View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17886_high_23 (Length: 278)
Name: NF17886_high_23
Description: NF17886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17886_high_23 |
 |  |
|
| [»] scaffold0029 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 31093727 - 31093987
Alignment:
| Q |
1 |
tccacgcaccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttatta |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
31093727 |
tccacgcaccatattgttgtggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgaggg-tgtttctgttttatta |
31093825 |
T |
 |
| Q |
101 |
tctctaaggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttct-actaat |
199 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
31093826 |
tctctatggatttttttagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttctgactaat |
31093925 |
T |
 |
| Q |
200 |
cttttttgacaatatgtcagtattacaccctattggaaagtttcctggaatcactagctcaa |
261 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
31093926 |
cttttttgacaatatgtcagtattacaccctattggaaagtttcctgaaaccactagctcaa |
31093987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 13002927 - 13003185
Alignment:
| Q |
1 |
tccacgcaccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttatta |
100 |
Q |
| |
|
||||| ||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
13002927 |
tccacacaccatattgttgtggtgtttgatataaacgcttggcatcgttgtaataatcaaaatatactatcttagcttgagggt-gtttctgttttattg |
13003025 |
T |
 |
| Q |
101 |
tctctaaggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttct-actaat |
199 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
13003026 |
tctctatggatttttttagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttctgactaat |
13003125 |
T |
 |
| Q |
200 |
cttttttgacaatatgtcagtattacaccctattggaaagtttcctggaatcactagctc |
259 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |
|
|
| T |
13003126 |
cttttttgacaatatgtcagtattacaccccattggaaagttccctggaaccactagctc |
13003185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 31252659 - 31252401
Alignment:
| Q |
1 |
tccacgcaccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttatta |
100 |
Q |
| |
|
||||| ||||||| ||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
31252659 |
tccacacaccatactgttgaggtgtttgatataaacgcttggcatcgttgtaataatcaaaatatactatcttagcttgagggt-gtttctgttttattg |
31252561 |
T |
 |
| Q |
101 |
tctctaaggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttct-actaat |
199 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
31252560 |
tctctatggatttttttagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttctgactaat |
31252461 |
T |
 |
| Q |
200 |
cttttttgacaatatgtcagtattacaccctattggaaagtttcctggaatcactagctc |
259 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |
|
|
| T |
31252460 |
cttttttgacaatatgtcagtattacaccccattggaaagttccctggaaccactagctc |
31252401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 8 - 261
Target Start/End: Complemental strand, 16163342 - 16163089
Alignment:
| Q |
8 |
accatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttattatctctaa |
107 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| | ||||||| || | |||||| |
|
|
| T |
16163342 |
accatattgttgtggtgcttcatataaacgtttggcatcgttgtagtagtcaaaatatattatcttagcttgaggat-gtttctgccgtaatgtctctat |
16163244 |
T |
 |
| Q |
108 |
ggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttct-actaatctttttt |
206 |
Q |
| |
|
||| || ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||||||| | |||||||||||| |
|
|
| T |
16163243 |
ggatttttttagttgctcattaaagtattcgatgaaagagttgtaagctattaaacatccaaattcatcataatcctctttcttttggctaatctttttt |
16163144 |
T |
 |
| Q |
207 |
gacaatatgtcagtattacaccctattggaaagtttcctggaatcactagctcaa |
261 |
Q |
| |
|
| |||||||||| |||||| || ||||||||||| ||||||| ||||||||||| |
|
|
| T |
16163143 |
gtcaatatgtcaacattacatcccattggaaagttacctggaaccactagctcaa |
16163089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 121 - 256
Target Start/End: Complemental strand, 27229227 - 27229091
Alignment:
| Q |
121 |
tgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttct-actaatcttttttgacaatatgtcag |
219 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||| || | |||||||| | |
|
|
| T |
27229227 |
tgctcattatagtattcgatgaaagtgttgtaagttatcaaacatccaaattcatcataatcttctttcttctgactattcaccctccacaatatgccga |
27229128 |
T |
 |
| Q |
220 |
tattacaccctattggaaagtttcctggaatcactag |
256 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |
|
|
| T |
27229127 |
cattacaccctattggaaagtttcctggaaccactag |
27229091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 259
Target Start/End: Complemental strand, 25658759 - 25658507
Alignment:
| Q |
7 |
caccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttattatctcta |
106 |
Q |
| |
|
|||||||||| || |||| |||||||||||||||| || |||||| ||||||||||||| |||||||||||||||| | ||| ||| ||| | |||||| |
|
|
| T |
25658759 |
caccatattgctgtggtgtttgatataaacgtttgagattgttgtagtagtcaaaatatattatcttagcttgaggg-tatttatgtcttaatgtctcta |
25658661 |
T |
 |
| Q |
107 |
aggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttc-tactaatcttttt |
205 |
Q |
| |
|
|| || || ||||| |||||||| ||||| ||||||||||||| || |||| |||||||||||||||||||||| |||||||| || |
|
|
| T |
25658660 |
tagaatttttaagttgttcattgtagtattcggcgaaagcattgtaagctatcaggcacccaagttcatcatagtcttctttcttcgtactaatcaaatt |
25658561 |
T |
 |
| Q |
206 |
tgacaatatgtcagtattacaccctattggaaagtttcctggaatcactagctc |
259 |
Q |
| |
|
|| ||| | ||| ||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
25658560 |
tgtcaacacaccagcattacacccaattggaaagtttccaggaatcactagctc |
25658507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 259
Target Start/End: Complemental strand, 25665164 - 25664912
Alignment:
| Q |
7 |
caccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttattatctcta |
106 |
Q |
| |
|
|||||||||| || |||| |||||||||||||||| || |||||| ||||||||||||| |||||||||||||||| | ||| ||| ||| | |||||| |
|
|
| T |
25665164 |
caccatattgctgtggtgtttgatataaacgtttgagattgttgtagtagtcaaaatatattatcttagcttgaggg-tatttatgtcttaatgtctcta |
25665066 |
T |
 |
| Q |
107 |
aggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttc-tactaatcttttt |
205 |
Q |
| |
|
|| || || ||||| |||||||| ||||| ||||||||||||| || |||| |||||||||||||||||||||| |||||||| || |
|
|
| T |
25665065 |
tagaatttttaagttgttcattgtagtattcggcgaaagcattgtaagctatcaggcacccaagttcatcatagtcttctttcttcgtactaatcaaatt |
25664966 |
T |
 |
| Q |
206 |
tgacaatatgtcagtattacaccctattggaaagtttcctggaatcactagctc |
259 |
Q |
| |
|
|| ||| | ||| ||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
25664965 |
tgtcaacacaccagcattacacccaattggaaagtttccaggaatcactagctc |
25664912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 259
Target Start/End: Complemental strand, 25671569 - 25671317
Alignment:
| Q |
7 |
caccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttattatctcta |
106 |
Q |
| |
|
|||||||||| || |||| |||||||||||||||| || |||||| ||||||||||||| |||||||||||||||| | ||| ||| ||| | |||||| |
|
|
| T |
25671569 |
caccatattgctgtggtgtttgatataaacgtttgagattgttgtagtagtcaaaatatattatcttagcttgaggg-tatttatgtcttaatgtctcta |
25671471 |
T |
 |
| Q |
107 |
aggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttc-tactaatcttttt |
205 |
Q |
| |
|
|| || || ||||| |||||||| ||||| ||||||||||||| || |||| |||||||||||||||||||||| |||||||| || |
|
|
| T |
25671470 |
tagaatttttaagttgttcattgtagtattcggcgaaagcattgtaagctatcaggcacccaagttcatcatagtcttctttcttcgtactaatcaaatt |
25671371 |
T |
 |
| Q |
206 |
tgacaatatgtcagtattacaccctattggaaagtttcctggaatcactagctc |
259 |
Q |
| |
|
|| ||| | ||| ||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
25671370 |
tgtcaacacaccagcattacacccaattggaaagtttccaggaatcactagctc |
25671317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 259
Target Start/End: Complemental strand, 25677974 - 25677722
Alignment:
| Q |
7 |
caccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttattatctcta |
106 |
Q |
| |
|
|||||||||| || |||| |||||||||||||||| || |||||| ||||||||||||| |||||||||||||||| | ||| ||| ||| | |||||| |
|
|
| T |
25677974 |
caccatattgctgtggtgtttgatataaacgtttgagattgttgtagtagtcaaaatatattatcttagcttgaggg-tatttatgtcttaatgtctcta |
25677876 |
T |
 |
| Q |
107 |
aggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttc-tactaatcttttt |
205 |
Q |
| |
|
|| || || ||||| |||||||| ||||| ||||||||||||| || |||| |||||||||||||||||||||| |||||||| || |
|
|
| T |
25677875 |
tagaatttttaagttgttcattgtagtattcggcgaaagcattgtaagctatcaggcacccaagttcatcatagtcttctttcttcgtactaatcaaatt |
25677776 |
T |
 |
| Q |
206 |
tgacaatatgtcagtattacaccctattggaaagtttcctggaatcactagctc |
259 |
Q |
| |
|
|| ||| | ||| ||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
25677775 |
tgtcaacacaccagcattacacccaattggaaagtttccaggaatcactagctc |
25677722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 259
Target Start/End: Complemental strand, 25684650 - 25684398
Alignment:
| Q |
7 |
caccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttattatctcta |
106 |
Q |
| |
|
|||||||||| || |||| |||||||||||||||| || |||||| ||||||||||||| |||||||||||||||| | ||| ||| ||| | |||||| |
|
|
| T |
25684650 |
caccatattgctgtggtgtttgatataaacgtttgagattgttgtagtagtcaaaatatattatcttagcttgaggg-tatttatgtcttaatgtctcta |
25684552 |
T |
 |
| Q |
107 |
aggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttc-tactaatcttttt |
205 |
Q |
| |
|
|| || || ||||| |||||||| ||||| ||||||||||||| || |||| |||||||||||||||||||||| |||||||| || |
|
|
| T |
25684551 |
tagaatttttaagttgttcattgtagtattcggcgaaagcattgtaagctatcaggcacccaagttcatcatagtcttctttcttcgtactaatcaaatt |
25684452 |
T |
 |
| Q |
206 |
tgacaatatgtcagtattacaccctattggaaagtttcctggaatcactagctc |
259 |
Q |
| |
|
|| ||| | ||| ||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
25684451 |
tgtcaacacaccagcattacacccaattggaaagtttccaggaatcactagctc |
25684398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 241
Target Start/End: Complemental strand, 27206680 - 27206446
Alignment:
| Q |
9 |
ccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttattatctctaag |
108 |
Q |
| |
|
|||||||||| |||||||| |||||||||||| |||| |||||| |||||| |||||||||||||||||||||| |||| || ||| | ||| || | |
|
|
| T |
27206680 |
ccatattgttctggtgcttggtataaacgtttgacatcattgtaaacgtcaaagtatactatcttagcttgagggt-gtttatgccttagtgtctttatg |
27206582 |
T |
 |
| Q |
109 |
gannnnnnnagctgctc--attaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttct-actaatcttttt |
205 |
Q |
| |
|
|| || | | ||||||||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||| || |
|
|
| T |
27206581 |
gattttttaagttttttttattaaagtattttatgaaagagttgtatgctatcaaacatccaaatttatcatagtcttctttcttctgactaatcttatt |
27206482 |
T |
 |
| Q |
206 |
tgacaatatgtcagtattacaccctattggaaagtt |
241 |
Q |
| |
|
|||||||| || || | |||| |||||||| ||||| |
|
|
| T |
27206481 |
tgacaataagtgagcagtacatcctattgggaagtt |
27206446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 33120609 - 33120792
Alignment:
| Q |
7 |
caccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttattatctcta |
106 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| || || |||||||| |||| ||||||| ||| |||| || |||||| ||| | |||||| |
|
|
| T |
33120609 |
caccatattgttgcggtgtttgatataaacgtttggcatcattatagtagtcaaagtatattatcttaacttcaggg-tgcttctgtcttagtgtctcta |
33120707 |
T |
 |
| Q |
107 |
aggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttctt |
191 |
Q |
| |
|
|| || ||| |||||||||| |||| ||| | ||||||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
33120708 |
tagaattttttagttgcccattaaagtactcgactaaattattgtaagctattaagcacccaaattcatcatagtcttctttctt |
33120792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 33130352 - 33130535
Alignment:
| Q |
7 |
caccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttattatctcta |
106 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| || || |||||||| |||| ||||||| ||| |||| || |||||| ||| | |||||| |
|
|
| T |
33130352 |
caccatattgttgcggtgtttgatataaacgtttggcatcattatagtagtcaaagtatattatcttaacttcaggg-tgcttctgtcttagtgtctcta |
33130450 |
T |
 |
| Q |
107 |
aggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttctt |
191 |
Q |
| |
|
|| || ||| |||||||||| |||| ||| | ||||||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
33130451 |
tagaattttttagttgcccattaaagtactcgactaaattattgtaagctattaagcacccaaattcatcatagtcttctttctt |
33130535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 19112509 - 19112443
Alignment:
| Q |
7 |
caccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatctt |
73 |
Q |
| |
|
|||| ||||||| ||||||| ||||||||||||||| | ||||| ||||||||||||| |||||| |
|
|
| T |
19112509 |
caccgtattgttctggtgcttcgtataaacgtttggcagcattgtagtagtcaaaatatattatctt |
19112443 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 19117318 - 19117257
Alignment:
| Q |
12 |
tattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatctt |
73 |
Q |
| |
|
||||||| ||||||| ||||||||||||||| | ||||| ||||||||||||| |||||| |
|
|
| T |
19117318 |
tattgttctggtgcttcgtataaacgtttggcagcattgtagtagtcaaaatatattatctt |
19117257 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 18364 - 18547
Alignment:
| Q |
7 |
caccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttattatctcta |
106 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| || || |||||||| |||| ||||||| ||| |||| || |||||| ||| | |||||| |
|
|
| T |
18364 |
caccatattgttgcggtgtttgatataaacgtttggcatcattatagtagtcaaagtatattatcttaacttcaggg-tgcttctgtcttagtgtctcta |
18462 |
T |
 |
| Q |
107 |
aggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttctt |
191 |
Q |
| |
|
|| || ||| | |||||||| || || ||| | ||||||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
18463 |
tagaattttttagttgcccgttaaagtactctattaaattattgtaagctattaagcacccaaattcatcatagtcttctttctt |
18547 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 43376 - 43559
Alignment:
| Q |
7 |
caccatattgttgcggtgcttgatataaacgtttggcatcgttgtaatagtcaaaatatactatcttagcttgagggttgtttctgttttattatctcta |
106 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||||| || || |||||||| |||| ||||||| ||| |||| || |||||| ||| | |||||| |
|
|
| T |
43376 |
caccatattgttgcggtgtttgatataaacatttggcatcattatagtagtcaaagtatattatcttaacttcaggg-tgcttctgtcttagtgtctcta |
43474 |
T |
 |
| Q |
107 |
aggannnnnnnagctgctcattaaagtattcgatgaaagtgttgtaagctatcaaacatccaaattcatcatagtcttctttctt |
191 |
Q |
| |
|
|| || ||| | |||||||| || || ||| | ||||||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
43475 |
tagaattttttagttgcccgttaaagtactctattaaattattgtaagctattaagcacccaaattcatcatagtcttctttctt |
43559 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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