View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17883_low_24 (Length: 320)
Name: NF17883_low_24
Description: NF17883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17883_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 18 - 309
Target Start/End: Original strand, 36551473 - 36551765
Alignment:
| Q |
18 |
cttcttcgcttccggcctcatcgttaatttctttcaggtctgtttctttggattcatcgacatgggtttttcttaactaaccaaacttactttgtttcta |
117 |
Q |
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| T |
36551473 |
cttcttcgcttccggcctcatcgttaatttctttcaggtctgtttctttggattcatcgacatgggtttttcttaactaaccaaacatactttgtttcta |
36551572 |
T |
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| Q |
118 |
tcaacatgcaaatcttgccttctgttacttatactcttcaatttgttacttctccaactatgttatttgctactatgtcaaaacccactacccaactgat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36551573 |
tcaacatgcaaatcttgccttctgttacttatactcttcaatttgttacttctccaactatgttatttgctactatgtcaaaacccactacccaactgat |
36551672 |
T |
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| Q |
218 |
tcaaatctgaaatcacccaagttggttctcaattagatc-tttactcagttaagcacttgtttgaattgacttatttgaacttacctgatgat |
309 |
Q |
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|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36551673 |
tcaaatctgaaatcacccaagtgggttctcaattagatcttttactcagttaagcacttgtttgaattgacttatttgaacttacctgatgat |
36551765 |
T |
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