View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17883_high_38 (Length: 219)
Name: NF17883_high_38
Description: NF17883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17883_high_38 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 40079469 - 40079671
Alignment:
| Q |
2 |
tacccatgtcaccgacattgacatgggttggattgtcgactaatcctctagatatgacgaatccttctttattgtacaatgactctttctacgaatctcc |
101 |
Q |
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| T |
40079469 |
tacccatgtcaccgacattgacatgggttggattgtcgactaatcctctagatatgacgaatccttctttattgtacaatgactctttctacgaatctcc |
40079568 |
T |
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| Q |
102 |
actatgtctcgcaagaaaggaagtttgtatcgcattataacactttctccactttcagttgaacccaaaatatcaaattctctctgttgttatttgaatt |
201 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40079569 |
actatgtctcgcaagaaaggaagtttgtatcgcattagaacactttctccactttcagttgaacccaaaatatcaaattctctctgttgttatttgaatt |
40079668 |
T |
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| Q |
202 |
cat |
204 |
Q |
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| T |
40079669 |
cat |
40079671 |
T |
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