View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17896_high_39 (Length: 226)
Name: NF17896_high_39
Description: NF17896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17896_high_39 |
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Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 27764292 - 27764484
Alignment:
| Q |
20 |
ccaaacacctaacaaatacacatccaagaccaaagctgccatagctgatatcgaggttacattgatcgagactcatgcaaaccttagaattctcactagg |
119 |
Q |
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| T |
27764292 |
ccaaacacctaacaaatacacatccaagaccaaagctgccatagctgatatcgaggttacattgatcgagactcatgcaaaccttagaattctcactagg |
27764391 |
T |
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| Q |
120 |
acaagaccaggacaactaactaaattagtggctggttttcaaacactcttccttagtatcctacatctcaatgtcactaccatacaacctttg |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27764392 |
acaagaccaggacaactaactaaattagtggctggttttcaaagactcttccttagtatcctacatctcaatgtcactaccatacaacctttg |
27764484 |
T |
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