View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17898_high_10 (Length: 392)
Name: NF17898_high_10
Description: NF17898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17898_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 16 - 376
Target Start/End: Complemental strand, 982540 - 982180
Alignment:
| Q |
16 |
tatatatatacaacatattttttctaatttcaactttgcaagcaaaaaattattcacaatatgacgactattcacatctaaaagataattttcattttaa |
115 |
Q |
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| T |
982540 |
tatatatatacaacatattttttctaatttcaacattgcaagcaaaaaattattcacaatatgacgactattcacatctaaaagataattttcattttag |
982441 |
T |
|
| Q |
116 |
aatatacagacaacattgttacttatcacatttgaaggttatgttttattctttcaacaaaatatttgtatctatcatggacgattttgaataaaagcta |
215 |
Q |
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| T |
982440 |
aatatacagacaacattgttacttatcacatttgaaggttatgttttattctttcaacaaaatatttgtatttatcatggaagattttgaataaaagcta |
982341 |
T |
|
| Q |
216 |
tgtataacatgttcatcagtgacatcatgtagatagtcaaatggaatcacattaaaaatgtgttcattggaaacatatcataatcatttaatttattgtg |
315 |
Q |
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| T |
982340 |
tgtataacatgttcatcagtgacatcacgtagatagtcaaatggaatcacattaaaaatttgttcattggaaacatatcataatcatttaatttattgtg |
982241 |
T |
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| Q |
316 |
taaactatgatgtttttgataacaacaaacaaaagtatttgctctcataatatctcaaaac |
376 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
982240 |
taaactatgatgtttccgataacaacaaacaaaagtatttgctctcagaatatctcaaaac |
982180 |
T |
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