View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17883_high_7 (Length: 502)
Name: NF17883_high_7
Description: NF17883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17883_high_7 |
 |  |
|
| [»] scaffold0106 (1 HSPs) |
 |  |  |
|
| [»] scaffold0005 (1 HSPs) |
 |  |  |
|
| [»] scaffold0039 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 280; Significance: 1e-156; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 52 - 499
Target Start/End: Original strand, 33044238 - 33044674
Alignment:
| Q |
52 |
tacatattttagataaatttttaaagctgccaaaatatgagtttttagagtttcatgtaccttctaaagttctgaattaaaattaaaattaacaaaaaat |
151 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
33044238 |
tacatattttagataaatttttaaagctgccaaaatatgagtttttagagtttcatgtac----------tctaaattaaaattaaaattaacaaaaaat |
33044327 |
T |
 |
| Q |
152 |
ttaataannnnnnnnngaaattattgaatcttgcacatgcaaatattattagttttagaattagtattatagcactattatcacggacactatatttgag |
251 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33044328 |
ttaataatttttttt-gaaattattgaatcttgctcatgcaaatattattagttttagaattagtattatagcactattatcacggacactatatttgag |
33044426 |
T |
 |
| Q |
252 |
atttattaacgttgaaaaacttactgaattatgaaaaatattaccatttatttaataacattggaacaaacattacaccatttattgtctctggcaacan |
351 |
Q |
| |
|
||||||||||||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| |||||| |
|
|
| T |
33044427 |
atttattaacgttgaaaaacttactaaatcacgaaaaatattactatttatttaataacattggaacaaacattataccatttgttgtctctagcaacac |
33044526 |
T |
 |
| Q |
352 |
nnnnnngaaggacgtgtaaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccct |
451 |
Q |
| |
|
|| | ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||| | ||| |||||||||||||||||||||| |
|
|
| T |
33044527 |
tttcttgaggaacgtgtaaaattgtcccctaaaagtctctaaggcaatgatttacgagtgttgccaaaaaaaaattcgcaacccctgataaacgtcccct |
33044626 |
T |
 |
| Q |
452 |
aaaatacttttggagatgattttggagcattgcactcttattttgttg |
499 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
33044627 |
aaaatacttttggggatgattttggagcattgcactcttatttcgttg |
33044674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 479
Target Start/End: Complemental strand, 23869183 - 23869064
Alignment:
| Q |
361 |
ggacgtgtaaaa-ttgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatact |
459 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||| |||||||| ||||| ||||||||| | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
23869183 |
ggacgtgtaaaaattgtctcctaaaaggctctaaggcgacgatttatgagtgttgccaaaaaaaaattcgcaacccctgataaacgtcccctaaaatact |
23869084 |
T |
 |
| Q |
460 |
tttggagatgattttggagc |
479 |
Q |
| |
|
||||| || ||||||||||| |
|
|
| T |
23869083 |
tttggggacgattttggagc |
23869064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 369 - 475
Target Start/End: Original strand, 24950775 - 24950881
Alignment:
| Q |
369 |
aaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttttggagat |
468 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||| ||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| || |
|
|
| T |
24950775 |
aaaattgtcccctaaaagtctctaaggcaacaatttatgagtgttatcaaaaatattttcgcaacccctgataaacgtcccctaaaatacttttggggac |
24950874 |
T |
 |
| Q |
469 |
gattttg |
475 |
Q |
| |
|
||||||| |
|
|
| T |
24950875 |
gattttg |
24950881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 369 - 494
Target Start/End: Complemental strand, 34203557 - 34203432
Alignment:
| Q |
369 |
aaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttttggagat |
468 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| ||||| | | |||||||||| | ||| || |||||||||||||||||||||||||||| || |
|
|
| T |
34203557 |
aaaattgtcccctaaaagtctctaaggcaacgatttatgagtgttacaaaaaatatttccgcaatccttgataaacgtcccctaaaatacttttggggac |
34203458 |
T |
 |
| Q |
469 |
gattttggagcattgcactcttattt |
494 |
Q |
| |
|
||||||| ||| || |||| |||||| |
|
|
| T |
34203457 |
gattttgaagcgttacactattattt |
34203432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 410 - 500
Target Start/End: Complemental strand, 25409752 - 25409662
Alignment:
| Q |
410 |
tgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttttggagatgattttggagcattgcactcttattttgttgg |
500 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||| || | ||||||||| || | || |||||| ||||| |
|
|
| T |
25409752 |
tgctgccaaaaatattttcgcaacccctgaaaaacgtcctctaaaatacctttggggacgtttttggagcgttactctattatttcgttgg |
25409662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 22278711 - 22278638
Alignment:
| Q |
402 |
tttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttttggagatgattttg |
475 |
Q |
| |
|
|||| |||||| ||| ||||||||| |||| |||||||| ||||||||||| ||||||||| || ||||||| |
|
|
| T |
22278711 |
tttatgagtgcgcccagaaatatttttgcaacacctgataagcgtcccctaaagtacttttggggacgattttg |
22278638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 369 - 494
Target Start/End: Complemental strand, 12250383 - 12250258
Alignment:
| Q |
369 |
aaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttttggagat |
468 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||| ||||| ||| |||||||||||| |||||||| |||||||||||||||||||||||||| || |
|
|
| T |
12250383 |
aaaattatcccctaaaagtctctaaggcaacgatttgtgagtgttgcaaaaaatattttcgcaacccctaataaacgtcccctaaaatacttttggggac |
12250284 |
T |
 |
| Q |
469 |
gattttggagcattgcactcttattt |
494 |
Q |
| |
|
||||||||||| || |||| |||||| |
|
|
| T |
12250283 |
gattttggagcgttacactattattt |
12250258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 369 - 440
Target Start/End: Original strand, 15971879 - 15971950
Alignment:
| Q |
369 |
aaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgat |
440 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
15971879 |
aaaattgtcccctaaaagtctctaaggcaacgatttacgagtgttgccaaaaatattttcgcaacccctgat |
15971950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 460
Target Start/End: Complemental strand, 20469971 - 20469930
Alignment:
| Q |
419 |
aaatattttcacaacccctgataaacgtcccctaaaatactt |
460 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||| |||||| |
|
|
| T |
20469971 |
aaatattttcacaatccctgaaaaacgtcccctaatatactt |
20469930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 361 - 494
Target Start/End: Complemental strand, 18499073 - 18498939
Alignment:
| Q |
361 |
ggacgtgtaaaa-ttgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatact |
459 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||||||||||| ||||| | | |||||||||| | ||| |||||||||||||||||||||||||| |
|
|
| T |
18499073 |
ggacgtgtaaaaattgtcccctaaaagtctctaaggcaacgatttatgagtgttacaaaaaatatttccgcaatccctgataaacgtcccctaaaatact |
18498974 |
T |
 |
| Q |
460 |
tttggagatgattttggagcattgcactcttattt |
494 |
Q |
| |
|
||||| || ||||||| ||| || |||| |||||| |
|
|
| T |
18498973 |
tttggggacgattttgaagcgttacactattattt |
18498939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 63; Significance: 4e-27; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 368 - 494
Target Start/End: Original strand, 12106467 - 12106593
Alignment:
| Q |
368 |
taaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttttggaga |
467 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||| ||||| |||||||| ||||||| ||||| |||| |||| || ||||||||| ||| || || |
|
|
| T |
12106467 |
taaaattgtcccctaaaagtctctaaggcatcgatttatgagtgttgccaaaattattttcgcaaccactgaaaaacatctcctaaaatattttagggga |
12106566 |
T |
 |
| Q |
468 |
tgattttggagcattgcactcttattt |
494 |
Q |
| |
|
||||||||||| ||||||| |||||| |
|
|
| T |
12106567 |
cgattttggagcgttgcactattattt |
12106593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 369 - 475
Target Start/End: Original strand, 18403277 - 18403383
Alignment:
| Q |
369 |
aaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttttggagat |
468 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| || || | |||||||||||| |||||||||||||||||||||||||| |||||||| || |
|
|
| T |
18403277 |
aaaattgtcccctaaaagtctctaaggcaacgatttatgactgtagtcaaaaatatttttgcaacccctgataaacgtcccctaaaacacttttggggac |
18403376 |
T |
 |
| Q |
469 |
gattttg |
475 |
Q |
| |
|
||||||| |
|
|
| T |
18403377 |
gattttg |
18403383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 361 - 474
Target Start/End: Complemental strand, 19369521 - 19369407
Alignment:
| Q |
361 |
ggacgtgtaaaa-ttgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatact |
459 |
Q |
| |
|
|||||||||||| ||||| | ||||||||||| |||||||| |||| | || |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
19369521 |
ggacgtgtaaaaattgtcccttaaaagtctctgaggcaacgttttatggctgttgccaaaaatattttcgcaacccctgataaacgtcccctaaaatact |
19369422 |
T |
 |
| Q |
460 |
tttggagatgatttt |
474 |
Q |
| |
|
||||| || |||||| |
|
|
| T |
19369421 |
tttggggacgatttt |
19369407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0106 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0106
Description:
Target: scaffold0106; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 369 - 494
Target Start/End: Complemental strand, 27219 - 27094
Alignment:
| Q |
369 |
aaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttttggagat |
468 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||| |||||||||||||||||||| |||||||||||||| || |
|
|
| T |
27219 |
aaaattgtcccctaaaagtctctaaggcaacgatttatccctgttgccaaatatattttcgcaacccctgataaacgtcccttaaaatacttttggggac |
27120 |
T |
 |
| Q |
469 |
gattttggagcattgcactcttattt |
494 |
Q |
| |
|
|||||| ||| || |||| |||||| |
|
|
| T |
27119 |
aattttgaagcgttacactgttattt |
27094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 59; Significance: 9e-25; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 319 - 477
Target Start/End: Complemental strand, 3544182 - 3544023
Alignment:
| Q |
319 |
aaacattacaccatttattgtctctggcaacannnnnnngaaggacgtgtaaaa-ttgtctcctaaaagtctctaaggcaacgatttacgagtgctgcca |
417 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | ||||||| |||| || || ||||||||||||||||||||||||||| || || | || |
|
|
| T |
3544182 |
aaacactacaccatttattgtctctggcaacacttttttaagggacgtgcaaaaattatcccctaaaagtctctaaggcaacgatttatgaatgtagtca |
3544083 |
T |
 |
| Q |
418 |
aaaatattttcacaacccctgataaacgtcccctaaaatacttttggagatgattttgga |
477 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||| ||||| || || ||||||||| |
|
|
| T |
3544082 |
aaaatatttttgcaacccctgataaaagtcccctaaaacactttgggggacgattttgga |
3544023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 457
Target Start/End: Complemental strand, 1464025 - 1463937
Alignment:
| Q |
369 |
aaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaata |
457 |
Q |
| |
|
|||||||| |||||||||| ||||||||||| ||| || || | ||| |||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
1464025 |
aaaattgttgcctaaaagtcgctaaggcaacgttttctgactgttcccagaaatattttcacaacctctggaaaacgtcccctaaaata |
1463937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 369 - 500
Target Start/End: Complemental strand, 20145632 - 20145502
Alignment:
| Q |
369 |
aaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttttggagat |
468 |
Q |
| |
|
||||||||| || |||||| ||||||||||| ||| | |||||||||||||||||| |||||||| |||||||||| |||||| || ||||| || |
|
|
| T |
20145632 |
aaaattgtccccgaaaagtggctaaggcaacgttttttggctgctgccaaaaatatttttgcaaccccttataaacgtcctctaaaa-acctttggggac |
20145534 |
T |
 |
| Q |
469 |
gattttggagcattgcactcttattttgttgg |
500 |
Q |
| |
|
| ||||||||| || | || |||||| ||||| |
|
|
| T |
20145533 |
gtttttggagcgttactctattatttcgttgg |
20145502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 460
Target Start/End: Original strand, 11485318 - 11485409
Alignment:
| Q |
369 |
aaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatactt |
460 |
Q |
| |
|
|||||||| ||||||||| ||||||||||| ||| || || ||||| |||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
11485318 |
aaaattgttgcctaaaagttgctaaggcaacgctttctgactgttgccagaaatattttcacaaccccacggaaatgtcccctaaaatactt |
11485409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 479
Target Start/End: Complemental strand, 240996 - 240879
Alignment:
| Q |
362 |
gacgtgtaaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttt |
461 |
Q |
| |
|
||||||||||| |||| |||||||||| || |||||||||||| | || |||| ||| |||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
240996 |
gacgtgtaaaaatgtcccctaaaagtccctcaggcaacgatttttggttgtagccagaaagattttcgcaacccctgataaacgtcccctaaactacttt |
240897 |
T |
 |
| Q |
462 |
tggagatgattttggagc |
479 |
Q |
| |
|
||| || | ||||||||| |
|
|
| T |
240896 |
tggggacgtttttggagc |
240879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 479
Target Start/End: Original strand, 14576379 - 14576496
Alignment:
| Q |
362 |
gacgtgtaaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttt |
461 |
Q |
| |
|
||||||||||| |||| |||||||||| || |||||||||||| | || |||| ||| |||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
14576379 |
gacgtgtaaaaatgtcccctaaaagtccctcaggcaacgatttttggttgtagccagaaagattttcgcaacccctgataaacgtcccctaaactacttt |
14576478 |
T |
 |
| Q |
462 |
tggagatgattttggagc |
479 |
Q |
| |
|
||| || | ||||||||| |
|
|
| T |
14576479 |
tggggacgtttttggagc |
14576496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 325 - 500
Target Start/End: Complemental strand, 4245319 - 4245143
Alignment:
| Q |
325 |
tacaccatttattgtctctggcaacannnnnnngaaggacgtgtaaaa-ttgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaata |
423 |
Q |
| |
|
|||||||||||||||||||||||||| || ||| ||||||| |||| ||||||||| ||||||||||| ||| | |||||||||||||| |
|
|
| T |
4245319 |
tacaccatttattgtctctggcaacacttttttaaaagacatgtaaaaattgttccctaaaagtggctaaggcaacgttttttggttgctgccaaaaata |
4245220 |
T |
 |
| Q |
424 |
ttttcacaacccctgataaacgtcccctaaaatacttttggagatgattttggagcattgcactcttattttgttgg |
500 |
Q |
| |
|
||||| | |||||||| |||||||| ||||||||| ||| | || | ||||||||| || | || |||||| ||||| |
|
|
| T |
4245219 |
ttttcgcgacccctgaaaaacgtcctctaaaatacctttagggacgtttttggagcgttactctattatttcgttgg |
4245143 |
T |
 |
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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0039
Description:
Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 479
Target Start/End: Complemental strand, 74823 - 74713
Alignment:
| Q |
369 |
aaaattgtctcctaaaagtctctaaggcaacgatttacgagtgctgccaaaaatattttcacaacccctgataaacgtcccctaaaatacttttggagat |
468 |
Q |
| |
|
||||||||| ||| ||||| ||||||||||| ||| ||||| |||| |||||| ||| ||||||||| ||||||||||| ||||| || ||| || |
|
|
| T |
74823 |
aaaattgtcccctgaaagtggctaaggcaacgttttttgagtgtcgccagaaatatattcgcaacccctggaaaacgtccccttaaatatttctggggac |
74724 |
T |
 |
| Q |
469 |
gattttggagc |
479 |
Q |
| |
|
| ||||||||| |
|
|
| T |
74723 |
gtttttggagc |
74713 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0039; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 479
Target Start/End: Original strand, 78724 - 78789
Alignment:
| Q |
414 |
gccaaaaatattttcacaacccctgataaacgtcccctaaaatacttttggagatgattttggagc |
479 |
Q |
| |
|
|||| |||||| ||| ||||||||| ||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
78724 |
gccagaaatatattcgcaacccctggaaaacgtccccttaaatacttctggagacgtttttggagc |
78789 |
T |
 |
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