View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17897_low_68 (Length: 252)
Name: NF17897_low_68
Description: NF17897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17897_low_68 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 16 - 236
Target Start/End: Complemental strand, 33564768 - 33564548
Alignment:
| Q |
16 |
ggacttgttttattgaaggtcttgctcttccttctctctgtgtgcaccatcctactatagaaattactgtttgaagctgatccaagtcaaaagattccct |
115 |
Q |
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| T |
33564768 |
ggacttgttttattgaaggtcttgctcttccttctctctgtgtgcaccatcctactatagaaattactgtttgaagctgatccaagtcaaaagattccct |
33564669 |
T |
|
| Q |
116 |
cacattgggatctactagttctaataatctagtttctgattccatgtatggtttggcccattccaccaaattcttattatcttgaatagctcttcttcct |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33564668 |
cacattgggatctactagttctaataatctagtttctgattccatgtatggtttggcccattccaccaaattcttattatcttgaatagctcttcttcct |
33564569 |
T |
|
| Q |
216 |
gtcacaatttccagtagtaac |
236 |
Q |
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||||||||||||||||||||| |
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| T |
33564568 |
gtcacaatttccagtagtaac |
33564548 |
T |
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