View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17898_high_31 (Length: 231)
Name: NF17898_high_31
Description: NF17898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17898_high_31 |
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Alignment Details
Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 212
Target Start/End: Original strand, 34058970 - 34059170
Alignment:
| Q |
12 |
tgagatgaactttttactcttccactttgactataaatacctacaccattgtcttaagttactcacaagcaaaccaaaaatatttcacttagcaactaaa |
111 |
Q |
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| T |
34058970 |
tgagatgaactttttactcttccactttcactataaatacctacacccttgtcttaagttactcacaagcaaaccaaaaatatttcacttagcaactaaa |
34059069 |
T |
|
| Q |
112 |
tatgaattactcaccttccttggccttctaaactagtatcaccttctagctttcatttcatcatcttaaagtaaaaatattaagttggaagttgtgcatc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34059070 |
tatgaattactcaccttccttggccttctaaactagtatcaccttctagctttcatttcatcatcttaaagtaaaaatattaagttggaagttgtgcatc |
34059169 |
T |
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| Q |
212 |
c |
212 |
Q |
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| T |
34059170 |
c |
34059170 |
T |
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