View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17897_low_38 (Length: 339)
Name: NF17897_low_38
Description: NF17897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17897_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 52995274 - 52995498
Alignment:
| Q |
12 |
atgaacaacgatgactgttcttgatggaactataacagaaacctctttgacaccttgaagaggtttgagaatgttttcaatcagaggtacctctgaggaa |
111 |
Q |
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| T |
52995274 |
atgaacaacgatgactgttcttgatggaactataacagaaacctctttgacaccttgaagaggtttgagaatgttttcaatcagaggtacctctgaggaa |
52995373 |
T |
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| Q |
112 |
caacataatcccaccacatcaaagtagcttttttgcaactttttccctccttcagaagaagacatcttgatcactacaattttgatcacctaattaatta |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52995374 |
caacataatcccaccacatcaaagtagcttttttgcaactttttccctccttcagaagaagacatcttgatcactacaattttgatcacctaattaatta |
52995473 |
T |
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| Q |
212 |
gaccaaaatgaaaataatttagtta |
236 |
Q |
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| T |
52995474 |
gaccaaaatgaaaataatttagtta |
52995498 |
T |
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