View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17892_low_1 (Length: 555)
Name: NF17892_low_1
Description: NF17892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17892_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 457; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 457; E-Value: 0
Query Start/End: Original strand, 18 - 538
Target Start/End: Original strand, 32171231 - 32171745
Alignment:
| Q |
18 |
accaacgcaaacaagaataagaagatgctaggacgaacttataaaagtggattagaatagaagatgtatatggaaagatgaatgatcatcaatttcatgt |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32171231 |
accaacgcaaacaagaataagaagatgctaggacgaacttataaaagtggattagaatagaagatgtatatggaaagatgaatgatcatcaatttcatgt |
32171330 |
T |
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| Q |
118 |
gaaatatatatatcaaaatgtgatcgccacaagagatttagaaagtctcttcgaagagaatttctatacaagcataaaaatggtaaacttcaactatcat |
217 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
32171331 |
gaaatatatatatcaaaatgtgatcgccactc---atttagaaagtctctttgaagagaatttctatacgagcataaaaatggtaaacttcaactatcat |
32171427 |
T |
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| Q |
218 |
ccaataactagttaaaatgtgggcaaagaacttgtcctttgcatgaagagtgacacttgcaaagttggtcatcgaggcaacgcctgtttattgtatgatg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32171428 |
ccaataactagttaaaatgtgggcaaagaacttgtcctttgcatgaagagtgacacttgcaaagttggtcatcgagacaacgcctgtttattgtatgatg |
32171527 |
T |
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| Q |
318 |
attacttctatacatacctcaaaccatcttgttgaatgttcaaaatttacagcgtaacttcatttggggtcaagaggaagcttcatttggttaagtggga |
417 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32171528 |
attacttctatacatacctcaaaccatcttgttgaatattcaaaatttacagcgtaacttcatttggggtcaagaggaagcttcacttggttaagtggga |
32171627 |
T |
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| Q |
418 |
cacaatgttgttgcataatttgcgtggtggtttagctatttggtgtccacctactatgaattgtgcttgtttagtgaagatgggttgggagatgaaggag |
517 |
Q |
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||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32171628 |
cacaa---tgttgcataatttgcatggtggtttagctatttggtgtccacctactatgaattgtgcttgtttagtgaagatgggttgggagatgaaggag |
32171724 |
T |
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| Q |
518 |
aggtaagtgtatagcttgtgg |
538 |
Q |
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|||||| |||||||||||||| |
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| T |
32171725 |
aggtaaatgtatagcttgtgg |
32171745 |
T |
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