View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17885_high_17 (Length: 250)
Name: NF17885_high_17
Description: NF17885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17885_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 4530905 - 4530715
Alignment:
| Q |
18 |
attgccatgccaaagatttctcagcttacatgtgtatctgcttctcattatatatttttagaaagatttgcttttaaagaagaaaagcgtttattagggt |
117 |
Q |
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| T |
4530905 |
attgccatgccaaagatttctcagcatacatgtgtatctgcttctcattatatatttttagaaagatttgcttttaaagaagaaaagcgtttattagggt |
4530806 |
T |
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| Q |
118 |
caaattcatttcataaaactttcaattttttgcatattaaagaagattttgtggcatagattggttacttattaatgaagcagataccacc |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4530805 |
caaattcatttcataaaactttcaattttttgcatattaaagaagattttgtggcatagattggttacttattaatgaagcagataccacc |
4530715 |
T |
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