View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17898_low_29 (Length: 254)

Name: NF17898_low_29
Description: NF17898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17898_low_29
NF17898_low_29
[»] chr3 (23 HSPs)
chr3 (75-254)||(16744086-16744265)
chr3 (75-225)||(2449238-2449388)
chr3 (76-225)||(17912483-17912631)
chr3 (93-254)||(14842532-14842693)
chr3 (93-254)||(13839025-13839186)
chr3 (93-251)||(12030121-12030279)
chr3 (93-235)||(51158008-51158150)
chr3 (93-251)||(2049941-2050099)
chr3 (93-251)||(15858996-15859156)
chr3 (93-218)||(15936634-15936759)
chr3 (93-225)||(13975722-13975853)
chr3 (93-225)||(45860937-45861068)
chr3 (78-225)||(13954890-13955036)
chr3 (93-218)||(15938476-15938601)
chr3 (163-254)||(19231982-19232075)
chr3 (179-252)||(19260796-19260869)
chr3 (93-213)||(55316351-55316471)
chr3 (78-191)||(16821256-16821369)
chr3 (93-213)||(41270207-41270327)
chr3 (101-181)||(15614973-15615053)
chr3 (168-209)||(14080715-14080756)
chr3 (128-218)||(11986173-11986263)
chr3 (146-218)||(54651642-54651714)
[»] scaffold0141 (2 HSPs)
scaffold0141 (75-225)||(26908-27058)
scaffold0141 (75-218)||(22653-22796)
[»] scaffold0124 (1 HSPs)
scaffold0124 (75-225)||(1582-1732)
[»] scaffold0078 (1 HSPs)
scaffold0078 (75-225)||(37066-37216)
[»] chr4 (16 HSPs)
chr4 (75-225)||(10488675-10488825)
chr4 (75-225)||(16327926-16328076)
chr4 (75-225)||(26680313-26680463)
chr4 (93-254)||(122020-122181)
chr4 (93-252)||(15675060-15675221)
chr4 (129-254)||(54118213-54118340)
chr4 (93-252)||(10104221-10104382)
chr4 (93-254)||(13246561-13246724)
chr4 (78-225)||(13048221-13048368)
chr4 (163-252)||(33240901-33240992)
chr4 (97-198)||(31115764-31115865)
chr4 (78-209)||(10644336-10644467)
chr4 (78-213)||(47357771-47357906)
chr4 (129-209)||(40885570-40885650)
chr4 (193-252)||(31132545-31132606)
chr4 (168-208)||(13809511-13809551)
[»] chr2 (15 HSPs)
chr2 (75-225)||(14906440-14906590)
chr2 (75-225)||(19689401-19689551)
chr2 (75-225)||(23820184-23820334)
chr2 (75-225)||(20015124-20015274)
chr2 (94-254)||(462870-463030)
chr2 (93-254)||(20627284-20627445)
chr2 (93-254)||(36982410-36982573)
chr2 (93-251)||(19794676-19794836)
chr2 (93-254)||(8891373-8891536)
chr2 (93-225)||(17396653-17396784)
chr2 (93-225)||(25265390-25265522)
chr2 (129-254)||(43642926-43643053)
chr2 (93-252)||(24341360-24341521)
chr2 (94-175)||(7507894-7507975)
chr2 (93-213)||(19886661-19886781)
[»] chr8 (17 HSPs)
chr8 (75-225)||(5238200-5238350)
chr8 (75-225)||(22907214-22907364)
chr8 (75-225)||(24661248-24661398)
chr8 (75-225)||(43685659-43685809)
chr8 (93-254)||(16193687-16193848)
chr8 (93-254)||(24928762-24928923)
chr8 (93-251)||(43373440-43373600)
chr8 (129-254)||(16404944-16405071)
chr8 (93-213)||(6774258-6774378)
chr8 (93-225)||(17345700-17345832)
chr8 (93-209)||(21844576-21844692)
chr8 (93-213)||(24549113-24549233)
chr8 (93-209)||(21851969-21852085)
chr8 (93-213)||(30120854-30120974)
chr8 (93-213)||(16674392-16674512)
chr8 (168-209)||(23149985-23150026)
chr8 (168-209)||(23226076-23226117)
[»] chr7 (21 HSPs)
chr7 (75-225)||(11516340-11516490)
chr7 (75-225)||(15441564-15441714)
chr7 (75-225)||(30262129-30262279)
chr7 (75-225)||(7293129-7293279)
chr7 (93-251)||(16211897-16212055)
chr7 (93-254)||(13036983-13037146)
chr7 (93-254)||(11580707-11580871)
chr7 (97-254)||(3060101-3060258)
chr7 (93-251)||(36052795-36052955)
chr7 (94-225)||(47481031-47481162)
chr7 (93-218)||(18253842-18253967)
chr7 (93-225)||(25292338-25292470)
chr7 (128-224)||(13321182-13321278)
chr7 (93-207)||(16478968-16479082)
chr7 (93-209)||(13572808-13572924)
chr7 (93-213)||(10989541-10989661)
chr7 (94-214)||(2437590-2437710)
chr7 (101-213)||(13911024-13911136)
chr7 (183-225)||(14113989-14114031)
chr7 (183-225)||(14423639-14423681)
chr7 (97-253)||(295936-296094)
[»] chr5 (23 HSPs)
chr5 (75-225)||(16536310-16536460)
chr5 (75-225)||(20623082-20623232)
chr5 (75-225)||(21233528-21233678)
chr5 (75-225)||(37052857-37053007)
chr5 (79-223)||(25900408-25900552)
chr5 (93-251)||(23507096-23507254)
chr5 (94-252)||(18531038-18531198)
chr5 (93-254)||(27182516-27182679)
chr5 (93-252)||(22053804-22053965)
chr5 (93-225)||(34939408-34939540)
chr5 (93-213)||(29188284-29188404)
chr5 (95-209)||(27009975-27010089)
chr5 (78-213)||(22366481-22366616)
chr5 (93-210)||(43443398-43443515)
chr5 (78-210)||(18777995-18778127)
chr5 (93-213)||(19500031-19500151)
chr5 (93-213)||(25426760-25426880)
chr5 (78-213)||(4199985-4200120)
chr5 (93-213)||(12506-12626)
chr5 (93-213)||(21073595-21073715)
chr5 (128-218)||(32950861-32950951)
chr5 (168-209)||(21310709-21310750)
chr5 (168-209)||(23981516-23981557)
[»] chr1 (15 HSPs)
chr1 (75-225)||(51452605-51452755)
chr1 (93-254)||(41394353-41394514)
chr1 (78-254)||(20931461-20931637)
chr1 (93-254)||(20913161-20913322)
chr1 (129-254)||(20445846-20445973)
chr1 (93-254)||(20893595-20893758)
chr1 (129-254)||(37844419-37844546)
chr1 (129-254)||(20531611-20531738)
chr1 (93-213)||(2116386-2116506)
chr1 (93-213)||(45051554-45051674)
chr1 (94-214)||(22227941-22228061)
chr1 (94-214)||(22232638-22232758)
chr1 (93-213)||(5072388-5072508)
chr1 (93-213)||(18601118-18601238)
chr1 (168-209)||(22143361-22143402)
[»] scaffold0266 (2 HSPs)
scaffold0266 (93-254)||(1255-1416)
scaffold0266 (93-254)||(3553-3714)
[»] scaffold0175 (1 HSPs)
scaffold0175 (78-254)||(927-1103)
[»] scaffold0023 (2 HSPs)
scaffold0023 (93-254)||(48729-48890)
scaffold0023 (78-191)||(36210-36323)
[»] scaffold0413 (1 HSPs)
scaffold0413 (93-254)||(6035-6196)
[»] scaffold0018 (1 HSPs)
scaffold0018 (93-254)||(51153-51314)
[»] scaffold0302 (1 HSPs)
scaffold0302 (78-251)||(12229-12403)
[»] scaffold0195 (2 HSPs)
scaffold0195 (93-254)||(19337-19500)
scaffold0195 (93-225)||(21421-21553)
[»] scaffold0106 (1 HSPs)
scaffold0106 (93-254)||(41860-42021)
[»] scaffold0077 (1 HSPs)
scaffold0077 (78-251)||(36885-37060)
[»] scaffold0001 (2 HSPs)
scaffold0001 (78-254)||(172021-172197)
scaffold0001 (78-254)||(177724-177900)
[»] chr6 (14 HSPs)
chr6 (94-254)||(14626089-14626249)
chr6 (93-254)||(23153578-23153741)
chr6 (93-225)||(1657748-1657880)
chr6 (93-225)||(35009439-35009571)
chr6 (93-225)||(15862602-15862734)
chr6 (93-213)||(1650105-1650225)
chr6 (78-213)||(25175680-25175815)
chr6 (78-213)||(27653983-27654118)
chr6 (142-225)||(27751605-27751688)
chr6 (128-225)||(29666040-29666137)
chr6 (88-213)||(16825752-16825879)
chr6 (168-209)||(16887792-16887833)
chr6 (168-209)||(33324898-33324939)
chr6 (168-209)||(35136013-35136054)
[»] scaffold0008 (2 HSPs)
scaffold0008 (129-254)||(128140-128265)
scaffold0008 (101-191)||(31697-31787)
[»] scaffold0162 (2 HSPs)
scaffold0162 (95-254)||(26385-26545)
scaffold0162 (93-225)||(8180-8312)
[»] scaffold0218 (1 HSPs)
scaffold0218 (93-254)||(5031-5193)
[»] scaffold0772 (1 HSPs)
scaffold0772 (93-218)||(5660-5785)
[»] scaffold0025 (3 HSPs)
scaffold0025 (93-251)||(148852-149012)
scaffold0025 (93-224)||(8980-9111)
scaffold0025 (199-254)||(146838-146893)
[»] scaffold0011 (1 HSPs)
scaffold0011 (93-254)||(123133-123296)
[»] scaffold0132 (1 HSPs)
scaffold0132 (78-225)||(13622-13769)
[»] scaffold0049 (1 HSPs)
scaffold0049 (93-218)||(48318-48443)
[»] scaffold0028 (3 HSPs)
scaffold0028 (129-254)||(89423-89550)
scaffold0028 (174-254)||(107753-107835)
scaffold0028 (168-209)||(79745-79786)
[»] scaffold0498 (1 HSPs)
scaffold0498 (93-254)||(9009-9170)
[»] scaffold1542 (1 HSPs)
scaffold1542 (129-225)||(534-630)
[»] scaffold0012 (1 HSPs)
scaffold0012 (93-254)||(247411-247574)
[»] scaffold0009 (1 HSPs)
scaffold0009 (78-254)||(272141-272317)
[»] scaffold0125 (1 HSPs)
scaffold0125 (94-225)||(41780-41911)
[»] scaffold0026 (3 HSPs)
scaffold0026 (93-218)||(107878-108003)
scaffold0026 (93-209)||(64527-64648)
scaffold0026 (168-210)||(89863-89905)
[»] scaffold0075 (1 HSPs)
scaffold0075 (129-225)||(34460-34556)
[»] scaffold0420 (1 HSPs)
scaffold0420 (93-213)||(13325-13445)
[»] scaffold0116 (1 HSPs)
scaffold0116 (93-209)||(167-283)
[»] scaffold0215 (2 HSPs)
scaffold0215 (93-191)||(9371-9469)
scaffold0215 (93-191)||(16269-16367)
[»] scaffold0529 (1 HSPs)
scaffold0529 (93-214)||(3094-3215)
[»] scaffold0076 (1 HSPs)
scaffold0076 (78-190)||(43114-43226)
[»] scaffold0022 (2 HSPs)
scaffold0022 (94-175)||(5254-5335)
scaffold0022 (168-208)||(102923-102963)
[»] scaffold1711 (1 HSPs)
scaffold1711 (93-213)||(1304-1424)
[»] scaffold0139 (2 HSPs)
scaffold0139 (93-191)||(14083-14181)
scaffold0139 (96-214)||(21115-21233)
[»] scaffold0361 (1 HSPs)
scaffold0361 (132-225)||(3360-3453)
[»] scaffold0369 (1 HSPs)
scaffold0369 (94-175)||(3854-3936)
[»] scaffold0084 (1 HSPs)
scaffold0084 (128-218)||(56106-56196)
[»] scaffold0456 (2 HSPs)
scaffold0456 (168-209)||(1546-1587)
scaffold0456 (168-209)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (168-209)||(8216-8257)
[»] scaffold0058 (1 HSPs)
scaffold0058 (168-209)||(70307-70348)
[»] scaffold0409 (2 HSPs)
scaffold0409 (171-209)||(1348-1386)
scaffold0409 (171-209)||(9603-9641)
[»] scaffold0151 (1 HSPs)
scaffold0151 (168-209)||(22422-22463)
[»] scaffold0032 (1 HSPs)
scaffold0032 (168-209)||(93773-93814)
[»] scaffold0389 (1 HSPs)
scaffold0389 (168-208)||(10868-10908)


Alignment Details
Target: chr3 (Bit Score: 156; Significance: 6e-83; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 75 - 254
Target Start/End: Complemental strand, 16744265 - 16744086
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||     
T  16744265 gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatgg 16744166  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16744165 atacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatt 16744086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 2449388 - 2449238
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  2449388 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 2449289  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2449288 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 76 - 225
Target Start/End: Complemental strand, 17912631 - 17912483
Alignment:
Q  76 tcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgca 175  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||||||| |||| |||||||||||||    
T  17912631 tcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 17912532  T
Q  176 tacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  17912531 tacaaacatatcatc-aagttggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 14842693 - 14842532
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||||||||| ||||||| ||| |||  |||||| ||| | ||||||||||||||| ||||  ||||||||||||||||||||||||||||     
T  14842693 gcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcac 14842594  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  14842593 agttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatt 14842532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 13839025 - 13839186
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||| | |||| |||||||||| |||| |||||||||||||||||||||||||||||     
T  13839025 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcac 13839124  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  13839125 agttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatt 13839186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 93 - 251
Target Start/End: Complemental strand, 12030279 - 12030121
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||| ||||| ||||| ||| ||| |||||||  |||||||||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  12030279 gcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 12030180  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaa 251  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  12030179 agttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaa 12030121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 51158150 - 51158008
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  51158150 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 51158051  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaatt 235  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  51158050 agttggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 93 - 251
Target Start/End: Original strand, 2049941 - 2050099
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| || || |||| || |||||||  |||||||||| | |||||||||| |||| |||| ||||||||| ||||||||||||||| |||     
T  2049941 gcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcac 2050040  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaa 251  Q
    |||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||    
T  2050041 agttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaa 2050099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 93 - 251
Target Start/End: Complemental strand, 15859156 - 15858996
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   ||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  15859156 gcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 15859057  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 251  Q
    |||||||||||||||||||||||||| |||||| ||   ||||||||||||||| ||||||    
T  15859056 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaa 15858996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 15936759 - 15936634
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| |     
T  15936759 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 15936660  T
Q  193 agttggagcacgaatttagcaacaat 218  Q
    ||||||||||||||||||| ||||||    
T  15936659 agttggagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 13975853 - 13975722
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| || |||| |||||||||||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13975755  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||| ||||||    
T  13975754 agttggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 45860937 - 45861068
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| || |||| |||||||||||   ||||||||||||||| | || | |||||||||||||||| |||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 45861035  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||| ||||||    
T  45861036 agttggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 13955036 - 13954890
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||||| |||  ||||||| |||||||||  ||||||| || |||| |||||||||||   ||||||||||||||| | || | |||||||||||||    
T  13955036 aaattcatcaattgagcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 13954937  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  13954936 caa-catatcatcaaagttggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 15938601 - 15938476
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||| | ||||||||||||||| |||| |||||||||||  |||||||||||||| |     
T  15938601 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattac 15938502  T
Q  193 agttggagcacgaatttagcaacaat 218  Q
    |||||||||||| |||||| ||||||    
T  15938501 agttggagcacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 19231982 - 19232075
Alignment:
Q  163 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 19232075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 19260869 - 19260796
Alignment:
Q  179 aaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa 252  Q
    ||||||||||||| | || ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaa 19260796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  55316451 agcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 16821256 - 16821369
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||  ||||| |||  |||||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||| |||||||    
T  16821256 aaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcata 16821355  T
Q  178 caaacatatcatca 191  Q
    |||||||| |||||    
T  16821356 caaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   ||||||||||   |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  41270307 agcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 15614973 - 15615053
Alignment:
Q  101 ttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaa 181  Q
    |||| ||||| ||||||| |||||||  |||||||||| | |||||||||| |||| |||| |||||||||||||||||||    
T  15614973 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaa 15615053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 11986263 - 11986173
Alignment:
Q  128 aaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 218  Q
    ||||||||||| | | | ||||||||||| |||| || || ||||||| || || ||| ||||| |||| ||||||||||||| |||||||    
T  11986263 aaacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 54651642 - 54651714
Alignment:
Q  146 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 218  Q
    ||||||||||| |||| ||||||||||||| |  || ||| ||||| ||   |||||||||||||||||||||    
T  54651642 acaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaat 54651714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 139; Significance: 8e-73; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 26908 - 27058
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  26908 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 27007  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27008 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 75 - 218
Target Start/End: Original strand, 22653 - 22796
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  22653 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 22752  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaat 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22753 atacaaacatatcatcaaagttggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 1732 - 1582
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  1732 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 1633  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1632 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 37216 - 37066
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  37216 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 37117  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37116 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 8e-73; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 10488675 - 10488825
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  10488675 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 10488774  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10488775 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 16328076 - 16327926
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  16328076 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 16327977  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16327976 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 26680313 - 26680463
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  26680313 gtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 26680412  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26680413 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 122020 - 122181
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    ||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  122120 agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatt 122181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 252
Target Start/End: Complemental strand, 15675221 - 15675060
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  15675221 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 15675122  T
Q  193 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa 252  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| |||||||||||    
T  15675121 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaa 15675060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 54118340 - 54118213
Alignment:
Q  129 aacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 228  Q
    |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||    
T  54118340 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattat 54118241  T
Q  229 --caaaattcatacaacatttgaaaatt 254  Q
       |||||||||||||||||||||||||    
T  54118240 gcaaaaattcatacaacatttgaaaatt 54118213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 93 - 252
Target Start/End: Complemental strand, 10104382 - 10104221
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  10104382 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 10104283  T
Q  193 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa 252  Q
    |||||||||||| ||||||||||||| |||||  ||   ||||||||||| |||||||||||    
T  10104282 agttggagcacggatttagcaacaattatccaattatgaaaaattcataccacatttgaaaa 10104221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 13246561 - 13246724
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||| | ||||||||||||||| |||| || ||||||||||||||||||||||||||     
T  13246561 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcac 13246660  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    ||||| |||||||||||| ||||||| |||||| ||   |||||||||||||||||||||||||    
T  13246661 agttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatt 13246724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 13048368 - 13048221
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||||| |||  ||||||| |||||||||| || |||| ||||||| ||||||||||| | ||||||||||||||| | || ||||| |||||||||    
T  13048368 aaattcatcaattgagcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcata 13048269  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  13048268 caaacatatcattgaagttggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 33240901 - 33240992
Alignment:
Q  163 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa 252  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||   ||||||||||| |||||||||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaa 33240992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 31115764 - 31115865
Alignment:
Q  97 aattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 196  Q
    |||||||| |||||  |||||| ||||| |  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  31115764 aattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagtt 31115863  T
Q  197 gg 198  Q
    ||    
T  31115864 gg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 209
Target Start/End: Original strand, 10644336 - 10644467
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||| | || |||||||||||| |||| |||||||||||||||    
T  10644336 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcata 10644435  T
Q  178 caaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||| ||||| ||   ||||||||||||    
T  10644436 caaacataacatcacagcaagagcacgaattt 10644467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 47357771 - 47357906
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||| | ||||||||| |||||  ||  |||||| ||||||||    
T  47357771 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcata 47357870  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| ||||| ||   ||||||||||||||||    
T  47357871 caaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 40885650 - 40885570
Alignment:
Q  129 aacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||| | |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||| ||||||||    
T  40885650 aacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 31132545 - 31132606
Alignment:
Q  193 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa 252  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| |||||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaa 31132606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  13809551 ttcatgcattcaaacatatcatcataattggagcacgaatt 13809511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 8e-73; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 14906590 - 14906440
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  14906590 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 14906491  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14906490 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 19689551 - 19689401
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  19689551 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 19689452  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19689451 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 23820184 - 23820334
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  23820184 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 23820283  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23820284 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 20015124 - 20015274
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  20015124 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgc 20015223  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20015224 atgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 94 - 254
Target Start/End: Original strand, 462870 - 463030
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||| | |||||||||| |||| |||| ||||||||||||||||||| ||||||||| |    
T  462870 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcaca 462969  T
Q  194 gttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  462970 gttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatt 463030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 20627445 - 20627284
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| || || ||||||| |||||||   ||||||||| | ||||||||||||||| |||| |||||||| ||||||||||||||||||||     
T  20627445 gcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcac 20627346  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||||    
T  20627345 agttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaatt 20627284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 36982573 - 36982410
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | |||| ||||| |||| |||| ||||||||||| |||||||||||||||||     
T  36982573 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcac 36982474  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  36982473 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 36982410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 93 - 251
Target Start/End: Complemental strand, 19794836 - 19794676
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  19794836 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcac 19794737  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 251  Q
    |||||||||||||||||| | ||||| |||||| ||   ||||||||||||||||||||||    
T  19794736 agttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttgaaa 19794676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 8891373 - 8891536
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||| |  |||||||||||||| |||| |||||||||||||||||||||||| ||||     
T  8891373 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcac 8891472  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  8891473 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 8891536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 17396784 - 17396653
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| || |||| ||||||||||| | ||||||||||||||| | || | |||||||||||||| |||||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa 17396686  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||| ||||||    
T  17396685 agttggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 25265522 - 25265390
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  25265522 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaa 25265423  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    |||| ||||||||||||||||||||| ||||||    
T  25265422 agttagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 43643053 - 43642926
Alignment:
Q  129 aacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 228  Q
    |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||  ||    
T  43643053 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatccactat 43642954  T
Q  229 --caaaattcatacaacatttgaaaatt 254  Q
       |||||||||||||||||||||||||    
T  43642953 gcaaaaattcatacaacatttgaaaatt 43642926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 93 - 252
Target Start/End: Complemental strand, 24341521 - 24341360
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  ||||| |||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  24341521 gcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 24341422  T
Q  193 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa 252  Q
    ||||| |||| ||||||||||||||| |||||  ||   ||||||||||| |||||||||||    
T  24341421 agttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaa 24341360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 7507975 - 7507894
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgca 175  Q
    ||||||||||||||||| | ||||| |||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||    
T  7507975 cacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 19886781 - 19886661
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||| |||  |||||   |||||||||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  19886781 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19886682  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  19886681 agcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 5238200 - 5238350
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  5238200 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 5238299  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5238300 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 22907364 - 22907214
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  22907364 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 22907265  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22907264 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 24661398 - 24661248
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  24661398 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 24661299  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24661298 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 43685659 - 43685809
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  43685659 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 43685758  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43685759 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 16193848 - 16193687
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| |  |||||||||||||| |||| |||||||||||||||||||||||||||||     
T  16193848 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcat 16193749  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  16193748 agttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatt 16193687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 24928923 - 24928762
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||| ||||     
T  24928923 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcac 24928824  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24928823 agttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatt 24928762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 93 - 251
Target Start/End: Complemental strand, 43373600 - 43373440
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||| | |||| |||||||||||||||||||| ||||||||     
T  43373600 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcac 43373501  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 251  Q
    |||||||||||||||||||||  ||| |||||| ||   ||||||||||||||||||||||    
T  43373500 agttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaa 43373440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 16405071 - 16404944
Alignment:
Q  129 aacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 228  Q
    |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||    
T  16405071 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcat 16404972  T
Q  229 --caaaattcatacaacatttgaaaatt 254  Q
       |||||||||||||||||||||||||    
T  16404971 gcaaaaattcatacaacatttgaaaatt 16404944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 6774378 - 6774258
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  6774378 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 6774279  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  |||||||||| |||||    
T  6774278 agtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 17345700 - 17345832
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||| ||||| |  ||||||| || | ||||||||||||||| |||| ||||||||||||||| ||||||| |||||     
T  17345700 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcac 17345799  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    |||| |||||||||||| |||||||| ||||||    
T  17345800 agttagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 21844692 - 21844576
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| ||||||| ||||||||||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21844593  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  21844592 agcaagagcacgaattt 21844576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 24549113 - 24549233
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  24549113 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 24549212  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  |||||||||| |||||    
T  24549213 agtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 21852085 - 21851969
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| ||||||| |||||| |||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 21851986  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  21851985 agcaagagcacgaattt 21851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 30120854 - 30120974
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||| | |||||||||||||||  ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  30120954 agcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||| | |||||||||||||||  ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  16674412 agaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||||| |||||||||||||| | |||||||||||||||    
T  23149985 ttcatgcattcaaacatatcatcataattggagcacgaattt 23150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 11516340 - 11516490
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  11516340 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 11516439  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11516440 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 15441714 - 15441564
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  15441714 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 15441615  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15441614 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 30262279 - 30262129
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  30262279 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 30262180  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30262179 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 7293129 - 7293279
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  7293129 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgc 7293228  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7293229 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 93 - 251
Target Start/End: Original strand, 16211897 - 16212055
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||| ||| | || ||||||| |||| |||| |||||||||||||||||||||||||||||     
T  16211897 gcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 16211996  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaa 251  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  16211997 agttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaa 16212055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 13037146 - 13036983
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||| ||| | | ||||||||||||| |||| |||||||||||||||||||||||||||||     
T  13037146 gcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 13037047  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  13037046 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 13036983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 11580871 - 11580707
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||| ||||     
T  11580871 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcac 11580772  T
Q  193 agttggagcacgaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||| ||| |||||| ||    |||||||||||||||||||||||||    
T  11580771 agttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatt 11580707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 254
Target Start/End: Original strand, 3060101 - 3060258
Alignment:
Q  97 aattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 196  Q
    |||||||| || || ||||||| |||||||  |||||||||| | ||||||| |  |||| |||| ||||||| ||||||||||| |||| |||| ||||    
T  3060101 aattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagtt 3060200  T
Q  197 ggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  3060201 ggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatt 3060258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 93 - 251
Target Start/End: Original strand, 36052795 - 36052955
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||| | |||| |||||||||||||||||||| ||||||||     
T  36052795 gcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcac 36052894  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 251  Q
    |||||||| |  |||||||||||||| |||||| ||   ||||||||||||||||||||||    
T  36052895 agttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaa 36052955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 225
Target Start/End: Complemental strand, 47481162 - 47481031
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||| ||||| ||||||| |||||||  |||||||||| | || |||||||||||| |||| ||||||||||||||||||||||| ||||| |    
T  47481162 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 47481063  T
Q  194 gttggagcacgaatttagcaacaatcatccat 225  Q
    ||| ||||||||||||||||||||| ||||||    
T  47481062 gttagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 18253967 - 18253842
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| |     
T  18253967 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 18253868  T
Q  193 agttggagcacgaatttagcaacaat 218  Q
    ||||||||||||||||||| ||||||    
T  18253867 agttggagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 25292470 - 25292338
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||| ||| || |||| ||||||| ||||||||||| | ||||||||||||||| | || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    ||||||||||| |||||||||||||| ||||||    
T  25292370 agttggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 224
Target Start/End: Original strand, 13321182 - 13321278
Alignment:
Q  128 aaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca 224  Q
    ||||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||    
T  13321182 aaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 16479082 - 16478968
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||      
T  16479082 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcgc 16478983  T
Q  193 agttggagcacgaat 207  Q
    |||  ||||||||||    
T  16478982 agtaagagcacgaat 16478968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 13572808 - 13572924
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||||||| ||||||| ||||||||||| | ||||||||||| ||| | || ||||||||||||||||||||||| |||||     
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcac 13572907  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  13572908 agcaagagcacgaattt 13572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 10989541 - 10989661
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  10989641 agcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 2437590 - 2437710
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 193  Q
    |||||| |||||||||| |||||||  |||||   |||||||||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| |    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca 2437689  T
Q  194 gttggagcacgaatttagcaa 214  Q
        |||||||||||||||||    
T  2437690 acaagagcacgaatttagcaa 2437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 13911136 - 13911024
Alignment:
Q  101 ttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 200  Q
    |||||||||| |||||||  |||||   |||||||||| | ||||||||||||||| |||  ||||||||||||||||||||||| ||||| |    |||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagag 13911037  T
Q  201 cacgaatttagca 213  Q
    |||||||||||||    
T  13911036 cacgaatttagca 13911024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  183 atatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  183 atatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 253
Target Start/End: Complemental strand, 296094 - 295936
Alignment:
Q  97 aattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 196  Q
    |||||| ||||||| ||||||| ||||| |  |||||| ||| | |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  197 ggagcacgaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaat 253  Q
     || |||||||||||||||||| || ||| || ||||| |||||||||  |||||||||    
T  295994 agaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaat 295936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 16536310 - 16536460
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  16536310 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgc 16536409  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16536410 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 20623082 - 20623232
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  20623082 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 20623181  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20623182 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 21233678 - 21233528
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  21233678 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 21233579  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21233578 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 37052857 - 37053007
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  37052857 gtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 37052956  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37052957 atacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 25900552 - 25900408
Alignment:
Q  79 aattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatac 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||    
T  25900552 aattcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatac 25900453  T
Q  179 aaacatatcatcaaagttggagcacgaatttagcaacaatcatcc 223  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  25900452 aaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 93 - 251
Target Start/End: Original strand, 23507096 - 23507254
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  23507096 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 23507195  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaa 251  Q
    |  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  23507196 aaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaa 23507254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 94 - 252
Target Start/End: Complemental strand, 18531198 - 18531038
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||| |||||  |||||| ||||| |  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |    
T  18531198 cacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaca 18531099  T
Q  194 gttggagcacgaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaa 252  Q
    ||||||||||||||||||||||||| |||| || || ||| |||||||| |||||||||||    
T  18531098 gttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaa 18531038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 27182679 - 27182516
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||| | | ||||||||||||| |||| |||| ||||||||||||||||||||||||     
T  27182679 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcac 27182580  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    |||||||||| ||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  27182579 agttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 27182516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 252
Target Start/End: Complemental strand, 22053965 - 22053804
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||| | |||||||||||||||  ||| |||||||||| ||||||||||||||||||     
T  22053965 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcac 22053866  T
Q  193 agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa 252  Q
    |||||||||||||||||||||||||| |||||  ||   ||||||||||| |||||||||||    
T  22053865 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaa 22053804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 34939408 - 34939540
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||| ||||| |  ||||||| || | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  34939408 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 34939507  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    |||| ||||||||||||||||||| | ||||||    
T  34939508 agttagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  |||||||||| |||||    
T  29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 27009975 - 27010089
Alignment:
Q  95 acaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 194  Q
    ||||| |||||||||| ||||||| ||||||| ||||||||||| | ||||||| ||||||| | || ||||||||||||||||||||||| ||||| ||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag 27010074  T
Q  195 ttggagcacgaattt 209  Q
       ||||||||||||    
T  27010075 caagagcacgaattt 27010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 22366616 - 22366481
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||| | ||||||||| |||||  ||  |||||||||||||||    
T  22366616 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 22366517  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| ||||| ||   ||||||||||||||||    
T  22366516 caaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 43443515 - 43443398
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 43443416  T
Q  193 agttggagcacgaattta 210  Q
    ||   |||||||||||||    
T  43443415 agcaagagcacgaattta 43443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 210
Target Start/End: Complemental strand, 18778127 - 18777995
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||| | ||||||||| |||||  ||  |||||||||||||||    
T  18778127 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 18778028  T
Q  178 caaacatatcatcaaagttggagcacgaattta 210  Q
    |||||||| ||||| ||   |||||||||||||    
T  18778027 caaacataacatcacagcaagagcacgaattta 18777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 19500031 - 19500151
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  19500031 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19500130  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  19500131 agcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 25426760 - 25426880
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  25426760 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 25426859  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  25426860 agcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 4200120 - 4199985
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| ||| ||| |||||||||| |||||||  |||||   |||||||||| | |||||||||||||||  ||  |||||||||||||||    
T  4200120 aaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 4200021  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| ||||| |    ||||||||||||||||    
T  4200020 caaacataacatcacaacaagagcacgaatttagca 4199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 12506 - 12626
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| ||| |||  |||||   |||||||||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||     
T  12506 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 12605  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  12606 agcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 21073715 - 21073595
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||| | ||||||||| |||||  ||  ||| ||||||||||||||||||| |||||     
T  21073715 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcac 21073616  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  21073615 agcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 32950861 - 32950951
Alignment:
Q  128 aaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 218  Q
    ||||||||||| | | | ||||||||||| |||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| |||||||    
T  32950861 aaacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 21310750 - 21310709
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
T  21310750 ttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  23981557 ttcatgcatacaaacatatcatcataattagagcacgaattt 23981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 5e-68; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 75 - 225
Target Start/End: Original strand, 51452605 - 51452755
Alignment:
Q  75 gtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  51452605 gtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgc 51452704  T
Q  175 atacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  51452705 atacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 41394353 - 41394514
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||  | ||||||||||||||| |||| ||||||| |||||||||||||||||||||     
T  41394353 gcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcat 41394452  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394453 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 41394514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 78 - 254
Target Start/End: Original strand, 20931461 - 20931637
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||||||||| ||||||| ||||||   |||||||||| | |||||||||| |||| |||| |||||||||||||||    
T  20931461 aaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 20931560  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||    
T  20931561 caaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatt 20931637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 20913161 - 20913322
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||||||||| ||||||| ||||||   |||||||||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  20913161 gcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 20913260  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||    
T  20913261 agttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatt 20913322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 20445846 - 20445973
Alignment:
Q  129 aacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 228  Q
    |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||    
T  20445846 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattat 20445945  T
Q  229 --caaaattcatacaacatttgaaaatt 254  Q
       |||||||||||||||||||||||||    
T  20445946 gcaaaaattcatacaacatttgaaaatt 20445973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 20893758 - 20893595
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||| | | ||||||||||||| |||| |||||||||||||||||||||||||||||     
T  20893758 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 20893659  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    |||||||||| ||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  20893658 agttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 20893595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 37844546 - 37844419
Alignment:
Q  129 aacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 228  Q
    |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||    
T  37844546 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattat 37844447  T
Q  229 --caaaattcatacaacatttgaaaatt 254  Q
       |||||||||||||||||||||||||    
T  37844446 gcaaaaattcatacaacatttgaaaatt 37844419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 20531611 - 20531738
Alignment:
Q  129 aacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 228  Q
    |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| ||    
T  20531611 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattat 20531710  T
Q  229 --caaaattcatacaacatttgaaaatt 254  Q
       |||||||||||||||||||||||||    
T  20531711 gcaaaaattcatacaacatttgaaaatt 20531738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 2116386 - 2116506
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  2116386 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 2116485  T
Q  193 agttggagcacgaatttagca 213  Q
    |||   ||||||||| |||||    
T  2116486 agtaaaagcacgaatctagca 2116506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 45051554 - 45051674
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  || ||||||| |||||    
T  45051654 agtaagaacacgaatctagca 45051674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 22227941 - 22228061
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||| | || |||||||||||| |||| ||||||||||||| |  || ||| ||||| |    
T  22227941 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22228040  T
Q  194 gttggagcacgaatttagcaa 214  Q
    |   |||||||||||||||||    
T  22228041 gcaagagcacgaatttagcaa 22228061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 22232638 - 22232758
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||| | || |||||||||||| |||| ||||||||||||| |  || ||| ||||| |    
T  22232638 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22232737  T
Q  194 gttggagcacgaatttagcaa 214  Q
    |   |||||||||||||||||    
T  22232738 gcaagagcacgaatttagcaa 22232758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||| | |||||||||||||||  ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  5072408 agcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 18601238 - 18601118
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 18601139  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||| ||||||||||    
T  18601138 agcaagagcatgaatttagca 18601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  22143402 ttcatgcatacaaacacatcatcatagttagagcacgaattt 22143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 1255 - 1416
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  1255 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaa 1354  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  1355 agttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatt 1416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 3714 - 3553
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  3714 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 3615  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  3614 agttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatt 3553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 78 - 254
Target Start/End: Complemental strand, 1103 - 927
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||||| |||  |||||||||||| ||||| | ||||| |||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||    
T  1103 aaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 1004  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  1003 caaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatt 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 48729 - 48890
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| |||||||  | ||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  48729 gcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 48828  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  48829 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatt 48890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 36210 - 36323
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   || ||||||| | |||||||||||||||  ||  |||||||||| ||||    
T  36210 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacata 36309  T
Q  178 caaacatatcatca 191  Q
    |||||||| |||||    
T  36310 caaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 6196 - 6035
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||| | ||||| | ||||| |||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  6196 gcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 6097  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  6096 agttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatt 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 51314 - 51153
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| || ||||  |||||||||| | |||||||||| |||| |||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  51214 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatt 51153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 12229 - 12403
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||| ||| ||| ||||||||| | | ||||||||||||||| |||| |||||||||||||||    
T  12229 aaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcata 12328  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaa 251  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||    
T  12329 caaacatatcatcacagttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttgaaa 12403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 19337 - 19500
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  19337 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 19436  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  19437 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 19500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 21421 - 21553
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  21421 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 21520  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||||||||||||||||||| ||||||    
T  21521 agttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 41860 - 42021
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| || || ||||||| |||||||  | |||||||| | |||||||||   ||| |||| |||||||||||||||||||||||||||||     
T  41860 gcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcac 41959  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  41960 agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatt 42021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 78 - 251
Target Start/End: Complemental strand, 37060 - 36885
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||| |||||||  |||||||||| | |||||||| | |||| |||| |||||||||||||||    
T  37060 aaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcata 36961  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 251  Q
    |||||||||||||| |||||||||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||    
T  36960 caaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaa 36885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 78 - 254
Target Start/End: Original strand, 172021 - 172197
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||  |||||||||| | |||| |||||||||| |||| |||||||||| ||||    
T  172021 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccata 172120  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  172121 caaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatt 172197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 78 - 254
Target Start/End: Original strand, 177724 - 177900
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||  |||||||||| | |||| |||||||||| |||| |||||||||| ||||    
T  177724 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccata 177823  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  177824 caaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatt 177900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 14626249 - 14626089
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |    
T  14626249 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 14626150  T
Q  194 gttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |   ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| ||||    
T  14626149 gcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatt 14626089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 23153578 - 23153741
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  23153578 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 23153677  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    ||||||||||||||||||| |||||| |||||| ||   |||||||||||||||||||||||||    
T  23153678 agttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatt 23153741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 1657880 - 1657748
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||| ||||| |  ||||||| || | ||||||||||||||| |||| |||||||||||||| |||||||| |||||     
T  1657880 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcac 1657781  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    |||| ||||||||||||||||||||| ||||||    
T  1657780 agttagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 35009571 - 35009439
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  35009571 gcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatcac 35009472  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    |||| ||||||||||||||||||||| ||||||    
T  35009471 agttagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 225
Target Start/End: Original strand, 15862602 - 15862734
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||||||||||||||  |||||  ||||| |  ||||||| || | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  15862602 gcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 15862701  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    |||| |||||||||||||| |||||| ||||||    
T  15862702 agttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 1650225 - 1650105
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||| | |||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||     
T  1650225 gcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 1650126  T
Q  193 agttggagcacgaatttagca 213  Q
    |||  |||||||||| |||||    
T  1650125 agtaagagcacgaatctagca 1650105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 25175680 - 25175815
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||| | ||||||||| |||||  ||  |||||||||||||||    
T  25175680 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 25175779  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    |||||||| || || ||   ||||||||||||||||    
T  25175780 caaacataacaacacagcaagagcacgaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 27654118 - 27653983
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  |||||   |||||||||| | ||||||||| |||||  ||  |||||||||||||||    
T  27654118 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 27654019  T
Q  178 caaacatatcatcaaagttggagcacgaatttagca 213  Q
    ||| |||| ||||| ||   ||||||||||||||||    
T  27654018 caagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  142 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 29666040 - 29666137
Alignment:
Q  128 aaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    ||||||||||| | ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | ||||||||||||| ||||||| ||||||    
T  29666040 aaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccat 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 213
Target Start/End: Complemental strand, 16825879 - 16825752
Alignment:
Q  88 attttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatca--tacacttattatcaattcatgcatacaaacata 185  Q
    |||| ||||||| |||||||||| |||||||  |||||   |||||||||| | ||||||||| |  ||||  ||  |||||||||||||||||||||||    
T  16825879 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacata 16825780  T
Q  186 tcatcaaagttggagcacgaatttagca 213  Q
     ||||| ||   ||||||||||||||||    
T  16825779 acatcacagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 16887833 - 16887792
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
T  16887833 ttcatgcatacaaacatattatcatagttagagcacgaattt 16887792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  33324898 ttcatgcatacaaacatatcatcctagttagagcacgaattt 33324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 35136054 - 35136013
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  35136054 ttcatgcatacaaacatatcatcctagttagagcacgaattt 35136013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 128265 - 128140
Alignment:
Q  129 aacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 228  Q
    |||||||||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||     
T  128265 aacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataag 128166  T
Q  229 caaaattcatacaacatttgaaaatt 254  Q
    ||||||||||||||| ||||||||||    
T  128165 caaaattcatacaacttttgaaaatt 128140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  101 ttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 191  Q
    |||||||||| |||||||  |||||   || ||||||| | |||||||||||||||  ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 95 - 254
Target Start/End: Complemental strand, 26545 - 26385
Alignment:
Q  95 acaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag 194  Q
    |||||||||| ||||| ||||||| |||||||  |||||||| | | ||||| |||| |||| |||| ||||||||| ||||||||||||||||||||||    
T  26545 acaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaag 26446  T
Q  195 ttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||    
T  26445 ttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatt 26385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 225
Target Start/End: Complemental strand, 8312 - 8180
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  ||| |||||| | ||||||||||||||| |||| | ||||||||||||||||||||| |||||     
T  8312 gcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcac 8213  T
Q  193 agttggagcacgaatttagcaacaatcatccat 225  Q
    |||| ||||||||||||||||||||| ||||||    
T  8212 agttagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 5193 - 5031
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||| | | |||||||||| |||| |||| ||||||||| ||||||||||||||| |||     
T  5193 gcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcac 5094  T
Q  193 agttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatt 254  Q
    |||||||| ||||||||||||||||| |||||| ||  |||||||||||||||||||||||||    
T  5093 agttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatt 5031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 93 - 218
Target Start/End: Original strand, 5660 - 5785
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| ||||| |||| ||||||| ||||||| ||||||||||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  193 agttggagcacgaatttagcaacaat 218  Q
    ||||||||||||||||||||||||||    
T  5760 agttggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 93 - 251
Target Start/End: Original strand, 148852 - 149012
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| |||||||  |||||||||| | |||||||||| |||| |||| |||||||||||||||||||||||||||||     
T  148852 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 148951  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 251  Q
    ||||||||||| |||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148952 agttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 224
Target Start/End: Original strand, 8980 - 9111
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  8980 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 9079  T
Q  193 agttggagcacgaatttagcaacaatcatcca 224  Q
    || ||||||||||||||||||||||| |||||    
T  9080 agatggagcacgaatttagcaacaattatcca 9111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 146838 - 146893
Alignment:
Q  199 agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatt 146893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 123296 - 123133
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  123296 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 123197  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    | |||||||||||||||||||||||| |||||| ||   ||||||||||||||||||| |||||    
T  123196 aattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatt 123133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 13622 - 13769
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||||| |||  |||||||||||| |||||  |||||| ||||| |  |||||||||| | ||||||||||||||| |||| |||||||||||||||    
T  13622 aaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 13721  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  13722 caaacataacatcaaagttagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 93 - 218
Target Start/End: Original strand, 48318 - 48443
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||| ||| |||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| |     
T  48318 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 48417  T
Q  193 agttggagcacgaatttagcaacaat 218  Q
    ||||||||||||||||||||||||||    
T  48418 agttggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 89550 - 89423
Alignment:
Q  129 aacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat 228  Q
    |||||||||| | ||||||||||||||| |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| ||    
T  89550 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccattat 89451  T
Q  229 --caaaattcatacaacatttgaaaatt 254  Q
       |||||||||| ||||||||||||||    
T  89450 gcaaaaattcatagaacatttgaaaatt 89423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 107835 - 107753
Alignment:
Q  174 catacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| |||||| ||   |||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatt 107753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 79745 - 79786
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  79745 ttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 9009 - 9170
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||| | |||||||||| |||| |||| ||| ||||||||||||||||||| |||||     
T  9009 gcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcac 9108  T
Q  193 agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |  |||||||||||||||||||||||  ||||||| |||||||| |||||| ||||||||||    
T  9109 aaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatt 9170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 630 - 534
Alignment:
Q  129 aacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  630 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 247574 - 247411
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| ||||| ||||||   | ||||  |||||| ||| | |||  |||||||||| |||| ||||||||||||||||||||||||||| |     
T  247574 gcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattac 247475  T
Q  193 agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt 254  Q
    |||||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||    
T  247474 agttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt 247411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 78 - 254
Target Start/End: Original strand, 272141 - 272317
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||  |||||||||| |  ||| |||||||||| |||| |||||||||| ||||    
T  272141 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcata 272240  T
Q  178 caaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 254  Q
    |||||||||||| | |||||||| ||| ||||||||| | | |||||||||||||||| |||||| |||||||||||    
T  272241 caaacatatcattacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatt 272317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 225
Target Start/End: Original strand, 41780 - 41911
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa 193  Q
    ||||||||||| |||||  |||||| ||||| |  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |    
T  41780 cacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 41879  T
Q  194 gttggagcacgaatttagcaacaatcatccat 225  Q
    ||| ||||||||||||| ||||||| ||||||    
T  41880 gttagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 218
Target Start/End: Original strand, 107878 - 108003
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||| | ||||| |||||||  || |||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| |     
T  107878 gcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 107977  T
Q  193 agttggagcacgaatttagcaacaat 218  Q
    ||||||||||||||||||| ||||||    
T  107978 agttggagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 64648 - 64527
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatc-----aattcatgcatacaaacatatc 187  Q
    ||||||| |||||||||| ||||||| ||||||| ||||||||||| | ||||||||||||||| | || |||     |||||||||||| ||||||| |    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataac 64549  T
Q  188 atcaaagttggagcacgaattt 209  Q
    |||| ||   ||||||||||||    
T  64548 atcacagcaagagcacgaattt 64527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattta 210  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 34556 - 34460
Alignment:
Q  129 aacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||| ||||||    
T  34556 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||     
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 13346  T
Q  193 agttggagcacgaatttagca 213  Q
    | |  |||||||||| |||||    
T  13345 actaagagcacgaatctagca 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 167 - 283
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| | |||||||| ||||||| ||||||| ||||||||||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||     
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac 266  T
Q  193 agttggagcacgaattt 209  Q
    ||   ||||||||||||    
T  267 agcaagagcacgaattt 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 9469 - 9371
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 191  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  9469 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 16367 - 16269
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 191  Q
    |||| ||||||| ||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  16367 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 3094 - 3215
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    |||||||||||| |||||  |||||| ||||| |  |||||||||| | ||||||||||||||| |||| ||||||||||| ||||||||||| |||||     
T  3094 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcac 3193  T
Q  193 agttggagcacgaatttagcaa 214  Q
    ||   |||||||||||||||||    
T  3194 agcaagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 43114 - 43226
Alignment:
Q  78 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcata 177  Q
    ||||||| | |||| ||||||| ||||||||||  |||||| |||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||    
T  43114 aaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 43213  T
Q  178 caaacatatcatc 190  Q
     ||||||| ||||    
T  43214 gaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 5335 - 5254
Alignment:
Q  94 cacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgca 175  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||    
T  5335 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    ||||||||| |||||||||||||| | ||||||||||||||    
T  102963 ttcatgcattcaaacatatcatcataattggagcacgaatt 102923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa 192  Q
    ||||||| |||||||||| |||||||  |||||   |||||||||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  193 agttggagcacgaatttagca 213  Q
    ||   ||||||||||||||||    
T  1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
Q  93 gcacaattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 191  Q
    ||||||| |||||||||| ||||||| |||||||  |||||||||| | || |||||||||| | |||| ||||||||||||||||| ||||| |||||    
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 21233 - 21115
Alignment:
Q  96 caattttcataacttttcattttcacatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 195  Q
    |||| |||||||||| ||||||| |||||||  |||||||||| | || |||||||||| | |||| ||||||| ||| ||||||||||| ||||| |      
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatcacaac 21134  T
Q  196 tggagcacgaatttagcaa 214  Q
      |||||||||||||||||    
T  21133 aagagcacgaatttagcaa 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 3360 - 3453
Alignment:
Q  132 atgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat 225  Q
    ||||||| | |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||| ||||||    
T  3360 atgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 3854 - 3936
Alignment:
Q  94 cacaattttcataacttttcattttc-acatattcaaacatgtaatctaaccaacaatcatacacttattatcaattcatgca 175  Q
    |||||||| |||||||| |||||||  |||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||    
T  3854 cacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 56196 - 56106
Alignment:
Q  128 aaacatgtaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat 218  Q
    ||||||||||| | | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| |||| ||||||||||||| |||||||    
T  56196 aaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 1386 - 1348
Alignment:
Q  171 atgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  1386 atgcatacaaacatatcatcatagttagagcacgaattt 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 9641 - 9603
Alignment:
Q  171 atgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  9641 atgcatacaaacatatcatcatagttagagcacgaattt 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 22463 - 22422
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  22463 ttcatgcatacaaacatatcatcatatttagagcacgaattt 22422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaattt 209  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  93814 ttcatgcatacatacatatcatcataattggagcacgaattt 93773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 10868 - 10908
Alignment:
Q  168 ttcatgcatacaaacatatcatcaaagttggagcacgaatt 208  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  10868 ttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

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