View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1788_high_12 (Length: 278)
Name: NF1788_high_12
Description: NF1788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1788_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 16 - 265
Target Start/End: Complemental strand, 42821056 - 42820807
Alignment:
| Q |
16 |
agaggaacttcaatttataagtagataatttaatgagcaaatatccccaaactgacaaaattttaagtggttgatattcattataacaattaacaactga |
115 |
Q |
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| T |
42821056 |
agaggaacttcaatttataagtagataatttaatgagcaaatatccccaaactgacaaaattttaagtggttgatattcattataacaattaacaactga |
42820957 |
T |
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| Q |
116 |
taaatgacagataccaattagtcaactgtacaacagaattagtgctactaaccgaaattattttcaggagaaacttaggcaaaccgtcattcttcatcgt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42820956 |
taaatgacagataccaattagtcaactgtacaacagaattagtgctactaaccgaaattattttcaggagaaacttaggcaaaccgtcattcttcatcgt |
42820857 |
T |
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| Q |
216 |
cttctcatttcaagtgttcccaaattcagctaacatgtctgtatcttgtt |
265 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
42820856 |
cttctaatttcaagtgttcccaaattcagctaacatgtctgtatcctgtt |
42820807 |
T |
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