View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17894_high_33 (Length: 230)
Name: NF17894_high_33
Description: NF17894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17894_high_33 |
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Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 33805627 - 33805826
Alignment:
| Q |
20 |
ccctgagcagacaattgaaatacaacaagaaagagatccaaacaaagggaaggccattatggtagttgagactaagaaggttagcaaagagatgaacatg |
119 |
Q |
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| T |
33805627 |
ccctgagcagacaattgaaatacaacaagaaagagatccaaacaaagggaaggccattatggtagttgagactaagaaggttagcaaagagatgaacatg |
33805726 |
T |
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| Q |
120 |
gagttcaataatgaaaaggcagaagatgctgatgaatcttcttctgaaggttctgaatttgtagaagatattgagattagggaggaaaacattgatgatg |
219 |
Q |
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| T |
33805727 |
gagtttaataatgaaaaggcagaagatgctgatgaatcttcttctgaaggttctgaatttgtagaagatattgagattagggaggaaaacattgatgatg |
33805826 |
T |
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