View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17897_low_87 (Length: 211)

Name: NF17897_low_87
Description: NF17897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17897_low_87
NF17897_low_87
[»] chr7 (2 HSPs)
chr7 (1-198)||(29685364-29685561)
chr7 (36-82)||(46170690-46170736)
[»] chr4 (12 HSPs)
chr4 (2-123)||(29538075-29538196)
chr4 (2-54)||(33817860-33817912)
chr4 (2-59)||(40882685-40882741)
chr4 (134-198)||(10651852-10651916)
chr4 (134-198)||(10865997-10866061)
chr4 (26-71)||(40991356-40991401)
chr4 (134-198)||(5238457-5238521)
chr4 (26-64)||(10308729-10308767)
chr4 (12-61)||(16557831-16557880)
chr4 (34-79)||(38519339-38519384)
chr4 (71-124)||(52163317-52163370)
chr4 (36-76)||(17340088-17340128)
[»] chr1 (5 HSPs)
chr1 (5-125)||(18315421-18315541)
chr1 (23-75)||(25525935-25525987)
chr1 (33-79)||(44410764-44410810)
chr1 (34-82)||(3794194-3794242)
chr1 (26-62)||(24144675-24144711)
[»] chr3 (6 HSPs)
chr3 (14-123)||(46210481-46210590)
chr3 (28-86)||(51386785-51386843)
chr3 (3-56)||(9759370-9759423)
chr3 (34-71)||(6101926-6101963)
chr3 (34-82)||(15100653-15100701)
chr3 (34-82)||(42217167-42217215)
[»] chr8 (6 HSPs)
chr8 (2-72)||(42642551-42642621)
chr8 (131-198)||(188839-188906)
chr8 (2-79)||(6268556-6268632)
chr8 (31-64)||(26404429-26404462)
chr8 (6-56)||(6269683-6269733)
chr8 (34-79)||(4455361-4455406)
[»] chr2 (4 HSPs)
chr2 (27-131)||(41266810-41266913)
chr2 (2-71)||(5193977-5194048)
chr2 (36-82)||(37484452-37484498)
chr2 (34-79)||(16106721-16106766)
[»] chr6 (2 HSPs)
chr6 (134-198)||(14813915-14813979)
chr6 (33-82)||(6817339-6817388)
[»] scaffold0242 (1 HSPs)
scaffold0242 (34-82)||(17858-17906)


Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 29685561 - 29685364
Alignment:
Q  1 agtcataaatatttttatataaaccgggtcaatagtcatgcggtccgaccagtgactcattggttcgaccagtaacccaatgccttaatcggatcgatca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  29685561 agtcataaatatttttatataaaccgggtcaatagtcatgcggtccgaccagtgacccattgattcgaccagtaacccagtgccttaatcggatcgatca 29685462  T
Q  101 cctgtccgggttttaaaacattgattctattagttgctcttgagagaaaccagtagaagaagagcttgtagaagcacccaaaccataagaagatattg 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29685461 cctgtccgggttttaaaacattgattctattagttgctcttgagagaaaccagtagaagaagagcttgtagaagcacccaaaccataagaagatattg 29685364  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 46170736 - 46170690
Alignment:
Q  36 tcatgcggtccgaccagtgactcattggttcgaccagtaacccaatg 82  Q
    ||||||||| |||||| ||||||| ||||||||||| ||||||||||    
T  46170736 tcatgcggttcgaccattgactcagtggttcgaccattaacccaatg 46170690  T

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Target: chr4 (Bit Score: 66; Significance: 2e-29; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 29538196 - 29538075
Alignment:
Q  2 gtcataaatatttttatataaaccgggtcaatagtcatgcggtccgaccagtgactcattggttcgaccagtaacccaatgccttaatcggatcgatcac 101  Q
    |||||||||||||| ||||| ||||| ||||||||||||| ||| || ||||||| || ||||||||| ||| ||||| |||||| ||||| ||||||||    
T  29538196 gtcataaatattttgatatagaccggatcaatagtcatgcagtcggatcagtgacccactggttcgactagtgacccagtgccttgatcgggtcgatcac 29538097  T
Q  102 ctgtccgggttttaaaacattg 123  Q
    | ||||||||||||||||||||    
T  29538096 cggtccgggttttaaaacattg 29538075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 33817860 - 33817912
Alignment:
Q  2 gtcataaatatttttatataaaccgggtcaatagtcatgcggtccgaccagtg 54  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  33817860 gtcataaatatttttatatagaccgggttaatagtcatgcggtccgaccagtg 33817912  T

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Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 40882685 - 40882741
Alignment:
Q  2 gtcataaatatttttatataaaccgggtcaatagtcatgcggtccgaccagtgactca 59  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  40882685 gtcataaatatttttatatatac-gggtcaatagtcatgcggtccgatcagtgactca 40882741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 10651916 - 10651852
Alignment:
Q  134 ttgctcttgagagaaaccagtagaagaagagcttgtagaagcacccaaaccataagaagatattg 198  Q
    |||||||||||| ||||||||||||| |||||||| ||||| |||||||||| ||||||| ||||    
T  10651916 ttgctcttgagaaaaaccagtagaaggagagcttgcagaagtacccaaaccagaagaagacattg 10651852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 10866061 - 10865997
Alignment:
Q  134 ttgctcttgagagaaaccagtagaagaagagcttgtagaagcacccaaaccataagaagatattg 198  Q
    |||||||||||| ||||||||||||| |||||||| ||||| |||||||||| ||||||| ||||    
T  10866061 ttgctcttgagaaaaaccagtagaaggagagcttgcagaagtacccaaaccagaagaagacattg 10865997  T

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Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 40991356 - 40991401
Alignment:
Q  26 gggtcaatagtcatgcggtccgaccagtgactcattggttcgacca 71  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  40991356 gggtcaatagtcatgcggtccgaccagtgacccattggtccgacca 40991401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 5238521 - 5238457
Alignment:
Q  134 ttgctcttgagagaaaccagtagaagaagagcttgtagaagcacccaaaccataagaagatattg 198  Q
    |||||||||||| ||||||| ||||| |||||||| ||||| |||||| ||| ||||||| ||||    
T  5238521 ttgctcttgagaaaaaccagcagaaggagagcttgcagaagtacccaatccagaagaagacattg 5238457  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 10308729 - 10308767
Alignment:
Q  26 gggtcaatagtcatgcggtccgaccagtgactcattggt 64  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  10308729 gggtcaatagtcatgcggtccgaccagtgatccattggt 10308767  T

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Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 16557831 - 16557880
Alignment:
Q  12 tttttatataaaccgggtcaatagtcatgcggtccgaccagtgactcatt 61  Q
    |||||||| |||| |  ||||||| |||||||||||||||||||||||||    
T  16557831 tttttataaaaactgaatcaatagacatgcggtccgaccagtgactcatt 16557880  T

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Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 38519384 - 38519339
Alignment:
Q  34 agtcatgcggtccgaccagtgactcattggttcgaccagtaaccca 79  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||    
T  38519384 agtcatgcggttcaaccagtgactcaatggttcgaccattaaccca 38519339  T

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Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 52163317 - 52163370
Alignment:
Q  71 agtaacccaatgccttaatcggatcgatcacctgtccgggttttaaaacattga 124  Q
    ||||||||| |||||| | ||  ||||||||| |||||||||||||||||||||    
T  52163317 agtaacccagtgccttgaccgtgtcgatcaccggtccgggttttaaaacattga 52163370  T

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Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 17340128 - 17340088
Alignment:
Q  36 tcatgcggtccgaccagtgactcattggttcgaccagtaac 76  Q
    ||||||||| ||||||||||||||||||| ||| |||||||    
T  17340128 tcatgcggttcgaccagtgactcattggtccgatcagtaac 17340088  T

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Target: chr1 (Bit Score: 57; Significance: 5e-24; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 18315421 - 18315541
Alignment:
Q  5 ataaatatttttatataaaccgggtcaatagtcatgcggtccgaccagtgactcattggttcgaccagtaacccaatgccttaatcggatcgatcacctg 104  Q
    ||||||||||||||||| | | |||||||||||||||||| ||||  ||||| ||  ||||||||| ||  |||| |||||| | ||||||||||||| |    
T  18315421 ataaatatttttatatagatcaggtcaatagtcatgcggtacgactggtgacccaccggttcgaccggtgccccagtgccttgaccggatcgatcaccgg 18315520  T
Q  105 tccgggttttaaaacattgat 125  Q
    |||||||||||||||||||||    
T  18315521 tccgggttttaaaacattgat 18315541  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 25525935 - 25525987
Alignment:
Q  23 accgggtcaatagtcatgcggtccgaccagtgactcattggttcgaccagtaa 75  Q
    |||||||||||||||||||| ||||||||| ||| || || ||||||||||||    
T  25525935 accgggtcaatagtcatgcgatccgaccagggacccactgattcgaccagtaa 25525987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 44410810 - 44410764
Alignment:
Q  33 tagtcatgcggtccgaccagtgactcattggttcgaccagtaaccca 79  Q
    |||||||||||| | |||||||||||| ||||||||||| |||||||    
T  44410810 tagtcatgcggttcaaccagtgactcagtggttcgaccattaaccca 44410764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 3794242 - 3794194
Alignment:
Q  34 agtcatgcggtccgaccagtgactcattggttcgaccagtaacccaatg 82  Q
    ||||||||||| | |||| ||||||| ||||||||||| ||||||||||    
T  3794242 agtcatgcggttcaaccaatgactcagtggttcgaccattaacccaatg 3794194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 24144711 - 24144675
Alignment:
Q  26 gggtcaatagtcatgcggtccgaccagtgactcattg 62  Q
    |||||||||||||||||||| |||||||||| |||||    
T  24144711 gggtcaatagtcatgcggtctgaccagtgacccattg 24144675  T

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Target: chr3 (Bit Score: 54; Significance: 3e-22; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 46210481 - 46210590
Alignment:
Q  14 tttatataaaccgggtcaatagtcatgcggtccgaccagtgactcattggttcgaccagtaacccaatgccttaatcggatcgatcacctgtccgggttt 113  Q
    |||||||| ||||| |||||||||||||| ||||||||||||| || || ||||| |||| | ||| |||||| | ||| ||||||||| ||||||||||    
T  46210481 tttatatagaccggatcaatagtcatgcgatccgaccagtgacccactgattcgatcagtgatccagtgccttgaccgggtcgatcaccggtccgggttt 46210580  T
Q  114 taaaacattg 123  Q
    ||||||||||    
T  46210581 taaaacattg 46210590  T

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Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 51386785 - 51386843
Alignment:
Q  28 gtcaatagtcatgcggtccgaccagtgactcattggttcgaccagtaacccaatgcctt 86  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| | ||||| ||||||    
T  51386785 gtcaatagtcatgcggtccgatcagtgacacattggttcgaccactgacccagtgcctt 51386843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 9759370 - 9759423
Alignment:
Q  3 tcataaatatttttatataaaccgggtcaatagtcatgcggtccgaccagtgac 56  Q
    ||||||||||||||||||| ||||| |||||||||||| | |||||||| ||||    
T  9759370 tcataaatatttttatatagaccggatcaatagtcatgtgatccgaccaatgac 9759423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 6101926 - 6101963
Alignment:
Q  34 agtcatgcggtccgaccagtgactcattggttcgacca 71  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  6101926 agtcatgcggttcgaccagtgactcaatggttcgacca 6101963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 15100701 - 15100653
Alignment:
Q  34 agtcatgcggtccgaccagtgactcattggttcgaccagtaacccaatg 82  Q
    ||||||||||| | | |||||||||| ||||||||||| ||||||||||    
T  15100701 agtcatgcggttcaatcagtgactcagtggttcgaccattaacccaatg 15100653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 42217167 - 42217215
Alignment:
Q  34 agtcatgcggtccgaccagtgactcattggttcgaccagtaacccaatg 82  Q
    ||||||||||| | |||||||||||| ||||||||||| |||| |||||    
T  42217167 agtcatgcggttcaaccagtgactcagtggttcgaccattaactcaatg 42217215  T

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Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 42642551 - 42642621
Alignment:
Q  2 gtcataaatatttttatataaaccgggtcaatagtcatgcggtccgaccagtgactcattggttcgaccag 72  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||  || ||||||||||||    
T  42642551 gtcataaatatttttatatagactggatcaatagtcatgcggtccgaccagtgaaccactggttcgaccag 42642621  T

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Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 188906 - 188839
Alignment:
Q  131 tagttgctcttgagagaaaccagtagaagaagagcttgtagaagcacccaaaccataagaagatattg 198  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||| ||||||| ||||    
T  188906 tagttgctcttgagaaaaaccagcagaagaagagcttgcagaagtacccaaaccagaagaagacattg 188839  T

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Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 6268556 - 6268632
Alignment:
Q  2 gtcataaatatttttatataaaccgggtcaatagtcatgcggtccgaccagtgactcattggttcgaccagtaaccca 79  Q
    |||||||||||||| ||||| | |||||||||||||| ||||||  ||||||||| || ||||| |||||||||||||    
T  6268556 gtcataaatatttt-atatagatcgggtcaatagtcaagcggtctaaccagtgacccactggtttgaccagtaaccca 6268632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 26404462 - 26404429
Alignment:
Q  31 aatagtcatgcggtccgaccagtgactcattggt 64  Q
    ||||||||||||||||||||||||||||||||||    
T  26404462 aatagtcatgcggtccgaccagtgactcattggt 26404429  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 6269733 - 6269683
Alignment:
Q  6 taaatatttttatataaaccgggtcaatagtcatgcggtccgaccagtgac 56  Q
    |||||||||||||||| | ||| ||| ||||||||||||| ||||||||||    
T  6269733 taaatatttttatatagatcggatcagtagtcatgcggtctgaccagtgac 6269683  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 4455361 - 4455406
Alignment:
Q  34 agtcatgcggtccgaccagtgactcattggttcgaccagtaaccca 79  Q
    ||||||||||| |||||| ||||||| ||||||||||||| |||||    
T  4455361 agtcatgcggttcgaccaatgactcagtggttcgaccagtgaccca 4455406  T

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Target: chr2 (Bit Score: 45; Significance: 8e-17; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 41266810 - 41266913
Alignment:
Q  27 ggtcaatagtcatgcggtccgaccagtgactcattggttcgaccagtaacccaatgccttaatcggatcgatcacctgtccgggttttaaaacattgatt 126  Q
    |||||||||||||||||||||||||||| | ||| | | |||||| | |||||||||||| | ||| ||||  ||| |||||||||||||||||||||||    
T  41266810 ggtcaatagtcatgcggtccgaccagtggcccat-gatccgaccactgacccaatgccttgaccgggtcgactaccggtccgggttttaaaacattgatt 41266908  T
Q  127 ctatt 131  Q
     ||||    
T  41266909 ttatt 41266913  T

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Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 5193977 - 5194048
Alignment:
Q  2 gtcataaatattttt--atataaaccgggtcaatagtcatgcggtccgaccagtgactcattggttcgacca 71  Q
    |||||||||||||||  ||||| |||||||||||| |||||||||  ||||| |||| ||||||||||||||    
T  5193977 gtcataaatatttttttatatagaccgggtcaataatcatgcggtttgaccaatgacccattggttcgacca 5194048  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 37484498 - 37484452
Alignment:
Q  36 tcatgcggtccgaccagtgactcattggttcgaccagtaacccaatg 82  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||||    
T  37484498 tcatgcggttcgaccagtgactcaatggttcgatcaataacccaatg 37484452  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 16106721 - 16106766
Alignment:
Q  34 agtcatgcggtccgaccagtgactcattggttcgaccagtaaccca 79  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||    
T  16106721 agtcatgcggttcaaccagtgactcagtggttcgaccattaaccca 16106766  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 14813979 - 14813915
Alignment:
Q  134 ttgctcttgagagaaaccagtagaagaagagcttgtagaagcacccaaaccataagaagatattg 198  Q
    |||||||||||| ||||||| ||||| |||||||| ||||| |||||| ||| ||||||| ||||    
T  14813979 ttgctcttgagaaaaaccagcagaaggagagcttgcagaagtacccaatccagaagaagacattg 14813915  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 6817388 - 6817339
Alignment:
Q  33 tagtcatgcggtccgaccagtgactcattggttcgaccagtaacccaatg 82  Q
    |||| ||||||| | |||||||||||| ||||||||||| ||||||||||    
T  6817388 tagttatgcggttcaaccagtgactcagtggttcgaccattaacccaatg 6817339  T

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Target: scaffold0242 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 17858 - 17906
Alignment:
Q  34 agtcatgcggtccgaccagtgactcattggttcgaccagtaacccaatg 82  Q
    ||||||||||| | |||| ||||||| ||||||||||| ||||||||||    
T  17858 agtcatgcggttcaaccaatgactcaatggttcgaccattaacccaatg 17906  T

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