View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17897_low_54 (Length: 294)
Name: NF17897_low_54
Description: NF17897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17897_low_54 |
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Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 22 - 282
Target Start/End: Original strand, 31351270 - 31351530
Alignment:
| Q |
22 |
agtagtagtagttgaagacaaagtaaactataagttgagacatcatttcaaagtacaagcatggacaacaaaaatcgtatttctttgtctttcctccacc |
121 |
Q |
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| T |
31351270 |
agtagtagtagttgaagacaaagtaaactataagttgagacatcatttcaaagtacaaacatggacaacaaaaatcgtatttctttgtctttcctccacc |
31351369 |
T |
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| Q |
122 |
aaatccgcgttgacttttttctgttgactatatcatgttcttctccaggctatgtttctgcttgcagaagaagcatggcacaggctctgaagatggtgga |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31351370 |
aaatccgcgttgacttttttctgttgactatatcatgttcttctccaggctatgtttctgcttgcagaagaagcatggcacaggctctgaagatggtgga |
31351469 |
T |
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| Q |
222 |
gatgatgatgaagacacggtggatcctggtgactctggtaatttgttgtttgagttgaata |
282 |
Q |
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| T |
31351470 |
gatgatgatgaagacacggtggatcctggtgactctggtaatttgttgtttgagttgaata |
31351530 |
T |
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