View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17897_high_76 (Length: 228)
Name: NF17897_high_76
Description: NF17897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17897_high_76 |
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Alignment Details
Target: chr7 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 2432184 - 2432366
Alignment:
| Q |
14 |
atgaatcaatctgtgctgggaatttccaccgttgactataactaagcctcaccaaattaaaggtcgtgaggtctttaacaccaatacccccataattttt |
113 |
Q |
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| T |
2432184 |
atgaatcaatctgtgtttggaatttccaccgttgaatataactaagcctcaccaaattaaaggtcgtgaggtctttaaaaccaataccaccataattttc |
2432283 |
T |
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| Q |
114 |
atgagcattaagcttgtatcaagatagctaatacattcatttattcgtagacgctctacgacacctccagtacacattcatca |
196 |
Q |
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||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||| |||| |
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| T |
2432284 |
atgagcattaagcttctatcaagatagctaatacattcctttattcgtagacgctctacgacacatctagtacacatttatca |
2432366 |
T |
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