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 14797538 - 14797621
Alignment:
| Q |
267 |
taagagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||||| |
|
|
| T |
14797538 |
taagagtagtgatatttgtacaccttttttaaacaatttttatgacaactttgtttttttctattttgattggacaaaatcaat |
14797621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 13465963 - 13466040
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaat |
346 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||| || |||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
13465963 |
agagtagtgatatttgtataccttttctaaacaacttccatgacaactttgtttttctctattttgattggtcaaaat |
13466040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 350
Target Start/End: Complemental strand, 3585811 - 3585728
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||| || ||||||| ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
3585811 |
aagagtagtgatatttgtacatctttttctaaacaacttttatgacaactttgtttttctctattttgattgatcaaaatcaat |
3585728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 3961219 - 3961277
Alignment:
| Q |
100 |
aaatgagtacatgtgtggtcttatttatagacctcaattatactaactagtgtgattaa |
158 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3961219 |
aaatgagtacatatatggtcttatttatagacctcaattatactaactaatgtgattaa |
3961277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 39737576 - 39737657
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||| |||| || ||||||||||| |||||| |||||| ||||||||| |
|
|
| T |
39737576 |
agagtagtgatatttgtacaccttttctaaataatttttatgataactttgtttttctttattttaattggttaaaatcaat |
39737657 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 11742007 - 11741925
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||| |||| ||| |||||| || ||||||| ||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
11742007 |
agagtagtgatatttgtatacctctttctaaacatcttctatgacaactttctttttctctattttgattggtcaaaatcaat |
11741925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 43356502 - 43356424
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaat |
346 |
Q |
| |
|
||||| |||||||||| |||| |||| ||||||| || |||||||| ||||||||| ||||||||||||||| ||||| |
|
|
| T |
43356502 |
aagagcagtgatatttatacatattttctaaacaactttcatgacaactttgtttttttctattttgattggtcaaaat |
43356424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 350
Target Start/End: Original strand, 41715350 - 41715391
Alignment:
| Q |
309 |
tgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
41715350 |
tgacaattttgtttttctctattttgattggtcaaaatcaat |
41715391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 350
Target Start/End: Complemental strand, 6746404 - 6746320
Alignment:
| Q |
267 |
taagagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||||||| || ||| | ||||| || ||||||| || |||||||| ||||||||||||| ||||||||| |
|
|
| T |
6746404 |
taagagtagtgatatttgtacaactctttatgaacaacttcaatgacaacttggtttttctttattttgattggtcaaaatcaat |
6746320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 29758328 - 29758275
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactca |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| ||||| ||||||||||| |
|
|
| T |
29758328 |
tcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactca |
29758275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28124608 - 28124703
Alignment:
| Q |
1 |
gatcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcatagagatacatattagaataaatagatttgattaaaagat |
96 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| |||||| |||| || | ||||||||||||||| |
|
|
| T |
28124608 |
gatcatagatgtaagcaagagagcaagcataagagtactcatgtgggagatactcatagagatccatattggaatgaaaatatttgattaaaagat |
28124703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28126435 - 28126530
Alignment:
| Q |
1 |
gatcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcatagagatacatattagaataaatagatttgattaaaagat |
96 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| |||||| |||| || | ||||||||||||||| |
|
|
| T |
28126435 |
gatcatagatgtaagcaagagagcaagcataagagtactcatgtgggagatactcatagagatccatattggaatgaaaatatttgattaaaagat |
28126530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 267 - 350
Target Start/End: Complemental strand, 9055452 - 9055369
Alignment:
| Q |
267 |
taagagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| || |||||||| || |||||||||||||||||||||| ||||||||| |
|
|
| T |
9055452 |
taagagtagtgatatttgtacaccttttctaaacaacttccatgacaacttcgtttttctctattttgattggtcaaaatcaat |
9055369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 350
Target Start/End: Original strand, 2756806 - 2756888
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||| |||||||||||||||| |||| || || |||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2756806 |
aagagtagtggtatttgtacaccttttctaaataacttccatgacaactttgtttttctctattttgattggtcaaaatcaat |
2756888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 21037121 - 21037205
Alignment:
| Q |
267 |
taagagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||| || |||||||| ||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
21037121 |
taagagtagtgatatttgtacacctctttctaaacaacttccatgacaactttgtttttctctattttgatcggtcaaaatcaat |
21037205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4895794 - 4895700
Alignment:
| Q |
1 |
gatcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcatagagatacatattagaataaatagatttgattaaaagat |
96 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||| |||| | |||||||||||||||||| |||||| |||| |||| | ||||||||||||| |
|
|
| T |
4895794 |
gatcatagatgtaagcaagagagcaaacataagagtactcatctgggagatactcatagagatccatattggaatgaatata-ttgattaaaagat |
4895700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28014294 - 28014353
Alignment:
| Q |
1 |
gatcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||| |
|
|
| T |
28014294 |
gatcatagatgtaagcaagatagcaagcataagagtgctcatgtgggagatactcataga |
28014353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 20046518 - 20046575
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
|||||||||||||| ||| || ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
20046518 |
tcatagatgtaagcgagatagcaagcataagagtactcatgtgggagatactcataga |
20046575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 3458871 - 3458824
Alignment:
| Q |
101 |
aatgagtacatgtgtggtcttatttatagacctcaattatactaacta |
148 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| | |||||||| |
|
|
| T |
3458871 |
aatgagtacatgtatggtcttatttatagacctcaatcacactaacta |
3458824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 44963371 - 44963318
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactca |
56 |
Q |
| |
|
||||||||||||| |||| || ||||||||||||||||||| ||||||||||| |
|
|
| T |
44963371 |
tcatagatgtaagtaagatagcaagcataagagtattcatgagggagatactca |
44963318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 21153235 - 21153159
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaa |
345 |
Q |
| |
|
||||||||||||| |||||| |||||| |||| || |||||||| |||| |||||||| ||||||||||| |||| |
|
|
| T |
21153235 |
agagtagtgatatatgtacaactttttggtacaactttcatgacaactttgattttctctcttttgattggtcaaaa |
21153159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25471792 - 25471851
Alignment:
| Q |
1 |
gatcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
||||||||||||||| |||| || |||||||||| |||||| || ||||||||| ||||| |
|
|
| T |
25471792 |
gatcatagatgtaagaaagatagcaagcataagattattcacgtgggagatactaataga |
25471851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 29598018 - 29598081
Alignment:
| Q |
26 |
agcataagagtattcatgtaggagatactcatagagatacatattagaat-aaatagatttgat |
88 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||| |||| |||||| || |||||||||| |
|
|
| T |
29598018 |
agcataagagtattcatgtgggagatacccatagagactcatagtagaatgaactagatttgat |
29598081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 41966511 - 41966430
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||| ||| || ||||||||||||| ||||||| || |||||||| |||| |||||| |||| |||| |
|
|
| T |
41966511 |
agagtagtgatatttgaacaactattttaaacaatttttatgacaacttcttttttctcagtttttattggtcaaaaacaat |
41966430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16808599 - 16808694
Alignment:
| Q |
1 |
gatcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcatagagatacatattagaataaatagatttgattaaaagat |
96 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| |||||| |||| || | ||||||||||||||| |
|
|
| T |
16808599 |
gatcatagatgtaagcaagagagcaagcataagagtactcatgtcggagatactcatagagatccatattggaatgaaaatatttgattaaaagat |
16808694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 350
Target Start/End: Original strand, 3605982 - 3606065
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
3605982 |
aagagtagtgatatttgtacatctttttctaaacaatttccatgataactttgtttttctctattttgattggtcaaaatcaat |
3606065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 27810103 - 27810183
Alignment:
| Q |
270 |
gagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||| || |||||||| ||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
27810103 |
gagtagtggtatttgtacaccttttctaaacaacttccatgacaactttgtatttctctattttgattggtcaaaatcaat |
27810183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 30196896 - 30196814
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||| || |||||||| ||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
30196896 |
agagtagtgatatttgtacacctctttctaaacaactttcatgacaactttatttttctctattttgattggtcaaaatcaat |
30196814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 21441818 - 21441738
Alignment:
| Q |
270 |
gagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||| || |||||||| ||||||||| ||||||||||||| | ||||||||| |
|
|
| T |
21441818 |
gagtaatgatatttgtacaccttttctaaacaacttccatgacaactttgtttttttctattttgattgatcaaaatcaat |
21441738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 48941810 - 48941702
Alignment:
| Q |
5 |
atagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcatagagataca-tat-tag-aataaatagatttgattaaaagatacaaa |
101 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||| |||||||||||| | | || ||| ||| ||| |||||||||||||||||||||| | |
|
|
| T |
48941810 |
atagatgtaagcaagagagcaagtataagagtattcatgtgagagatactcatataaactcattatatagaaatgaatagatttgattaaaagatactga |
48941711 |
T |
 |
| Q |
102 |
atgagtaca |
110 |
Q |
| |
|
||||||||| |
|
|
| T |
48941710 |
atgagtaca |
48941702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 17449518 - 17449461
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||||| |||||| ||||||||||||||| |
|
|
| T |
17449518 |
tcatagatgtaagcaagatagcaagcaaaagagtactcatgtgggagatactcataga |
17449461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 24136809 - 24136884
Alignment:
| Q |
270 |
gagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaa |
345 |
Q |
| |
|
|||||||||||||| |||| |||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
24136809 |
gagtagtgatatttatacaactttttagtacaatttttatgacaaatttgtttttctcttatttgattggtaaaaa |
24136884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 350
Target Start/End: Original strand, 30505232 - 30505307
Alignment:
| Q |
276 |
tgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||| || |||||| |||| ||||| ||||||| ||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
30505232 |
tgatatttgtccatctttttctaaataatttttatgacaactttgtttttctttattttgattggtcaaaatcaat |
30505307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 350
Target Start/End: Original strand, 3826708 - 3826785
Alignment:
| Q |
274 |
agtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||| |||||| | ||||| || ||||||| ||| ||||||| ||||||||||||| ||||||||| |
|
|
| T |
3826708 |
agtgatatttgtacaactttttatgaacaacttcaatgacaactttatttttctttattttgattggtcaaaatcaat |
3826785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 5924831 - 5924866
Alignment:
| Q |
25 |
aagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5924831 |
aagcataagagtattcatataggagatactcataga |
5924866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 17309837 - 17309874
Alignment:
| Q |
101 |
aatgagtacatgtgtggtcttatttatagacctcaatt |
138 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17309837 |
aatgagtacatggatggtcttatttatagacctcaatt |
17309874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 27563628 - 27563596
Alignment:
| Q |
308 |
atgacaattttgtttttctctattttgattggt |
340 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |
|
|
| T |
27563628 |
atgacaattttgtttttctctcttttgattggt |
27563596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 350
Target Start/End: Complemental strand, 43358797 - 43358715
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
43358797 |
aagagtagtgatatttgtacatcttttttaaacaatttttatgacaactttgtttttctctattttgattggtcaaaatcaat |
43358715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 36812292 - 36812372
Alignment:
| Q |
270 |
gagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
36812292 |
gagtagtgatatttgtacaccttttctaaacaacttccatgacaactttgtttttctctattttgattggtcaaaatcaat |
36812372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 52518970 - 52518875
Alignment:
| Q |
1 |
gatcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcatagagatacatattagaataaatagatttgattaaaagat |
96 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| | |||||| |||||||||||||||||| |||||| |||| || | ||||||||||||||| |
|
|
| T |
52518970 |
gatcatagatgtaagcaagagagcaagcataagagaactcatgtgggagatactcatagagatccatattggaatgaaaatatttgattaaaagat |
52518875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 48743893 - 48743812
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
48743893 |
agagtagtgatatttgtacagcttttctaaacaacttccatgacaactttgtttttctctattttgattggtcaaaatcaat |
48743812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 55596131 - 55596051
Alignment:
| Q |
270 |
gagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| || |||||||| || |||||||||||||||||||||| ||||||||| |
|
|
| T |
55596131 |
gagtagtgatatttgtacaccttttctaaacaactttcatgacaacttcgtttttctctattttgattggtcaaaatcaat |
55596051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 52520812 - 52520717
Alignment:
| Q |
1 |
gatcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcatagagatacatattagaataaatagatttgattaaaagat |
96 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||||| |||||| |||||||||||||||||| |||||| ||| || | ||||||||||||||| |
|
|
| T |
52520812 |
gatcatagatgtaagaaagagagcaagcataagagtactcatgtgggagatactcatagagatccatattgaaatgaaaatatttgattaaaagat |
52520717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 149174 - 149256
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||| || |||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
149174 |
agagtagtgatatttgtacacctctttctaaacaacttccatgacaactttgtttttctctattttgattgggcaaaatcaat |
149256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 350
Target Start/End: Original strand, 22920159 - 22920240
Alignment:
| Q |
270 |
gagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||| || ||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22920159 |
gagtagtgatatttgtacatctttttctaaacaacttttatgacaactttgtttttctctattttgattggtcaaaatcaat |
22920240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 350
Target Start/End: Complemental strand, 22971640 - 22971559
Alignment:
| Q |
270 |
gagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||| || ||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22971640 |
gagtagtgatatttgtacatctttttctaaacaacttttatgacaactttgtttttctctattttgattggtcaaaatcaat |
22971559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 350
Target Start/End: Original strand, 8719802 - 8719888
Alignment:
| Q |
264 |
ttttaagagtagtgatatttgtacacct-tttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||||| |||| || ||||||||||| || ||||||| |||||||| |||||||||||||||| ||||||||| |
|
|
| T |
8719802 |
ttttaagagtagtgatatttatacatctctttttaaacaacttctatgacaactttgtttt-ctctattttgattggtcaaaatcaat |
8719888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 29406918 - 29407001
Alignment:
| Q |
262 |
tattttaagagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaa |
345 |
Q |
| |
|
||||| |||||||||||||| |||||| || ||| |||| || ||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29406918 |
tatttaaagagtagtgatatatgtacaactctttggtacaactttcatgacaattttggttttctctattttgattggtaaaaa |
29407001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 7040569 - 7040516
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactca |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| ||||| ||||||||||| |
|
|
| T |
7040569 |
tcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactca |
7040516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 346
Target Start/End: Complemental strand, 12241240 - 12241163
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaat |
346 |
Q |
| |
|
|||||||||||||||||||| || |||| |||| | ||||||| ||| ||||||||| ||||||||||||||||| |
|
|
| T |
12241240 |
agagtagtgatatttgtacaactcttttgtacaacctttatgacaactttatttttctctcttttgattggtaaaaat |
12241163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 18656316 - 18656263
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactca |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| ||||| ||||||||||| |
|
|
| T |
18656316 |
tcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactca |
18656263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 389536 - 389623
Alignment:
| Q |
260 |
attattttaagagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaat |
346 |
Q |
| |
|
||||||| ||||||| ||||||||||||| ||||| | ||||| | |||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
389536 |
attatttgaagagtaatgatatttgtacaattttttgtgaacaactgctttgacaactttgtttttctctattttgattggtcaaaat |
389623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 350
Target Start/End: Complemental strand, 25540021 - 25539962
Alignment:
| Q |
291 |
ttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||| ||||||| || ||||||| ||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
25540021 |
ttttctaaacaacttttatgacaactttgtttttttctattttgattggtcaaaatcaat |
25539962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 56074680 - 56074726
Alignment:
| Q |
14 |
agcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
||||||| || ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
56074680 |
agcaagaaagcaagcataagagtactcatgtgggagatactcataga |
56074726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 23564698 - 23564751
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactca |
56 |
Q |
| |
|
|||||||||||||||| | || ||||||||||||| ||||| ||||||||||| |
|
|
| T |
23564698 |
tcatagatgtaagcaaaatagcaagcataagagtactcatgagggagatactca |
23564751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 23566392 - 23566445
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactca |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| |||| ||||||||||| |
|
|
| T |
23566392 |
tcatagatgtaagcaagatagcaagcataagagtacccatgagggagatactca |
23566445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 18395689 - 18395721
Alignment:
| Q |
26 |
agcataagagtattcatgtaggagatactcata |
58 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |
|
|
| T |
18395689 |
agcataagagtattcatgtgggagatactcata |
18395721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 350
Target Start/End: Complemental strand, 52593971 - 52593931
Alignment:
| Q |
310 |
gacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||| ||||||| ||||||||||||| ||||||||| |
|
|
| T |
52593971 |
gacaattttatttttctatattttgattggtcaaaatcaat |
52593931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 350
Target Start/End: Original strand, 32873036 - 32873118
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||| || |||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
32873036 |
aagagtagtggtatttgtacaccttttctaaacaacttccatgacaactttgtttttctctattttgattggtcaaaatcaat |
32873118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 22647450 - 22647532
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||| |||||||||| |||| |||||| ||||||| || |||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22647450 |
agagcagtgatatttatacatctttttctaaacaacttccatgacaactttgtttttctctattttgattggtcaaaatcaat |
22647532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 350
Target Start/End: Original strand, 39032707 - 39032786
Alignment:
| Q |
272 |
gtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| || ||||||| ||||||||||| |||||||||| || ||||||||| |
|
|
| T |
39032707 |
gtagtgatatttgtacacctctttctaaacaacttttatgacaactttgtttttctttattttgatttgtcaaaatcaat |
39032786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 6046454 - 6046416
Alignment:
| Q |
311 |
acaattttgtttttctctattttgattggtaaaaatcaa |
349 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
6046454 |
acaactttgtttttctctattttgattggtcaaaatcaa |
6046416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 20012959 - 20013003
Alignment:
| Q |
16 |
caagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
||||| || ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
20012959 |
caagaaagcaagcataagagtactcatgtgggagatactcataga |
20013003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 272 - 350
Target Start/End: Complemental strand, 51650789 - 51650711
Alignment:
| Q |
272 |
gtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||||| |||| || || |||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
51650789 |
gtagtgatatttgtacaccttttctaaataacttccatgacaactttgtttttctctattttgattggccaaaatcaat |
51650711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 350
Target Start/End: Complemental strand, 32008218 - 32008135
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||| || |||||||| |||||||||||||||||| |||||| ||||||||| |
|
|
| T |
32008218 |
aagagtagtgatatttgtacatatttttctaaacaacttccatgacaactttgtttttctctattttaattggtcaaaatcaat |
32008135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 350
Target Start/End: Original strand, 52678479 - 52678562
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
||||||||||||||||||||| || ||| ||||||| || ||||| || ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
52678479 |
aagagtagtgatatttgtacatctctttctaaacaactttcatgataactttgtttttctctattttgattggttaaaatcaat |
52678562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 17402805 - 17402862
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
17402805 |
tcatagatgtaagcaagatagcaagcataagagtactcatgtgggagatactcataga |
17402862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 6789828 - 6789770
Alignment:
| Q |
3 |
tcatagatgtaagcaa-gagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
|||||||||||||||| || || ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
6789828 |
tcatagatgtaagcaaagatagcaagcataagagtactcatgtgggagatactcataga |
6789770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 1140209 - 1140156
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactca |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| ||||| ||||||||||| |
|
|
| T |
1140209 |
tcatagatgtaagcaagatagcaagcataagagtactcatgagggagatactca |
1140156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 51032513 - 51032590
Alignment:
| Q |
268 |
aagagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaa |
345 |
Q |
| |
|
|||||||||||||| |||||| |||||||| |||| || |||||||| ||| |||||| | ||||||||||| |||| |
|
|
| T |
51032513 |
aagagtagtgatatatgtacaacttttttatacaactttcatgacaactttaattttctatcttttgattggtcaaaa |
51032590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 40159714 - 40159790
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttttaaacaatttacatgacaattttgtttttctctattttgattggtaaaaa |
345 |
Q |
| |
|
||||||||||||| |||||| || ||| |||| || |||||||| |||| |||||||| ||||||||||| |||| |
|
|
| T |
40159714 |
agagtagtgatatatgtacaactctttggtacaactttcatgacaactttggttttctctcttttgattggtcaaaa |
40159790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 14095095 - 14095013
Alignment:
| Q |
269 |
agagtagtgatatttgtacaccttttt-taaacaatttacatgacaattttgtttttctctattttgattggtaaaaatcaat |
350 |
Q |
| |
|
|||||||||||||||||||| || ||| ||||||| || |||||||| ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
14095095 |
agagtagtgatatttgtacatctctttctaaacaacttccatgacaactttgtttttctctattttgattgatcaaaatcaat |
14095013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 5377086 - 5377029
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
5377086 |
tcatagatgtaagcaagatagcaagcataagagtactcatgtgggagatactcataga |
5377029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 5378941 - 5378884
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
5378941 |
tcatagatgtaagcaagatagcaagcataagagtactcatgtgggagatactcataga |
5378884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 8915677 - 8915619
Alignment:
| Q |
2 |
atcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| || ||| | ||||||||||||| |
|
|
| T |
8915677 |
atcatagatgtaagcaagagagcaagcataagagtactcgtgtggaagatactcataga |
8915619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 2161920 - 2161984
Alignment:
| Q |
100 |
aaatgagtacatgtgtggtcttatttatagacctcaattatactaactagtgtgattaactaact |
164 |
Q |
| |
|
||||||||| |||| ||||||||||||| |||||| |||||||||||| |||| |||||||||| |
|
|
| T |
2161920 |
aaatgagtagatgtagggtcttatttataaacctcagttatactaactaatgtggttaactaact |
2161984 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9415278 - 9415184
Alignment:
| Q |
1 |
gatcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcatagagatacatattagaataaatagatttgattaaaagat |
96 |
Q |
| |
|
||||||| |||||| ||| ||| || |||||||||| |||||| ||||||||||||||| | ||| |||||| ||||||||||||||||||| |
|
|
| T |
9415278 |
gatcataaatgtaaacaaaagaacaaacataagagtactcatgtgggagatactcatagaaactcattgtagaat-gatagatttgattaaaagat |
9415184 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 24544818 - 24544733
Alignment:
| Q |
12 |
taagcaagagagtaagcataagagtattcatgtaggagatactcatagagatacatattagaataaa-tagatttgattaaaagata |
97 |
Q |
| |
|
||||||||| || ||||||||||||| ||||| ||||||||||||||| | |||| |||| |||| ||||||||| ||||||||| |
|
|
| T |
24544818 |
taagcaagaaagcaagcataagagtactcatgagggagatactcatagaaactcatagtagagtaaactagatttga-taaaagata |
24544733 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 1088676 - 1088729
Alignment:
| Q |
3 |
tcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactca |
56 |
Q |
| |
|
|||||||||||||||||| || || |||||||||| |||| | ||||||||||| |
|
|
| T |
1088676 |
tcatagatgtaagcaagatagcaaacataagagtactcatatgggagatactca |
1088729 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 15186 - 15122
Alignment:
| Q |
100 |
aaatgagtacatgtgtggtcttatttatagacctcaattatactaactagtgtgattaactaact |
164 |
Q |
| |
|
||||||||| |||| ||||||||||||| |||||| |||||||||||| |||| |||||||||| |
|
|
| T |
15186 |
aaatgagtagatgtagggtcttatttataaacctcagttatactaactaatgtggttaactaact |
15122 |
T |
 |
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Target: scaffold0189 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0189
Description:
Target: scaffold0189; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 19154 - 19096
Alignment:
| Q |
2 |
atcatagatgtaagcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
||||||||||||||||||| || ||||||| ||||| |||||| |||||| |||||||| |
|
|
| T |
19154 |
atcatagatgtaagcaagatagaaagcataggagtactcatgtgggagatgctcataga |
19096 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 58982 - 58936
Alignment:
| Q |
14 |
agcaagagagtaagcataagagtattcatgtaggagatactcataga |
60 |
Q |
| |
|
||||||| || ||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
58982 |
agcaagaaagcaagcataagagtactcatgtgggagatactcataga |
58936 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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