View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17891_low_9 (Length: 255)

Name: NF17891_low_9
Description: NF17891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17891_low_9
NF17891_low_9
[»] chr2 (23 HSPs)
chr2 (22-255)||(38190755-38190988)
chr2 (22-255)||(37170943-37171177)
chr2 (116-255)||(12781412-12781551)
chr2 (116-255)||(17943389-17943528)
chr2 (116-255)||(35894452-35894592)
chr2 (116-255)||(22712707-22712847)
chr2 (116-255)||(30478845-30478985)
chr2 (116-255)||(20054956-20055096)
chr2 (76-255)||(20050213-20050395)
chr2 (116-255)||(27517830-27517972)
chr2 (116-255)||(33674596-33674736)
chr2 (116-255)||(17932485-17932625)
chr2 (116-255)||(22717416-22717556)
chr2 (107-255)||(17462279-17462427)
chr2 (107-255)||(39686826-39686974)
chr2 (107-255)||(45567252-45567400)
chr2 (116-255)||(2736058-2736196)
chr2 (116-255)||(2740794-2740932)
chr2 (107-255)||(39679888-39680036)
chr2 (22-152)||(28462589-28462718)
chr2 (175-255)||(30261964-30262043)
chr2 (190-255)||(33603920-33603985)
chr2 (20-136)||(35107119-35107236)
[»] chr1 (14 HSPs)
chr1 (20-255)||(25133827-25134062)
chr1 (22-255)||(2393473-2393707)
chr1 (119-255)||(21353537-21353674)
chr1 (116-255)||(9526317-9526457)
chr1 (119-255)||(3091297-3091433)
chr1 (159-255)||(4144874-4144970)
chr1 (107-255)||(2232440-2232588)
chr1 (140-255)||(9521589-9521706)
chr1 (75-153)||(2401489-2401568)
chr1 (197-255)||(2401412-2401470)
chr1 (22-255)||(46782897-46783134)
chr1 (155-255)||(14996931-14997031)
chr1 (96-154)||(4144993-4145051)
chr1 (166-255)||(20566860-20566946)
[»] chr3 (31 HSPs)
chr3 (23-255)||(27762177-27762408)
chr3 (19-255)||(10949451-10949686)
chr3 (22-254)||(11079275-11079507)
chr3 (22-255)||(47883073-47883306)
chr3 (14-255)||(38002618-38002860)
chr3 (21-255)||(20031509-20031740)
chr3 (22-222)||(48390444-48390645)
chr3 (35-255)||(4535380-4535605)
chr3 (116-255)||(5858397-5858537)
chr3 (116-255)||(47878362-47878502)
chr3 (116-255)||(10612969-10613109)
chr3 (116-255)||(10896856-10896996)
chr3 (117-248)||(54193077-54193209)
chr3 (116-248)||(54188359-54188492)
chr3 (116-255)||(10595225-10595362)
chr3 (30-248)||(13893228-13893445)
chr3 (116-255)||(29914144-29914284)
chr3 (118-255)||(22626175-22626312)
chr3 (116-255)||(16462054-16462194)
chr3 (107-255)||(6303153-6303301)
chr3 (116-255)||(10094265-10094403)
chr3 (116-255)||(10201145-10201283)
chr3 (116-255)||(10208191-10208329)
chr3 (76-255)||(27544084-27544264)
chr3 (166-255)||(3329794-3329884)
chr3 (116-255)||(10100282-10100420)
chr3 (25-254)||(46966840-46967064)
chr3 (148-232)||(7417953-7418037)
chr3 (127-255)||(16996737-16996866)
chr3 (175-227)||(7768563-7768614)
chr3 (179-255)||(15823801-15823876)
[»] chr7 (29 HSPs)
chr7 (20-255)||(44144057-44144292)
chr7 (22-255)||(42006422-42006654)
chr7 (116-255)||(25409982-25410121)
chr7 (116-255)||(34547054-34547194)
chr7 (116-255)||(25351205-25351344)
chr7 (116-255)||(25356899-25357038)
chr7 (116-255)||(7464709-7464849)
chr7 (119-255)||(44016852-44016989)
chr7 (116-255)||(30246821-30246961)
chr7 (76-255)||(44512716-44512898)
chr7 (119-251)||(44010945-44011078)
chr7 (122-255)||(8378695-8378829)
chr7 (116-255)||(7069633-7069771)
chr7 (116-255)||(7074640-7074778)
chr7 (116-255)||(25405246-25405384)
chr7 (180-255)||(1099625-1099700)
chr7 (175-255)||(2120809-2120890)
chr7 (159-255)||(21369536-21369633)
chr7 (125-248)||(6067399-6067522)
chr7 (140-255)||(15541186-15541301)
chr7 (107-255)||(3320241-3320389)
chr7 (107-255)||(3324989-3325137)
chr7 (172-244)||(26210562-26210633)
chr7 (219-255)||(1099725-1099761)
chr7 (71-146)||(45366451-45366526)
chr7 (175-244)||(6048894-6048963)
chr7 (175-244)||(11081531-11081600)
chr7 (22-150)||(22392328-22392457)
chr7 (45-136)||(26804452-26804543)
[»] chr4 (31 HSPs)
chr4 (20-255)||(4569851-4570085)
chr4 (22-255)||(25699507-25699740)
chr4 (22-255)||(4556250-4556486)
chr4 (116-255)||(18586817-18586957)
chr4 (116-255)||(16489201-16489340)
chr4 (76-255)||(31300233-31300415)
chr4 (76-255)||(4884682-4884865)
chr4 (116-255)||(15830992-15831132)
chr4 (73-255)||(16638636-16638818)
chr4 (22-255)||(16689131-16689368)
chr4 (117-255)||(8529119-8529258)
chr4 (116-252)||(15316809-15316946)
chr4 (14-169)||(7050510-7050662)
chr4 (96-255)||(13072172-13072330)
chr4 (116-255)||(15312173-15312307)
chr4 (159-255)||(47566387-47566484)
chr4 (175-255)||(36769389-36769470)
chr4 (116-255)||(11853402-11853540)
chr4 (175-255)||(36771306-36771387)
chr4 (159-240)||(4558205-4558287)
chr4 (175-255)||(25614111-25614191)
chr4 (183-255)||(55822184-55822256)
chr4 (192-255)||(7050448-7050511)
chr4 (190-255)||(26557664-26557729)
chr4 (175-255)||(32274093-32274172)
chr4 (175-255)||(4874670-4874750)
chr4 (119-151)||(4558133-4558165)
chr4 (67-150)||(9148197-9148279)
chr4 (190-255)||(3982369-3982434)
chr4 (119-153)||(36769301-36769335)
chr4 (175-244)||(52043579-52043648)
[»] chr6 (24 HSPs)
chr6 (19-255)||(13467654-13467891)
chr6 (22-255)||(26642934-26643167)
chr6 (22-255)||(26748900-26749133)
chr6 (22-255)||(33215583-33215818)
chr6 (113-255)||(22352043-22352186)
chr6 (76-255)||(17695042-17695223)
chr6 (116-255)||(25466090-25466230)
chr6 (113-254)||(22342993-22343135)
chr6 (116-255)||(25941496-25941635)
chr6 (120-255)||(5166007-5166141)
chr6 (140-255)||(3577705-3577821)
chr6 (107-255)||(13878570-13878718)
chr6 (183-255)||(17035974-17036046)
chr6 (116-255)||(13883328-13883466)
chr6 (116-255)||(31248905-31249043)
chr6 (116-255)||(35201517-35201655)
chr6 (175-255)||(19702053-19702134)
chr6 (107-255)||(26887415-26887563)
chr6 (116-255)||(16785772-16785910)
chr6 (199-255)||(12166337-12166394)
chr6 (175-255)||(24542865-24542944)
chr6 (45-150)||(8995383-8995488)
chr6 (45-150)||(9019830-9019935)
chr6 (176-244)||(6843178-6843246)
[»] chr8 (22 HSPs)
chr8 (22-255)||(23179752-23179986)
chr8 (20-252)||(3276098-3276332)
chr8 (76-255)||(21033679-21033861)
chr8 (116-255)||(590645-590785)
chr8 (76-255)||(9021298-9021479)
chr8 (116-255)||(29554976-29555116)
chr8 (124-255)||(2267214-2267346)
chr8 (116-255)||(28895353-28895493)
chr8 (175-255)||(33032565-33032645)
chr8 (107-255)||(28327751-28327899)
chr8 (107-255)||(16752713-16752862)
chr8 (161-255)||(17799615-17799709)
chr8 (175-255)||(26268421-26268501)
chr8 (116-255)||(4812678-4812816)
chr8 (107-255)||(16757458-16757607)
chr8 (116-255)||(25684496-25684634)
chr8 (159-255)||(30423106-30423203)
chr8 (107-255)||(28332474-28332622)
chr8 (190-255)||(17847604-17847669)
chr8 (124-255)||(15949394-15949525)
chr8 (124-255)||(15944733-15944864)
chr8 (175-227)||(28228425-28228476)
[»] chr5 (18 HSPs)
chr5 (20-255)||(17841440-17841676)
chr5 (22-255)||(42238059-42238294)
chr5 (22-255)||(40222519-40222754)
chr5 (116-255)||(22672685-22672825)
chr5 (114-255)||(1240277-1240419)
chr5 (116-255)||(35385643-35385783)
chr5 (119-255)||(11962624-11962759)
chr5 (116-255)||(25445343-25445483)
chr5 (119-248)||(10627217-10627347)
chr5 (116-255)||(2298192-2298332)
chr5 (116-255)||(25452346-25452486)
chr5 (120-255)||(16093481-16093617)
chr5 (107-255)||(1170654-1170802)
chr5 (164-255)||(31782648-31782740)
chr5 (124-255)||(26406664-26406795)
chr5 (141-255)||(25837984-25838098)
chr5 (166-255)||(28786308-28786395)
chr5 (45-150)||(4236498-4236603)
[»] scaffold0004 (1 HSPs)
scaffold0004 (116-255)||(188433-188573)
[»] scaffold0209 (1 HSPs)
scaffold0209 (116-254)||(17178-17317)
[»] scaffold0256 (1 HSPs)
scaffold0256 (116-255)||(16176-16316)
[»] scaffold0131 (1 HSPs)
scaffold0131 (107-255)||(30984-31132)
[»] scaffold0006 (1 HSPs)
scaffold0006 (119-255)||(224675-224810)
[»] scaffold1764 (1 HSPs)
scaffold1764 (116-219)||(1287-1391)


Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 38190755 - 38190988
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactt 121  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  38190755 cgtgccacgatgtaatcgtaacgtggcacgatggtacgctgaaggaaataacagaaacgtattttcagtgaagatttgttccatattatatgggttactt 38190854  T
Q  122 tccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttgg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||| | ||||||||||||    
T  38190855 tccactataaatataagtcttgtatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttataaataatttctcttgg 38190954  T
Q  222 caacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||||||||    
T  38190955 caacaacactagggttgggattgttttgattcac 38190988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 37171177 - 37170943
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactt 121  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  37171177 cgtgccacgatggaatcgtaacgtggcacgatggtgcgctgaaggaaataacaaaaacgtattttcagtgaagatttgttccatattttaagggttactt 37171078  T
Q  122 tccactataaatataagtcttgtatcagatgataaagtgtgta-taaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttg 220  Q
    ||||||||||||||||  |||||||||||||||||||||||||  ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  37171077 tccactataaatataaaccttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttg 37170978  T
Q  221 gcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||| ||||||||||||||||||| ||||    
T  37170977 gcaacaacaccagggttgggattgttttgaatcac 37170943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 12781551 - 12781412
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttc 215  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||| ||||||| ||||||| |||||||||||||||||    
T  12781551 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaacagggtttagaaaccaacattcaaactagggtttatagagaatttc 12781452  T
Q  216 tcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12781451 tcttggcaacaacactagggttgggattgttttgattcac 12781412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 17943389 - 17943528
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttc 215  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||  || ||||||||||||||||||||||| |||||||||||||||||    
T  17943389 ttactttccactataaatataagccttgtatcagatgataaggtgtgtagaaaatagggtttagaagccaacatacaaactatggtttatagagaatttc 17943488  T
Q  216 tcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17943489 tcttggcaacaacactagggttgggattgttttgattcac 17943528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 35894592 - 35894452
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  35894592 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 35894493  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35894492 ctcttggcaacaacactagggttgggattgttttgattcac 35894452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 22712847 - 22712707
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  22712847 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 22712748  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  22712747 ctcttggcaacaactctagggttgggattgttttgattcac 22712707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 30478845 - 30478985
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |  ||||||| ||||||||||||||| ||||||||||||||||    
T  30478845 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagagtttagaaaccaacatacaaactagggtttatagagaattt 30478944  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30478945 ctcttggcaacaacactagggttgggattgttttgattcac 30478985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 20055096 - 20054956
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || | ||||| ||||||||||||||||||||||||||||||||    
T  20055096 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtatagaaaccaacatacaaactaaggtttatagagaattt 20054997  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  20054996 ctctttgcaacaactctagggttgggattgttttgattcac 20054956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 76 - 255
Target Start/End: Complemental strand, 20050395 - 20050213
Alignment:
Q  76 aaacgtattttcaatgaagatttgttcca-tattataagggtt-actttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctg 172  Q
    ||||||||||||| | |||||||||| || | || |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |    
T  20050395 aaacgtattttcagtaaagatttgtttcagttttttaagggtttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacag 20050296  T
Q  173 gttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    | | ||||| ||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  20050295 ggtatagaaaccaacatacaaactagggtttatagaaaatttctctttgcaacaactctagggttgggattgttttgattcac 20050213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 27517972 - 27517830
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtata---aaactggttttagaagccaacatacaaactaaggtttatagagaat 212  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| ||   |||| || ||||||| ||||||||||||||| ||||||||||||||    
T  27517972 ttactttccactataaatataagccttgtatcaaatgataaagtgtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaat 27517873  T
Q  213 ttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  27517872 ttctctttgcaacaacactagggttgggattgttttgattcac 27517830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 33674736 - 33674596
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||| |||| | || ||||||| |||||||| |||||| |||||||||||||||    
T  33674736 ttactttccactataaataca-gtcttgtatcagatgataaaagtgtgtagaaaaacagggtttagaaaccaacatataaactatggtttatagagaatt 33674638  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33674637 tctcttggcaacaacactagggttgggattgttttgattcac 33674596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 17932485 - 17932625
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| | || |||| || ||||||||||||||| |||||||||||||||    
T  17932485 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacagggtttataaaccaacatacaaactagggtttatagagaatt 17932583  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17932584 tctcttggcaacaacactagggttgggattgttttgattcac 17932625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 22717556 - 22717416
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||| ||||||||||||||| |||||| ||||||||    
T  22717556 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttacagagaatt 22717458  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||| ||||||||  |||||||||||||||||||||||||    
T  22717457 tctcttagcaacaactatagggttgggattgttttgattcac 22717416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 255
Target Start/End: Original strand, 17462279 - 17462427
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||||    
T  17462279 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttt 17462375  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  17462376 atagagaatctctcttggcaacaactctagggttgggattgttttgattcac 17462427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 255
Target Start/End: Original strand, 39686826 - 39686974
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||||    
T  39686826 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttt 39686922  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  39686923 atagagaatctctcttggcaacaactctagggttgggattgttttgattcac 39686974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 255
Target Start/End: Original strand, 45567252 - 45567400
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||||    
T  45567252 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttt 45567348  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  45567349 atagagaatctctcttggcaacaactctagggttgggattgttttgattcac 45567400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 2736058 - 2736196
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  2736058 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 2736154  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  2736155 tctcttggcaacaactctagggttgggattgttttgattcac 2736196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 2740794 - 2740932
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  2740794 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 2740890  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  2740891 tctcttggcaacaactctagggttgggattgttttgattcac 2740932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 255
Target Start/End: Original strand, 39679888 - 39680036
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | |||| |  |||||| |||||||| |||||    
T  39679888 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaaa--ccaacaaacaaactagggttt 39679984  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  39679985 atagagaatctcttttggcaacaactctagggttgggattgttttgattcac 39680036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 28462718 - 28462589
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactt 121  Q
    |||| ||||||| ||||||||  ||| ||||||| |||| || ||  | || |||||| |||||||| || |||||||||||| ||| ||||||||||||    
T  28462718 cgtgtcacgatggaatcgtaatgtggtacgatgggacgccgatggcgaaaatagaaacatattttcagtgcagatttgttccaaattttaagggttactt 28462619  T
Q  122 tccactataaatataagtcttgtatcagatg 152  Q
    |  |||||||||||||  |||||||||||||    
T  28462618 t-tactataaatataaaccttgtatcagatg 28462589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 30262043 - 30261964
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcac 255  Q
    |||||||||||||| |||||||| |||||||||||  ||||||||||||| || ||||||||||| ||||||||||||||||    
T  30262043 tttagaagccaaca-acaaactacggtttatagagt-tttctcttggcaataaacactagggttgagattgttttgattcac 30261964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 33603920 - 33603985
Alignment:
Q  190 acaaactaaggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcac 255  Q
    |||||||| |||||||||||| ||||| |||||||||| || |||||||||||||||||||||||||    
T  33603920 acaaactagggtttatagaga-tttcttttggcaacaaacattagggttgggattgttttgattcac 33603985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 35107119 - 35107236
Alignment:
Q  20 aacgtgccacgatgtaatcgtaacatggcacgatggtacgctgaagga-aataacagaaacgtatttt-caatgaagatttgttccatattataagggtt 117  Q
    |||||| |||||||  |||||||| || |||  |||| |||||||||  ||||||| || |||||||| ||||| |||||||||||| ||| |||||| |    
T  35107119 aacgtgtcacgatgggatcgtaacgtgtcacattggtgcgctgaaggcgaataacataatcgtatttttcaatgcagatttgttccaaattttaagggat 35107218  T
Q  118 actttccactataaatata 136  Q
    |||||  ||||||||||||    
T  35107219 acttt-tactataaatata 35107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 20 - 255
Target Start/End: Original strand, 25133827 - 25134062
Alignment:
Q  20 aacgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttac 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||    
T  25133827 aacgtgccacgatgtaatcgtaacgtggcacgatggtacgctgaaggaaataacagaaacatattttcagtgaagatttgttccatattttaagggttac 25133926  T
Q  120 tttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctctt 219  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  25133927 tttccactataaatataagtcttgtatcagatgataaaatgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctctt 25134026  T
Q  220 ggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||| ||||| ||||||||||||||||    
T  25134027 ggcaacaacactatggttgtgattgttttgattcac 25134062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 2393707 - 2393473
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtatttt-caatgaagatttgttccatattataagggttact 120  Q
    ||||||||| |  ||||||| | ||||||||||||||||| | ||| ||    |||||||||||| || ||||||||||||||||||| |||||| || |    
T  2393707 cgtgccacggttgaatcgtatcgtggcacgatggtacgctaatggatatttttgaaacgtatttttcagtgaagatttgttccatattttaagggatatt 2393608  T
Q  121 ttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttg 220  Q
    |||||||||||||||||| |||||||||||||| |||  | ||| |||||  | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  2393607 ttccactataaatataagccttgtatcagatgaaaaacagagtagaaaacaaggtttagaagccaacatgcaaactaaggtttatagagaatttctcttg 2393508  T
Q  221 gcaacaacactagggttgggattgttttgattcac 255  Q
    |||| ||||||||||||||||||||||||||||||    
T  2393507 gcaataacactagggttgggattgttttgattcac 2393473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 119 - 255
Target Start/End: Complemental strand, 21353674 - 21353537
Alignment:
Q  119 ctttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctc 217  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||||||||||||||||||| |||||||||||||||||||    
T  21353674 ctttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctc 21353575  T
Q  218 ttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||| |||||||||||||||||||||||||||||||||    
T  21353574 ttggtaacaacactagggttgggattgttttgattcac 21353537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 9526317 - 9526457
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  9526317 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 9526416  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  9526417 ctcttggcaacaactctagggttgggattgttttgattcac 9526457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 119 - 255
Target Start/End: Complemental strand, 3091433 - 3091297
Alignment:
Q  119 ctttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctct 218  Q
    |||||||||||||||||||  ||||||||||||||  | ||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  3091433 ctttccactataaatataac-cttgtatcagatgaatatgtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctct 3091335  T
Q  219 tggcaac-aacactagggttgggattgttttgattcac 255  Q
    ||| ||| ||||||||||||| ||||||||||||||||    
T  3091334 tggtaacaaacactagggttgagattgttttgattcac 3091297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 4144970 - 4144874
Alignment:
Q  159 tgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||| ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  4144970 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaaaaacactagggttgagattgttttgattcac 4144874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 255
Target Start/End: Original strand, 2232440 - 2232588
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||||    
T  2232440 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttt 2232536  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||||||||    
T  2232537 atagagaatctctcttggcaacaactttagggttgggattgttttgattcac 2232588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 9521589 - 9521706
Alignment:
Q  140 cttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggtt 237  Q
    |||||||||||||||||| ||||||| |||| |  | ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||   ||||||||    
T  9521589 cttgtatcagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctcttggtaacatttctagggtt 9521688  T
Q  238 gggattgttttgattcac 255  Q
    ||||||||||||||||||    
T  9521689 gggattgttttgattcac 9521706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 2401568 - 2401489
Alignment:
Q  75 gaaacgtatttt-caatgaagatttgttccatattataagggttactttccactataaatataagtcttgtatcagatga 153  Q
    |||||||||||| || ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||    
T  2401568 gaaacgtatttttcagtgaagatttgttccatattttaagggatactttccactataaatataagccttgtatcagatga 2401489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 2401470 - 2401412
Alignment:
Q  197 aaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2401470 aaggtttatagagaatttctcttggcaacaacactagggttgagattgttttgattcac 2401412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 46782897 - 46783134
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaagg-aaataacagaaacgtattttcaa-tgaagatttgttccatattataagggttac 119  Q
    ||||||||||||  |||||||  ||||| ||||| |||||||||| ||| |||||||| | | ||| || || | |||||||||| ||| ||||||||||    
T  46782897 cgtgccacgatgagatcgtaatgtggcatgatggaacgctgaaggcaaaaaacagaaatgcacttttaagtgcatatttgttccaaattttaagggttac 46782996  T
Q  120 tttccactataaata---taagtcttgtatcagatgataaagtgtgtataaaact-ggttttagaagccaacatacaaactaaggtttatagagaatttc 215  Q
    |||  ||||||||||   |||  |||||||||||||| || ||  ||| |||| | || |||||||||||||| |||||||| ||||||||||||| ||     
T  46782997 tttt-actataaataatataaaccttgtatcagatgaaaatgta-gtagaaaaatagggtttagaagccaacaaacaaactatggtttatagagaa-tta 46783093  T
Q  216 tcttggcaac-aacactagggttgggattgttttgattcac 255  Q
    |||| ||||| ||||||||||||| ||| ||||||||||||    
T  46783094 tctttgcaacaaacactagggttgagatcgttttgattcac 46783134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 14996931 - 14997031
Alignment:
Q  155 aaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaa-caacactagggttgggattgttttgattc 253  Q
    |||||||||| ||||| || |||||||||||||| |||||||| |||||||| |||| ||||||||| ||  ||||||||||||||||||||||| ||||    
T  14996931 aaagtgtgtagaaaacagggtttagaagccaacaaacaaactagggtttataaagaa-ttctcttggtaataaacactagggttgggattgtttttattc 14997029  T
Q  254 ac 255  Q
    ||    
T  14997030 ac 14997031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 4145051 - 4144993
Alignment:
Q  96 tttgttccatattataagggttactttccactataaatataagtcttgtatcagatgat 154  Q
    |||||||| | |||| |||| | |||||||||||||||||||  |||||||||||||||    
T  4145051 tttgttcctttttatgagggatgctttccactataaatataaaccttgtatcagatgat 4144993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 20566946 - 20566860
Alignment:
Q  166 aaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcac 255  Q
    ||||| || ||||||||| |||| ||||||||||||| |||||   ||||||||| | |||| |||||||||| ||||| |||||||||||    
T  20566946 aaaacagggtttagaagcaaaca-acaaactaaggttaataga---tttctcttgacgacaaacactagggttaggattattttgattcac 20566860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 23 - 255
Target Start/End: Complemental strand, 27762408 - 27762177
Alignment:
Q  23 gtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttacttt 122  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  27762408 gtgccacgatgtaatcgtaacgtggcaagatggtacgctgaaggaaataacagaaacgtattttcagtgaagatttgttccatattttaagggttacttt 27762309  T
Q  123 ccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggc 222  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27762308 ccactataaatattagtcttgtatcagatgataaagtgtgta-gaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggc 27762210  T
Q  223 aacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||| ||||||||||||||||    
T  27762209 aacaacactagggttgagattgttttgattcac 27762177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 10949686 - 10949451
Alignment:
Q  19 taacgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggtta 118  Q
    ||||||| |||||||  |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10949686 taacgtggcacgatggcatcgtaacgtgccacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattttaagggtta 10949587  T
Q  119 ctttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctct 218  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  10949586 ctttccactataaatataagccttgtatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctct 10949487  T
Q  219 tggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||| ||||||||  ||||||||||||||||    
T  10949486 tggcaacaactctagggtt-cgattgttttgattcac 10949451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 22 - 254
Target Start/End: Original strand, 11079275 - 11079507
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactt 121  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||| ||| ||||| ||||||||||||    
T  11079275 cgtgccacgatggaatcgtaacgtggcacgatggtacactgaaggaaataacataaacgtattttcagtgaagatttattctatattttaagggttactt 11079374  T
Q  122 tccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttgg 221  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| | | || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  11079375 tccactataaatataagccttgtatcagatgataaagtgtgtatatagcagggtttagaagccaacatacaaactagggtttatagagaatttctcttgg 11079474  T
Q  222 caacaacactagggttgggattgttttgattca 254  Q
    |||||||||||||||||||||||||||||||||    
T  11079475 caacaacactagggttgggattgttttgattca 11079507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 47883306 - 47883073
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactt 121  Q
    |||||||| ||| ||| ||||| ||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  47883306 cgtgccacaatggaattgtaacgtggcacgatggtacgttgaagaaaataacataaacgtattttcagtgaagatttgttccatattttaagggttactt 47883207  T
Q  122 tccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttgg 221  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  47883206 tccactataaatataagccttgtatcagatgataaagtgtgtagaaaacaggatttagaagccaacatacaaactagggtttatagataatttctcttgg 47883107  T
Q  222 caacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||| ||||||||||||||||||||||    
T  47883106 caacaacactatggttgggattgttttgattcac 47883073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 255
Target Start/End: Original strand, 38002618 - 38002860
Alignment:
Q  14 catcataacgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataag 113  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||| |||||| ||||    
T  38002618 catcataacgcgccacgatgtaatcgaaacgtggcacgatggtacgctgaaggaaataacataaatgtattttcagtgaagatttgtttcatattttaag 38002717  T
Q  114 ggttactttccactataaatat-aagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaat 212  Q
    |||||||||||||||||||||| ||| ||||||||| |||||| | |||||| ||||| || |||||||| |||||||||||||| ||||||||||||||    
T  38002718 ggttactttccactataaatataaagccttgtatcaaatgatacactgtgtagaaaacaggatttagaagtcaacatacaaactagggtttatagagaat 38002817  T
Q  213 ttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  38002818 ttctcttggcaacaacactagggttgagattgttttgattcac 38002860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 255
Target Start/End: Complemental strand, 20031740 - 20031509
Alignment:
Q  21 acgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttact 120  Q
    ||||||||||||||||||||||| ||||| ||||||||| || |||| |||||||||||||||||||  ||||||||||||||||||| ||||| |||||    
T  20031740 acgtgccacgatgtaatcgtaacgtggcatgatggtacgatggaggatataacagaaacgtattttccgtgaagatttgttccatattttaaggattact 20031641  T
Q  121 ttccactataaatataagtcttgtatcagatgataaagtgtgta-taaaactggttttagaagccaacatacaaactaaggtttatagagaatttctctt 219  Q
    ||| ||||||||||||||||||||||||||||||||||||||||  ||||| || ||||||||||     |||||||| | |||||||||||||||||||    
T  20031640 ttcgactataaatataagtcttgtatcagatgataaagtgtgtagaaaaacagggtttagaagcc----gacaaactaggctttatagagaatttctctt 20031545  T
Q  220 ggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  20031544 ggcaacaacactagggttgggattgttttgattcac 20031509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 48390645 - 48390444
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactt 121  Q
    ||||| |||||| ||||||||| ||||||||||||||| || ||||||||| ||||||||||||||| |||||||||||| ||  || ||||||||||||    
T  48390645 cgtgctacgatggaatcgtaacgtggcacgatggtacgatggaggaaataatagaaacgtattttcagtgaagatttgtttcaacttttaagggttactt 48390546  T
Q  122 tccactataaatataagtcttgtatcagatgataaagtgtgta-taaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttg 220  Q
    ||||||||||||||||| || ||||||||||||||||||||||  ||||| || |||||||||| |||||||||||| ||||||||||||||||||||||    
T  48390545 tccactataaatataagcctcgtatcagatgataaagtgtgtagaaaaacagggtttagaagccgacatacaaactagggtttatagagaatttctcttg 48390446  T
Q  221 gc 222  Q
    ||    
T  48390445 gc 48390444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 35 - 255
Target Start/End: Original strand, 4535380 - 4535605
Alignment:
Q  35 aatcgtaacatggcacgatggtacgctgaagga-aataacagaaacgtattttcaatgaagatttgttcca----tattataagggttactttccactat 129  Q
    ||||||||| |||||||||| |||| |  |||| || |||| ||||||||||||| |||||||||||| ||    | ||  |||||||||||||||||||    
T  4535380 aatcgtaacgtggcacgatgatacgattgaggataaaaaca-aaacgtattttcagtgaagatttgtttcaattttgtttaaagggttactttccactat 4535478  T
Q  130 aaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaac 228  Q
    || |||||||||||||||||||||||||||||||| |||| | || ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  4535479 aattataagtcttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggttcatagagaatttctcttggcaacaac 4535578  T
Q  229 actagggttgggattgttttgattcac 255  Q
    |||||||||||| ||||||||||||||    
T  4535579 actagggttgggtttgttttgattcac 4535605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 5858397 - 5858537
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  5858397 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 5858496  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5858497 ctcttggcaacaacactagggttgggattgttttgattcac 5858537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 47878502 - 47878362
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  47878502 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 47878403  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  47878402 ctcttggcaacaacactagggttgggattgttttgattcac 47878362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 10613109 - 10612969
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaact-ggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  10613109 ttactttccactataaatataagccttgtatcatatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaattt 10613010  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10613009 ctcttggcaacaacactagggttgggattgttttgattcac 10612969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 10896856 - 10896996
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaact-ggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  10896856 ttactttccactataaagacaagtcttgtatcagatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaattt 10896955  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10896956 ctcttggcaacaacactagggttgggattgttttgattcac 10896996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 54193077 - 54193209
Alignment:
Q  117 tactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttc 215  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| |||||||||||||||||    
T  54193077 tactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttc 54193176  T
Q  216 tcttggcaacaacactagggttgggattgtttt 248  Q
    |||||||||||||||||||||||||||||||||    
T  54193177 tcttggcaacaacactagggttgggattgtttt 54193209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 116 - 248
Target Start/End: Original strand, 54188359 - 54188492
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||| |||| | || ||||||| ||||||||||||||||||||||||||||||||    
T  54188359 ttactttccactataaatataagccttgtatcaggtgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactaaggtttatagagaattt 54188458  T
Q  215 ctcttggcaacaacactagggttgggattgtttt 248  Q
    |||||||||||||||||||| |||||||||||||    
T  54188459 ctcttggcaacaacactaggtttgggattgtttt 54188492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 10595362 - 10595225
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttc 215  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||   | ||||||| ||||||||||||||| ||||||||||||||||     
T  10595362 ttactttccactataaatataagtcttgtatcagatgata--gtgtgtagaaaaaaaggtttagaaaccaacatacaaactagggtttatagagaattta 10595265  T
Q  216 tcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  10595264 tcttggcaacaacactagggtttggattgttttgattcac 10595225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 30 - 248
Target Start/End: Original strand, 13893228 - 13893445
Alignment:
Q  30 gatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactttccactat 129  Q
    |||| |||||||||| ||||| |||| |||||||||   | |||||||||||||||||| || |||||||||||| ||| |||||||||||||  |||||    
T  13893228 gatggaatcgtaacagggcacaatgggacgctgaagacgaaaacagaaacgtattttcagtgcagatttgttccaaattttaagggttacttt-tactat 13893326  T
Q  130 aaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aac 228  Q
    |||||||    |||||||| |||| |||||||||| |||||  | |||||||| ||||||| |||||| ||||||||||||| ||||||||||||| |||    
T  13893327 aaatatagacattgtatcaaatgaaaaagtgtgtagaaaacaaggtttagaagtcaacataaaaactagggtttatagagaa-ttctcttggcaacaaac 13893425  T
Q  229 actagggttgggattgtttt 248  Q
    ||||||||||||||||||||    
T  13893426 actagggttgggattgtttt 13893445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 29914284 - 29914144
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| | || ||||||||||||||| ||||||| |||||||||||||||    
T  29914284 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacagggtttagaagccaacattcaaactagggtttatagagaatt 29914186  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29914185 tctcttggcaacaacactagggttgggattgttttgattcac 29914144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 118 - 255
Target Start/End: Complemental strand, 22626312 - 22626175
Alignment:
Q  118 actttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttct 216  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||| ||||||||||    
T  22626312 actttccactataaataca-gccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatggagaatttct 22626214  T
Q  217 cttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  22626213 cttggcaacaactctagggttgggattgttttgattcac 22626175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 16462054 - 16462194
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||| ||||||||||||||| |||||| ||||||||    
T  16462054 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttacagagaatt 16462152  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||| ||||||||  |||||||||||||||||||||||||    
T  16462153 tctcttagcaacaactatagggttgggattgttttgattcac 16462194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 255
Target Start/End: Original strand, 6303153 - 6303301
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||||    
T  6303153 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttt 6303249  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  6303250 atagagaatctctcttggcaacaactctagggttgggattgttttgattcac 6303301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 10094403 - 10094265
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  10094403 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 10094307  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  10094306 tctcttggcaacaactctagggttgggattgttttgattcac 10094265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 10201283 - 10201145
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  10201283 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 10201187  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  10201186 tctcttggcaacaactctagggttgggattgttttgattcac 10201145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 10208329 - 10208191
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  10208329 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 10208233  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  10208232 tctcttggcaacaactctagggttgggattgttttgattcac 10208191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 76 - 255
Target Start/End: Original strand, 27544084 - 27544264
Alignment:
Q  76 aaacgtattttcaatgaagatttgttcca-tattataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa--c 170  Q
    ||||||||||||| | |||||||||| || | || |||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| ||||  |    
T  27544084 aaacgtattttcagt-aagatttgtttcagttttttaagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaaac 27544181  T
Q  171 tggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
      | ||||||  |||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  27544182 aaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaactctagggttgggattgttttgattcac 27544264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 3329794 - 3329884
Alignment:
Q  166 aaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaa-caacactagggttgggattgttttgattcac 255  Q
    ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  3329794 aaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaataaacactagggttgggaatgttttgattcac 3329884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 10100420 - 10100282
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||| |||||| | || |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  10100420 ttactttccacgataaat-tcagccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 10100324  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  10100323 tctcttggcaacaactctagggttgggattgttttgattcac 10100282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 254
Target Start/End: Complemental strand, 46967064 - 46966840
Alignment:
Q  25 gccacgatgtaatcgtaacatggcacgatggtacgctgaagga-aataacagaaacgtatttt-caatgaagatttgttccatattataagggttacttt 122  Q
    ||||||||| | ||||||| ||| ||||||| | ||||||||  || ||||||||| |||||| ||||| |||||||||||| ||| |||||||||||||    
T  46967064 gccacgatggagtcgtaacgtggtacgatggaatgctgaaggcgaaaaacagaaacatatttttcaatgcagatttgttccaaattttaagggttacttt 46966965  T
Q  123 ccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggc 222  Q
      |||||||||||||   ||||||||||||| |||  | ||     || || ||||||||||||||   ||| |||||||||||||| ||| ||||||||    
T  46966964 -tactataaatataaacattgtatcagatga-aaacagagt-----acagggtttagaagccaacaacaaaattaaggtttatagag-attcctcttggc 46966873  T
Q  223 aac-aacactagggttgggattgttttgattca 254  Q
    ||| ||||||||||||| |||||||| ||||||    
T  46966872 aacaaacactagggttgagattgtttcgattca 46966840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 7417953 - 7418037
Alignment:
Q  148 agatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacacta 232  Q
    ||||||| | ||||||| ||||| || |||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||    
T  7417953 agatgattatgtgtgtagaaaacggggtttagaagccaacataaaaactagggtttataaagaatttctcttggcaataacacta 7418037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 255
Target Start/End: Original strand, 16996737 - 16996866
Alignment:
Q  127 tataaatataagtcttgtatcagatgataaagtgtgtataaa-actggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaa- 224  Q
    |||||||||||  |||||||||||| | |||||||  | ||| ||  | |||||||||||||| |||||||| ||||||||||||| ||||||||| ||     
T  16996737 tataaatataaaccttgtatcagataaaaaagtgttaagaaacacaaggtttagaagccaacaaacaaactagggtttatagagaa-ttctcttggtaat 16996835  T
Q  225 caacactagggttgggattgttttgattcac 255  Q
     |||||||||||||| | |||||||||||||    
T  16996836 aaacactagggttggaaatgttttgattcac 16996866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 7768563 - 7768614
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaa 227  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||||||||    
T  7768563 tttagaagccaacatcaaaactaaggtttgtagagaa-ttctcttggcaacaa 7768614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 15823876 - 15823801
Alignment:
Q  179 gaagccaacatacaaactaaggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcac 255  Q
    |||||||||| |||||||| |||||||||||  |||||||| | ||||| |||||||| || ||||||||||||||||    
T  15823876 gaagccaaca-acaaactagggtttatagagt-tttctctttgaaacaaacactagggctgagattgttttgattcac 15823801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 20 - 255
Target Start/End: Complemental strand, 44144292 - 44144057
Alignment:
Q  20 aacgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttac 119  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  44144292 aacgtgccacgatgtaatcgtaacgtggcacgatggtacgctcaaggaaataacataaacgtattttcagtgaagatttgttccatattttaagggttac 44144193  T
Q  120 tttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctctt 219  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||  | ||||||||||||||||||||||| |||||||||||||||| ||||    
T  44144192 tttccactataaatataagtcttgtatcagacgataaagtgtgtagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttttctt 44144093  T
Q  220 ggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||  ||||||||||||||||    
T  44144092 ggcaacaacactagggttatgattgttttgattcac 44144057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 42006422 - 42006654
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactt 121  Q
    |||| ||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  42006422 cgtggcacgatggaatcgtaacgtggcacgatggtacgttgaaggaaataacataaacgtattttcagtgaagatttgttccatattttaagggttactt 42006521  T
Q  122 tccactataaatataagtcttgtatcagatgataaagtgtgta-taaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttg 220  Q
    |  |||||||||||||  | ||||| |||||| ||| ||||||  ||||| || |||||||||||||| |||||||| |||||||||| |||||||||||    
T  42006522 t-tactataaatataaaccgtgtataagatga-aaaatgtgtagaaaaacagggtttagaagccaacaaacaaactatggtttatagaaaatttctcttg 42006619  T
Q  221 gcaacaacactagggttgggattgttttgattcac 255  Q
    |||| ||||||||||||||||||||||||||||||    
T  42006620 gcaagaacactagggttgggattgttttgattcac 42006654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 25409982 - 25410121
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttc 215  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  25409982 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttc 25410081  T
Q  216 tcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25410082 tcttggcaacaacactagggttgggattgttttgattcac 25410121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 34547194 - 34547054
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  34547194 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 34547095  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34547094 ctcttggcaacaacactagggttgggattgttttgattcac 34547054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 25351205 - 25351344
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttc 215  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  25351205 ttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttc 25351304  T
Q  216 tcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  25351305 tcttggcaacaacactagggttgagattgttttgattcac 25351344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 25356899 - 25357038
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttc 215  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  25356899 ttactttccactataaatataagccttatatcagatgataaagtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttc 25356998  T
Q  216 tcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  25356999 tcttggcaacaacactagggttgagattgttttgattcac 25357038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 7464849 - 7464709
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | || |||| |||||||||||||||||| ||||||||||||||||    
T  7464849 ttactttccactataaatataagtcttgtataagatgataaagtgtgtagaaaaacagggtttaaaagccaacatacaaactagggtttatagagaattt 7464750  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  7464749 ctcttggcaacaacactagggtttggattgttttgattcac 7464709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 119 - 255
Target Start/End: Complemental strand, 44016989 - 44016852
Alignment:
Q  119 ctttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctct 218  Q
    |||||||||||||||||||  ||||||||||||||| | ||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  44016989 ctttccactataaatataaaccttgtatcagatgattatgtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctct 44016890  T
Q  219 tggcaac-aacactagggttgggattgttttgattcac 255  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  44016889 tggcaacaaacactagggttgggattgttttgattcac 44016852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 30246821 - 30246961
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| | |||| | || ||||||||||||||   |||||| ||||||||||||||||    
T  30246821 ttactttccactataaatataagccttgtatcagatgataaagtgtggagaaaaacagggtttagaagccaacaacaaaactagggtttatagagaattt 30246920  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  30246921 ctcttggcaacaacactacggttgggattgttttgattcac 30246961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 76 - 255
Target Start/End: Complemental strand, 44512898 - 44512716
Alignment:
Q  76 aaacgtattttcaatgaagatttgttcca-tattataagggtt-actttccactataaatataagtcttgtatcagatgataaagtgtgta-taaaactg 172  Q
    ||||||||||||| | |||||||||| || | || |||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||  ||||| |    
T  44512898 aaacgtattttcagtaaagatttgtttcagttttttaagggtttactttccactataaatataagccttgtataagatgataaagtgtgtagaaaaacag 44512799  T
Q  173 gttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacacta-gggttgggattgttttgattcac 255  Q
    | ||||||| ||||||||||||||| |||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  44512798 ggtttagaaaccaacatacaaactagggtttatagagaattt-tctttgcaacaacactaggggttgggattgttttgattcac 44512716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 119 - 251
Target Start/End: Complemental strand, 44011078 - 44010945
Alignment:
Q  119 ctttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctct 218  Q
    |||||||||||||||||||  ||||||||||||||| | ||||||| ||||| || ||||||||||||||||||||||| |||||||||||||||| |||    
T  44011078 ctttccactataaatataaaccttgtatcagatgattatgtgtgtagaaaacagggtttagaagccaacatacaaactatggtttatagagaatttttct 44010979  T
Q  219 tggcaac-aacactagggttgggattgttttgat 251  Q
    ||||||| ||||||||||||||||||||||||||    
T  44010978 tggcaacaaacactagggttgggattgttttgat 44010945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 8378829 - 8378695
Alignment:
Q  122 tccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctctt 219  Q
    ||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||| ||||||||||||||| |||||||||||||||||||||    
T  8378829 tccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatttctctt 8378731  T
Q  220 ggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||||||||||||||||||||||||||    
T  8378730 ggcaacaactctagggttgggattgttttgattcac 8378695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 7069633 - 7069771
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  7069633 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 7069729  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  7069730 tctcttggcaacaactctagggttgggattgttttgattcac 7069771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 7074640 - 7074778
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  7074640 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 7074736  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  7074737 tctcttggcaacaactctagggttgggattgttttgattcac 7074778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 25405246 - 25405384
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  25405246 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 25405342  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  25405343 tctcttggcaacaactctagggttgggattgttttgattcac 25405384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 1099700 - 1099625
Alignment:
Q  180 aagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  1099700 aagccaacatacaaactagggtttatagagaatttctcttggcaacaacactagggttgaaattgttttgattcac 1099625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 175 - 255
Target Start/End: Original strand, 2120809 - 2120890
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgtt-ttgattcac 255  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  2120809 tttagaagccaacatacaaactagggtttatagagattttctcttggcaacaactctagggttgggattgttgttgattcac 2120890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 21369536 - 21369633
Alignment:
Q  159 tgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcac 255  Q
    |||||| ||||| || ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||    
T  21369536 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaaattctcttggcaacaaacattagggttgagattgttttgattcac 21369633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 248
Target Start/End: Complemental strand, 6067522 - 6067399
Alignment:
Q  125 actataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaa 224  Q
    ||||||||||||| || |||||||||||| || ||||| | |||||  | |||||||||||||| |||||||| ||||||||||||| ||||||||| ||    
T  6067522 actataaatataaatcctgtatcagatgaaaacgtgtgaagaaaacatggtttagaagccaacaaacaaactagggtttatagagaa-ttctcttggtaa 6067424  T
Q  225 c-aacactagggttgggattgtttt 248  Q
    | |||||||||||||||||||||||    
T  6067423 caaacactagggttgggattgtttt 6067399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 255
Target Start/End: Complemental strand, 15541301 - 15541186
Alignment:
Q  140 cttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggtt 237  Q
    |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  15541301 cttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctctcttggcaacaactctagggtt 15541204  T
Q  238 gggattgttttgattcac 255  Q
    ||||||||||||||||||    
T  15541203 gggattgttttgattcac 15541186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 255
Target Start/End: Complemental strand, 3320389 - 3320241
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| |||||| |||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||   ||||| |||||||| |||||    
T  3320389 ttataagggtttactttctactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagat--caacaaacaaactagggttt 3320293  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  3320292 atagagaatctctattggcaacaactctagggttgggattgttttgattcac 3320241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 255
Target Start/End: Complemental strand, 3325137 - 3324989
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| |||||| |||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||   ||||| |||||||| |||||    
T  3325137 ttataagggtttactttctactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagat--caacaaacaaactagggttt 3325041  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  3325040 atagagaatctctattggcaacaactctagggttgggattgttttgattcac 3324989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 26210562 - 26210633
Alignment:
Q  172 ggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattg 244  Q
    |||||||||| ||||| |  |||||| ||||| ||||||||| |||||||||||||||||||||||| |||||    
T  26210562 ggttttagaatccaacctcaaaactagggtttgtagagaatt-ctcttggcaacaacactagggttgtgattg 26210633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 1099761 - 1099725
Alignment:
Q  219 tggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||| ||||||||||||||||    
T  1099761 tggcaacaacactagggttgagattgttttgattcac 1099725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 45366451 - 45366526
Alignment:
Q  71 aacagaaacgtatttt-caatgaagatttgttccatattataagggttactttccactataaatataagtcttgtat 146  Q
    |||||||||||||||| || || |||||||||||| ||| |||||||||||||  |||||||||||||  |||||||    
T  45366451 aacagaaacgtatttttcagtgcagatttgttccaaattttaagggttacttt-tactataaatataaaccttgtat 45366526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 6048894 - 6048963
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattg 244  Q
    |||||||||||||||  |||||| ||||| || |||| ||||||||||||| ||||||||| |||||||||    
T  6048894 tttagaagccaacatcaaaactagggtttgtaaagaa-ttctcttggcaacaaacactaggtttgggattg 6048963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 11081531 - 11081600
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattg 244  Q
    ||||||||||||||   |||||| ||||| ||||||| ||||||||||||| ||||||||||||| |||||    
T  11081531 tttagaagccaacaacaaaactagggtttgtagagaa-ttctcttggcaacaaacactagggttgagattg 11081600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 22392328 - 22392457
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaagg-aaataacagaaacgta-ttttcaatgaagatttgttccatattataagggttac 119  Q
    ||||||||||||  |||| ||| ||| |||||||| ||||| ||| ||| |||||||| ||| |||||| || |||||||||||| ||| |||| | |||    
T  22392328 cgtgccacgatgggatcgcaacgtggtacgatggtgcgctggaggcaaaaaacagaaatgtatttttcagtgcagatttgttccaaattgtaagcgatac 22392427  T
Q  120 tttccactataaatataagtcttgtatcaga 150  Q
    |||  ||||||||||||   |||||||||||    
T  22392428 ttt-tactataaatatagaccttgtatcaga 22392457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 26804452 - 26804543
Alignment:
Q  45 tggcacgatggtacgctga-aggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactttccactataaatata 136  Q
    |||||||||||| |||||  || ||||||||||||||||||||   || |||||||||||| ||| |||| | ||||||  ||||||||||||    
T  26804452 tggcacgatggtgcgctggcagcaaataacagaaacgtattttgggtgcagatttgttccaaattttaagcgatacttt-tactataaatata 26804543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 180; Significance: 3e-97; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 20 - 255
Target Start/End: Original strand, 4569851 - 4570085
Alignment:
Q  20 aacgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttac 119  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  4569851 aacgtgccacgatgtaatcgtaacattgcacgatggtatgctgaagaaaataacagaaacgtattttcagtgaagatttgttccatattttaagggttac 4569950  T
Q  120 tttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctctt 219  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||||| |||||||||||||||||||||    
T  4569951 tttc-actataaatataagccttgtatcagatgataaagtgtgtagaaaacagagtttagaagccaacatacaaactagggtttatagagaatttctctt 4570049  T
Q  220 ggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4570050 ggcaacatcactagggttgggattgttttgattcac 4570085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 25699507 - 25699740
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactt 121  Q
    |||| ||||||| ||| ||||| |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  25699507 cgtgacacgatggaattgtaacgtggcacgatggtacgctgaaggaaataacataaacgtattttctgtgaagatttgttccatattttaagggttactt 25699606  T
Q  122 tccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttgg 221  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| || |||| |||||||||||||||||| |||||||||||||||||||||||    
T  25699607 tccactataaatataagtcttgtatcatatgataaagtgtgtagaaaacagggtttaaaagccaacatacaaactagggtttatagagaatttctcttgg 25699706  T
Q  222 caacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||||||||    
T  25699707 caacaacactagggttgggattgttttgattcac 25699740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 4556486 - 4556250
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgct-gaaggaaataacagaaacgtattttcaatgaagatttgttcca-tattataaggg-tta 118  Q
    |||||||||||| ||||| ||| |||||||||||| || | ||||  || || | ||||||||||||| |||||||||||| || | || |||||| |||    
T  4556486 cgtgccacgatgaaatcgcaacgtggcacgatggtgcgattgaagataaaaata-aaacgtattttcagtgaagatttgtttcagttttttaaggggtta 4556388  T
Q  119 ctttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctc 217  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||| ||||||||| |||||||||||||||||||    
T  4556387 ctttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacttacaaactagggtttatagagaatttctc 4556288  T
Q  218 ttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||| |||||||    
T  4556287 ttggcaacaacactagggttgggattgtttcgattcac 4556250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 18586817 - 18586957
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaact-ggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  18586817 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaattt 18586916  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18586917 ctcttggcaacaacactagggttgggattgttttgattcac 18586957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 16489201 - 16489340
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttc 215  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||| |||||||||||||||||    
T  16489201 ttactttccactatgaatataagccttgtatcagatgataaagtgtgtagaaaacagggtttagaaaccaacatacaaactagggtttatagagaatttc 16489300  T
Q  216 tcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  16489301 tcttggcaacaacactaaggttgagattgttttgattcac 16489340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 76 - 255
Target Start/End: Original strand, 31300233 - 31300415
Alignment:
Q  76 aaacgtattttcaatgaagatttgttcca-tattataaggg-ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctg 172  Q
    ||||||||||||| |||||||||||| || | || |||||| |||||||||||||||||||||||  |||||||| ||||||||||||||| |||| | |    
T  31300233 aaacgtattttcagtgaagatttgtttcagttttttaaggggttactttccactataaatataagctttgtatcatatgataaagtgtgtagaaaaacag 31300332  T
Q  173 gttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    | ||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31300333 ggtttagaaaccaacattcaaactagggtttatagagaatttctctttgcaacaacactagggttgggattgttttgattcac 31300415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 76 - 255
Target Start/End: Original strand, 4884682 - 4884865
Alignment:
Q  76 aaacgtattttcaatgaagatttgttccatattat---aagggttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ct 171  Q
    ||||||||||||| |||||||||||| ||  || |   ||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||| |     
T  4884682 aaacgtattttcagtgaagatttgtttcaatttttttaaagggttactttccattataaatataagccttgtatcagatgataaagtgtgtagaaaaaca 4884781  T
Q  172 ggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    || |||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  4884782 gggtttagaagccaacatacaaattagggtttatagagaatttctctttgcaacaacactgggggtgggattgttttgattcac 4884865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 15830992 - 15831132
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| |||||||||| |||||    
T  15830992 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagaaaattt 15831091  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  15831092 ttcttggcaacaacactagggttgggattgttttgattcac 15831132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 255
Target Start/End: Original strand, 16638636 - 16638818
Alignment:
Q  73 cagaaacgtattttcaatgaagatttgttccatattataagggttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactg 172  Q
    |||||||||||||||| || || ||||||||| ||| ||||||||||| |   ||| ||||||||  |||||||||||||| |||||||||| ||||| |    
T  16638636 cagaaacgtattttcagtgcaggtttgttccaaattttaagggttactcttt-ctaaaaatataaaccttgtatcagatgaaaaagtgtgtagaaaacag 16638734  T
Q  173 gttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcac 255  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  16638735 ggtttagaagccaacatacaaactagggtttatagagaatttctctttgcaacaaacactagggttgggattgttttgattcac 16638818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 16689368 - 16689131
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtatttt-caatgaagatttgttcca-tattataaggg-tta 118  Q
    |||||||||||| ||||| ||| |||||||||||| || |  |||| | || | ||||||||||| || |||||||||||| || | || |||||| |||    
T  16689368 cgtgccacgatgaaatcgcaacgtggcacgatggtgcgattgaggataaaataaaaacgtatttttcagtgaagatttgtttcaattttttaaggggtta 16689269  T
Q  119 ctttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctc 217  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||| ||||||| |||||||||| ||||||||    
T  16689268 ctttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacattcaaactagggtttatagataatttctc 16689169  T
Q  218 ttggcaacaacactagggttgggattgttttgattcac 255  Q
    || |||||||| ||||| |||| |||||||||||||||    
T  16689168 tttgcaacaactctaggtttggaattgttttgattcac 16689131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 8529119 - 8529258
Alignment:
Q  117 tactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaact-ggttttagaagccaacatacaaactaaggtttatagagaatttc 215  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||| |||| | || ||||||| ||||||||||||||| |||||||||||||||||    
T  8529119 tactttccactataaatataagctttgtatcagatcataaagtgtgtagaaaaatagggtttagaaaccaacatacaaactagggtttatagagaatttc 8529218  T
Q  216 tcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  8529219 tcttggcaacaccactagggttgggattgttttgattcac 8529258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 15316809 - 15316946
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  15316809 ttactttccactataaatataagccttgtatcagatggtaaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 15316908  T
Q  215 ctcttggcaacaacactagggttgggattgttttgatt 252  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  15316909 ctcttggcagcaacactagggttcggattgttttgatt 15316946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 7050662 - 7050510
Alignment:
Q  14 catcataacgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaaga-tttgttccatattataa 112  Q
    |||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | |||||| ||||||||||||| |||    
T  7050662 catcgtaacgcgccgcgatgtaatcgtaacgtggcacgatggtacgctgaaggaaataacaaaaacgtatttttagtgaagattttgttccatattttaa 7050563  T
Q  113 gggttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa 169  Q
    |||||||||||||||||||||||||| ||||||    ||||||||||||||| ||||    
T  7050562 gggttactttccactataaatataagccttgta----atgataaagtgtgtagaaaa 7050510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 96 - 255
Target Start/End: Complemental strand, 13072330 - 13072172
Alignment:
Q  96 tttgttccatattataagggttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaac 195  Q
    |||||||| | |||| |||| | |||||||||||| ||||||  |||||||||||||| | | |||||| |||||  | |||||||||||||||||||||    
T  13072330 tttgttcctttttatgagggatgctttccactatagatataaaccttgtatcagatga-atattgtgtagaaaacaaggtttagaagccaacatacaaac 13072232  T
Q  196 taaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13072231 tagggtttatagagaatttctcttggcaacatcactagggttgggattgttttgattcac 13072172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 15312173 - 15312307
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||| |       ||||||||||| |||| |  | ||||||| ||||||||||||||| ||||||||||||||||    
T  15312173 ttactttccactataaatataagccttgtttg------taaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaattt 15312266  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15312267 ctcttggcaacaacactagggttgggattgttttgattcac 15312307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 47566387 - 47566484
Alignment:
Q  159 tgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcac 255  Q
    |||||| ||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  47566387 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttatcttggcaacaaacactagggttgagattgttttgattcac 47566484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 175 - 255
Target Start/End: Original strand, 36769389 - 36769470
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36769389 tttagaagccaacatacaaactagggtttgaagagaatttctcttggcaacaaacactagggttgggattgttttgattcac 36769470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 11853402 - 11853540
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| | |||||| ||||||||||||||     
T  11853402 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaataaactagggtttatagagaatc 11853498  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||| ||||||||||||||||    
T  11853499 tctcttggcaacaactctagggttgagattgttttgattcac 11853540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 255
Target Start/End: Original strand, 36771306 - 36771387
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  36771306 tttagaagccaacatacaaactagggtttgaagagaatttctcttggcaacaaacactagggttgagattgttttgattcac 36771387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 4558205 - 4558287
Alignment:
Q  159 tgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttggg 240  Q
    |||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  4558205 tgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaaacactagggctggg 4558287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 25614191 - 25614111
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  25614191 tttagaagccaacatacaa-ctatggtttatagagaatttctcttggtaacaaacactagggttgagattgttttgattcac 25614111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 55822184 - 55822256
Alignment:
Q  183 ccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||| ||||| || |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  55822184 ccaacaaacaaattagggtttatagagaatctctcttggcaacaactctagggttgggattgttttgattcac 55822256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 7050511 - 7050448
Alignment:
Q  192 aaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  7050511 aaactagggtttatagagaatttctcttggcaacaacactaaggttgtgattgttttgattcac 7050448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 26557664 - 26557729
Alignment:
Q  190 acaaactaaggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcac 255  Q
    |||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  26557664 acaaactagggtttatagaga-tttctcttggcaacaaacactagggttgggattgttttgattcac 26557729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 32274172 - 32274093
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcac 255  Q
    |||||||||||||| ||||||||  ||||||||||| ||||| |||||||||| |||||| |||| ||||||||||||||||    
T  32274172 tttagaagccaaca-acaaactagagtttatagaga-tttctattggcaacaaacactagagttgagattgttttgattcac 32274093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 4874750 - 4874670
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcac 255  Q
    |||||||||||||| |||||||| | |||| |||||| |||||| | |||| |||||||| |||||| ||||||||||||||    
T  4874750 tttagaagccaacaaacaaactaggatttaaagagaa-ttctctagacaacaaacactagagttgggtttgttttgattcac 4874670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 4558133 - 4558165
Alignment:
Q  119 ctttccactataaatataagtcttgtatcagat 151  Q
    |||||||||||||||||||||||||||||||||    
T  4558133 ctttccactataaatataagtcttgtatcagat 4558165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 9148197 - 9148279
Alignment:
Q  67 aaataacagaaacgtattttcaatgaagatttgttccatattataagggttactttccactataaatataagtcttgtatcaga 150  Q
    ||||||||||||||||||||   || |||||||||||| ||| |||| | ||||||  |||||||||||| | |||||||||||    
T  9148197 aaataacagaaacgtattttgggtgcagatttgttccaaattttaagcgatacttt-tactataaatataggccttgtatcaga 9148279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 3982434 - 3982369
Alignment:
Q  190 acaaactaaggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcac 255  Q
    |||||||| |||| |||| || |||||||||||||||| ||||||||||| ||||||||| ||||||    
T  3982434 acaaactagggttcatagtga-tttctcttggcaacaaacactagggttgagattgtttttattcac 3982369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 36769301 - 36769335
Alignment:
Q  119 ctttccactataaatataagtcttgtatcagatga 153  Q
    |||||||||||||||||||| ||||||||||||||    
T  36769301 ctttccactataaatataagccttgtatcagatga 36769335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 52043648 - 52043579
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattg 244  Q
    |||||||||||||||  |||||||||||| |||||  ||||||||| || | |||||||||||||||||||    
T  52043648 tttagaagccaacatcaaaactaaggtttgtagag-ttttctcttgtcagcaaacactagggttgggattg 52043579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 13467891 - 13467654
Alignment:
Q  19 taacgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggtta 118  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||    
T  13467891 taacgtgccatgatgtaatcgtaacgtggcacgatggtacgctgaaggaaataacataaacgtattttcagtgaagatttgttctatattttaagggtta 13467792  T
Q  119 ctttccactataaatataagtcttgtatcagatgataaagtgtgta-taaaactggttttagaagccaacatacaaactaaggtttatagagaatttctc 217  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||  ||||| || ||||||||||||||||||||||| |||||||||||||||| ||    
T  13467791 ctttccactataaatataagccttgtatcaaatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttatc 13467692  T
Q  218 ttggcaacaacactagggttgggattgttttgattcac 255  Q
    || |||||||||||||||||||||||||||||||||||    
T  13467691 tttgcaacaacactagggttgggattgttttgattcac 13467654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 26642934 - 26643167
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactt 121  Q
    ||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||||||||    
T  26642934 cgtgcaacgatggaatcgtaacgtggcacgatggtacgttgaaggaaataacagaaacgtattttcagggaagatttattccatattttaagggttactt 26643033  T
Q  122 tccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttgg 221  Q
    |||||||||||||||||||||||||||||||| |||  |  || |||||  | ||||||||||||||||||||||| ||||||||||||||||||||||     
T  26643034 tccactataaatataagtcttgtatcagatgagaaacagaatagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttgc 26643133  T
Q  222 caacaacactagggttgggattgttttgattcac 255  Q
    | ||||||||||||||||||||||||||||||||    
T  26643134 ccacaacactagggttgggattgttttgattcac 26643167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 26748900 - 26749133
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactt 121  Q
    ||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||||||||    
T  26748900 cgtgcaacgatggaatcgtaacgtggcacgatggtacgttgaaggaaataacagaaacgtattttcagggaagatttattccatattttaagggttactt 26748999  T
Q  122 tccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttgg 221  Q
    |||||||||||||||||||||||||||||||| |||  |  || |||||  | ||||||||||||||||||||||| ||||||||||||||||||||||     
T  26749000 tccactataaatataagtcttgtatcagatgagaaacagaatagaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctcttgc 26749099  T
Q  222 caacaacactagggttgggattgttttgattcac 255  Q
    | ||||||||||||||||||||||||||||||||    
T  26749100 ccacaacactagggttgggattgttttgattcac 26749133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 33215583 - 33215818
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataa--gggttac 119  Q
    |||||||||||| ||||| ||| ||||||||||||||  |  |||| | |||||||||||||||||| |||||||||||||||  || |||  |||||||    
T  33215583 cgtgccacgatgaaatcgcaacgtggcacgatggtaccattgaggataaaacagaaacgtattttcagtgaagatttgttccaatttttaaaggggttac 33215682  T
Q  120 tttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctct 218  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||| |||| | |  ||||||||||||||||||||||| ||||||||||||||||||||    
T  33215683 tttc-actataaatataagccttgtgtcagatgataaagtgtgtagaaaaacagagtttagaagccaacatacaaactagggtttatagagaatttctct 33215781  T
Q  219 tggcaacaacactagggttgggattgttttgattcac 255  Q
    | |||||||||||||||||| ||||||||||||||||    
T  33215782 ttgcaacaacactagggttgtgattgttttgattcac 33215818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 22352186 - 22352043
Alignment:
Q  113 gggttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaa 211  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| | || ||||||||||||||||||||||| |||||||||||||    
T  22352186 gggttactttccactataaatataaaccttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaa 22352087  T
Q  212 tttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  22352086 tttctcttggcaacaacactagggttgggattgttttgaatcac 22352043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 76 - 255
Target Start/End: Complemental strand, 17695223 - 17695042
Alignment:
Q  76 aaacgtattttcaatgaagatttgttcca-tattataagggtt-actttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctg 172  Q
    ||||||||||||||| | |||||||| || | || |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |    
T  17695223 aaacgtattttcaatta-gatttgtttcagttttttaagggtttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacag 17695125  T
Q  173 gttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17695124 ggtttagaaaccaacatacaaactagggtttatagagaatttctcttggcaacaaaactagggttgggattgttttgattcac 17695042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 25466230 - 25466090
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  25466230 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 25466131  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  25466130 ctcttggcaacaacactaaggttgagattgttttgattcac 25466090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 113 - 254
Target Start/End: Complemental strand, 22343135 - 22342993
Alignment:
Q  113 gggttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaa 211  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||||||| |||| | || ||||||||||||||||||||||| |||||||||||||    
T  22343135 gggttactttcccctataaatataagccttgtatcatatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaa 22343036  T
Q  212 tttctcttggcaacaacactagggttgggattgttttgattca 254  Q
    | ||||||||||||||||||||||||| |||||||||||||||    
T  22343035 tctctcttggcaacaacactagggttgagattgttttgattca 22342993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 25941496 - 25941635
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgta-taaaactggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||  | ||||||| ||||||| |||||| ||| |||||||||||||    
T  25941496 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacatggtttagaaaccaacattcaaact-agggttatagagaattt 25941594  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  25941595 ctcttggtaacaactctagggttgggattgttttgattcac 25941635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 120 - 255
Target Start/End: Complemental strand, 5166141 - 5166007
Alignment:
Q  120 tttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctctt 219  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| ||||| || ||||||||||||||||||| ||| |||||||||||||||||||      
T  5166141 tttccactataaatataagtcttgtatcagatgattatgtgtgtagaaaacagggtttagaagccaacatacaagctagggtttatagagaatttctcaa 5166042  T
Q  220 ggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||| || ||||||||||||| |||||||||||||    
T  5166041 ggcaagaatactagggttggga-tgttttgattcac 5166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 140 - 255
Target Start/End: Complemental strand, 3577821 - 3577705
Alignment:
Q  140 cttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttg 238  Q
    ||||||||||||||||||||||||| |||| | || |||| || ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  3577821 cttgtatcagatgataaagtgtgtagaaaaacagggtttaaaaaccaacatacaaactagggtttatagagaatttctctttgcaacaacactagggttg 3577722  T
Q  239 ggattgttttgattcac 255  Q
    |||||||||||||||||    
T  3577721 ggattgttttgattcac 3577705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 255
Target Start/End: Original strand, 13878570 - 13878718
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||||    
T  13878570 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttt 13878666  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  13878667 atagagaatctctcttggcaacaactctagggttgggattgttttgattcac 13878718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 17035974 - 17036046
Alignment:
Q  183 ccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17035974 ccaacatacaaactagggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 17036046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 13883328 - 13883466
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  13883328 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 13883424  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  13883425 tctcttggcaacaactctagggttgggattgttttgattcac 13883466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 31249043 - 31248905
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  31249043 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 31248947  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  31248946 tctcttggcaacaactctagggttgggattgttttgattcac 31248905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 35201655 - 35201517
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  35201655 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 35201559  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  35201558 tctcttggcaacaactctagggttgggattgttttgattcac 35201517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 19702134 - 19702053
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19702134 tttagaagccaacatacaaactagcgtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcac 19702053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 255
Target Start/End: Complemental strand, 26887563 - 26887415
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| | ||||| |||| |  | ||||||  |||||| |||||||| |||||    
T  26887563 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagcgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttt 26887467  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  26887466 atagagaatctctcttggcaacaactctagggttgggattgttttgattcac 26887415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 16785772 - 16785910
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||| ||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  16785772 ttactttccactataaataca-gccttgtagcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 16785868  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  16785869 tctcttggcaacaactctagggttgggattgttttgattcac 16785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 12166394 - 12166337
Alignment:
Q  199 ggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12166394 ggtttatagagaatttctcttggcaacaaacactagggttgggattgttttgattcac 12166337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 24542944 - 24542865
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcac 255  Q
    ||||||||||||||  ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  24542944 tttagaagccaacac-caaactatggtttatagaga-tttctcttggcaacaaacactagggttgggattgttttgattcac 24542865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 8995383 - 8995488
Alignment:
Q  45 tggcacgatggtacgctga-aggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactttccactataaatataagtcttg 143  Q
    |||||||||||| |||||| || ||||||||||||||||||||   || |||||||||||| ||| |||| | ||||||  ||||||||||||  |||||    
T  8995383 tggcacgatggtgcgctgacagcaaataacagaaacgtattttgggtgcagatttgttccaaattttaagcgatacttt-tactataaatatagatcttg 8995481  T
Q  144 tatcaga 150  Q
    |||||||    
T  8995482 tatcaga 8995488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 9019830 - 9019935
Alignment:
Q  45 tggcacgatggtacgctga-aggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactttccactataaatataagtcttg 143  Q
    |||||||||||| |||||| || ||||||||||||||||||||   || |||||||||||| ||| |||| | ||||||  ||||||||||||  |||||    
T  9019830 tggcacgatggtgcgctgacagcaaataacagaaacgtattttgggtgcagatttgttccaaattttaagcgatacttt-tactataaatatagatcttg 9019928  T
Q  144 tatcaga 150  Q
    |||||||    
T  9019929 tatcaga 9019935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 6843178 - 6843246
Alignment:
Q  176 ttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattg 244  Q
    |||||||||||||   |||||| ||||| |||||||||| |||||||||| |||||||||||| ||||||    
T  6843178 ttagaagccaacaataaaactatggtttgtagagaattt-tcttggcaacaaacactagggttaggattg 6843246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 23179986 - 23179752
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactt 121  Q
    |||| ||||||  ||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||| |||| | |||||    
T  23179986 cgtgtcacgattgaatcgtaacgtggcacgatggtacgctgaaggaaataattgaaacgtattttcagtgaagatttgttccatattttaagagatactt 23179887  T
Q  122 tccactataaatataagtcttgtatcagatgataaagtgtgta-taaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttg 220  Q
    |||||||||||||||||||||||||||||||| ||   | |||  ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  23179886 tccactataaatataagtcttgtatcagatgaaaagaagagtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctcttg 23179787  T
Q  221 gcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||    
T  23179786 gcaacaacactagggttgggattgttttgattcac 23179752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 20 - 252
Target Start/End: Original strand, 3276098 - 3276332
Alignment:
Q  20 aacgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataag-ggtta 118  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||||||||  |||||||||||||||  || |||| |||||    
T  3276098 aacgtgccacgatgcaatcgtaacgtggcacgatggtacgttgaaggaaataatagaaacgtattttctgtgaagatttgttccaatttttaagaggtta 3276197  T
Q  119 ctttccactataaatataagtcttgtatcagatgataaagtgtgta-taaaactggttttagaagccaacatacaaactaaggtttatagagaatttctc 217  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||  ||||| || |||||||||||||| | |||||| |||||||||||||||| ||    
T  3276198 cttttcactataaatataagccttgtattagatgataaagtgtgtagaaaaacagggtttagaagccaacacaaaaactagggtttatagagaatttttc 3276297  T
Q  218 ttggcaacaacactagggttgggattgttttgatt 252  Q
    || |||||||| | |||||||||||||||||||||    
T  3276298 tttgcaacaactccagggttgggattgttttgatt 3276332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 76 - 255
Target Start/End: Original strand, 21033679 - 21033861
Alignment:
Q  76 aaacgtattttcaatgaagatttgttcca-tattataaggg-ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctg 172  Q
    ||||||||||||| |||||||||||| || | || |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |    
T  21033679 aaacgtattttcagtgaagatttgtttcagttttttaaggggttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacag 21033778  T
Q  173 gttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    | ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  21033779 ggtttagaagccaacatacaaactagggtttatagataatttctcttggcaacaacactaggcttgggattgttttgattcac 21033861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 590645 - 590785
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    |||||||||||||||||| |||| ||||||||||||||||||| ||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  590645 ttactttccactataaatctaagccttgtatcagatgataaagagtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 590744  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  590745 ctcttggcaacaacacttgggttgggattgttttgattcac 590785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 76 - 255
Target Start/End: Complemental strand, 9021479 - 9021298
Alignment:
Q  76 aaacgtattttcaatgaagatttgttcca-tattataagggtt-actttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctg 172  Q
    ||||||||||||| |  ||||||||| || | || |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| |||| | |    
T  9021479 aaacgtattttcagtttagatttgtttcagttttttaagggtttactttc-actataaatataagccttgtatcagatgataaagtgtgtagaaaaacag 9021381  T
Q  173 gttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    | ||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  9021380 ggtttagaaaccaacatacaaactagggtttatagagaatttctctttgcaacaacactagggttcggattgttttgattcac 9021298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 29555116 - 29554976
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||| |||||||||||||||  |||||||||||||||||||||||| |||| | || ||||||| ||| ||||||||||| ||||| ||||||||||    
T  29555116 ttacttttcactataaatataagcgttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccatcatacaaactagggtttttagagaattt 29555017  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29555016 ctcttggcaacaacactagggttgggattgttttgattcac 29554976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 2267346 - 2267214
Alignment:
Q  124 cactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggca 223  Q
    ||||||||||||||  ||||||||||||||  | ||||||| |||||  | ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2267346 cactataaatataaaccttgtatcagatgaatatgtgtgtagaaaacatggtttagaagccaacatacaaactagggtttatagagaatttctcttggca 2267247  T
Q  224 ac-aacactagggttgggattgttttgattcac 255  Q
    || ||||||| ||||| ||||||||||||||||    
T  2267246 acaaacactacggttgagattgttttgattcac 2267214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 28895353 - 28895493
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| | ||||| |||| |  | ||||||| ||||||||||||||| |||||||||||||||    
T  28895353 ttactttccactataaataca-gccttgtatcagatgataaaagggtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatt 28895451  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||| ||||||||||||||||    
T  28895452 tctcttggcaacaactctagggttgagattgttttgattcac 28895493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 175 - 255
Target Start/End: Original strand, 33032565 - 33032645
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33032565 tttagaagccaacatacaaactagggtttatagagaatttctcttggcaacaacactagggttgagattgttttgattcac 33032645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 255
Target Start/End: Original strand, 28327751 - 28327899
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||||    
T  28327751 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttt 28327847  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  28327848 atagagaatctctcttggcaacaactctagggttgggattgttttgattcac 28327899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 107 - 255
Target Start/End: Complemental strand, 16752862 - 16752713
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa--ctggttttagaagccaacatacaaactaaggtt 202  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| ||||  |  | ||||||  |||||| |||||||| ||||    
T  16752862 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaaacaaggtttaga--ccaacaaacaaactagggtt 16752766  T
Q  203 tatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  16752765 tatagagaatctctcttggcaacaactctagggttgggattgttttgattcac 16752713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 161 - 255
Target Start/End: Complemental strand, 17799709 - 17799615
Alignment:
Q  161 tgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||| ||||| || ||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  17799709 tgtagaaaacagggtttagaagccaacatacaaactaggatttatagagaatttgtctaggcaacaacactagggttgggattgttttgattcac 17799615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 26268501 - 26268421
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  26268501 tttagaagcctacatacaaactagggtttatagagaatttctcttggcaacaacactagagttgagattgttttgattcac 26268421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 4812816 - 4812678
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||| |||||||||     
T  4812816 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttcatagagaatc 4812720  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  4812719 tctcttggcaacaactctagggttgggattgttttgattcac 4812678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 255
Target Start/End: Complemental strand, 16757607 - 16757458
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa--ctggttttagaagccaacatacaaactaaggtt 202  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| ||||  |  | ||||||  |||||| |||||||| ||||    
T  16757607 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaaacaaggtttaga--ccaacaaacaaactagggtt 16757511  T
Q  203 tatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  16757510 tatagagaatctctcttgacaacaactctagggttgggattgttttgattcac 16757458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 25684496 - 25684634
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| ||  |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| ||||||||||||||     
T  25684496 ttactttccactataaatacaac-cttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatc 25684592  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  25684593 tctcttagcaacaactctagggttgggattgttttgattcac 25684634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 30423106 - 30423203
Alignment:
Q  159 tgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcac 255  Q
    |||||| ||||| || |||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||    
T  30423106 tgtgtagaaaacagggtttagaagccaacaaacaaactagggtttatagagaatttctcttggcaacaaacactagggctgagattgttttgattcac 30423203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 255
Target Start/End: Original strand, 28332474 - 28332622
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||| | |||||||| |||||    
T  28332474 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaataaacaaactagggttt 28332570  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||| ||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  28332571 ataaagaatctctcttggtaacaactctagggttgggattgttttgattcac 28332622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 17847604 - 17847669
Alignment:
Q  190 acaaactaaggtttatagagaatttctcttggcaacaa-cactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||||||||||||||    
T  17847604 acaaactaaggtttatagaga-tttctctaggcaacaaacactatggttgggattgttttgattcac 17847669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 15949394 - 15949525
Alignment:
Q  124 cactataaatataagtcttgtatcagatgataaagtgtg-tataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggc 222  Q
    |||||||||||||| ||||||||||||||| ||||||||    ||||| || |||| ||||||||| |||||||| |||||| |||||| |||||||  |    
T  15949394 cactataaatataaatcttgtatcagatga-aaagtgtgaggaaaaacagggtttaaaagccaacacacaaactagggtttacagagaa-ttctctttac 15949491  T
Q  223 aac-aacactagggttgggattgttttgattcac 255  Q
    ||| ||||||||| ||| |||||||| |||||||    
T  15949492 aacaaacactaggtttgtgattgtttggattcac 15949525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 15944733 - 15944864
Alignment:
Q  124 cactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctcttggc 222  Q
    ||||||| ||||||  ||||||||| |||| |||||||||  |||| | || ||||||||| |||| ||||| || |||||||||||||  |||||||||    
T  15944733 cactatagatataaaccttgtatcatatga-aaagtgtgtggaaaaacagggtttagaagctaacaaacaaattagggtttatagagaa-atctcttggc 15944830  T
Q  223 aac-aacactagggttgggattgttttgattcac 255  Q
    ||| ||||||||||||  ||||| ||||||||||    
T  15944831 aacaaacactagggttctgattgctttgattcac 15944864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 28228425 - 28228476
Alignment:
Q  175 tttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaa 227  Q
    |||||||| ||||| | |||||||||||||||||||| |||| ||||||||||    
T  28228425 tttagaaggcaacaaataaactaaggtttatagagaa-ttcttttggcaacaa 28228476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 20 - 255
Target Start/End: Complemental strand, 17841676 - 17841440
Alignment:
Q  20 aacgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttac 119  Q
    |||||||||||||| |||| |||| || ||||||||||| ||||||||||||||| |||||||| |||| ||||||||||||||||||| |||||||||     
T  17841676 aacgtgccacgatgcaatcataacgtgacacgatggtacactgaaggaaataacataaacgtatattcagtgaagatttgttccatattttaagggttaa 17841577  T
Q  120 tttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctctt 219  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||| ||||| || ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  17841576 tttccactataaatataagccttgtatcggatgataaagtgcgtagaaaacagggtttagaaaccatcatacaaactagggtttatagagaatttctctt 17841477  T
Q  220 ggc-aacaacactagggttgggattgttttgattcac 255  Q
    ||| ||||| |||||||||| ||||||||||||||||    
T  17841476 ggcaaacaatactagggttgagattgttttgattcac 17841440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 42238059 - 42238294
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattat--aagggttac 119  Q
    |||||||||||| ||||| ||| |||||||||||| || |  |||| | |||| ||||||||||||| |||||||||||| ||  || |  |||||||||    
T  42238059 cgtgccacgatgaaatcgcaacgtggcacgatggtgcgattgaggataaaacaaaaacgtattttcagtgaagatttgtttcaattttttaaagggttac 42238158  T
Q  120 tttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctct 218  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||| |||| | || ||||||||||||||||||||||| ||||||||||||||||||||    
T  42238159 tttccactataaatataaaccttgtatca-atgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagagaatttctct 42238257  T
Q  219 tggcaacaacactagggttgggattgttttgattcac 255  Q
    | |||||||||||||||||||||||||||||||||||    
T  42238258 ttgcaacaacactagggttgggattgttttgattcac 42238294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 40222519 - 40222754
Alignment:
Q  22 cgtgccacgatgtaatcgtaacatggcacgatggtacgctgaaggaaataacagaaacgtattttcaatgaagatttgttccatattat--aagggttac 119  Q
    |||||||||||| ||||| ||| ||||||||||||||| |  |||| | || | |||||| |||||| |||| ||||||| ||  || |  |||| ||||    
T  40222519 cgtgccacgatgaaatcgcaacgtggcacgatggtacgattgaggataaaataaaaacgtgttttcagtgaaaatttgtttcaattttttaaaggattac 40222618  T
Q  120 tttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttctct 218  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||| |  | ||||||||||||||||||||||| ||||||||||||||||||||    
T  40222619 tttc-actataaatataagccttgtatcagatgataaagtgtgtagaaaaacaaggtttagaagccaacatacaaactagggtttatagagaatttctct 40222717  T
Q  219 tggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||| ||||||||||||||||    
T  40222718 tggcaacaacactagggttgagattgttttgattcac 40222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 22672685 - 22672825
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  22672685 ttactttccactataaatagaagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 22672784  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22672785 ctcttggcaacaacactagggttgggattgttttgattcac 22672825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 114 - 255
Target Start/End: Original strand, 1240277 - 1240419
Alignment:
Q  114 ggttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaat 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||||||||||||||||||| |||||||||| | |    
T  1240277 ggttactttctactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaagccaacatacaaactagggtttatagatatt 1240376  T
Q  213 ttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  1240377 ttctctttgcaacaacactagggttgggattgttttgattcac 1240419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 35385783 - 35385643
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||| |    ||||||| | ||||||||||||| ||||||||||||||||    
T  35385783 ttactttccactataaatataagccttgtatcaaatgataaagtgtgtagaaaaacaaagtttagaaactaacatacaaactagggtttatagagaattt 35385684  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  35385683 ctcttggcaacaactctagggttgggattgttttgattcac 35385643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 119 - 255
Target Start/End: Complemental strand, 11962759 - 11962624
Alignment:
Q  119 ctttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctct 218  Q
    |||||||||||||||||||  ||||||||| |||| | | |||||| ||||| || ||||||||||||||||||||||| |||| |||||||||||||||    
T  11962759 ctttccactataaatataaaccttgtatcatatga-atattgtgtagaaaacagggtttagaagccaacatacaaactatggttcatagagaatttctct 11962661  T
Q  219 tggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||| ||||||||||||||||    
T  11962660 tggcaacaacactagggttgagattgttttgattcac 11962624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 25445343 - 25445483
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtata-aaactggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    |||| |||||||||||||| | |||||||||||||||||||| ||||||| | ||||  | ||||||| ||||||||||||||| |||||||||||||||    
T  25445343 ttaccttccactataaataca-gtcttgtatcagatgataaaagtgtgtagataaacaaggtttagaaaccaacatacaaactagggtttatagagaatt 25445441  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  25445442 tctcttggcaacaactctagggttgggattgttttgattcac 25445483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 119 - 248
Target Start/End: Original strand, 10627217 - 10627347
Alignment:
Q  119 ctttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctct 218  Q
    |||||||||||||||||||| |||||||||||| || | ||||||| ||||| || |||||||||||||||||||||||  |||||||||||||||||||    
T  10627217 ctttccactataaatataagccttgtatcagattattatgtgtgtagaaaacagggtttagaagccaacatacaaactagtgtttatagagaatttctct 10627316  T
Q  219 tggcaac-aacactagggttgggattgtttt 248  Q
    | ||||| |||||||||||| ||||||||||    
T  10627317 tagcaacaaacactagggttaggattgtttt 10627347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 2298332 - 2298192
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | ||||||||| |||||||| ||||||| |||| |  | ||||||| ||||||||||||||| ||||||||||||||     
T  2298332 ttactttccactataaataca-gccttgtatcatatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatc 2298234  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  2298233 tctcttggcaacaactctagggttgggattgttttgattcac 2298192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 25452346 - 25452486
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | ||||||| |||||||||| ||||||| |||| |  | ||||||| ||||||||||||||| |||||||||||||||    
T  25452346 ttactttccactataaataca-gccttgtattagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatt 25452444  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  25452445 tctcttggcaacaactctagcgttgggattgttttgattcac 25452486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 255
Target Start/End: Complemental strand, 16093617 - 16093481
Alignment:
Q  120 tttccactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctctt 219  Q
    |||||||||||||||||   ||||||||| || || | ||||||| ||||| || ||||||||||||||||||||||| |||||||||| ||||||||||    
T  16093617 tttccactataaatatataccttgtatcaaataattatgtgtgtagaaaacagggtttagaagccaacatacaaactagggtttatagataatttctctt 16093518  T
Q  220 ggcaac-aacactagggttgggattgttttgattcac 255  Q
    |||||| |||||||||||||||||  |||||||||||    
T  16093517 ggcaacaaacactagggttgggatctttttgattcac 16093481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 255
Target Start/End: Original strand, 1170654 - 1170802
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| |||||| |||||||||||| | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||||    
T  1170654 ttataagggtttactttctactataaatata-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttt 1170750  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  1170751 atagagaatctctcttggcaacaactctagggttgggattgttttgattcac 1170802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 164 - 255
Target Start/End: Complemental strand, 31782740 - 31782648
Alignment:
Q  164 ataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgggattgttttgattcac 255  Q
    ||||||| || ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  31782740 ataaaacagggtttagaagccaacatacaaactagggtttatagataatttctcttggcaacaaacactagggttgggattgttttgattcac 31782648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 26406795 - 26406664
Alignment:
Q  124 cactataaatataagtcttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggca 223  Q
    ||||||||||| ||  ||||||||| |||| || ||||||| ||||| || ||||||| |||||| |||||||| ||||||||||||| |||||||||||    
T  26406795 cactataaatagaaaccttgtatcatatgaaaatgtgtgtagaaaacagggtttagaaaccaacaaacaaactagggtttatagagaa-ttctcttggca 26406697  T
Q  224 ac-aacactagggttgggattgttttgattcac 255  Q
    || ||||||||||||| ||||||||||||||||    
T  26406696 acaaacactagggttgagattgttttgattcac 26406664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 255
Target Start/End: Original strand, 25837984 - 25838098
Alignment:
Q  141 ttgtatcagatgataaagtgtgtataaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaac-aacactagggttgg 239  Q
    |||||||| |||| || ||||||| |||||  | |||||||||||||| | |||||| ||||||||||||| ||||||||| ||| |||||||||||||     
T  25837984 ttgtatcatatgaaaacgtgtgtagaaaacaaggtttagaagccaacaaagaaactatggtttatagagaa-ttctcttggtaacaaacactagggttga 25838082  T
Q  240 gattgttttgattcac 255  Q
    ||||||||||||||||    
T  25838083 gattgttttgattcac 25838098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 28786308 - 28786395
Alignment:
Q  166 aaaactggttttagaagccaacatacaaactaaggtttatagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||| || |||||||| |||||||||||| |||| ||||| |||| |||||||| |||||||||||||||||| |||||||||||||||    
T  28786308 aaaacaggatttagaaggcaacatacaaac-aagggttataaagaacttctcttg-caacaacactagggttggaattgttttgattcac 28786395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 4236498 - 4236603
Alignment:
Q  45 tggcacgatggtacgctga-aggaaataacagaaacgtattttcaatgaagatttgttccatattataagggttactttccactataaatataagtcttg 143  Q
    |||||||||||| |||||  ||| || |||||||||||||||| | || |||||||||||| ||| |||| | ||||||  ||||||||||||   ||||    
T  4236498 tggcacgatggtgcgctggcagggaaaaacagaaacgtattttgagtgcagatttgttccaaattttaagcgatacttt-tactataaatatagaccttg 4236596  T
Q  144 tatcaga 150  Q
    |||||||    
T  4236597 tatcaga 4236603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 188573 - 188433
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  188573 ttactttccactataaatataagccttgtatcagatgataaagtgtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 188474  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  188473 ctcttggcaacaacactagggttgggattgttttgattcac 188433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 17317 - 17178
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaagtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaattt 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| | || ||||||| ||||||||||||||| ||||||||||||||||    
T  17317 ttactttccactataaatataagccttgtatcagatgataaagagtgtagaaaaacagggtttagaaaccaacatacaaactagggtttatagagaattt 17218  T
Q  215 ctcttggcaacaacactagggttgggattgttttgattca 254  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  17217 ctcttggcaacaacactagggttgggattgttttgtttca 17178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 16176 - 16316
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    ||||||||||||||||||| | | |||||||||||||||||| ||||||| |||| | || ||||||||||||||| ||||||| |||||||||||||||    
T  16176 ttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacagggtttagaagccaacattcaaactagggtttatagagaatt 16274  T
Q  214 tctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16275 tctcttggcaacaacactagggttgggattgttttgattcac 16316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 255
Target Start/End: Original strand, 30984 - 31132
Alignment:
Q  107 ttataagggtt-actttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggttt 203  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||||    
T  30984 ttataagggtttactttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggttt 31080  T
Q  204 atagagaatttctcttggcaacaacactagggttgggattgttttgattcac 255  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  31081 atagagaatctctcttggcaacaactctagggttgggattgttttgattcac 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 255
Target Start/End: Original strand, 224675 - 224810
Alignment:
Q  119 ctttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatttct 216  Q
    |||||||||||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||  |||||| |||||||| |||||||||||||| |||    
T  224675 ctttccactataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttaga--ccaacaaacaaactagggtttatagagaatctct 224771  T
Q  217 cttggcaacaacactagggttgggattgttttgattcac 255  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  224772 cttggcaacaactctagggttgggattgttttgattcac 224810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 1287 - 1391
Alignment:
Q  116 ttactttccactataaatataagtcttgtatcagatgataaa-gtgtgtataaaa-ctggttttagaagccaacatacaaactaaggtttatagagaatt 213  Q
    |||||||||| |||||||| | | |||||||||||||||||| ||||||| |||| |  | ||||||| ||||||||||||||| |||||||||||||||    
T  1287 ttactttccaatataaataca-gccttgtatcagatgataaaagtgtgtagaaaaacaaggtttagaaaccaacatacaaactagggtttatagagaatt 1385  T
Q  214 tctctt 219  Q
    ||||||    
T  1386 tctctt 1391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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