View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17896_low_1 (Length: 942)
Name: NF17896_low_1
Description: NF17896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17896_low_1 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 845; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 845; E-Value: 0
Query Start/End: Original strand, 1 - 936
Target Start/End: Complemental strand, 34692223 - 34691275
Alignment:
| Q |
1 |
taaaataaaaacaccaagttaaccaataatcaggaaaaactactacatgaaaaccctca-------------cgcaaaaaagacaagactcggatatgct |
87 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| |||||||||| ||||||||||| |
|
|
| T |
34692223 |
taaaataaaaacaccaagttaaccaataatcaggaaaaactactacattaaaaaaatcaggaaaaactactacgcaagaaagacaagaatcggatatgct |
34692124 |
T |
 |
| Q |
88 |
agtagtagtagttaataaaaattgatatgaacctaaaaattgaactttgaaatgagagatagggcataggaattaataatttagtttttcttgcatttga |
187 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34692123 |
agtagtagtagttaataaaaattgatatgaacctaaaaattgaactttgaaatgagagatagggcataggaattaataatttagtttttcttgcatttga |
34692024 |
T |
 |
| Q |
188 |
tgtttacaagaactaagagtggtagaatggctattagtttttcaaggctatattcatatgattgtagatttatttgattatagaactgtgtttaatttgt |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34692023 |
tgtttacaagaactaagagtggtagaatggctattagtttttcaaggttatattcatatgattgtagatttatttgattatagaactgtgtttaatttgt |
34691924 |
T |
 |
| Q |
288 |
tcatacatataggtaaaaagaaaaatatgatgagattatcatccacataaattaactatcagcaattattctaatgagtactgacatgcactcacctctt |
387 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34691923 |
tcatacatataggtaaaaagaaaaatattatgagattatcatccacataaattaactatcagcaattattctaatgagtactgacatgcactcacctctt |
34691824 |
T |
 |
| Q |
388 |
ctttgtcatcaagaattaagatagaattttctgtccccaacacaagatccagatctttcacgttcttttgagtcccatcatctcgagaaattaccttatc |
487 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34691823 |
ctttgtcatcaagaattacgatagaattttctgtccccaacacaagatccagatctttcacgttcttttgagtcccatcatctcgagaaattaccttatc |
34691724 |
T |
 |
| Q |
488 |
tttgaagtattccccttgaggatcaagcagcctggccatctctaatgagtactgccgatcacccatggtgtagatgtacatttcaaacatttcacttgct |
587 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34691723 |
tttgaagtattccccttgaggatcaagcagcctggccatctctaatgagtactgccgatcacccatggtgtagatgtacatttcaaacatttcacttgct |
34691624 |
T |
 |
| Q |
588 |
tctttaagaaatgtgcggacaaagggcctcaacttggtcattacttgcacatgctccaacatgaagaggctacctttagagatatctattgtttcatcct |
687 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
34691623 |
tctttaagaaatgtgcggacaaagggcctcaacttggtcattacttgcacatgctccaacatgaagaggctacctttagagatatctattgtttcattgt |
34691524 |
T |
 |
| Q |
688 |
atacaagttcagaaagaaagccataaaaacccagaacatcagatgaaatcaagaaagagtagtaagaaaatgcactcatgatgatgaaacatataaatga |
787 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34691523 |
atacaagttcagaaagaaagccataaaaacccagaacatcaggtgaaatcaagaaagagtagtaagaaaatgcactcatgatgatgaaacatataaatga |
34691424 |
T |
 |
| Q |
788 |
gtttcaaataccctaattttactaaaatgtaagaatttgagtaagtatttcactctatttaaaaacttattgtcgatataggaggagatgtaattttgag |
887 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34691423 |
gtttgaaataccctaattttactaaaatgtatgaatttgagtaagtatttcaatctatttaaaaacttattgtcgatataggaggagatgtaattttgag |
34691324 |
T |
 |
| Q |
888 |
gacatgaatctactctatatataacttatgatgttctatgtgatgatgt |
936 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34691323 |
gacatgaatctactctatatataacttatgatgttctatgtgatgatgt |
34691275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 792; Significance: 0; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 792; E-Value: 0
Query Start/End: Original strand, 1 - 936
Target Start/End: Complemental strand, 26990161 - 26989200
Alignment:
| Q |
1 |
taaaataaaaacaccaagttaaccaataatcaggaaaaactactacatgaaaaccctca-------------cgcaaaaaagacaagactcggatatgct |
87 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| |||||||||| ||||||||||| |
|
|
| T |
26990161 |
taaaataaaaacaccaagttaaccaataatcaggaaaaactactacattaaaaaaatcaggaaaaactactacgcaagaaagacaagaatcggatatgct |
26990062 |
T |
 |
| Q |
88 |
agtagtagtagt---taataaaaattgatatgaacctaaaaattgaactttgaaatgagagatagggc----ataggaattaataatttagtttttctt- |
179 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
26990061 |
agtagtagtagtagttaataaaaattgatatgaacctaaaaattgaacttcgaaatgagagatagggcgggcataggaattaataatttagtttttcttt |
26989962 |
T |
 |
| Q |
180 |
-----gcatttgatgtttacaagaactaagagtggtagaatggctattagtttttcaaggctatattcatatgattgtagatttatttgattatagaact |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26989961 |
catttgcatttgatgtttacaagaactaagagtggtagaatggctattagtttttcaaggttatattcatatgattgtagatttatttgattatagaact |
26989862 |
T |
 |
| Q |
275 |
gtgtttaatttgttcatacatataggtaaaaagaaaaatatgatgagattatcatccacataaattaactatcagcaattattctaatgagtactgacat |
374 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26989861 |
gtgtttaatttgttcatacatataggtaaaatgaaaaatattatgagattatcatccacataaattaactatcagcaattattctaatgagtactgacat |
26989762 |
T |
 |
| Q |
375 |
gcactcacctcttctttgtcatcaagaattaagatagaattttctgtccccaacacaagatccagatctttcacgttcttttgagtcccatcatctcgag |
474 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26989761 |
gcactcacctcttctttgtcatcaagaattatgatagaattttctgtccccaacacaagatccagatctttcacgttcttttgagtcccatcatctcgag |
26989662 |
T |
 |
| Q |
475 |
aaattaccttatctttgaagtattccccttgaggatcaagcagcctggccatctctaatgagtactgccgatcacccatggtgtagatgtacatttcaaa |
574 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26989661 |
aaattaccttatctttgaagtattccccttgaggatcaagcagcctggccatctctaatgagtactgccgatcacccatggtgtagatgtacatttcaaa |
26989562 |
T |
 |
| Q |
575 |
catttcacttgcttctttaagaaatgtgcggacaaagggcctcaacttggtcattacttgcacatgctccaacatgaagaggctacctttagagatatct |
674 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26989561 |
catttcacttgcttctttaagaaatgtgcggacaaagggcctcaacttggtcattacttgcacatgctccaacatgaagaggctacctttagagatatct |
26989462 |
T |
 |
| Q |
675 |
attgtttcatcctatacaagttcagaaagaaagccataaaaacccagaacatcagatgaaatcaagaaagagtagtaagaaaatgcactcatgatgatga |
774 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26989461 |
attgtttcattgtatacaagttcagaaagaaagccataaaaacccagaacatcaggtgaaatcaagaaagagtagtaagaaaatgcactcatgatgatga |
26989362 |
T |
 |
| Q |
775 |
aacatataaatgagtttcaaataccctaattttactaaaatgtaagaatttgagtaagtatttcactctatttaaaaacttattgtcgatataggaggag |
874 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26989361 |
aacatataaatgagtttgaaataccctaattttactaaaatgtatgaatttgagtaagtatttcaatctatttaaaaacttattgtcgatataggaggag |
26989262 |
T |
 |
| Q |
875 |
atgtaattttgaggacatgaatctactctatatataacttatgatgttctatgtgatgatgt |
936 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26989261 |
atgtaattttgaggatatgaatctactctatatataacttatgatgttctatgtgatgatgt |
26989200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 374 - 936
Target Start/End: Original strand, 27075538 - 27076075
Alignment:
| Q |
374 |
tgcactcacctcttctttgtcatcaagaattaagatagaattttctgtccccaacacaagatccagatctttcacgttcttttgagtcccatcatctcga |
473 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| |
|
|
| T |
27075538 |
tgcactcacctcttctttatcatcaagaattaagatagaattttctgtccccaacacaagatccagatccttcacattcttttgagtcccatcctctcga |
27075637 |
T |
 |
| Q |
474 |
gaaattaccttatctttgaagtattccccttgaggatcaagcagcctggccatctctaatgagtactgccgatcacccatggtgtagatgtacatttcaa |
573 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
27075638 |
gaaattaccttatctttgaagtattcctcttgaggatcaagcagcctagccatctctaatgaatattgccgatcacccatggtgtagatgtacatttcaa |
27075737 |
T |
 |
| Q |
574 |
acatttcacttgcttctttaagaaatgtgcggacaaagggcctcaacttggtcattacttgcacatgctccaacatgaagaggctacctttagagatatc |
673 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27075738 |
acatttcacttgcttgtttaagaaatgtgcggacaaagggcctcaacttggtcattacttgcatatgcgccaacatgaagaggctacctttagagatatc |
27075837 |
T |
 |
| Q |
674 |
tattgtttcatcctatacaagttcagaaagaaagccataaaaacccagaacatc--agatgaaatcaagaaagagtagtaagaaaatgcactcatgatga |
771 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27075838 |
tattgtttcatcatataca----------------------aacccagaacatcaaaggtgacatcaagaaagagtagtaagaaaatgcactcatgatga |
27075915 |
T |
 |
| Q |
772 |
tgaaacatataaatgagtttcaaataccctaattttactaaaatgtaagaatttgagtaagtatttcactctatttaaaaacttattgtcgatataggag |
871 |
Q |
| |
|
|||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || ||| | |||||||||| ||||||| ||||||| || |
|
|
| T |
27075916 |
tgaagcatataaatgagtttgaaataccttaattttactaaaatgtaagaatttgagtaagcatgtcaatatatttaaaaaattattgttgatatagaag |
27076015 |
T |
 |
| Q |
872 |
gagatgtaattttgaggacatgaatctactctatatataacttatgatgttctatgtgatgatgt |
936 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27076016 |
gagatgtaattttgaggacatgaa-----tctatatatgacttatgatgttctatgtgatgatgt |
27076075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 374 - 703
Target Start/End: Complemental strand, 27028581 - 27028252
Alignment:
| Q |
374 |
tgcactcacctcttctttgtcatcaagaattaagatagaattttctgtccccaacacaagatccagatctttcacgttcttttgagtcccatcatctcga |
473 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
27028581 |
tgcactcacctcttctttatcatcaagaattaagatagaattttctgtccccaacacaagatccagatccttcacgttcttttgagtcccatcctctcga |
27028482 |
T |
 |
| Q |
474 |
gaaattaccttatctttgaagtattccccttgaggatcaagcagcctggccatctctaatgagtactgccgatcacccatggtgtagatgtacatttcaa |
573 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
27028481 |
gaaattaccttatctttgaagtagagcccttgaggatcaagcagcttggccatctctaacgagtaccgccgatcacccatggtgtagatgtacatttcaa |
27028382 |
T |
 |
| Q |
574 |
acatttcacttgcttctttaagaaatgtgcggacaaagggcctcaacttggtcattacttgcacatgctccaacatgaagaggctacctttagagatatc |
673 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27028381 |
acatttcacttgcttctttaagaaatgtgcggacaaagggcctcaacttggtcattacttgcacatgctccaacatgaagaggctacctttagagatatc |
27028282 |
T |
 |
| Q |
674 |
tattgtttcatcctatacaagttcagaaag |
703 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |
|
|
| T |
27028281 |
tattgtttcatcatatacaagttcagaaag |
27028252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 375 - 690
Target Start/End: Complemental strand, 21433760 - 21433445
Alignment:
| Q |
375 |
gcactcacctcttctttgtcatcaagaattaagatagaattttctgtccccaacacaagatccagatctttcacgttcttttgagtcccatcatctcgag |
474 |
Q |
| |
|
|||||||||| || || ||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||| | ||| ||| ||||||||||||||||| |
|
|
| T |
21433760 |
gcactcacctttttattatcatcaagaattaggatagaactttctgtccccaacacaagattcagatccttctccttcatttcagtcccatcatctcgag |
21433661 |
T |
 |
| Q |
475 |
aaattaccttatctttgaagtattccccttgaggatcaagcagcctggccatctctaatgagtactgccgatcacccatggtgtagatgtacatttcaaa |
574 |
Q |
| |
|
|||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
21433660 |
aaatcaccttatctttgaagaatttcccttgaggatcaagcagcctggccatctctaatgagtaccgccgatcacccatggtgtagatgtacatttcaaa |
21433561 |
T |
 |
| Q |
575 |
catttcacttgcttctttaagaaatgtgcggacaaagggcctcaacttggtcattacttgcacatgctccaacatgaagaggctacctttagagatatct |
674 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| | |||||| |||||| | | ||||||| |
|
|
| T |
21433560 |
cattttacttgcttctttaagaaatgtgcggacaaagggcctcaacttggccattctttgcctatgctccaatacgaagagtctacctctggcgatatct |
21433461 |
T |
 |
| Q |
675 |
attgtttcatcctata |
690 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
21433460 |
attgtttcatcatata |
21433445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 419 - 629
Target Start/End: Complemental strand, 27152686 - 27152476
Alignment:
| Q |
419 |
tgtccccaacacaagatccagatctttcacgttcttttgagtcccatcatctcgagaaattaccttatctttgaagtattccccttgaggatcaagcagc |
518 |
Q |
| |
|
|||||||||||||| || |||||| ||| ||| ||| |||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
27152686 |
tgtccccaacacaacattcagatccttctgcttcatttcagtcccatcatctcaataaatcaccttatctttgaagtattccacttgaggatcaagcagc |
27152587 |
T |
 |
| Q |
519 |
ctggccatctctaatgagtactgccgatcacccatggtgtagatgtacatttcaaacatttcacttgcttctttaagaaatgtgcggacaaagggcctca |
618 |
Q |
| |
|
|||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
27152586 |
ttggccatctctagtgaatactgccgaatacccatggtgtagatgtacatttcaaacacttcacttgcttctttaagaaatgtacggacgaagggcctca |
27152487 |
T |
 |
| Q |
619 |
acttggtcatt |
629 |
Q |
| |
|
||||| ||||| |
|
|
| T |
27152486 |
acttgttcatt |
27152476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 867 - 936
Target Start/End: Complemental strand, 27152155 - 27152086
Alignment:
| Q |
867 |
aggaggagatgtaattttgaggacatgaatctactctatatataacttatgatgttctatgtgatgatgt |
936 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27152155 |
aggaggagatgtaattttgaggacatgaatctactctatatataacttatgatgttctatgtgatgatgt |
27152086 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 143 - 324
Target Start/End: Original strand, 27075239 - 27075433
Alignment:
| Q |
143 |
gagatagggcataggaattaataatttagtttttctt------gcatttgatgtttacaagaactaagagtggtagaatgg-ctattagtttttcaaggc |
235 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||| |||||| | |||||| ||||| ||||| |
|
|
| T |
27075239 |
gagatagggcatatgaattaataatttagtttttctttcatttgcatttgatgtttgcaggaactaagagcaatagaattgtctattatttttttaaggc |
27075338 |
T |
 |
| Q |
236 |
tatattcatatgattgtagatttatttgatt------atagaactgtgtttaatttgttcatacatataggtaaaaagaaaaatatgatgagatt |
324 |
Q |
| |
|
| | ||||| ||||||| |||| ||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
27075339 |
gagactcatacgattgtaaatttctttgattcatattatatagatgtgtttaatttgttcatacatataggtgaaaagaaaaatattatgagatt |
27075433 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 264 - 348
Target Start/End: Complemental strand, 27152867 - 27152783
Alignment:
| Q |
264 |
attatagaactgtgtttaatttgttcatacatataggtaaaaagaaaaatatgatgagattatcatccacataaattaactatca |
348 |
Q |
| |
|
|||||| || |||||||| |||||| || ||||||||||||||||||||| | ||||||| |||||| |||| ||||||||||| |
|
|
| T |
27152867 |
attatacaattgtgtttagtttgttaattcatataggtaaaaagaaaaatgttttgagattttcatcctcatagattaactatca |
27152783 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 27028669 - 27028619
Alignment:
| Q |
280 |
taatttgttcatacatataggtaaaaagaaaaatatgatgagattatcatc |
330 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
27028669 |
taatttgttcgtacatataggtaaaaagaaaaatattatgagattgtcatc |
27028619 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27029072 - 27029032
Alignment:
| Q |
1 |
taaaataaaaacaccaagttaaccaataatcaggaaaaact |
41 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
27029072 |
taaaataaaaacaccaagttaaccaataatcagaaaaaact |
27029032 |
T |
 |
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Target: chr4 (Bit Score: 119; Significance: 3e-60; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 454 - 676
Target Start/End: Original strand, 50172850 - 50173072
Alignment:
| Q |
454 |
tttgagtcccatcatctcgagaaattaccttatctttgaagtattccccttgaggatcaagcagcctggccatctctaatgagtactgccgatcacccat |
553 |
Q |
| |
|
||||||||||||||||||||||||| || ||| ||||||||||| |||||||||||||||||| |||||||||| |||| || ||| ||||||||| |
|
|
| T |
50172850 |
tttgagtcccatcatctcgagaaatcactttagaattgaagtattctccttgaggatcaagcagcttggccatctccaatgcatagggcctatcacccat |
50172949 |
T |
 |
| Q |
554 |
ggtgtagatgtacatttcaaacatttcacttgcttctttaagaaatgtgcggacaaagggcctcaacttggtcattacttgcacatgctccaacatgaag |
653 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | |||| |||||||| ||||| |
|
|
| T |
50172950 |
ggtgtagatgtacatctcaaacatttcacttgcttctttaagaaatgtacggacaaagggcctcaactttgtcatcatgtgcatatgctccagtttgaag |
50173049 |
T |
 |
| Q |
654 |
aggctacctttagagatatctat |
676 |
Q |
| |
|
||||| ||||| |||| |||||| |
|
|
| T |
50173050 |
aggctgcctttggagacatctat |
50173072 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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