View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17893_low_13 (Length: 216)

Name: NF17893_low_13
Description: NF17893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17893_low_13
NF17893_low_13
[»] chr3 (26 HSPs)
chr3 (1-212)||(11219525-11219736)
chr3 (6-212)||(32979188-32979394)
chr3 (6-182)||(17349942-17350118)
chr3 (6-182)||(39133117-39133293)
chr3 (1-182)||(53808413-53808594)
chr3 (6-160)||(7483387-7483541)
chr3 (1-127)||(34902889-34903015)
chr3 (6-212)||(47765538-47765746)
chr3 (1-182)||(8371315-8371496)
chr3 (1-113)||(12062293-12062405)
chr3 (6-144)||(31638218-31638355)
chr3 (1-102)||(23559914-23560015)
chr3 (87-160)||(7483255-7483328)
chr3 (7-80)||(19622106-19622179)
chr3 (1-141)||(25583209-25583348)
chr3 (1-93)||(35174311-35174403)
chr3 (40-108)||(43346361-43346429)
chr3 (70-135)||(20314647-20314713)
chr3 (5-111)||(21128024-21128130)
chr3 (25-111)||(48254800-48254886)
chr3 (20-108)||(48867344-48867432)
chr3 (71-122)||(5123244-5123294)
chr3 (70-135)||(20336540-20336606)
chr3 (35-124)||(42685008-42685097)
chr3 (64-140)||(41264531-41264607)
chr3 (13-113)||(49333090-49333189)
[»] chr2 (24 HSPs)
chr2 (1-212)||(12852981-12853192)
chr2 (33-212)||(6708789-6708968)
chr2 (5-212)||(23177773-23177980)
chr2 (5-212)||(23589030-23589237)
chr2 (21-156)||(3528130-3528266)
chr2 (6-182)||(14714592-14714768)
chr2 (6-160)||(4512206-4512360)
chr2 (6-153)||(29424481-29424628)
chr2 (26-156)||(7983561-7983691)
chr2 (6-207)||(21010312-21010514)
chr2 (7-113)||(26205114-26205220)
chr2 (6-127)||(41296349-41296470)
chr2 (1-124)||(3532289-3532412)
chr2 (1-111)||(14509304-14509414)
chr2 (3-111)||(8537109-8537217)
chr2 (1-102)||(25570790-25570891)
chr2 (11-75)||(45047447-45047511)
chr2 (7-124)||(35799613-35799730)
chr2 (1-113)||(4829560-4829672)
chr2 (6-89)||(10367339-10367422)
chr2 (6-89)||(37868973-37869056)
chr2 (5-111)||(28109780-28109886)
chr2 (64-113)||(34512973-34513022)
chr2 (3-111)||(15850571-15850678)
[»] chr1 (21 HSPs)
chr1 (1-212)||(26055957-26056168)
chr1 (6-207)||(50678463-50678663)
chr1 (6-182)||(30551429-30551605)
chr1 (6-182)||(37624410-37624586)
chr1 (8-182)||(51218805-51218980)
chr1 (6-156)||(9633875-9634025)
chr1 (9-129)||(52742869-52742989)
chr1 (6-189)||(23081959-23082142)
chr1 (6-182)||(27689383-27689563)
chr1 (1-182)||(14764324-14764505)
chr1 (7-93)||(44977322-44977408)
chr1 (6-113)||(22766729-22766836)
chr1 (5-104)||(49141414-49141513)
chr1 (1-100)||(51726766-51726865)
chr1 (1-100)||(21277089-21277188)
chr1 (1-94)||(14169714-14169807)
chr1 (7-90)||(8092699-8092782)
chr1 (57-111)||(40811403-40811457)
chr1 (58-116)||(51300163-51300221)
chr1 (67-104)||(41872740-41872777)
chr1 (62-103)||(42246047-42246087)
[»] scaffold1974 (1 HSPs)
scaffold1974 (5-212)||(438-645)
[»] scaffold1878 (1 HSPs)
scaffold1878 (5-212)||(629-836)
[»] chr5 (14 HSPs)
chr5 (6-207)||(21387737-21387937)
chr5 (6-160)||(18693798-18693951)
chr5 (26-127)||(7426761-7426862)
chr5 (5-124)||(40058117-40058236)
chr5 (1-95)||(5383037-5383131)
chr5 (4-113)||(2167424-2167532)
chr5 (64-140)||(30910904-30910980)
chr5 (5-111)||(15856632-15856738)
chr5 (26-62)||(7345350-7345386)
chr5 (40-111)||(223360-223431)
chr5 (1-103)||(32734226-32734328)
chr5 (5-89)||(19525221-19525305)
chr5 (64-124)||(22308694-22308754)
chr5 (47-103)||(24761620-24761676)
[»] scaffold0051 (1 HSPs)
scaffold0051 (6-160)||(39763-39917)
[»] chr8 (35 HSPs)
chr8 (8-155)||(37276110-37276257)
chr8 (6-160)||(13513520-13513674)
chr8 (6-160)||(13603053-13603207)
chr8 (1-151)||(36756159-36756309)
chr8 (6-160)||(21670164-21670318)
chr8 (6-182)||(13363418-13363594)
chr8 (6-182)||(44103134-44103312)
chr8 (1-212)||(7486172-7486383)
chr8 (6-156)||(10052204-10052354)
chr8 (6-124)||(21961923-21962041)
chr8 (26-210)||(45541604-45541783)
chr8 (6-127)||(117148-117268)
chr8 (6-127)||(39546572-39546693)
chr8 (1-111)||(13366961-13367071)
chr8 (6-126)||(39325729-39325850)
chr8 (7-113)||(21267233-21267339)
chr8 (1-103)||(35944003-35944105)
chr8 (1-76)||(36938776-36938851)
chr8 (4-111)||(44606237-44606344)
chr8 (4-123)||(2421191-2421311)
chr8 (1-113)||(8095441-8095553)
chr8 (1-100)||(36070273-36070372)
chr8 (5-111)||(24069357-24069463)
chr8 (5-111)||(34617106-34617212)
chr8 (5-111)||(7770809-7770915)
chr8 (5-111)||(7796719-7796825)
chr8 (5-111)||(7816000-7816106)
chr8 (1-102)||(20308700-20308801)
chr8 (1-102)||(21095333-21095434)
chr8 (5-89)||(19913591-19913675)
chr8 (64-111)||(6397943-6397990)
chr8 (1-54)||(16363780-16363833)
chr8 (26-111)||(39515319-39515404)
chr8 (35-116)||(41629839-41629920)
chr8 (6-86)||(12281716-12281796)
[»] chr4 (28 HSPs)
chr4 (6-144)||(44302820-44302958)
chr4 (6-182)||(29687818-29687994)
chr4 (6-182)||(43894205-43894381)
chr4 (8-160)||(2293386-2293539)
chr4 (1-212)||(11094621-11094831)
chr4 (1-160)||(38418879-38419038)
chr4 (6-160)||(36604702-36604857)
chr4 (1-127)||(39592184-39592310)
chr4 (6-126)||(35787896-35788016)
chr4 (6-127)||(6616105-6616227)
chr4 (1-103)||(50530598-50530700)
chr4 (1-73)||(86898-86970)
chr4 (1-103)||(6140279-6140381)
chr4 (26-111)||(26393038-26393123)
chr4 (83-143)||(36604586-36604646)
chr4 (9-111)||(38555187-38555289)
chr4 (6-92)||(47668527-47668613)
chr4 (72-182)||(52980150-52980260)
chr4 (64-140)||(7707751-7707827)
chr4 (5-124)||(38370381-38370501)
chr4 (1-104)||(17319137-17319240)
chr4 (5-111)||(3533519-3533625)
chr4 (5-103)||(11114899-11114997)
chr4 (25-111)||(29663761-29663847)
chr4 (5-111)||(56000386-56000492)
chr4 (64-124)||(1794574-1794634)
chr4 (1-108)||(17494222-17494329)
chr4 (5-111)||(56296292-56296398)
[»] scaffold0084 (1 HSPs)
scaffold0084 (6-182)||(13044-13220)
[»] scaffold0098 (1 HSPs)
scaffold0098 (15-182)||(41017-41184)
[»] scaffold0290 (1 HSPs)
scaffold0290 (5-121)||(9379-9495)
[»] chr7 (15 HSPs)
chr7 (7-160)||(24494911-24495066)
chr7 (6-127)||(14108966-14109087)
chr7 (6-127)||(14418923-14419044)
chr7 (26-127)||(4167571-4167672)
chr7 (1-127)||(38406113-38406238)
chr7 (60-160)||(35315099-35315199)
chr7 (5-111)||(25154847-25154953)
chr7 (12-123)||(131898-132009)
chr7 (26-156)||(19848700-19848830)
chr7 (5-135)||(26406224-26406354)
chr7 (26-103)||(10256243-10256320)
chr7 (5-89)||(46458646-46458730)
chr7 (26-156)||(18801335-18801465)
chr7 (1-52)||(4857296-4857347)
chr7 (3-111)||(35484222-35484329)
[»] scaffold0015 (1 HSPs)
scaffold0015 (6-124)||(207696-207814)
[»] chr6 (11 HSPs)
chr6 (6-156)||(18139352-18139503)
chr6 (102-211)||(34084045-34084154)
chr6 (8-155)||(33801884-33802031)
chr6 (1-89)||(14328707-14328795)
chr6 (1-89)||(14421717-14421805)
chr6 (11-126)||(13507068-13507182)
chr6 (5-111)||(293551-293657)
chr6 (1-111)||(27440086-27440196)
chr6 (1-113)||(2130878-2130990)
chr6 (1-104)||(9927700-9927802)
chr6 (71-120)||(16268706-16268755)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-111)||(16040-16150)
[»] scaffold0025 (1 HSPs)
scaffold0025 (21-126)||(56595-56701)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-111)||(77090-77202)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-111)||(47165-47275)
[»] scaffold0128 (1 HSPs)
scaffold0128 (62-116)||(22139-22193)
[»] scaffold2071 (1 HSPs)
scaffold2071 (64-124)||(576-636)
[»] scaffold0166 (1 HSPs)
scaffold0166 (47-103)||(4117-4173)


Alignment Details
Target: chr3 (Bit Score: 168; Significance: 3e-90; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 11219525 - 11219736
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11219525 tactattttggtcatctccgttagattttaacatcaaaattctaaggtgaaccatatttaaaggtggttcaccatagatcgtattaaattttttaatttt 11219624  T
Q  101 aaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttctt 200  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||  ||  |||||||||||||||||||||| ||||||||||    
T  11219625 aaccatttgattttttctttaaaagaggaccgttgaattatgtagggtctattgtactttcctgtgaaccactaacacctaacacttttctcattttctt 11219724  T
Q  201 catcttcatctc 212  Q
    ||||||| ||||    
T  11219725 catcttcttctc 11219736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 32979188 - 32979394
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32979188 ttttggtcctctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 32979287  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttcttcatct 205  Q
    ||||||| |||||||||||||  || ||||||||||||| ||| ||||||||||| | ||  | ||||||||||||| |||||| ||| |||||||||||    
T  32979288 tttgattgattctttaaaagatgactgttgaattatgtagggtatattgtactttattgtaaatcactaacacctaatacttttctcactttcttcatct 32979387  T
Q  206 tcatctc 212  Q
    || ||||    
T  32979388 tcttctc 32979394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 17350118 - 17349942
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||  || || |||||||||||||||||||||    
T  17350118 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaattttttaattttaacca 17350019  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    |||||||| ||||||||||||| |||||||||| ||||| ||||||||| ||||| | ||  |||||||||||||||    
T  17350018 tttgattttttctttaaaagaggaccgttgaatcatgtagggtctattgaactttattgtgaaccactaacacctaa 17349942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 39133117 - 39133293
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||  || || |||||||||||||||||||||    
T  39133117 ttttggtcctctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaattttttaattttaacca 39133216  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    |||||||| ||||||||||||| || ||||||| ||||| ||||||||||||||| | ||  |||||||||||||||    
T  39133217 tttgattttttctttaaaagaggacagttgaatcatgtaaggtctattgtactttattgtgaaccactaacacctaa 39133293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 53808413 - 53808594
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||||||||| |||| |||||||||||||  ||||||||||| ||||| |||||||||| ||||||| ||| |||||||||||| ||||||    
T  53808413 tactattttggtcatctccattagtttttaacatcaaatttctaaggtgaatcatatctaaaggtggtccaccataaaccttattaaatttttaaatttt 53808512  T
Q  101 aaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    |||| |||||||| ||||||||||||||| ||||| || ||||| | ||||||||| |||   ||  |||||||||||||||    
T  53808513 aaccctttgattttttctttaaaagagaatcgttggatcatgtaggatctattgtattttactgtgaaccactaacacctaa 53808594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 7483541 - 7483387
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||| ||||  |||||||  || |||||| |||||||||||||||||    
T  7483541 ttttggtcatctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggcccaccatatgccttattaatttttttaattttaacca 7483442  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    |||||||| ||||||||||||| |||||||||| ||||  |||||||| ||||||    
T  7483441 tttgattttttctttaaaagaggaccgttgaatcatgtggggtctattatacttt 7483387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 34903015 - 34902889
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    |||| ||||||||||||||||||| |||||||| |||| |||||| |||||||||||||||||||||| |||||| |||| || ||||||||||||||||    
T  34903015 tactcttttggtcatctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcaccatggaccttagtaaattttttaatttt 34902916  T
Q  101 aaccatttgatttattctttaaaagag 127  Q
    |||| |||||||| ||| |||||||||    
T  34902915 aaccttttgattttttcattaaaagag 34902889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 47765538 - 47765746
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    ||||||||||||||||||| |||||||||||||  ||| |||||||||||  |||||| |||| ||||||||||| |||| ||||||| ||||||||||     
T  47765538 ttttggtcatctccgttagtttttaacatcaaatatcttaggtgaaccattgttaaagatggtccaccatagaccttattgaatttttaaattttaacct 47765637  T
Q  106 tttga-tttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttca-ttttcttcat 203  Q
    ||||| ||| ||||||||||||| |  |||| || ||||| ||||||||||| |||   ||  ||||||||||| ||| | | |||||| ||||||||||    
T  47765638 tttgatttttttctttaaaagaggattgttggatcatgtagggtctattgtattttagcgtgaaccactaacacttaatattcttttcacttttcttcat 47765737  T
Q  204 cttcatctc 212  Q
    |||| ||||    
T  47765738 cttcttctc 47765746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 8371315 - 8371496
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| |||||||||| |||||||||||||  ||||| | ||||| || ||| ||||||| |||||| |||| || ||||||||||||||||    
T  8371315 tactattttggtcctctccgttagtttttaacatcaaatatctaaagcgaaccgtacttagaggtggtccaccatggaccttagtaaattttttaatttt 8371414  T
Q  101 aaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    |||| |||||||| ||||||||||||| |  |||| || || ||| |||||||||| | | | ||  |||||||||||||||    
T  8371415 aaccctttgattttttctttaaaagaggattgttggatcatatatagtctattgtattctattgtaaaccactaacacctaa 8371496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12062405 - 12062293
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||||| ||| |||| ||||||| | ||| |||||||||||||||  |||| ||||| | ||||||| ||| |||||||| || || ||||    
T  12062405 tactattttggtcatttccattagtttttaaccttaaatgtctaaggtgaaccaactttataggtgatccaccatataccttattaaatcttgtattttt 12062306  T
Q  101 aaccatttgattt 113  Q
    |||||||||||||    
T  12062305 aaccatttgattt 12062293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 31638218 - 31638355
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagt--ctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaac 103  Q
    ||||| || |||||| ||| |||||||||||||  |  |||||||||||||||||||||||||||  ||||||  || || |||||||||||||||||      
T  31638218 ttttgatcctctccgctagtttttaacatcaaatatatctaaggtgaaccatatttaaaggtggtctaccatacgccttactaaattttttaatttta-- 31638315  T
Q  104 catttgatttattctttaaaagagaaccgttgaattatgta 144  Q
      |||||||| ||||||||||||  || ||||||| |||||    
T  31638316 -ctttgattttttctttaaaagaagacagttgaatcatgta 31638355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23559914 - 23560015
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| |||||||||| ||||||| | ||  ||||||| |||||||  |||| ||||||| ||||||||| | |||||||| ||||| ||||    
T  23559914 tactattttggtcctctccgttagtttttaaccttaattgtctaagatgaaccaactttataggtggtccaccatagatcttattaaatcttttattttt 23560013  T
Q  101 aa 102  Q
    ||    
T  23560014 aa 23560015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 7483328 - 7483255
Alignment:
Q  87 aattttttaattttaaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    ||||||||||||||| ||||||||||| ||  ||||||||| |||||||||| ||||  |||||||| ||||||    
T  7483328 aattttttaattttatccatttgatttttttgttaaaagaggaccgttgaatcatgtggggtctattatacttt 7483255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 19622106 - 19622179
Alignment:
Q  7 tttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagacc 80  Q
    ||||||| |||||||||| ||| ||||||||| || |||||||||| || |||||||||||| |||| ||||||    
T  19622106 tttggtcctctccgttagttttcaacatcaaatgtttaaggtgaactatgtttaaaggtggtccaccgtagacc 19622179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 25583209 - 25583348
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| |||| ||||  ||||||| | ||| |||||||| |||| ||||| ||||||| | |||||||| || ||| || |  |||||||||    
T  25583209 tactattttggtcctctctgttaatttttaaccttaaatgtctaaggcgaactatatt-aaaggtgctccaccataggccttataaattcatttaatttt 25583307  T
Q  101 aaccatttgatttattctttaaaagagaaccgttgaattat 141  Q
    |||  |||||| | || || ||||||||||||||| |||||    
T  25583308 aactttttgatatttttttaaaaagagaaccgttggattat 25583348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 35174403 - 35174311
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttt 93  Q
    ||||||||||||||| || ||||  ||||||| | |||||||||||||||||||  |||| |||| || ||| | ||||| ||||||||||||    
T  35174403 tactattttggtcatttctgttaatttttaaccttaaaagtctaaggtgaaccaactttataggtagtccacgagagaccttattaaattttt 35174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 43346429 - 43346361
Alignment:
Q  40 gtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccattt 108  Q
    |||||||||| ||||   ||| ||||||| ||||||||||| || ||||||||||||||||||||||||    
T  43346429 gtctaaggtggaccaacattataggtggtccaccatagaccttactaaattttttaattttaaccattt 43346361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 20314713 - 20314647
Alignment:
Q  70 caccatagaccgtattaaattttttaattttaaccatttgatttattcttt-aaaagagaaccgttg 135  Q
    ||||||||||| |||||| || |||||||| |||||||||||||||| ||| ||||||| |||||||    
T  20314713 caccatagaccttattaatttatttaatttaaaccatttgatttattttttcaaaagaggaccgttg 20314647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 21128024 - 21128130
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||||| |||||  | |||||||   ||| |||||||||| ||||   ||| ||||||| ||||||||||| ||  || ||||||||||||||||    
T  21128024 attttggtcatttccgtctgtttttaaccctaaatgtctaaggtggaccaacattataggtggtccaccatagaccttacaaagttttttaattttaacc 21128123  T
Q  105 atttgat 111  Q
    |||||||    
T  21128124 atttgat 21128130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 48254886 - 48254800
Alignment:
Q  25 attttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgat 111  Q
    |||||||||| ||| |||||||||| ||||   ||| ||||||| ||||||| ||| || ||| ||||||||||||||||| |||||    
T  48254886 attttaacattaaatgtctaaggtggaccaacattataggtggtccaccataaaccttactaagttttttaattttaaccacttgat 48254800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 48867432 - 48867344
Alignment:
Q  20 gttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccattt 108  Q
    ||||| ||||||| | ||| |||||||||||||||  |||  |||||||  |||||||||  ||||||| ||| |||||||||||||||    
T  48867432 gttagtttttaaccttaaatgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaaatttgtaattttaaccattt 48867344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 5123294 - 5123244
Alignment:
Q  71 accatagaccgtattaaattttttaattttaaccatttgatttattctttaa 122  Q
    |||||||||| |||||| ||||||||||||||||||||||| |||| |||||    
T  5123294 accatagaccttattaa-ttttttaattttaaccatttgatctattttttaa 5123244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 20336606 - 20336540
Alignment:
Q  70 caccatagaccgtattaaattttttaattttaaccatttgattta-ttctttaaaagagaaccgttg 135  Q
    ||||||||||| |||||| || |||||||| |||||||  ||||| || ||||||||||||||||||    
T  20336606 caccatagaccttattaatttatttaatttaaaccattcaatttatttttttaaaagagaaccgttg 20336540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 42685008 - 42685097
Alignment:
Q  35 caaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaa 124  Q
    |||| ||||| |||||||||   ||||  ||||| ||||||| ||| |||||||||||||||||| |||| |||||| | || |||||||    
T  42685008 caaatgtctatggtgaaccaagcttaagagtggtccaccataaaccttattaaattttttaatttaaaccgtttgatctgttttttaaaa 42685097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 41264607 - 41264531
Alignment:
Q  64 gtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaagagaaccgttgaatta 140  Q
    ||||| ||||||||| | |||||| | |||||||||  ||| |||||||| || || ||||||||||| ||||||||    
T  41264607 gtggtacaccatagatcctattaattattttaatttcgaccgtttgatttttttttaaaaagagaaccattgaatta 41264531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 49333090 - 49333189
Alignment:
Q  13 catctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatt 112  Q
    |||||| ||||| |||| || | ||| |||||||||||| ||  ||||  |||||| ||||||||||| |||| ||| ||||| |||||||| |||||||    
T  49333090 catctcggttagtttttcaccttaaacgtctaaggtgaatcaactttatgggtggtccaccatagaccttatt-aatcttttatttttaaccgtttgatt 49333188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 3e-90; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 12852981 - 12853192
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12852981 tactattttggtcatctccgttagattttaacatcaaaaatctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatttttgaatttt 12853080  T
Q  101 aaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttctt 200  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||  |||||||||||||||  ||| |||||||||||||||||||||| ||||||||||    
T  12853081 aaccatttgatttattctttaaaagaggaccattgaattatgtagagtctattgtactttcctgtcaaccactaacacctaacacttttctcattttctt 12853180  T
Q  201 catcttcatctc 212  Q
    ||||||| ||||    
T  12853181 catcttcttctc 12853192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 6708968 - 6708789
Alignment:
Q  33 atcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaagagaaccg 132  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||    
T  6708968 atcaaaagtctgaggtgaaccatatttaaaggtggttcaccataaaccgtattaaattttctaattttaaccatttgatttattctttaaaaaaggaccg 6708869  T
Q  133 ttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttcttcatcttcatctc 212  Q
    |||||||||||| ||||||||| ||||||  ||  |||||||||||||||||||||| ||||||||||||||||| ||||    
T  6708868 ttgaattatgtagggtctattgcactttcctgtgaaccactaacacctaacacttttctcattttcttcatcttcttctc 6708789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 23177773 - 23177980
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||| |||||||||| ||||||||| |||| |||||| |||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||    
T  23177773 attttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacc 23177872  T
Q  105 atttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttcttcatc 204  Q
    ||||||||| ||||||||| | | |||||||||||||||  |||||||||||||||   ||  |||||||||||||||  ||||| ||||||||||||||    
T  23177873 atttgattttttctttaaatgcggaccgttgaattatgtcgggtctattgtactttactgtgaaccactaacacctaattcttttatcattttcttcatc 23177972  T
Q  205 ttcatctc 212  Q
    ||||||||    
T  23177973 ttcatctc 23177980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 23589030 - 23589237
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||| |||||||||| ||||||||| |||| |||||| |||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||    
T  23589030 attttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacc 23589129  T
Q  105 atttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttcttcatc 204  Q
    ||||||||| ||||||||| | | |||||||||||||||  |||||||||||||||   ||  |||||||||||||||  ||||| ||||||||||||||    
T  23589130 atttgattttttctttaaatgcggaccgttgaattatgtcgggtctattgtactttactgtgaaccactaacacctaattcttttatcattttcttcatc 23589229  T
Q  205 ttcatctc 212  Q
    ||||||||    
T  23589230 ttcatctc 23589237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 3528266 - 3528130
Alignment:
Q  21 ttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttatt-ctt 119  Q
    |||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||    
T  3528266 ttagtttttaatagcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccagttgattttttcctt 3528167  T
Q  120 taaaagagaaccgttgaattatgtatggtctattgta 156  Q
    |||||||| ||| |||||||||||| ||| |||||||    
T  3528166 taaaagaggaccattgaattatgtagggtgtattgta 3528130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 14714592 - 14714768
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||  || |||||| ||||||||||  |||||    
T  14714592 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatacgccttattaatttttttaattgcaacca 14714691  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    |||||||| ||||||||||||  |||||||||| |||||  |||||||||| |||   ||  |||||||||||||||    
T  14714692 tttgattttttctttaaaagatgaccgttgaatcatgtagagtctattgtattttactgtgaaccactaacacctaa 14714768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 4512206 - 4512360
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| ||||| |||| |||||||||||||  |||||||||||||||||| ||| ||||| |||||||  || |||||| |||||||||||| ||||    
T  4512206 ttttggtcctctccattagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgccttattaatttttttaattttgacca 4512305  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    |||||||| ||||||||||||  |||||||||| ||||  |||||||| ||||||    
T  4512306 tttgattttttctttaaaagatgaccgttgaatcatgtggggtctattatacttt 4512360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 153
Target Start/End: Complemental strand, 29424628 - 29424481
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||| ||||| |  |||||||||| ||||||| |||||||| |||||||||||| || |||||||| |||||||||||| ||||||||||     
T  29424628 ttttggtcctctctgttagttactaacatcaaatgtctaagatgaaccatgtttaaaggtggtccatcatagaccttattaaatttttaaattttaacct 29424529  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctatt 153  Q
    |||||||| | ||||||||||| |  |||| || ||||| ||||||||    
T  29424528 tttgatttttcctttaaaagaggattgttggatcatgtaaggtctatt 29424481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 7983691 - 7983561
Alignment:
Q  26 ttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaag 125  Q
    ||||||||||||| |||||||||||||||| |||||||||||| ||||||||| | |||||||||||| ||||| | || |||||||| |||||||||||    
T  7983691 ttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagatcttattaaatttttaaatttcatccttttgattttttctttaaaag 7983592  T
Q  126 agaaccgttgaattatgtatggtctattgta 156  Q
    ||    |||| || ||||| |||||||||||    
T  7983591 aggtttgttggatgatgtagggtctattgta 7983561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 21010514 - 21010312
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||| ||||| | ||||||||||| |||||| ||||||| ||||||||||||||  | |||| ||| |||||||||||| ||||||||||     
T  21010514 ttttggtcctctctgttagttgttaacatcaaatgtctaatgtgaaccgtatttaaaggtggtctatcataaaccttattaaatttttaaattttaaccc 21010415  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttca-ttttcttcatc 204  Q
    ||| |||| ||||| |||||| ||  |||| || | ||| ||||||||||| ||| |  |  ||||||||||||||| | |||| ||| |||||||||||    
T  21010414 tttaattttttcttaaaaagataattgttggatcaggtagggtctattgtattttattatgaaccactaacacctaatatttttctcacttttcttcatc 21010315  T
Q  205 ttc 207  Q
    |||    
T  21010314 ttc 21010312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 26205114 - 26205220
Alignment:
Q  7 tttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccat 106  Q
    ||||||| |||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||| |||||||  || |||||| ||||| ||||||||||||    
T  26205114 tttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccaccatatgccttattaattttttaaattttaaccat 26205213  T
Q  107 ttgattt 113  Q
    |||||||    
T  26205214 ttgattt 26205220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 41296470 - 41296349
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| |||||||| |||| |||||| ||||| |||||| ||||||||| |||||| || | || ||||||||||||| ||||||     
T  41296470 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaatcatattaaaaggtggtgcaccatggatcttagtaaattttttaatattaacct 41296371  T
Q  106 tttgatttattctttaaaagag 127  Q
    |||||||| |||||||||||||    
T  41296370 tttgattttttctttaaaagag 41296349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 3532289 - 3532412
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||| |||||||| |||   ||||||||| ||| || |||||||||||||||||||||||||| |||||||  |  || ||||   ||| |||||    
T  3532289 tactattttagtcatctctgttgatttttaacattaaatgtttaaggtgaaccatatttaaaggtggtccaccatatgcattactaaaaaattttatttt 3532388  T
Q  101 aaccatttgatttattctttaaaa 124  Q
    ||||||||||||| ||||||||||    
T  3532389 aaccatttgattttttctttaaaa 3532412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14509304 - 14509414
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| |||||||||  ||||||| | ||| ||||||||| |||||  |||| ||||||| ||||||||||| |||||||  ||||| ||||    
T  14509304 tactattttggtcctctccgttaatttttaaccttaaatgtctaaggtaaaccaactttataggtggtccaccatagaccttattaaaccttttattttt 14509403  T
Q  101 aaccatttgat 111  Q
    |||| ||||||    
T  14509404 aaccgtttgat 14509414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 8537109 - 8537217
Alignment:
Q  3 ctattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaa 102  Q
    |||||||||||||||||||||| ||||||| | ||| ||||||| || ||||  |||  | ||||||||||||||||  |||||||   |||||||||||    
T  8537109 ctattttggtcatctccgttagtttttaaccttaaatgtctaagatgtaccaactttttaagtggttcaccatagactttattaaaaaatttaattttaa 8537208  T
Q  103 ccatttgat 111  Q
    |||||||||    
T  8537209 ccatttgat 8537217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25570891 - 25570790
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||| ||| | |||||||| ||||||  | ||| |||||||||||||||  |||| ||||||| ||||||||||| |||||||| ||||| ||||    
T  25570891 tactattttagtcctttccgttagtttttaaacttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaatattttattttt 25570792  T
Q  101 aa 102  Q
    ||    
T  25570791 aa 25570790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 45047447 - 45047511
Alignment:
Q  11 gtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccat 75  Q
    ||||| |||||||  |||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  45047447 gtcatttccgttaatttttaatatcaaatgtctaaggtgaaccatatttaaaggtggtccaccat 45047511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 35799613 - 35799730
Alignment:
Q  7 tttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccat 106  Q
    ||||||| |||||||||| ||||||| | ||| |||||||||||| ||  |||| | |||||  |||||||||  |||||||| || ||||||||||| |    
T  35799613 tttggtcctctccgttagcttttaaccttaaatgtctaaggtgaatcaactttataagtggtctaccatagactttattaaatgttataattttaaccgt 35799712  T
Q  107 ttgatttattctttaaaa 124  Q
    ||||| | || |||||||    
T  35799713 ttgatcttttttttaaaa 35799730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 4829560 - 4829672
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| |||| |||||  |||||| | |||  |||||||| |||||  |||| ||||||| |||||||||||  || ||  ||| ||||| |    
T  4829560 tactattttggtcctctctgttagtgtttaaccttaaatatctaaggtaaaccaactttataggtggtccaccatagacctcataaatctttctaattct 4829659  T
Q  101 aaccatttgattt 113  Q
    |||||||||||||    
T  4829660 aaccatttgattt 4829672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 10367339 - 10367422
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaat 89  Q
    |||| ||| |||||||| | ||||||| | ||| |||||||||||||||  |||| ||||||| ||| ||||||| ||||||||    
T  10367339 ttttagtcgtctccgtttgtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccacaatagaccttattaaat 10367422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 37869056 - 37868973
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaat 89  Q
    |||||||| |||||||| | ||||||| | ||| ||||||||||| |||  |||| ||||||| ||| ||||||| ||||||||    
T  37869056 ttttggtcttctccgtttgtttttaaccttaaatgtctaaggtgagccaactttataggtggtccacaatagaccttattaaat 37868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 28109886 - 28109780
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||| |||||||||  ||||||| | ||| |||||||||||||||  |||  ||||||| |||||| || | ||| || |  |||||||||||||    
T  28109886 attttggtcctctccgttattttttaaccttaaatgtctaaggtgaaccaactttgtaggtggtccaccatggatcttataaattcatttaattttaacc 28109787  T
Q  105 atttgat 111  Q
     ||||||    
T  28109786 ctttgat 28109780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 34512973 - 34513022
Alignment:
Q  64 gtggttcaccatagaccgtattaaattttttaattttaaccatttgattt 113  Q
    ||||| ||||||| ||| |||||||||||||||||| ||| |||||||||    
T  34512973 gtggtccaccatataccttattaaattttttaatttaaactatttgattt 34513022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 15850678 - 15850571
Alignment:
Q  3 ctattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaa 102  Q
    |||||||||||  || |||||| |||||||   ||| |||||||||||||||   ||| ||||||| ||||||||| | || || | |||||||||||||    
T  15850678 ctattttggtccacttcgttagtttttaaccctaaatgtctaaggtgaaccaacattataggtggtccaccatagatcttaataga-tttttaattttaa 15850580  T
Q  103 ccatttgat 111  Q
    || ||||||    
T  15850579 ccctttgat 15850571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 164; Significance: 8e-88; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 26056168 - 26055957
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26056168 tactattttggtcctctccgttagattttaacatcaaaagtctaaagtgaaccatatttaaaggtggttcaccataggccgtattaaattttttaatttt 26056069  T
Q  101 aaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttctt 200  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||  ||||||||||||||| |||||| ||||||||||    
T  26056068 aaccatttgatttattctttaaaagaggaccgttgaattatgtagggtctattgtactttcctgtgaaccactaacacctaaaacttttatcattttctt 26055969  T
Q  201 catcttcatctc 212  Q
    ||||||| ||||    
T  26055968 catcttcttctc 26055957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 50678463 - 50678663
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  50678463 ttttggtcctctctgttagtttttaacatcaaaactctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaa-tttttaattttaacca 50678561  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttcttcatct 205  Q
    |||||||| ||||||||||||| || |||||||||  || |||||||||||||||   ||  || |||||||||||| | |||||||| |||||||||||    
T  50678562 tttgattttttctttaaaagaggactgttgaattacatagggtctattgtactttactgtgaacgactaacacctaatatttttttcactttcttcatct 50678661  T
Q  206 tc 207  Q
    ||    
T  50678662 tc 50678663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 30551605 - 30551429
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    ||||||||||||||||||| ||||| ||||||| |||||| |||||||||||| ||||||||| |||||| |||| || ||||||||||||||||||||     
T  30551605 ttttggtcatctccgttagtttttagcatcaaatgtctaaagtgaaccatattaaaaggtggtgcaccatggaccttagtaaattttttaattttaacct 30551506  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    |||||||| ||||||||||||| |  |||| || ||||| ||||||||||| |||   ||  |||||||||||||||    
T  30551505 tttgattttttctttaaaagaggattgttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaa 30551429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 37624586 - 37624410
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| ||||||||||||| |||||| |||||||||||| |||||| || |||||| |||| || ||||||||||||||||||||     
T  37624586 ttttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatattaaaaggttgtgcaccatggaccttagtaaattttttaattttaacct 37624487  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    |||||||| ||||||||||||| |  ||||||| ||||| ||||||||||| |||   ||  |||||||||||||||    
T  37624486 tttgattttttctttaaaagaggattgttgaatcatgtagggtctattgtattttagtgtgaaccactaacacctaa 37624410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 8 - 182
Target Start/End: Complemental strand, 51218980 - 51218805
Alignment:
Q  8 ttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatt 107  Q
    |||||| |||||||||| ||||||||||||| |||||| ||||||||||||||||| |||| |||||||  || ||||||||||||||||||||| ||||    
T  51218980 ttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaagatggtccaccatatgccttattaaattttttaattttaatcatt 51218881  T
Q  108 tgattta-ttctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    ||||||| ||| ||||||||| || ||||||| ||||  ||||||||||||||||  ||  |||||| ||||||||    
T  51218880 tgatttatttcattaaaagaggactgttgaatcatgtggggtctattgtactttcctgtgaaccactcacacctaa 51218805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 9633875 - 9634025
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    ||||| || |||||||||| ||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| |||||||||||| |||||| |||     
T  9633875 ttttgatcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaatttttaaattttgaccc 9633974  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgta 156  Q
    |||||||| ||||||| ||||  |  |||| |||||||| ||||| |||||    
T  9633975 tttgattttttctttagaagaagatagttggattatgtagggtcttttgta 9634025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 52742989 - 52742869
Alignment:
Q  9 tggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccattt 108  Q
    ||||| |||||||||| ||||||||||||| || ||||||||||||| |||||||||||| |||||||||||  |||| |||||| |||||||||| |||    
T  52742989 tggtcctctccgttagtttttaacatcaaatgtttaaggtgaaccatgtttaaaggtggtacaccatagacctaattacatttttaaattttaacctttt 52742890  T
Q  109 gatttattctttaaaagagaa 129  Q
    ||||| |||||||||||||||    
T  52742889 gattttttctttaaaagagaa 52742869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 189
Target Start/End: Complemental strand, 23082142 - 23081959
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| | |||||||| |||||||| ||||  ||||| |||||||||||||||||||||| |||||| |||| || |||||||||||||||||||      
T  23082142 ttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccatggaccttaataaattttttaattttaacat 23082043  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacactttt 189  Q
    |||||||| || |||||||| | |  |||| || ||||| ||||||||||| |||   ||  ||||||||||||||| ||||||    
T  23082042 tttgattttttttttaaaagtggattgttggataatgtaaggtctattgtattttagtgtaaaccactaacacctaatactttt 23081959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 27689383 - 27689563
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaa----attttttaatttta 101  Q
    |||||||| |||||||||| |||||||| |||| |||||| |||||||||||||||||||||| || ||| |||| ||||||     |||||||||||||    
T  27689383 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtccatcatggaccttattaatttttttttttaatttta 27689482  T
Q  102 accatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    ||| |||||||| |||||||||||| ||  |||| || ||||| ||||||||||| |||   ||  |||||||||||||||    
T  27689483 accttttgattttttctttaaaagataattgttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaa 27689563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 14764324 - 14764505
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    |||| |||| |||||||| ||||| ||||||||| ||| || ||||||||||| |||||||||||||| |||||||  || || |||||||||| |||||    
T  14764324 tactgttttagtcatctctgttagtttttaacattaaatgtttaaggtgaaccttatttaaaggtggtccaccatacgccatactaaatttttttatttt 14764423  T
Q  101 aaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    ||||||||||||| |||||||||| | |   ||| ||| ||||| ||||||||| |||||   ||  |||||||||||||||    
T  14764424 aaccatttgattttttctttaaaaaatagttgttaaatcatgtagggtctattgcactttactgtgaaccactaacacctaa 14764505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 44977322 - 44977408
Alignment:
Q  7 tttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttt 93  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||||||||    
T  44977322 tttggtcatctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccgtaaaccttattaaattttt 44977408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 22766836 - 22766729
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| | |||||||| |||||||| ||||  ||||| |||||||||||||||||||||| |||||| |||| |  ||||||||||||||||||||     
T  22766836 ttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccatggaccttcataaattttttaattttaacct 22766737  T
Q  106 tttgattt 113  Q
    ||||||||    
T  22766736 tttgattt 22766729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 49141513 - 49141414
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| || | ||||||||||| ||| || |  |||||||||||||    
T  49141513 attttagtcatctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaagttgttccaccatagaccttataaattcatttaattttaacc 49141414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 51726865 - 51726766
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||| ||| || ||||||| ||||||| | ||| |||||||||||||||  |||| ||||||| ||||||||||| |||||||| ||||| ||||    
T  51726865 tactattttagtcctcaccgttagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaatcttttattttt 51726766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 21277089 - 21277188
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    |||||||||| || ||||| |||| |||| || | ||| |||||||||||||||  |||| ||||||| ||||||||||| |||||||| ||||| ||||    
T  21277089 tactattttgatcctctccattagtttttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaatcttttattttt 21277188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 14169714 - 14169807
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatttttt 94  Q
    ||||||||||||| | || ||||| ||||||| | ||| |||||||||||||||  |||| ||||||  ||||||||||| |||| ||| ||||    
T  14169714 tactattttggtcttatctgttagtttttaaccttaaatgtctaaggtgaaccaactttataggtggcccaccatagaccttattgaatctttt 14169807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 8092699 - 8092782
Alignment:
Q  7 tttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatt 90  Q
    ||||||| | ||||||||  |||||| | |||  ||||||||||||||  |||| ||||||| ||||||||||| |||||||||    
T  8092699 tttggtcctttccgttagtatttaaccttaaatatctaaggtgaaccaactttataggtggtccaccatagaccttattaaatt 8092782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 40811403 - 40811457
Alignment:
Q  57 tttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgat 111  Q
    |||| ||||||| ||||||||||| |||||||| ||||| |||||||| ||||||    
T  40811403 tttataggtggtccaccatagaccttattaaatcttttatttttaaccgtttgat 40811457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 51300221 - 51300163
Alignment:
Q  58 ttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttatt 116  Q
    ||||| ||||| ||||||||||| |||||| ||| | ||||||||||||||||| ||||    
T  51300221 ttaaaagtggtccaccatagaccttattaattttatgaattttaaccatttgatatatt 51300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 41872740 - 41872777
Alignment:
Q  67 gttcaccatagaccgtattaaattttttaattttaacc 104  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  41872740 gttcaccatagaccttattaaattttttaatttaaacc 41872777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 42246047 - 42246087
Alignment:
Q  62 aggtggttcaccatagaccgtattaaattttttaattttaac 103  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  42246047 aggtggtttaccatagacc-tattaaattttttaattttaac 42246087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 645 - 438
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||    
T  645 attttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacc 546  T
Q  105 atttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttcttcatc 204  Q
    ||||||||| ||||||||| |||||||||||||||||||  |||||||| ||||||   ||  | || |||||||||| |||||| ||||||||||||||    
T  545 atttgattttttctttaaatgagaaccgttgaattatgtcgggtctattatactttactgtgaatcattaacacctaatacttttatcattttcttcatc 446  T
Q  205 ttcatctc 212  Q
    ||||||||    
T  445 ttcatctc 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 629 - 836
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||    
T  629 attttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacc 728  T
Q  105 atttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttcttcatc 204  Q
    ||||||||| ||||||||| |||||||||||||||||||  |||||||| ||||||   ||  | || |||||||||| |||||| ||||||||||||||    
T  729 atttgattttttctttaaatgagaaccgttgaattatgtcgggtctattatactttactgtgaatcattaacacctaatacttttatcattttcttcatc 828  T
Q  205 ttcatctc 212  Q
    ||||||||    
T  829 ttcatctc 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 2e-60; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 21387737 - 21387937
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| | || ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21387737 ttttggtcctgtctgttagtttttaacatcaaaactctaaggtgaaacatatttaaaggtggttcaccataggccgtattaaattttttaattttaacca 21387836  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttcttcatct 205  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||||||||||||   ||  || |||||||||||| | ||||||||  ||||||||||    
T  21387837 tttgattttttctttaaaagaggaccgttgaattatgtagggtctattgtactttactgtaaacgactaacacctaata-ttttttcacgttcttcatct 21387935  T
Q  206 tc 207  Q
    ||    
T  21387936 tc 21387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 18693798 - 18693951
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||| ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  18693798 ttttggtcctctctgttagtttttaacatcaaaactctaaggtgaaccatatataaaggtggttcaccatagaccgtattaaattttttaattttaatca 18693897  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  18693898 tttgattt-ttctttaaaagaggaccgttgaattatgtatagtctattgtacttt 18693951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 7426761 - 7426862
Alignment:
Q  26 ttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaag 125  Q
    ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||| |||| |||||||| |||||||||||    
T  7426761 ttttaacatcaaatgtctaaggtgaatcatatttaaaggtggtccaccatagaccttattaaatttttaaatttcaaccttttgattttttctttaaaag 7426860  T
Q  126 ag 127  Q
    ||    
T  7426861 ag 7426862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 40058117 - 40058236
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    |||||||||||||||||||| ||||||  | ||| |||||||||||||||  |||| | || || ||||||||||| |||||||| ||||| |||||||     
T  40058117 attttggtcatctccgttagtttttaatcttaaatgtctaaggtgaaccaactttataagtagtccaccatagaccttattaaatcttttatttttaact 40058216  T
Q  105 atttgatttattctttaaaa 124  Q
     |||||| | || |||||||    
T  40058217 gtttgatcttttttttaaaa 40058236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5383037 - 5383131
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatttttta 95  Q
    |||||||||| || |||||||||| ||||||| | ||| |||||||||||| ||  |||| ||||||| ||||||||||| |||||||| |||||    
T  5383037 tactattttgatcctctccgttagtttttaaccttaaatgtctaaggtgaatcaactttataggtggtccaccatagaccttattaaatctttta 5383131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 2167532 - 2167424
Alignment:
Q  4 tattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaac 103  Q
    |||||||||| |||| ||||| ||||||| | ||| |||||||||||||||  |||| || |||| ||||||||||| |||||||| ||||| | |||||    
T  2167532 tattttggtc-tctctgttagtttttaaccttaaatgtctaaggtgaaccaactttatagatggtccaccatagaccttattaaatcttttattattaac 2167434  T
Q  104 catttgattt 113  Q
    | ||||||||    
T  2167433 cgtttgattt 2167424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 30910904 - 30910980
Alignment:
Q  64 gtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaagagaaccgttgaatta 140  Q
    ||||| ||||||||| | |||||| | ||||||||| |||| ||||| || ||||||||||||||||| ||||||||    
T  30910904 gtggtccaccatagatcctattaattattttaatttcaaccgtttgagtttttctttaaaagagaaccattgaatta 30910980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 15856632 - 15856738
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||||| | |||| | |||||||   ||| |||||||||| ||||   ||| ||||||| ||||||||||| || ||| |||||||||||||| |    
T  15856632 attttggtcattttcgtttgtttttaaccctaaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaagttttttaattttaatc 15856731  T
Q  105 atttgat 111  Q
    |||||||    
T  15856732 atttgat 15856738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 7345386 - 7345350
Alignment:
Q  26 ttttaacatcaaaagtctaaggtgaaccatatttaaa 62  Q
    |||||||||||||| ||||||||||||||||||||||    
T  7345386 ttttaacatcaaaactctaaggtgaaccatatttaaa 7345350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 223360 - 223431
Alignment:
Q  40 gtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgat 111  Q
    |||||||||||||||  |||  |||||||  |||||||||  |||||||||||||||||| |||| ||||||    
T  223360 gtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaattttttaatttaaaccgtttgat 223431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32734226 - 32734328
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||||| |||||||| ||||||  | |||  |||||||||||| |  || | || | || ||||||||||| |||||||| ||||| ||||    
T  32734226 tactattttggtcatttccgttagtttttaatcttaaatatctaaggtgaacaaccttaatagatagtccaccatagaccttattaaatcttttattttt 32734325  T
Q  101 aac 103  Q
    |||    
T  32734326 aac 32734328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 19525305 - 19525221
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaat 89  Q
    ||||||||| |||||||| | ||||||| | |||  |||| |||||||||  |||| | ||||| ||||||||||| ||||||||    
T  19525305 attttggtcctctccgtttgtttttaaccttaaatttctatggtgaaccaactttatatgtggtccaccatagaccttattaaat 19525221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 22308754 - 22308694
Alignment:
Q  64 gtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaa 124  Q
    ||||| ||||||||||  |||||||||||||||| | ||||||||||| | || |||||||    
T  22308754 gtggtccaccatagacattattaaattttttaatgtaaaccatttgatctgttttttaaaa 22308694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 24761620 - 24761676
Alignment:
Q  47 gtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaac 103  Q
    ||||||||  |||| ||||||| ||||||| |||||||||||| ||||| |||||||    
T  24761620 gtgaaccaactttataggtggtccaccataaaccgtattaaatcttttatttttaac 24761676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 39917 - 39763
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39917 ttttggtcctctctgttagtttttaacatcaaaagtctaaggtgaatcatatttaaaggtggttcaccatggaccgtattaaattttttaattttaacca 39818  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    |||||||| ||||||||||||  ||| |||||||||||| |||||||||||||||    
T  39817 tttgattttttctttaaaagatgaccattgaattatgtagggtctattgtacttt 39763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 37276257 - 37276110
Alignment:
Q  8 ttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatt 107  Q
    |||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  37276257 ttggtcctctctgttagtttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcactatagaccatattaaattttttaattttaaccatt 37276158  T
Q  108 tgatttattctttaaaagagaaccgttgaattatgtatggtctattgt 155  Q
    |||||| ||||||||||||| ||| ||||||||||||  |||||||||    
T  37276157 tgattttttctttaaaagaggacctttgaattatgtaaagtctattgt 37276110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 13513520 - 13513674
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| ||||||||||||| || |||| ||||||||||||||| ||||| ||||||| ||| |||||| |||||||||||||||||    
T  13513520 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaatttttttaattttaacca 13513619  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    |||||||| |||||||||| || |||||||||| ||||  |||||||||||||||    
T  13513620 tttgattttttctttaaaataggaccgttgaatcatgtgaggtctattgtacttt 13513674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 13603053 - 13603207
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| ||||||||||||| || |||| ||||||||||||||| ||||| ||||||| ||| |||||| |||||||||||||||||    
T  13603053 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaatttttttaattttaacca 13603152  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    |||||||| |||||||||| || |||||||||| ||||  |||||||||||||||    
T  13603153 tttgattttttctttaaaataggaccgttgaatcatgtgaggtctattgtacttt 13603207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 36756159 - 36756309
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||  || |||||||||||| ||||||    
T  36756159 tactattttggtcatctccgttagtttttaacatcaaatttctaaggtgaatcatatttaaaggtggttcaccataagccttattaaatttttaaatttt 36756258  T
Q  101 aaccatttgatttattctttaaaagagaaccgttgaattatgtatggtcta 151  Q
    |||| ||| |||| ||||||||||||||| ||||| || ||||| ||||||    
T  36756259 aaccctttaattttttctttaaaagagaatcgttggatcatgtagggtcta 36756309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 21670164 - 21670318
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| |||||||||||||  |||||||||||||||||| ||| ||||| |||||||  || |||||| |||||||||||||||||    
T  21670164 ttttggtcttctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgccttattaatttttttaattttaacca 21670263  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    |||| ||| ||||||||||||| |||||||||| ||||  |||||||| ||||||    
T  21670264 tttggttttttctttaaaagaggaccgttgaatcatgtggggtctattatacttt 21670318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 13363594 - 13363418
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| |||||||| |||| |||||| |||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||     
T  13363594 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcaccatggaccttagtaaattttttaattttaacct 13363495  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    ||| |||| ||||||||||||| |  |||| || ||||| ||||||||||| |||   ||  |||||||||||||||    
T  13363494 tttaattttttctttaaaagaggattgttggatcatgtagggtctattgtatttttgtgtgaaccactaacacctaa 13363418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 44103312 - 44103134
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaa-attttttaattttaacc 104  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||| |||||||||||| |||||||  || ||||||  ||||||||||||||||    
T  44103312 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatatgccttattaattttttttaattttaacc 44103213  T
Q  105 atttga-tttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    |||||| ||| ||| ||||||||  |||||||||| ||||  ||||||||||||||| | ||  |||||| ||||||||    
T  44103212 atttgatttttttcattaaaagaagaccgttgaatcatgtggggtctattgtactttattgtgaaccactcacacctaa 44103134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 7486172 - 7486383
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||| ||||||||| |||||| || || ||||||||||| |||||||||||| ||||||    
T  7486172 tactattttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatgtttaaatgttgtccaccatagaccttattaaatttttaaatttt 7486271  T
Q  101 aaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttctt 200  Q
    | || |||||||| ||||||||||||| |  |||  || || || | ||||||||| ||| | ||  ||||| ||||||||| | |||| |||  |||||    
T  7486272 agccttttgattttttctttaaaagaggattgttagatcatataagatctattgtattttattgtaaaccaccaacacctaatatttttctcaccttctt 7486371  T
Q  201 catcttcatctc 212  Q
    ||||||| ||||    
T  7486372 catcttcttctc 7486383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 10052204 - 10052354
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||||||||| |||| ||||||||| ||| ||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||| | ||||||||     
T  10052204 ttttggtcatctcctttagtttttaacattaaatgtctaagatgaaccatatttaaaggtggtccaccataaaccttattaaatttttaagttttaaccc 10052303  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgta 156  Q
    |||||||| ||||||||||||  |  |||| || ||||| |||||||||||    
T  10052304 tttgattttttctttaaaagatgattgttggatcatgtagggtctattgta 10052354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 21961923 - 21962041
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| ||||||||||||| |||| ||||||||||| |||||||||||| |||||||  || || |||||||||||||||||||||    
T  21961923 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaaattttttaattttaacca 21962022  T
Q  106 tttgatttattctttaaaa 124  Q
    |||||||| ||||||||||    
T  21962023 tttgattttttctttaaaa 21962041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 26 - 210
Target Start/End: Original strand, 45541604 - 45541783
Alignment:
Q  26 ttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaag 125  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||  ||||||||||||||||||||||| ||||||||| || |||||| |    
T  45541604 ttttaacatcaaaagtctaaagtgaatcatatttaaag-tggttcaccatggaatgtattaaattttttaattttaacaatttgattt-ttttttaaatg 45541701  T
Q  126 agaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttcttcatcttcatc 210  Q
       ||| |||||||||||| |||||||||||||||   ||  |||||||| | |||| | |||| ||| ||||||||||||||||    
T  45541702 ---accattgaattatgtagggtctattgtactttactgtaaaccactaatatctaatatttttctcactttcttcatcttcatc 45541783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 117148 - 117268
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||  ||| |||||||||||| ||||||||||| || |||| |||| ||||||| ||     
T  117148 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgagtcatgtttaaaggtggtccaccatagaccttactaaa-ttttaaattttagcct 117246  T
Q  106 tttgatttattctttaaaagag 127  Q
    |||||||| |||||| ||||||    
T  117247 tttgattttttctttgaaagag 117268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 39546693 - 39546572
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    ||||||||||||||||||| ||||||||||||| || |||| |||||||| |||||||||||| |||||| |||| || ||||    ||||||||||||     
T  39546693 ttttggtcatctccgttagtttttaacatcaaatgtttaagatgaaccatgtttaaaggtggtccaccatggaccttagtaaaaaaattaattttaaccc 39546594  T
Q  106 tttgatttattctttaaaagag 127  Q
    |||||||| || ||||||||||    
T  39546593 tttgattttttttttaaaagag 39546572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13367071 - 13366961
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| |||||||||| ||||||| | ||| |||||||||||||||  |||| ||||||| ||||||||||| |||||||  ||||| ||||    
T  13367071 tactattttggtcctctccgttagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaaccttttattttt 13366972  T
Q  101 aaccatttgat 111  Q
    |||| ||||||    
T  13366971 aaccgtttgat 13366961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 39325850 - 39325729
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||| |||||||| | ||| ||||||||||||| ||||||||||||| || ||||||||||||  | ||||  || || |||||||||||||||||||||    
T  39325850 ttttagtcatctctgctagtttttaacatcaaatgtctaaggtgaactatgtttaaaggtggtctatcatatgccttactaaattttttaattttaacca 39325751  T
Q  106 tttga-tttattctttaaaaga 126  Q
    ||||| ||| ||||||||||||    
T  39325750 tttgatttttttctttaaaaga 39325729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 21267233 - 21267339
Alignment:
Q  7 tttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccat 106  Q
    ||||||| |||||||||| |||||||||||||  ||||||||| |||||  || |||||||| ||||||| |||  ||||||||||| |||||||||| |    
T  21267233 tttggtcctctccgttagtttttaacatcaaatatctaaggtggaccatgattcaaggtggtccaccatatacctaattaaatttttaaattttaacctt 21267332  T
Q  107 ttgattt 113  Q
    |||||||    
T  21267333 ttgattt 21267339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 35944003 - 35944105
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    |||||||||||||||||||||||| ||||||| | ||| |||||||||||||||  |||| ||||| | ||||||||| | |||||||| ||||| ||||    
T  35944003 tactattttggtcatctccgttagtttttaactttaaatgtctaaggtgaaccaactttataggtgatccaccatagatcttattaaatcttttattttt 35944102  T
Q  101 aac 103  Q
    |||    
T  35944103 aac 35944105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36938776 - 36938851
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccata 76  Q
    ||||||||||||| |||| ||||  |||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  36938776 tactattttggtcttctctgttaatttttaacatcaaatatctaaagtgaaccatatttaaaggtggttcaccata 36938851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 44606237 - 44606344
Alignment:
Q  4 tattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaac 103  Q
    ||||||| || ||||| |||| ||||||| | ||| |||||||||||||||  |||| ||||||| ||||||||||| | |||||| ||||| |||||||    
T  44606237 tattttgatcctctccattagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttgttaaatcttttatttttaac 44606336  T
Q  104 catttgat 111  Q
    | ||||||    
T  44606337 cgtttgat 44606344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 2421311 - 2421191
Alignment:
Q  4 tattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaac 103  Q
    |||||||||| |||  ||||| ||||||| | ||| |||||||||||||||  |||| || |||| || |||||||| |||||||| ||||| |||||||    
T  2421311 tattttggtcctctttgttagtttttaaccttaaatgtctaaggtgaaccaactttatagatggtccatcatagaccttattaaatcttttatttttaac 2421212  T
Q  104 catttgat-ttattctttaaa 123  Q
    | |||||| || |||||||||    
T  2421211 cgtttgatctttttctttaaa 2421191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 8095441 - 8095553
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| | |||||||| ||||||  | ||| |||||||||||||||  |||| ||||| | ||||||| ||| |||||||| || ||  |||    
T  8095441 tactattttggtcctttccgttagtttttaatcttaaatgtctaaggtgaaccaactttataggtgatgcaccatataccttattaaatcttgtatcttt 8095540  T
Q  101 aaccatttgattt 113  Q
    |||||||||||||    
T  8095541 aaccatttgattt 8095553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36070273 - 36070372
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| || |||||||  ||| || | ||| |||||||||||||||  |||| ||||||| ||||||||||| |||||||| ||||| ||||    
T  36070273 tactattttggtcctccccgttagtctttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaatattttattttt 36070372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 24069463 - 24069357
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||| | |||||  | ||||||||  ||| |||||||||| ||||   ||| ||||||| ||||||||||| || ||| ||||||||||||||||    
T  24069463 attttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaagttttttaattttaacc 24069364  T
Q  105 atttgat 111  Q
    |||||||    
T  24069363 atttgat 24069357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 34617212 - 34617106
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||||| ||||| || |||||||   ||| || ||||||| ||||   ||| ||||||| |||| |||||| || ||||||||||||||||||||    
T  34617212 attttggtcatttccgtcagtttttaaccctaaatgtataaggtggaccaacattacaggtggtccaccgtagaccttactaaattttttaattttaacc 34617113  T
Q  105 atttgat 111  Q
    |||||||    
T  34617112 atttgat 34617106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 7770915 - 7770809
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||||| | |||  | ||||||||  ||| |||||||||| ||||   ||| ||||||| | ||||||||| || ||| ||||||||||||||||    
T  7770915 attttggtcattttcgtctgtttttaacactaaatgtctaaggtggaccaacattataggtggtcctccatagaccttactaagttttttaattttaacc 7770816  T
Q  105 atttgat 111  Q
    |||||||    
T  7770815 atttgat 7770809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 7796825 - 7796719
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||||| | |||  | ||||||||  ||| |||||||||| ||||   ||| ||||||| | ||||||||| || ||| ||||||||||||||||    
T  7796825 attttggtcattttcgtctgtttttaacactaaatgtctaaggtggaccaacattataggtggtcctccatagaccttactaagttttttaattttaacc 7796726  T
Q  105 atttgat 111  Q
    |||||||    
T  7796725 atttgat 7796719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 7816106 - 7816000
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||||| | |||  | ||||||||  ||| |||||||||| ||||   ||| ||||||| | ||||||||| || ||| ||||||||||||||||    
T  7816106 attttggtcattttcgtctgtttttaacactaaatgtctaaggtggaccaacattataggtggtcctccatagaccttactaagttttttaattttaacc 7816007  T
Q  105 atttgat 111  Q
    |||||||    
T  7816006 atttgat 7816000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20308700 - 20308801
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||||| ||| |||  ||||||| | ||| |||||||||||||||  |||| || | || | ||||||||| |||||||| ||||| ||||    
T  20308700 tactattttggtcatttccattaatttttaaccttaaatgtctaaggtgaaccaactttatagatagtccgccatagaccttattaaatcttttattttt 20308799  T
Q  101 aa 102  Q
    ||    
T  20308800 aa 20308801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 21095333 - 21095434
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||||| ||| |||  ||||||| | ||| |||||||||||||||  |||| || | || | ||||||||| |||||||| ||||| ||||    
T  21095333 tactattttggtcatttccattaatttttaaccttaaatgtctaaggtgaaccaactttatagatagtccgccatagaccttattaaatcttttattttt 21095432  T
Q  101 aa 102  Q
    ||    
T  21095433 aa 21095434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 19913591 - 19913675
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaat 89  Q
    ||||||||| |||||||||| ||||||| | |||  ||||||||||||||  |||| || |||| ||||||||||  ||||||||    
T  19913591 attttggtcctctccgttagtttttaaccttaaatttctaaggtgaaccaactttatagatggtccaccatagactttattaaat 19913675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 6397943 - 6397990
Alignment:
Q  64 gtggttcaccatagaccgtattaaattttttaattttaaccatttgat 111  Q
    ||||| ||||||||||| |||||| ||||||||||| |||||||||||    
T  6397943 gtggtccaccatagaccttattaatttttttaatttaaaccatttgat 6397990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16363833 - 16363780
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaacca 54  Q
    ||||||||||||| |||||||||| | ||||| | ||| |||||||||||||||    
T  16363833 tactattttggtcctctccgttagttattaactttaaatgtctaaggtgaacca 16363780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 39515319 - 39515404
Alignment:
Q  26 ttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgat 111  Q
    ||||||||  ||| |||||||||| ||||   ||| ||||||| || |||||||| || ||| |||| ||||||||||||||||||    
T  39515319 ttttaacactaaatgtctaaggtggaccaacattataggtggtccatcatagaccttactaagttttataattttaaccatttgat 39515404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 41629839 - 41629920
Alignment:
Q  35 caaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttatt 116  Q
    |||||||||| |||||||||   ||||| |||||||| | || ||| |||||| ||| |||||||||||||||  |||||||    
T  41629839 caaaagtctatggtgaaccaaccttaaaagtggttcatcgtataccttattaattttgttaattttaaccattcaatttatt 41629920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 12281796 - 12281716
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtatta 86  Q
    ||||| || |||||||||| |||||||||||||  ||||| ||| |||||  || |||||||| ||||||| ||| |||||    
T  12281796 ttttgatcctctccgttagtttttaacatcaaatatctaatgtggaccatgattcaaggtggtccaccatataccttatta 12281716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 5e-49; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 44302820 - 44302958
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44302820 ttttggtcctctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 44302919  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgta 144  Q
    ||||||| |||||||||||||  |  |||||||||||||    
T  44302920 tttgattgattctttaaaagatgattgttgaattatgta 44302958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 29687994 - 29687818
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||||||||| |||| ||||||||||||| ||||| || |||||||||||||||||||| |||| || ||| |||||||||||| | |||||||||    
T  29687994 ttttggtcatctcctttagtttttaacatcaaatgtctacggcgaaccatatttaaaggtggtccaccgtaaaccttattaaatttttaagttttaacca 29687895  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    |||||||| |||||||||||||||  |||| || ||||| ||||||||||| ||| | ||  ||||||| |||||||    
T  29687894 tttgattttttctttaaaagagaattgttggatcatgtaaggtctattgtattttattgtgaaccactaccacctaa 29687818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 43894205 - 43894381
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||||| |||||| | ||||||||||||| |||| ||||||||||||||||||| |||| ||| |||  || |||||||||||||||| |||||||    
T  43894205 ttttggtcatatccgttggtttttaacatcaaatgtctgaggtgaaccatatttaaagatggtccacaatatgccctattaaattttttaatcttaacca 43894304  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    |||||||| |||||||||||||  | |||||||| |||| |||||||||||||||   ||| |||||||||| ||||    
T  43894305 tttgattttttctttaaaagagggctgttgaattttgtagggtctattgtactttagtgtcaaccactaacatctaa 43894381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 160
Target Start/End: Complemental strand, 2293539 - 2293386
Alignment:
Q  8 ttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatt 107  Q
    |||||| |||||||||| |||||| |||||| |||| | ||||| ||||||||||| |||| |||||||  || ||||||||||||||||||||||||||    
T  2293539 ttggtcctctccgttagtttttaaaatcaaatgtctgaagtgaatcatatttaaagatggtccaccatatgccttattaaattttttaattttaaccatt 2293440  T
Q  108 tgattta-ttctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    ||||||| ||| ||||||||| |||||||||| ||||  |||||||||||||||    
T  2293439 tgatttatttcattaaaagaggaccgttgaatcatgtggggtctattgtacttt 2293386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 11094621 - 11094831
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    |||| |||||||| ||| |||||| ||||||||||||| |||||||||  ||||| |||||| ||||||||||||||||| |||||||||||| ||| ||    
T  11094621 tactgttttggtcctcttcgttagtttttaacatcaaatgtctaaggt--accatgtttaaatgtggttcaccatagaccttattaaatttttaaatatt 11094718  T
Q  101 aaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttca-ttttct 199  Q
    |||| | |||||| ||||||||||||| |  |||| || ||||| ||||||||||| ||| | ||  ||||| ||||||||| | |||| |||  |||||    
T  11094719 aaccttgtgattttttctttaaaagaggattgttggatcatgtaaggtctattgtattttattgtaaaccaccaacacctaatatttttctcacctttct 11094818  T
Q  200 tcatcttcatctc 212  Q
    |||||||| ||||    
T  11094819 tcatcttcttctc 11094831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 38419038 - 38418879
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    |||| |||| |||||||||||||| ||||||||| ||| || |||| ||||||||||||| ||||||| |||||||  || || |||||||||| |||||    
T  38419038 tactgttttagtcatctccgttagtttttaacattaaacgtttaagatgaaccatatttataggtggtccaccatatgccttactaaatttttttatttt 38418939  T
Q  101 aaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    ||||||||||||| |||||||||| | | | ||| ||| ||||| |||||||||||||||    
T  38418938 aaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgtacttt 38418879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 36604857 - 36604702
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatttttt-aattttaacc 104  Q
    |||||||| |||||||||| |||||| ||||||  |||||| ||||||||||| ||| ||||  |||||||  || |||||| |||||| ||||||||||    
T  36604857 ttttggtcctctccgttagtttttaatatcaaatatctaagatgaaccatattaaaaagtggcccaccatatgccttattaattttttttaattttaacc 36604758  T
Q  105 atttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    ||||||||| ||||||||||||| ||| |||||| ||||  |||||||| ||||||    
T  36604757 atttgattttttctttaaaagaggaccattgaatcatgtggggtctattatacttt 36604702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 39592310 - 39592184
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    |||| |||||||  |||||||||  ||||||||||||| ||||||||||| |||| |||||||||||| || |||| ||| |||||||||||| ||||||    
T  39592310 tactgttttggttctctccgttaatttttaacatcaaatgtctaaggtgagccatgtttaaaggtggtccatcatataccttattaaatttttaaatttt 39592211  T
Q  101 aaccatttgatttattctttaaaagag 127  Q
    |||| |||||||| |||| ||||||||    
T  39592210 aaccttttgattttttctataaaagag 39592184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 35787896 - 35788016
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| ||||||||||||| ||||||||| || ||| |||||||||||| ||||||||||  |||||||||||| ||||||||||     
T  35787896 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtaaatcatgtttaaaggtggtccaccatagactttattaaatttttaaattttaacct 35787995  T
Q  106 tttgatttattctttaaaaga 126  Q
    ||| | || ||| ||||||||    
T  35787996 tttaaatttttcattaaaaga 35788016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 6616227 - 6616105
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| ||||| |||| ||||||||||||| ||| ||||||||| ||  |||||| | || ||| ||||||| |||||||||||| ||||||||||     
T  6616227 ttttggtcctctcctttagtttttaacatcaaatgtcaaaggtgaacaatgattaaagatagtccactatagaccttattaaatttttaaattttaacct 6616128  T
Q  106 tttgattta-ttctttaaaagag 127  Q
    ||||||||| |||||||||||||    
T  6616127 tttgatttatttctttaaaagag 6616105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 50530598 - 50530700
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||||| || ||||  ||||||| | |||||||||||||||||||  |||| |||| || ||||||||||| |||||||||||||| ||||    
T  50530598 tactattttggtcatttctgttaatttttaaccttaaaagtctaaggtgaaccaactttataggtagtccaccatagaccttattaaattttttattttt 50530697  T
Q  101 aac 103  Q
    |||    
T  50530698 aac 50530700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 86898 - 86970
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcacc 73  Q
    |||| |||||||| |||||||||| ||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  86898 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 86970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6140381 - 6140279
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||||| |||||||| ||||||| | |||  ||||||||||||||  |||| |||| || ||||||||||| |||||||| ||||| ||||    
T  6140381 tactattttggtcatttccgttagtttttaaccttaaatatctaaggtgaaccaactttataggtagtccaccatagaccttattaaatcttttattttt 6140282  T
Q  101 aac 103  Q
    |||    
T  6140281 aac 6140279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 26393123 - 26393038
Alignment:
Q  26 ttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgat 111  Q
    ||||||||  ||| |||||||||||||||   ||| ||||||| ||||||||||| || ||| |||||||||||||||||||||||    
T  26393123 ttttaacactaaatgtctaaggtgaaccaacattataggtggtccaccatagaccttactaagttttttaattttaaccatttgat 26393038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 36604646 - 36604586
Alignment:
Q  83 attaaattttttaattttaaccatttgatttattctttaaaagagaaccgttgaattatgt 143  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||| ||||    
T  36604646 attaatttttttaattttaaccatttgattttttcgttaaaagaggaccgttgaatcatgt 36604586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 38555289 - 38555187
Alignment:
Q  9 tggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccattt 108  Q
    ||||||| |||||||| ||||||  | ||| |||||||||||||||  |||  |||||||  |||||||||  |||||||||||||||||| |||| |||    
T  38555289 tggtcatttccgttagtttttaatcttaaatgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaattttttaatttaaaccgttt 38555190  T
Q  109 gat 111  Q
    |||    
T  38555189 gat 38555187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 47668613 - 47668527
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatttt 92  Q
    |||||||| |||| ||||| |||||||||||||  |||||||| ||||||  |||||| |||| ||||||||||| | |||||||||    
T  47668613 ttttggtcctctctgttagtttttaacatcaaatatctaaggtaaaccatggttaaagatggtccaccatagacctttttaaatttt 47668527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 52980150 - 52980260
Alignment:
Q  72 ccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctacca 171  Q
    ||||| ||| |||||||||||| |||||||||| ||| |||| ||||||||||||| |  |||| ||||||||  |||||||||| ||| | ||  ||||    
T  52980150 ccatataccttattaaatttttaaattttaaccttttaattttttctttaaaagaggattgttggattatgtagagtctattgtattttattgtaaacca 52980249  T
Q  172 ctaacacctaa 182  Q
    | |||||||||    
T  52980250 ccaacacctaa 52980260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 7707751 - 7707827
Alignment:
Q  64 gtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaagagaaccgttgaatta 140  Q
    ||||| ||||||||| | |||||| | ||||||||| |||| |||||||| ||||||||||||||||| ||| ||||    
T  7707751 gtggtccaccatagatcctattaattattttaatttcaaccgtttgattttttctttaaaagagaaccattggatta 7707827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 38370381 - 38370501
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaa-gtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaac 103  Q
    |||||||||||||||||||| ||||||| | |||| | |||||||||||||  |||  ||||||| ||||||||| | ||| || |  ||||||||||||    
T  38370381 attttggtcatctccgttagtttttaaccttaaaatgactaaggtgaaccaactttgtaggtggtccaccatagatcttataaattcatttaattttaac 38370480  T
Q  104 catttgatttattctttaaaa 124  Q
    | |||||| | || |||||||    
T  38370481 cctttgatattttttttaaaa 38370501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 17319137 - 17319240
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| || ||||||| ||||||| | ||| |||||||||||||||  ||   |||||||  | |||| ||  |||||||||||||||||||    
T  17319137 tactattttggtcttcaccgttagtttttaaccttaaatgtctaaggtgaaccaacttcttaggtggtctatcataaactttattaaattttttaatttt 17319236  T
Q  101 aacc 104  Q
    ||||    
T  17319237 aacc 17319240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 3533625 - 3533519
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||| | ||||| || ||||||||  ||| |||||||||  ||||   ||| ||| ||| ||||||||||| || ||| ||||||||||||||||    
T  3533625 attttggtcctttccgtcagtttttaacactaaatgtctaaggtcgaccaacattataggcggtccaccatagaccttactaagttttttaattttaacc 3533526  T
Q  105 atttgat 111  Q
    |||||||    
T  3533525 atttgat 3533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 11114997 - 11114899
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaac 103  Q
    ||||||| | |||||||||| ||||||| | ||| ||||||| |||||||  |||  |||||||  |||||||||  |||||||| |||||||||||||    
T  11114997 attttggacctctccgttagtttttaaccttaaatgtctaagctgaaccaactttgtaggtggtctaccatagactttattaaatgttttaattttaac 11114899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 29663761 - 29663847
Alignment:
Q  25 attttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgat 111  Q
    |||||||||| ||| |||||||||||||||   ||| ||||||| ||||||| ||| || |||  |||||||||||||||| |||||    
T  29663761 attttaacattaaatgtctaaggtgaaccaacattataggtggtccaccataaaccttactaagatttttaattttaaccacttgat 29663847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 56000386 - 56000492
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||| | ||| | || ||||||||  ||| |||||||||| ||||   ||| ||||||| |||| |||||| || ||| ||||||||||||||||    
T  56000386 attttggtcttttccatcagtttttaacactaaatgtctaaggtggaccaacattataggtggtccaccgtagaccttactaagttttttaattttaacc 56000485  T
Q  105 atttgat 111  Q
    |||||||    
T  56000486 atttgat 56000492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 1794574 - 1794634
Alignment:
Q  64 gtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaa 124  Q
    ||||| ||||||||||| |||||||||||||||||| |||| ||||||  ||| |||||||    
T  1794574 gtggtccaccatagaccttattaaattttttaatttaaaccgtttgatcaattttttaaaa 1794634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 17494222 - 17494329
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    |||||| ||||| ||||||||||  ||||||| | ||| |||||| ||||| ||   ||||| || || ||||||||||| |||||| ||| | ||||||    
T  17494222 tactatattggttatctccgttactttttaaccttaaatgtctaacgtgaaacaacgttaaaagtagtccaccatagaccttattaattttatgaatttt 17494321  T
Q  101 aaccattt 108  Q
    ||||||||    
T  17494322 aaccattt 17494329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 56296292 - 56296398
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    |||||||| || |||||| | |||||||   ||| |||||||||| ||||   | | |||||||  |||||||||| || ||| ||||||||||||||||    
T  56296292 attttggtaatttccgtttgtttttaaccctaaatgtctaaggtggaccaacatcataggtggtctaccatagaccttactaagttttttaattttaacc 56296391  T
Q  105 atttgat 111  Q
    |||||||    
T  56296392 atttgat 56296398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 13220 - 13044
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| | ||| |||| ||||||||||||| |||||||||||||||||||||||| |||| ||||||| ||| || |||| |||||||| |||||||    
T  13220 ttttggtcctatccattaggttttaacatcaaatgtctaaggtgaaccatatttaaagatggtccaccatataccctactaaaatttttaatcttaacca 13121  T
Q  106 tttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    |||||||| ||||||||||||| || |||||||| |||| ||||||||||||||| | ||| |||||||||| ||||    
T  13120 tttgattttttctttaaaagaggactgttgaattttgtagggtctattgtactttattgtcaaccactaacatctaa 13044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 41017 - 41184
Alignment:
Q  15 tctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgattta 114  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||  || || |||||||||| ||||||||||||||||||     
T  41017 tctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaatttttttattttaaccatttgatttt 41116  T
Q  115 ttctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaa 182  Q
    || ||||||||| ||||||||||| ||||| | | |||||||||||   ||  |||||||||||||||    
T  41117 ttttttaaaagataaccgttgaatcatgtaggatttattgtactttactgtgaaccactaacacctaa 41184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 9495 - 9379
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||    
T  9495 attttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacc 9396  T
Q  105 atttgatttattcttta 121  Q
    ||||||||| |||||||    
T  9395 atttgattttttcttta 9379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 24495066 - 24494911
Alignment:
Q  7 tttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccat 106  Q
    ||||||| |||||||||| ||||||||||||| |||||| |||||||||||||||| ||||| |||||||  || |||||| ||||||||||||||||||    
T  24495066 tttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaaagtggtccaccatatgccttattaatttttttaattttaaccat 24494967  T
Q  107 ttgatttatt--ctttaaaagagaaccgttgaattatgtatggtctattgtacttt 160  Q
    ||||||| ||  |||||||||| ||||||||||| ||||   ||||||||||||||    
T  24494966 ttgatttttttcctttaaaagataaccgttgaatcatgtggcgtctattgtacttt 24494911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 14109087 - 14108966
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||| ||| |||||||||| ||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| ||||||| |||| ||||||||||     
T  14109087 ttttagtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaaattttaaattttaacct 14108988  T
Q  106 tttgatttattctttaaaagag 127  Q
    ||| |||| |||||||||||||    
T  14108987 tttaattttttctttaaaagag 14108966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 14419044 - 14418923
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||| ||| |||||||||| ||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| ||||||| |||| ||||||||||     
T  14419044 ttttagtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaaattttaaattttaacct 14418945  T
Q  106 tttgatttattctttaaaagag 127  Q
    ||| |||| |||||||||||||    
T  14418944 tttaattttttctttaaaagag 14418923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 4167571 - 4167672
Alignment:
Q  26 ttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaag 125  Q
    |||||||||||||  ||||||||||||||| |||||||||||| ||||||||| | |||||||||||| ||||| |||| |||||||| |||||||||||    
T  4167571 ttttaacatcaaatttctaaggtgaaccatgtttaaaggtggtccaccatagatcttattaaatttttaaatttcaaccttttgattttttctttaaaag 4167670  T
Q  126 ag 127  Q
    ||    
T  4167671 ag 4167672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 38406113 - 38406238
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    |||| |||||||| | |||||||  ||||||||||||| |||||||||||||||||||||||||| || || |||||||| |||||||||||| |||||     
T  38406113 tactgttttggtcctttccgttaatttttaacatcaaatgtctaaggtgaaccatatttaaaggtagtcca-catagaccttattaaatttttaaatttc 38406211  T
Q  101 aaccatttgatttattctttaaaagag 127  Q
    |||| ||| |||| || ||||||||||    
T  38406212 aaccttttaattttttgtttaaaagag 38406238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 35315199 - 35315099
Alignment:
Q  60 aaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactt 159  Q
    ||||||||| |||||||  || || |||||||||| ||||||||||||| |||| |||||||||||| ||  ||||||| ||||| ||||| ||||||||    
T  35315199 aaaggtggtccaccatatgccttactaaatttttttattttaaccattttattttttctttaaaagataattgttgaatcatgtagggtcttttgtactt 35315100  T
Q  160 t 160  Q
    |    
T  35315099 t 35315099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 25154953 - 25154847
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    |||||||||||||||||| | ||||||| | ||| |||||||||||||||  |||| | ||||| ||||||| | | |||||||| ||||| ||||||||    
T  25154953 attttggtcatctccgtttgtttttaaccttaaatgtctaaggtgaaccaactttataagtggtccaccataaaacttattaaatcttttatttttaacc 25154854  T
Q  105 atttgat 111  Q
     ||||||    
T  25154853 gtttgat 25154847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 132009 - 131898
Alignment:
Q  12 tcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgat 111  Q
    ||||||||||||| ||||||| | ||| |||||||||||||||  |||  | ||||   |||||| ||  ||||||||||||||||||||||| ||||||    
T  132009 tcatctccgttagtttttaaccttaaatgtctaaggtgaaccaactttgtaagtggactaccataaactttattaaattttttaattttaaccgtttgat 131910  T
Q  112 ttattctttaaa 123  Q
     | |||||||||    
T  131909 cttttctttaaa 131898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 19848830 - 19848700
Alignment:
Q  26 ttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaag 125  Q
    |||||||| ||||  ||||||||||||||||||| |||||| | |||||| |||| || ||||   ||||||| ||||| |||||||| || ||||||||    
T  19848830 ttttaacagcaaatctctaaggtgaaccatatttcaaggtgatccaccatggaccttagtaaaaaatttaattgtaaccctttgattttttgtttaaaag 19848731  T
Q  126 agaaccgttgaattatgtatggtctattgta 156  Q
    || |  |||| || |||||  ||||||||||    
T  19848730 aggattgttggatcatgtagagtctattgta 19848700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 26406224 - 26406354
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    |||||||||||||||||||  ||||||| | ||| |||||||||||||||  |||  ||||||| |||||||||   ||| || |  |||||||||||||    
T  26406224 attttggtcatctccgttattttttaaccttaaatgtctaaggtgaaccaactttgtaggtggtccaccatagatattataaattcatttaattttaacc 26406323  T
Q  105 atttgatttattctttaaaagagaaccgttg 135  Q
     |||||| | || |  |||||||||||||||    
T  26406324 ctttgatattttttaaaaaagagaaccgttg 26406354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 10256243 - 10256320
Alignment:
Q  26 ttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaac 103  Q
    ||||||| | |||||||||||||||||||  |||| |||| || ||||||||||| |||||||| ||||| |||||||    
T  10256243 ttttaaccttaaaagtctaaggtgaaccaactttataggtagtccaccatagaccttattaaatcttttatttttaac 10256320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 46458730 - 46458646
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaat 89  Q
    ||||||||| |||||||| | ||||||| | ||| |||||||||||||||  |||| |||| || ||||||||||| ||||||||    
T  46458730 attttggtcctctccgtttgtttttaaccttaaatgtctaaggtgaaccaactttataggtagtccaccatagaccttattaaat 46458646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 18801335 - 18801465
Alignment:
Q  26 ttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaag 125  Q
    |||||||| ||||  ||||||||||||||||||| |||||| | |||||| |||| || ||||   ||||||| ||||| ||| |||| || ||||||||    
T  18801335 ttttaacagcaaatctctaaggtgaaccatatttcaaggtgatccaccatggaccttagtaaaaaatttaattgtaaccctttaattttttgtttaaaag 18801434  T
Q  126 agaaccgttgaattatgtatggtctattgta 156  Q
    || |  |||| || |||||  ||||||||||    
T  18801435 aggattgttggatcatgtagagtctattgta 18801465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4857296 - 4857347
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaac 52  Q
    |||| |||| ||| |||||||||| ||||||||||||| |||||||||||||    
T  4857296 tactgttttagtcctctccgttagtttttaacatcaaatgtctaaggtgaac 4857347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 35484329 - 35484222
Alignment:
Q  3 ctattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaa 102  Q
    |||||||||||  || |||||| |||||||   ||| |||||||||||||||   ||| ||||||| ||||||||| | || || | |||||||||||||    
T  35484329 ctattttggtccacttcgttagtttttaaccctaaatgtctaaggtgaaccaacattataggtggtccaccatagatcttaataga-tttttaattttaa 35484231  T
Q  103 ccatttgat 111  Q
    || ||||||    
T  35484230 ccctttgat 35484222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 207814 - 207696
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacca 105  Q
    |||||||| |||||||||| ||||||||||||| |||| ||||||||||| |||||||||||| |||||||  || || |||||||||||||||||||||    
T  207814 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaaattttttaattttaacca 207715  T
Q  106 tttgatttattctttaaaa 124  Q
    |||||||| ||||||||||    
T  207714 tttgattttttctttaaaa 207696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 18139503 - 18139352
Alignment:
Q  6 ttttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc- 104  Q
    |||||||| ||||| |||| ||||||||||||| |||||||||||||||| ||||||| || | ||||||||||  |||||||||||| ||||||||||     
T  18139503 ttttggtcctctccattagtttttaacatcaaatgtctaaggtgaaccatgtttaaagatgatccaccatagacattattaaatttttaaattttaacct 18139404  T
Q  105 atttgatttattctttaaaagagaaccgttgaattatgtatggtctattgta 156  Q
     |||||||| ||||||||||||| |  |||| || ||||| |||||||||||    
T  18139403 ttttgattttttctttaaaagaggattgttggatcatgtagggtctattgta 18139352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 34084154 - 34084045
Alignment:
Q  102 accatttgatttattctttaaaagagaaccgttgaattatgtatggtctattgtactttctagtctaccactaacacctaacacttttttcattttcttc 201  Q
    |||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||   ||  ||||||||||||||| |||||| |||||||||||    
T  34084154 accatttgattttttctttaaatgaggaccgttgaattatgtagggtctattgtactttactgtgaaccactaacacctaatacttttatcattttcttc 34084055  T
Q  202 atcttcatct 211  Q
    ||||||||||    
T  34084054 atcttcatct 34084045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 33802031 - 33801884
Alignment:
Q  8 ttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatt 107  Q
    |||||| |||||||||| |||||||||||||  ||||||||  |||||  || |||||||| ||||||| ||| |||||||||||| |||||||| | ||    
T  33802031 ttggtcctctccgttagtttttaacatcaaatatctaaggtagaccatgattcaaggtggtccaccatataccttattaaatttttaaattttaa-cttt 33801933  T
Q  108 tga-tttattctttaaaagagaaccgttgaattatgtatggtctattgt 155  Q
    ||| ||| ||||||||||||| |  |||| || ||||| ||||||||||    
T  33801932 tgatttttttctttaaaagaggattgttggatcatgtagggtctattgt 33801884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14328795 - 14328707
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaat 89  Q
    ||||||||||||| |||||||||  ||||||| | ||| |||||||||||||||  |||| ||||||| ||||||||||| ||||||||    
T  14328795 tactattttggtcctctccgttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaat 14328707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14421805 - 14421717
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaat 89  Q
    ||||||||||||| |||||||||  ||||||| | ||| |||||||||||||||  |||| ||||||| ||||||||||| ||||||||    
T  14421805 tactattttggtcctctccgttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaat 14421717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 13507182 - 13507068
Alignment:
Q  11 gtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttga 110  Q
    |||||||| ||||| ||||||||||||| || |||||||||||||||||||||||||| || ||| | |  || ||||   | ||||||||||| |||||    
T  13507182 gtcatctctgttagtttttaacatcaaatgtttaaggtgaaccatatttaaaggtggtcca-catgggctttaataaaacctctaattttaaccctttga 13507084  T
Q  111 tttattctttaaaaga 126  Q
    ||| ||||||||||||    
T  13507083 ttttttctttaaaaga 13507068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 293657 - 293551
Alignment:
Q  5 attttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaacc 104  Q
    ||||||||| ||||||||   ||||||| | ||| |||||||||||||||  |||| ||||||| ||||||||||| ||||||||    || ||||||||    
T  293657 attttggtcctctccgtttatttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaataacatatttttaacc 293558  T
Q  105 atttgat 111  Q
    |||||||    
T  293557 atttgat 293551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 27440196 - 27440086
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| |||||||||  ||||||| | ||| ||||||||||||  |  |||  |||||||  |||||| ||  |||||||||||||||||||    
T  27440196 tactattttggtcctctccgttaatttttaactttaaatgtctaaggtgaattaactttgtaggtggtctaccataaactttattaaattttttaatttt 27440097  T
Q  101 aaccatttgat 111  Q
    |||| ||||||    
T  27440096 aaccgtttgat 27440086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 2130878 - 2130990
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| ||||| ||||  |||||| | |||  ||||||||||||||  |||| ||||||||||||||||| |  || ||  ||| ||||| |    
T  2130878 tactattttggtcctctcccttagtatttaaccttaaatatctaaggtgaaccacctttataggtggttcaccatagatctcataaatctttctaattct 2130977  T
Q  101 aaccatttgattt 113  Q
    |||||||||||||    
T  2130978 aaccatttgattt 2130990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9927700 - 9927802
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    |||||||||||||||||||||||  ||||||| | ||| ||||||| |||||||  |||  |||||||  |||| ||||  ||||| |||||||||||||    
T  9927700 tactattttggtcatctccgttaatttttaaccttaaatgtctaagatgaaccaactttgtaggtggtctacca-agactttattacattttttaatttt 9927798  T
Q  101 aacc 104  Q
    ||||    
T  9927799 aacc 9927802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 16268706 - 16268755
Alignment:
Q  71 accatagaccgtattaaattttttaattttaaccatttgatttattcttt 120  Q
    |||||||||  |||||||||||||||||||| || |||||||| ||||||    
T  16268706 accatagactttattaaattttttaattttatccgtttgattttttcttt 16268755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16040 - 16150
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||| ||| |||||||||| ||||||| | ||| ||||||| |||||||  |||| || |||| ||||||||||| |||||||  ||||| ||||    
T  16040 tactattttagtcctctccgttagtttttaaccttaaatgtctaagatgaaccaactttatagatggtccaccatagaccttattaaaccttttattttt 16139  T
Q  101 aaccatttgat 111  Q
    |||| ||||||    
T  16140 aaccgtttgat 16150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 56701 - 56595
Alignment:
Q  21 ttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttga-tttattctt 119  Q
    |||| |||||||||||||  |||||||  ||| || ||||||| |||| ||||| ||||| |||||||||||| |||||||||| ||||| ||| |||||    
T  56701 ttagtttttaacatcaaatatctaagggaaactatgtttaaagatggtccaccaaagaccttattaaatttttaaattttaaccttttgatttttttctt 56602  T
Q  120 taaaaga 126  Q
    |||||||    
T  56601 taaaaga 56595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 77202 - 77090
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagt--ctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatt 98  Q
    |||| |||||||| |||||||||   ||| |||||||| ||  ||||||||||||||||||||||||||| |||||| |||| ||| |  |  |||||||    
T  77202 tactgttttggtcttctccgttaatgtttgacatcaaatgtgtctaaggtgaaccatatttaaaggtggtccaccattgaccttataagttcatttaatt 77103  T
Q  99 ttaaccatttgat 111  Q
    |||||||||||||    
T  77102 ttaaccatttgat 77090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 47165 - 47275
Alignment:
Q  1 tactattttggtcatctccgttagattttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaatttt 100  Q
    ||||||||||||| |||||||||  ||||||| | ||| ||||||||||||  |  |||  |||||||  |||||| ||  |||||||||||||||||||    
T  47165 tactattttggtcctctccgttaatttttaactttaaatgtctaaggtgaattaactttgtaggtggtctaccataaactttattaaattttttaatttt 47264  T
Q  101 aaccatttgat 111  Q
    |||| ||||||    
T  47265 aaccgtttgat 47275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 22139 - 22193
Alignment:
Q  62 aggtggttcaccatagaccgtattaaattttttaattttaaccatttgatttatt 116  Q
    ||||||| ||||||||||| |||||| || |||||||| ||||||||||||||||    
T  22139 aggtggtccaccatagaccctattaatttctttaatttaaaccatttgatttatt 22193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 636 - 576
Alignment:
Q  64 gtggttcaccatagaccgtattaaattttttaattttaaccatttgatttattctttaaaa 124  Q
    ||||| ||||||||||| |||||||||||||||||| |||| |||||| | || |||||||    
T  636 gtggtccaccatagaccttattaaattttttaatttaaaccgtttgatctgttttttaaaa 576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 4117 - 4173
Alignment:
Q  47 gtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaac 103  Q
    ||||||||  |||| ||||||| ||||||| |||||||||||| ||||| |||||||    
T  4117 gtgaaccaactttataggtggtccaccataaaccgtattaaatcttttatttttaac 4173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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