View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17886_low_29 (Length: 237)
Name: NF17886_low_29
Description: NF17886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17886_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 27429937 - 27429716
Alignment:
| Q |
1 |
aaaagtaatgtaaatttgtgcaacactatgtaacaatggacttggatttgaacatgatggatgaagaacacatgattgagagaagagagcacactaaaga |
100 |
Q |
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| T |
27429937 |
aaaagtaatgtaaatttgtgcaacactatgtaacaatggacttggatttgaacatgatggatgaagaacacatgattgagagaagagaccacactaaaga |
27429838 |
T |
|
| Q |
101 |
tggttagacaaatttctcgacagatattaatcattgacaaagtcggtcaatatcatcatggttnnnnnnnnncttgtgcaagatgcagtacgacgagagg |
200 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
27429837 |
tggttagacaaatttctcgacagatattaatcatcgacaaagtcggtcaatatcatcatggttaaaaaaaaacttgtgcaagatgcagtacgacgagagg |
27429738 |
T |
|
| Q |
201 |
ttatatatatatggtggtagct |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
27429737 |
ttatatatatatggtggtagct |
27429716 |
T |
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