View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17883_low_1 (Length: 864)
Name: NF17883_low_1
Description: NF17883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17883_low_1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 521; Significance: 0; HSPs: 20)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 521; E-Value: 0
Query Start/End: Original strand, 13 - 630
Target Start/End: Complemental strand, 36199580 - 36198962
Alignment:
| Q |
13 |
actctcatctcatcacaggcctcagataccctgtgcctcgtgtagggtaggctgaaaaaaggggtttggcacttttatagcaagaacagattatggaata |
112 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
36199580 |
actctcatctcatcaaaggcctcagataccctgtgcctcgtgtagggtaggctgaaaaaaggggtttggcacttttatagcaagaacagattatagaaga |
36199481 |
T |
|
| Q |
113 |
tattgcagggacttattttccggacatttacattcctaacaatgatagggttaaggagaaaatttaatcggactatgtggtctagataaaagagtcaagg |
212 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36199480 |
tattgcaggggcttattttccggacatttacattcctaacaatgatagggttaaggagaaaatttaatcggactatgtggtctagataaaagagtcaagg |
36199381 |
T |
|
| Q |
213 |
cttgtatgaaaaccgtcataagaagagccgagacagatctattgttccaaaagattgtcacaacaactgtgacaaagatgtcaaacactaatcggggatg |
312 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36199380 |
cttatatgaaaaccgtcataagaagagccgagagagatcaattgttccaaaagattgtcacaacaactgtgacaaagatgtcaaacactaatcggggatg |
36199281 |
T |
|
| Q |
313 |
caataggtctgaattttgatgatacgacagatatagctgaatctacttgttgcatgtgttttgttaataataaaagattgacaactacagaaagagctct |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36199280 |
caataggtctgaattttgatgatacgacagatatagctgaatctacttgttgcatgtgttttgttaataataaaagattgacaactacagaaagagctct |
36199181 |
T |
|
| Q |
413 |
tcttctgtgtgctaagatgaaagagctgcaaacagtcctagttgtagtgtatgatctttatggtagacttgattttagtaagattggtatcccctttggt |
512 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
36199180 |
tcttctgtgtgctaagatgaaagagctgcaaacagtcctagttgtagtgtatgatctttatggtagacttgatttaagtaagattggtatcccctttggt |
36199081 |
T |
|
| Q |
513 |
gaagatcataatggttgcaagatattgctcacatct------acaagtttggaggttttatctgagcaaatgaaggttcataaattgatacaattgtgag |
606 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| | ||||||||||||||||| ||||||||| | |
|
|
| T |
36199080 |
gaagatcataatggttgcaagatattgctcacatctacaactacaagtttggagattttatccaaacaaatgaaggttcataacttgatacaact----- |
36198986 |
T |
|
| Q |
607 |
agacatgacatgattctcttccaa |
630 |
Q |
| |
|
||||||||||||||| |||||||| |
|
|
| T |
36198985 |
agacatgacatgattatcttccaa |
36198962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 165 - 849
Target Start/End: Complemental strand, 36197293 - 36196595
Alignment:
| Q |
165 |
aaggagaaaatttaatcggactatgtggtctagataaaagagtcaaggcttgtatgaaaaccgtcataagaagagccgagacagatctattgttccaaaa |
264 |
Q |
| |
|
||||||||||| | || ||| ||||||| | ||| |||||||||||| || | ||||| | ||||||||||| |||| ||||| ||| |||||||| |
|
|
| T |
36197293 |
aaggagaaaatatcattggattatgtgggccagaaaaaagagtcaagcattctgcaaaaacagctataagaagagctgagagagatcaattattccaaaa |
36197194 |
T |
|
| Q |
265 |
gattgtcacaacaactgtgacaaagatg-----------------tcaaacactaatcggggatgcaataggtctgaattttgatgatacgacagatata |
347 |
Q |
| |
|
|||||||||| ||||||||||||||| | |||||||||||| || |||||||||| |||||||||||| ||| ||| | |
|
|
| T |
36197193 |
gattgtcacagcaactgtgacaaagaagccagacattacaaagattcaaacactaattggtgatgcaatag------attttgatgataagacggatcca |
36197100 |
T |
|
| Q |
348 |
gctgaatctacttgttgcatgtgttttgttaataataaaagattgacaactacagaaagagctcttcttctgtgtgctaagatgaaagagctgcaaacag |
447 |
Q |
| |
|
|||||||| ||||||||||||| ||||| ||||| |||||| || ||||| |||||||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
36197099 |
gctgaatcaacttgttgcatgttttttggtaatagaaaaagaatggcaactgcagaaagagctcatcttttgtgtgctaagatgaaagagctgcaaacag |
36197000 |
T |
|
| Q |
448 |
tcctagttgtagtgtatgatctttatggtagacttgattttagtaagattggtat---cccctttggtgaagatcataatggttgcaagatattgctcac |
544 |
Q |
| |
|
||||||||||| ||||||||||| ||| ||||| ||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36196999 |
tcctagttgtactgtatgatcttcgtgggagactcgatttaggtgagattggtatccccccctttggtgaagatcataatggttgcaagatattgctcac |
36196900 |
T |
|
| Q |
545 |
atctacaagtttggaggttttatctgagcaaatgaaggttcataaattgatacaattgtgagagacatgacatgattctcttccaacaagagcgtttgta |
644 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36196899 |
atctacaagtttggaggttttatctgagcaaatgaaggttcataaattgatacaattgtgagagacatgacatgattctcttccaacaagagcgtttgta |
36196800 |
T |
|
| Q |
645 |
gcagagatgatgaaaatcataagtccaaacatgcacatcgtttggaaaacaccatgttggagagattagaggttgagaagtgcttttgtaggtatagatg |
744 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36196799 |
gcagagatgatgaaaatcataagtccaaacatgcacatcgtttggaaaacaccatgttggagagattagaggttgagaagtgcttttgtaggtatagatg |
36196700 |
T |
|
| Q |
745 |
aactaagattttgtattctgtcaaatgcttgtgtttgtattatatccgagacatgtatccattatggtaagatttcccctgtttcttgcagtaatttcgt |
844 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36196699 |
aactaagattttgtattctgtcaaatgcttgtgtttgtattatatccgagacatgtatccattatggtaagatttcccctgtttcttgcagtaatttcgt |
36196600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 376 - 849
Target Start/End: Complemental strand, 36188750 - 36188278
Alignment:
| Q |
376 |
ttaataataaaagattgacaactacagaaagagctcttcttctgtgtgctaagatgaaagagctgcaaacagtcctagttgtagtgtatgatctttatgg |
475 |
Q |
| |
|
|||||| ||||||| ||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| |
|
|
| T |
36188750 |
ttaatagtaaaagaatgataactgcagaaagagctgatcttctttgtgctaagatgaaagagctgcaaacagtcctgattgtaatgtatgatcttcatgg |
36188651 |
T |
|
| Q |
476 |
tagacttgattttagtaagattggtatcccctttggtgaagatcataatggttgcaagatattgctcacatctacaagtttggaggttttatctgagcaa |
575 |
Q |
| |
|
| |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36188650 |
tcgactcaatttaggagagattggtatcccctttggtgaagatcataatggttgcaagatattgctcacatctacaagtttggaggttttatctgagcaa |
36188551 |
T |
|
| Q |
576 |
atgaaggttcataaattgatacaattgtgagagacatgacatgattctcttccaacaagagcgtttgtagcagagatgatgaaaatcataagtccaaaca |
675 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36188550 |
atgaaggttcataaattgatacaattgtgagagacatgacatgattctcttccaacaagagcgtttgtagcagagatgatgaaaatcataagtccaaaca |
36188451 |
T |
|
| Q |
676 |
tgcacatcgtttggaaaacaccatgttggagagattagaggttgagaagtgcttttgtaggtatagatgaactaagattttgtattctgtcaaatgcttg |
775 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36188450 |
tgcacatcgtttggaaaacaccatgttggagagattagaggttgagaagtgcttttgtaggtatagatgaactaagattttgtattctgtcaaatgcttg |
36188351 |
T |
|
| Q |
776 |
tgtttgtattatatccgagacatgtatccattatggtaagatttcccctgtttcttgcagtaatttcgtctgtg |
849 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| |
|
|
| T |
36188350 |
tgtttgtattatatccgagacatgtatccattatggtaagattt-ccctttttcttgcagtaatttcctctgtg |
36188278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 310 - 849
Target Start/End: Complemental strand, 36210249 - 36209719
Alignment:
| Q |
310 |
atgcaataggtctgaattttgatgatacgacagatatagctgaatctacttgttgcatgtgttttgttaataataaaagattgacaactacagaaagagc |
409 |
Q |
| |
|
||||||||||||| |||||| |||||| ||| || |||| | ||| ||| |||||| | |||||| ||||| ||||||| ||| |||| |||||||||| |
|
|
| T |
36210249 |
atgcaataggtctcaattttaatgataagacgtatgtagccgtatcaactggttgcacgcgttttggtaatagtaaaagaatgataactgcagaaagagc |
36210150 |
T |
|
| Q |
410 |
tcttcttctgtgtgctaagatgaaagagctgcaaacagtcctagttgtagtgtatgatctttatggtagacttgattttagtaagattggtatccccttt |
509 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| |||| |||| | ||||||||||||||||| |
|
|
| T |
36210149 |
tgatcttctttgtgctaagatgaaagagctgcaaacagtcctgattgtaatgtatgatcttcatggtcgactcaatttaggagagattggtatccccttt |
36210050 |
T |
|
| Q |
510 |
ggtgaagatcataatggttgcaagatattgctcacatctacaagtttggaggttttatctgagcaaatgaaggttcataaattgatacaattgtgagaga |
609 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
36210049 |
ggtgaagatcataatggttgcaagatattgctgacatctacaagtttggaggttttatccaagcaaatgaaggttcataaattgata--------agaga |
36209958 |
T |
|
| Q |
610 |
catgacatgattctcttccaacaagagcgtttgtagcagagatgatgaaaatcataagtccaaacatgcacatcgtttggaaaacaccatgttggagaga |
709 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36209957 |
catggcatgattttcttccaacaagagcgtttgtagcagagatgatgaaaatctgaagtcgaaacatgcacatcgtttggaaaacaccatgttggagaga |
36209858 |
T |
|
| Q |
710 |
ttagaggttgagaagtgcttttgtaggtatagatgaactaagattttgtattctgtcaaatgcttgtgtttgtattatatccgagacatgtatccattat |
809 |
Q |
| |
|
|||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
36209857 |
ttagaggttgagaagtgc-tttgcagttatagatgaactaagattttgtattctgtcaaatgcttgtgtttgtattatgtccgatacatgtatccattat |
36209759 |
T |
|
| Q |
810 |
ggtaagatttcccctgtttcttgcagtaatttcgtctgtg |
849 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
36209758 |
ggtaagatttcccttgtttcttgcagtaatttcctctgtg |
36209719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 311 - 783
Target Start/End: Complemental strand, 36208161 - 36207688
Alignment:
| Q |
311 |
tgcaataggtctgaattttgatgatacgacagatatagctgaatctacttgttgcatgtgttttgttaataataaaagattgacaactacagaaagagct |
410 |
Q |
| |
|
|||||||||||||||||||||||||| || ||| || ||||| | |||||||| |||||| || |||||| |||||| |||||||| ||||||||||| |
|
|
| T |
36208161 |
tgcaataggtctgaattttgatgataagatcgatctatctgaaacatcttgttgcgtgtgttatggtaataacaaaagaatgacaactgcagaaagagct |
36208062 |
T |
|
| Q |
411 |
cttcttctgtgtgctaagatgaaagagctgcaaacagtcctagttgtagtgtatgatctttatggtagacttgattttagtaagattggtatcccctttg |
510 |
Q |
| |
|
|||||||||||||||||||| || | ||||||||||| ||||||||| ||||||||||| |||||||||||||||| || |||||||||||||||||| |
|
|
| T |
36208061 |
cttcttctgtgtgctaagataaagaaactgcaaacagtactagttgtactgtatgatcttcatggtagacttgatttaggtgagattggtatcccctttg |
36207962 |
T |
|
| Q |
511 |
gtgaagatcataatggttgcaagatattgctcacatctacaagtttggaggttttatctgagcaaatgaaggttcataaattgatacaattgtgagagac |
610 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| | ||||| |||||| | || ||||||||| ||||||| |||||||| | |||||| |
|
|
| T |
36207961 |
gtgaagatcataatggttgcaagatattgctgacatctacaagctcggaggctttatccaaacatatgaaggttgataaattaatacaattatcagagac |
36207862 |
T |
|
| Q |
611 |
atgacatga-ttctcttccaacaagagcgtttgtagcagagatgatgaaaatcataagtccaaacatgcacatcgtttggaaaacaccatgttggagaga |
709 |
Q |
| |
|
||||||||| |||||||||||| || | ||| | || |||| |||||||||| ||||||||||||||||||| | | ||||||||||||||||||||| |
|
|
| T |
36207861 |
atgacatgatttctcttccaaccagtgtgttagaagtagagttgatgaaaatttgaagtccaaacatgcacatcatatcgaaaacaccatgttggagaga |
36207762 |
T |
|
| Q |
710 |
ttagaggttgagaagtgcttttgtaggtatagatgaactaagattttg-tattctgtcaaatgcttgtgtttgta |
783 |
Q |
| |
|
||||||||| | | ||| ||||| | | || |||||||||||||||| | |||||| ||||||||||| ||||| |
|
|
| T |
36207761 |
ttagaggttcacatgtg-atttgttgttgtatatgaactaagattttgtttttctgttaaatgcttgtgcttgta |
36207688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 293 - 690
Target Start/End: Complemental strand, 36202707 - 36202310
Alignment:
| Q |
293 |
tcaaacactaatcggggatgcaataggtctgaattttgatgatacgacagatatagctgaatctacttgttgcatgtgttttgttaataataaaagattg |
392 |
Q |
| |
|
|||||||| ||| || ||||||||| |||||||||||||||||| || ||| |||||||||| | |||||||||| || | |||||| |||||| | |
|
|
| T |
36202707 |
tcaaacacaaattggtgatgcaatatgtctgaattttgatgataagattgatctagctgaatcatcctgttgcatgtcttacggtaataacaaaagaata |
36202608 |
T |
|
| Q |
393 |
acaactacagaaagagctcttcttctgtgtgctaagatgaaagagctgcaaacagtcctagttgtagtgtatgatctttatggtagacttgattttagta |
492 |
Q |
| |
|
| |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||| ||| |
|
|
| T |
36202607 |
agaactgcagaaagagctcttctactgtgtgctaagatgaaggagctgcaaacagtcctagttgtaatgtatgatctccatggtagacttgatttaagtg |
36202508 |
T |
|
| Q |
493 |
agattggtatcccctttggtgaagatcataatggttgcaagatattgctcacatctacaagtttggaggttttatctgagcaaatgaaggttcataaatt |
592 |
Q |
| |
|
| |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
36202507 |
aaattggtatgccctttggtgaagatcataagggttgcaagatattgctgacatctacaaatttggaggttttatccaaagaaatgaaggttcataaatt |
36202408 |
T |
|
| Q |
593 |
gatacaattgtgagagacatgacatgattctcttccaacaagagcgtttgtagcagagatgatgaaaatcataagtccaaacatgcacatcgtttgga |
690 |
Q |
| |
|
||||||||||| |||||||||| |||| ||||||| || |||||||||| ||||||||||||||||||| ||||| ||||||| |||| ||||||| |
|
|
| T |
36202407 |
gatacaattgtcagagacatgaaatgaatctcttcttactagagcgtttgaagcagagatgatgaaaatctgaagtcgaaacatgaacatagtttgga |
36202310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 311 - 783
Target Start/End: Complemental strand, 36184977 - 36184500
Alignment:
| Q |
311 |
tgcaataggtctgaattttgatgatacgacagatatagctgaatctacttgttgcatgtgttttgttaataataaaagattgacaactacagaaagagct |
410 |
Q |
| |
|
|||||||||||||||||||||||||| || ||| || ||||| | |||||||| |||||| || |||||| |||||| |||||||| ||||||||||| |
|
|
| T |
36184977 |
tgcaataggtctgaattttgatgataagatcgatctatctgaaacatcttgttgcgtgtgttatggtaataacaaaagaatgacaactgcagaaagagct |
36184878 |
T |
|
| Q |
411 |
cttcttctgtgtgctaagatgaaagagctgcaaacagtcctagttgtagtgtatgatctttatggtagacttgattttagtaagattggtatcccctttg |
510 |
Q |
| |
|
||||||||||| |||||||| || || ||||||||||| ||||||||| ||| ||||||| |||||||||||||||| || |||||||||||||||||| |
|
|
| T |
36184877 |
cttcttctgtgcgctaagataaaggaactgcaaacagtactagttgtattgtgtgatcttcatggtagacttgatttaggtgagattggtatcccctttg |
36184778 |
T |
|
| Q |
511 |
gtgaagatcataatggttgcaagatattgctcacatctacaagtttggaggttttatctgagcaaatgaaggttcataaattgatacaattgtgagagac |
610 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||| | ||||| ||||| | || ||||||||| ||||| |||||||||| | |||||| |
|
|
| T |
36184777 |
gtgaagatcataatggttgcaagatattgctcacatcaacaagctcggaggcattatccaaacatatgaaggttgataaagtgatacaattatcagagac |
36184678 |
T |
|
| Q |
611 |
atgacatgattct-cttccaacaagagcgtttgtagcagagatgatgaaaatcataagtccaaacatgcacatcgtttggaaaacaccatgttggagaga |
709 |
Q |
| |
|
||||||||||| | |||||||| |||| ||| | ||||||| ||||||||||| ||||||||||||| | ||| | |||| ||||||||||||||||| |
|
|
| T |
36184677 |
atgacatgatttttcttccaactagagtgttagaagcagagttgatgaaaatctgaagtccaaacatgaatatcatacggaagacaccatgttggagaga |
36184578 |
T |
|
| Q |
710 |
ttagag----gttgagaagtgcttttgtaggtatagatgaactaagattttg-tattctgtcaaatgcttgtgtttgta |
783 |
Q |
| |
|
|||||| ||| | ||||||||| || | | ||||||||||||||||||| | |||||| ||||||||||| ||||| |
|
|
| T |
36184577 |
ttagagagaggttcacaagtgcttt-gttgttgtagatgaactaagattttgtttttctgttaaatgcttgtgcttgta |
36184500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 293 - 683
Target Start/End: Complemental strand, 36213608 - 36213218
Alignment:
| Q |
293 |
tcaaacactaatcggggatgcaataggtctgaattttgatgatacgacagatatagctgaatctacttgttgcatgtgttttgttaataataaaagattg |
392 |
Q |
| |
|
|||||||| ||| || |||||||||||||| |||||| |||||| || || |||| ||||| ||||||||||||||||||| ||||| ||||| | || |
|
|
| T |
36213608 |
tcaaacacaaattggtgatgcaataggtctcaattttaatgataagatgaatgtagccgaatcaacttgttgcatgtgttttggtaatagtaaaacagtg |
36213509 |
T |
|
| Q |
393 |
acaactacagaaagagctcttcttctgtgtgctaagatgaaagagctgcaaacagtcctagttgtagtgtatgatctttatggtagacttgattttagta |
492 |
Q |
| |
|
|||||| |||||||||||| |||| | |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||| ||||| || |
|
|
| T |
36213508 |
acaactgcagaaagagctcatcttatttgtgctaagatgaaagagctgcaaacagtcctgattgtaatgtatgatcttcatgggagactcgatttaggtg |
36213409 |
T |
|
| Q |
493 |
agattggtatcccctttggtgaagatcataatggttgcaagatattgctcacatctacaagtttggaggttttatctgagcaaatgaaggttcataaatt |
592 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||| ||||||||| |
|
|
| T |
36213408 |
agattggtgtcccctttggtgaagatcataatggttgcaagatattactcacatctacaagtgtggaggttttatccaatcaaatgaaggctcataaatt |
36213309 |
T |
|
| Q |
593 |
gatacaattgtgagagacatgacatgattctcttccaacaagagcgtttgtagcagagatgatgaaaatcataagtccaaacatgcacatc |
683 |
Q |
| |
|
||| ||||| | ||||||||||||||||||||||| ||| | || ||||| ||||||| |||| ||||| ||||||||||||||||||| |
|
|
| T |
36213308 |
gattcaattatcagagacatgacatgattctcttcaaactaaagtgtttgaagcagagttgataaaaatttgaagtccaaacatgcacatc |
36213218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 309 - 758
Target Start/End: Complemental strand, 36201306 - 36200857
Alignment:
| Q |
309 |
gatgcaataggtctgaattttgatgatacgacagatatagctgaatctacttgttgcatgtgttttgttaataataaaagattgacaactacagaaagag |
408 |
Q |
| |
|
|||||||||||||| |||||| |||||| ||| || ||| |||| ||||||||||||||||||| ||||| ||||||| |||||||| |||| |||| |
|
|
| T |
36201306 |
gatgcaataggtctcaattttaatgatatgacggaggcagcaaaatcaacttgttgcatgtgttttggtaatagtaaaagaatgacaactgcagatagag |
36201207 |
T |
|
| Q |
409 |
ctcttcttctgtgtgctaagatgaaagagctgcaaacagtcctagttgtagtgtatgatctttatggtagacttgattttagtaagattggtatcccctt |
508 |
Q |
| |
|
||| |||| | |||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| ||||||| | |||||||| ||||||| |
|
|
| T |
36201206 |
ctcatcttatttgtgctaagatgaaggagctgcaaacagtcctagttgtactgtatgatcttcatggtagatttgatttaggggagattggtgtcccctt |
36201107 |
T |
|
| Q |
509 |
tggtgaagatcataatggttgcaagatattgctcacatctacaagtttggaggttttatctgagcaaatgaaggttcataaattgatacaattgtgagag |
608 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||| || ||||||| ||||||||||||| ||| || | |||| |
|
|
| T |
36201106 |
tggtgaagatcataatggttgcaaggtattgctcacacctaaaagtgtggaggttttatccgaacaaatgacagttcataaattgacacagttatcagag |
36201007 |
T |
|
| Q |
609 |
acatgacatga-ttctcttccaacaagagcgtttgtagcagagatgatgaaaatcataagtccaaacatgcacatcgtttggaaaacaccatgttggaga |
707 |
Q |
| |
|
|||||| |||| |||| |||| || ||| ||||| ||||||| ||| ||||| ||| |||||||||||||| | |||||| ||||||||||||| |
|
|
| T |
36201006 |
acatgatatgatttcttttcctactagactgtttgaagcagagttgacgaaaacttgtagttcaaacatgcacatcatatggaaagcaccatgttggagt |
36200907 |
T |
|
| Q |
708 |
gattagaggttgagaagtgcttttgtaggtatagatgaactaagattttgt |
758 |
Q |
| |
|
|||||| |||||| | |||| | ||| ||| |||||||||||||||||||| |
|
|
| T |
36200906 |
gattagtggttgacaggtgc-tgtgttggtgtagatgaactaagattttgt |
36200857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 665 - 746
Target Start/End: Complemental strand, 36198958 - 36198878
Alignment:
| Q |
665 |
aagtccaaacatgcacatcgtttggaaaacaccatgttggagagattagaggttgagaagtgcttttgtaggtatagatgaa |
746 |
Q |
| |
|
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
| T |
36198958 |
aagtctaaacatgcacatcctttggaaaacacaatgttggagagattagagattggtaagtgctttt-taggtatagatgaa |
36198878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 645 - 757
Target Start/End: Complemental strand, 36214833 - 36214722
Alignment:
| Q |
645 |
gcagagatgatgaaaatcataagtccaaacatgcacatcgtttggaaaacaccatgttggagagattagaggttgagaagtgcttttgtaggtatagatg |
744 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||| | |||||||||||| ||||||| |||||||||| |||| |||||| ||||| ||||||||| |
|
|
| T |
36214833 |
gcagagatggtgaaaatttgaagtccaaacatgcactttatttggaaaacacaatgttggggagattagagattgacaagtgc-tttgttggtatagatc |
36214735 |
T |
|
| Q |
745 |
aactaagattttg |
757 |
Q |
| |
|
|| ||||| |||| |
|
|
| T |
36214734 |
aattaagactttg |
36214722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 36214932 - 36214872
Alignment:
| Q |
230 |
ataagaagagccgagacagatctattgttccaaaagattgtcacaacaactgtgacaaaga |
290 |
Q |
| |
|
||||||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
36214932 |
ataagaagagctgagagagatcaattgttccaaaagattgtcacagcaactgtgacaaaga |
36214872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 36188865 - 36188805
Alignment:
| Q |
230 |
ataagaagagccgagacagatctattgttccaaaagattgtcacaacaactgtgacaaaga |
290 |
Q |
| |
|
||||||| ||| |||| ||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36188865 |
ataagaacagctgagaaagatcaattgttccaaaagattgtcacaacaactgtaacaaaga |
36188805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 36210346 - 36210286
Alignment:
| Q |
230 |
ataagaagagccgagacagatctattgttccaaaagattgtcacaacaactgtgacaaaga |
290 |
Q |
| |
|
||||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
36210346 |
ataagaagagcagagaaagatcattcgttccaaaagattgtcacaacaactgtgacaaaga |
36210286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 290
Target Start/End: Complemental strand, 36202852 - 36202727
Alignment:
| Q |
165 |
aaggagaaaatttaatcggactatgtggtctagataaaagagtcaaggcttgtatgaaaaccgtcataagaagagccgagacagatctattgttccaaaa |
264 |
Q |
| |
|
|||||||||| |||| ||| |||| || | |||| ||||||||||||||| | | | |||||| || |||||| | |||| ||||| ||||||| |||| |
|
|
| T |
36202852 |
aaggagaaaacataattggattatgcgggccagatgaaagagtcaaggcttctgtcacaaccgttatgagaagatctgagagagatcaattgttcgaaaa |
36202753 |
T |
|
| Q |
265 |
gattgtcacaacaactgtgacaaaga |
290 |
Q |
| |
|
|||||||||| |||| ||||| |||| |
|
|
| T |
36202752 |
gattgtcacagcaaccgtgacgaaga |
36202727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 290
Target Start/End: Complemental strand, 36208324 - 36208199
Alignment:
| Q |
165 |
aaggagaaaatttaatcggactatgtggtctagataaaagagtcaaggcttgtatgaaaaccgtcataagaagagccgagacagatctattgttccaaaa |
264 |
Q |
| |
|
||||||||||| |||||||| |||| || | |||||||| ||||||| || | | ||||| | ||||| ||| |||| ||||| |||||||||||| |
|
|
| T |
36208324 |
aaggagaaaatataatcggattatgcgggccagataaaatagtcaagcattctgttaaaacatctagaagaaaagctgagagagatcaattgttccaaaa |
36208225 |
T |
|
| Q |
265 |
gattgtcacaacaactgtgacaaaga |
290 |
Q |
| |
|
|||||||||| |||||||||| |||| |
|
|
| T |
36208224 |
gattgtcacagcaactgtgaccaaga |
36208199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 36185073 - 36185015
Alignment:
| Q |
232 |
aagaagagccgagacagatctattgttccaaaagattgtcacaacaactgtgacaaaga |
290 |
Q |
| |
|
||||| ||| |||| ||||| |||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
36185073 |
aagaaaagctgagagagatcaattgttccaaaagattgtcacagcaactgtgaccaaga |
36185015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 36213694 - 36213650
Alignment:
| Q |
230 |
ataagaagagccgagacagatctattgttccaaaagattgtcaca |
274 |
Q |
| |
|
||||||||||| |||| ||||| |||||||||||||||||||||| |
|
|
| T |
36213694 |
ataagaagagctgagagagatcaattgttccaaaagattgtcaca |
36213650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 36183484 - 36183441
Alignment:
| Q |
400 |
cagaaagagctcttcttctgtgtgctaagatgaaagagctgcaa |
443 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| ||||||||| |
|
|
| T |
36183484 |
cagaaagagctcttattttgtgtgctaagatgaaggagctgcaa |
36183441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 36201400 - 36201342
Alignment:
| Q |
230 |
ataagaagagccgagacagatctattgttccaaaagattgtcacaacaactgtgacaaaga |
290 |
Q |
| |
|
||||||||||| |||| |||| |||||||||||||| ||||||| |||||||||| |||| |
|
|
| T |
36201400 |
ataagaagagctgaga--gatcaattgttccaaaagactgtcacagcaactgtgaccaaga |
36201342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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