View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17897_high_45 (Length: 311)
Name: NF17897_high_45
Description: NF17897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17897_high_45 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 47117230 - 47117508
Alignment:
| Q |
18 |
cacaagttatgtcgcatcaaacaattgatgaagaagaagacgatgacgatgttcctcttgactattctgcaattagtggcactagaagcatcggacttgg |
117 |
Q |
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| T |
47117230 |
cacaagttatgtcgcatcaaacaattgatgaagaagaagacgatgacgatgttcctcttgactattctgcaattagtggcactagaagcatcggacttgg |
47117329 |
T |
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| Q |
118 |
tggtggaagagcagcgcggcctcgctcccctgtggtagctattattcctttcttacttgtatttatattgatatgttgttgaatgttcattcatccaatt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47117330 |
tggtggaagagcagcgcggcctcgctcccctgtggtagctattatttctttcttacttgtatttatattgatatgttgttgaatgttcattcatccaatt |
47117429 |
T |
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| Q |
218 |
cgatgatgttgttgcattctattagacagttaagagtactcaagaacaacctccaccaatgagacctcgttcacctatg |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47117430 |
cgatgatgttgttgcattctattagacagttaagagtactcaagaacaacctccaccaatgagacctcgttcacctatg |
47117508 |
T |
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