View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17898_low_8 (Length: 433)

Name: NF17898_low_8
Description: NF17898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17898_low_8
NF17898_low_8
[»] chr7 (34 HSPs)
chr7 (162-433)||(1560441-1560712)
chr7 (159-433)||(18391969-18392242)
chr7 (159-430)||(6594331-6594601)
chr7 (162-433)||(18388536-18388806)
chr7 (162-433)||(32060098-32060368)
chr7 (162-430)||(6592116-6592383)
chr7 (191-433)||(20344019-20344255)
chr7 (218-433)||(43503991-43504200)
chr7 (266-433)||(39731491-39731656)
chr7 (320-432)||(24789964-24790074)
chr7 (367-433)||(35854036-35854102)
chr7 (367-433)||(25766940-25767006)
chr7 (218-324)||(24790230-24790333)
chr7 (269-433)||(25615975-25616137)
chr7 (367-433)||(29991175-29991240)
chr7 (269-433)||(23555162-23555323)
chr7 (383-433)||(34310712-34310762)
chr7 (367-433)||(48408926-48408992)
chr7 (368-433)||(22270095-22270158)
chr7 (375-433)||(2390404-2390461)
chr7 (367-433)||(19502300-19502365)
chr7 (270-433)||(4178895-4179054)
chr7 (390-433)||(32358058-32358100)
chr7 (390-433)||(3259117-3259159)
chr7 (390-433)||(8359319-8359362)
chr7 (286-433)||(27347939-27348081)
chr7 (78-121)||(30219064-30219107)
chr7 (391-433)||(6432093-6432134)
chr7 (367-433)||(41317416-41317480)
chr7 (64-121)||(39187716-39187773)
chr7 (368-433)||(48489553-48489616)
chr7 (50-117)||(14584939-14585007)
chr7 (46-121)||(18503574-18503650)
chr7 (81-121)||(30218756-30218796)
[»] chr5 (31 HSPs)
chr5 (162-433)||(10593380-10593650)
chr5 (159-430)||(40380216-40380486)
chr5 (161-433)||(25078243-25078514)
chr5 (161-433)||(25136212-25136483)
chr5 (162-430)||(40382427-40382694)
chr5 (159-430)||(16544534-16544807)
chr5 (156-430)||(16546756-16547032)
chr5 (193-433)||(29720486-29720721)
chr5 (193-433)||(29722646-29722881)
chr5 (188-433)||(22536100-22536336)
chr5 (192-433)||(29750969-29751206)
chr5 (196-433)||(9789042-9789270)
chr5 (196-433)||(18441462-18441694)
chr5 (199-433)||(16409597-16409824)
chr5 (196-433)||(26178004-26178234)
chr5 (333-433)||(26170884-26170983)
chr5 (367-433)||(37439263-37439328)
chr5 (278-433)||(13239873-13240025)
chr5 (367-433)||(25412882-25412947)
chr5 (286-433)||(30182710-30182852)
chr5 (383-433)||(13343182-13343232)
chr5 (367-433)||(36074024-36074089)
chr5 (390-433)||(213587-213630)
chr5 (375-433)||(28278438-28278494)
chr5 (390-433)||(40147383-40147425)
chr5 (390-433)||(5058167-5058209)
chr5 (286-433)||(32636946-32637088)
chr5 (367-433)||(16452202-16452266)
chr5 (47-120)||(40971848-40971922)
chr5 (64-117)||(40972143-40972196)
chr5 (46-121)||(26032255-26032331)
[»] chr2 (27 HSPs)
chr2 (161-433)||(13655804-13656078)
chr2 (162-433)||(12647162-12647432)
chr2 (218-433)||(6266813-6267023)
chr2 (196-433)||(32289686-32289916)
chr2 (266-433)||(4484211-4484376)
chr2 (266-433)||(30833468-30833633)
chr2 (269-433)||(36987961-36988122)
chr2 (267-433)||(4503017-4503179)
chr2 (367-433)||(45099876-45099941)
chr2 (367-433)||(2334399-2334464)
chr2 (367-433)||(6594987-6595052)
chr2 (367-433)||(36205646-36205711)
chr2 (367-433)||(5723237-5723302)
chr2 (63-121)||(17642622-17642680)
chr2 (390-433)||(45727051-45727093)
chr2 (64-121)||(24895756-24895813)
chr2 (390-431)||(35446888-35446928)
chr2 (68-121)||(35665334-35665387)
chr2 (390-433)||(1631736-1631778)
chr2 (46-117)||(12496859-12496930)
chr2 (367-433)||(723726-723790)
chr2 (367-433)||(34139752-34139816)
chr2 (368-433)||(17057352-17057415)
chr2 (368-433)||(17085335-17085398)
chr2 (392-433)||(33648294-33648335)
chr2 (367-431)||(1345590-1345653)
chr2 (46-121)||(1943891-1943967)
[»] chr3 (46 HSPs)
chr3 (159-433)||(25637549-25637825)
chr3 (162-433)||(3617572-3617842)
chr3 (158-430)||(4598295-4598566)
chr3 (159-430)||(4600517-4600787)
chr3 (162-430)||(10211520-10211788)
chr3 (159-430)||(10209300-10209571)
chr3 (159-430)||(10056344-10056615)
chr3 (159-430)||(10058566-10058837)
chr3 (159-430)||(10060788-10061059)
chr3 (159-430)||(10063010-10063281)
chr3 (159-430)||(10065232-10065503)
chr3 (161-426)||(10067435-10067700)
chr3 (191-433)||(45283108-45283345)
chr3 (214-430)||(54635249-54635462)
chr3 (191-430)||(6716624-6716859)
chr3 (196-433)||(7779821-7780050)
chr3 (218-433)||(801214-801419)
chr3 (266-433)||(23200020-23200184)
chr3 (268-433)||(23197823-23197985)
chr3 (269-433)||(19683774-19683935)
chr3 (367-433)||(9636106-9636172)
chr3 (383-433)||(7762387-7762437)
chr3 (383-433)||(9581404-9581454)
chr3 (367-433)||(37408580-37408645)
chr3 (375-433)||(43401789-43401847)
chr3 (367-433)||(45095285-45095350)
chr3 (269-433)||(7764586-7764747)
chr3 (367-433)||(5258125-5258190)
chr3 (379-433)||(43403736-43403790)
chr3 (375-433)||(49199457-49199515)
chr3 (368-433)||(34491334-34491397)
chr3 (367-433)||(5260304-5260369)
chr3 (41-117)||(33309661-33309739)
chr3 (46-121)||(33309950-33310026)
chr3 (46-121)||(49745721-49745797)
chr3 (367-433)||(16499151-16499215)
chr3 (375-433)||(40913415-40913472)
chr3 (392-433)||(4570074-4570115)
chr3 (368-433)||(40735505-40735568)
chr3 (46-121)||(25693304-25693380)
chr3 (390-433)||(6095603-6095645)
chr3 (63-121)||(28260014-28260071)
chr3 (48-121)||(52275147-52275220)
chr3 (68-121)||(51107685-51107738)
chr3 (64-121)||(54141384-54141441)
chr3 (46-121)||(16024809-16024885)
[»] chr6 (35 HSPs)
chr6 (161-433)||(25421428-25421699)
chr6 (160-433)||(6027369-6027640)
chr6 (160-430)||(13154040-13154310)
chr6 (160-430)||(33341876-33342148)
chr6 (162-430)||(34167205-34167472)
chr6 (159-430)||(34164983-34165254)
chr6 (191-430)||(16578327-16578561)
chr6 (191-430)||(16616819-16617053)
chr6 (191-430)||(16653237-16653471)
chr6 (191-430)||(16554994-16555228)
chr6 (191-430)||(16631550-16631784)
chr6 (191-430)||(27647985-27648210)
chr6 (162-299)||(6136079-6136216)
chr6 (218-433)||(3072596-3072805)
chr6 (286-433)||(412224-412369)
chr6 (217-433)||(6097285-6097497)
chr6 (160-274)||(13159051-13159166)
chr6 (218-433)||(2171366-2171578)
chr6 (367-433)||(16452310-16452375)
chr6 (367-433)||(5406181-5406246)
chr6 (367-433)||(5410506-5410571)
chr6 (367-433)||(30834517-30834582)
chr6 (367-433)||(31404656-31404721)
chr6 (367-433)||(5409051-5409115)
chr6 (367-433)||(5413376-5413440)
chr6 (286-433)||(33160254-33160398)
chr6 (378-433)||(3808699-3808754)
chr6 (390-433)||(17763112-17763155)
chr6 (390-433)||(21589053-21589095)
chr6 (390-433)||(21593786-21593828)
chr6 (367-433)||(16569144-16569208)
chr6 (79-121)||(12754032-12754074)
chr6 (383-433)||(33211182-33211231)
chr6 (369-433)||(9183015-9183077)
chr6 (367-431)||(21356021-21356084)
[»] chr4 (34 HSPs)
chr4 (162-433)||(8395725-8395996)
chr4 (159-433)||(8393516-8393790)
chr4 (162-433)||(7125024-7125294)
chr4 (159-433)||(7122805-7123078)
chr4 (159-430)||(5136190-5136462)
chr4 (162-430)||(5138415-5138684)
chr4 (15-122)||(24789657-24789765)
chr4 (15-122)||(24818494-24818602)
chr4 (218-433)||(31495143-31495362)
chr4 (367-433)||(56178618-56178683)
chr4 (269-433)||(5369968-5370129)
chr4 (375-433)||(2209836-2209894)
chr4 (367-433)||(13992274-13992339)
chr4 (367-433)||(48143165-48143230)
chr4 (390-433)||(29999809-29999852)
chr4 (375-433)||(50262689-50262747)
chr4 (367-433)||(52095344-52095408)
chr4 (64-121)||(5521527-5521584)
chr4 (367-431)||(52082645-52082708)
chr4 (390-433)||(41964538-41964580)
chr4 (47-121)||(44340962-44341037)
chr4 (390-433)||(8648261-8648303)
chr4 (390-433)||(41639548-41639590)
chr4 (390-433)||(50673851-50673893)
chr4 (367-433)||(47038393-47038457)
chr4 (367-433)||(48893620-48893684)
chr4 (17-121)||(52131915-52132021)
chr4 (375-433)||(54883142-54883199)
chr4 (368-433)||(12739533-12739596)
chr4 (64-121)||(15186862-15186919)
chr4 (368-433)||(26175619-26175682)
chr4 (64-121)||(38851981-38852038)
chr4 (64-121)||(51203228-51203285)
chr4 (64-121)||(53933365-53933422)
[»] chr1 (31 HSPs)
chr1 (162-433)||(44203754-44204024)
chr1 (191-433)||(9036538-9036775)
chr1 (192-430)||(21054083-21054314)
chr1 (192-433)||(9987323-9987558)
chr1 (218-433)||(40282499-40282711)
chr1 (218-433)||(20622072-20622283)
chr1 (266-433)||(51765519-51765684)
chr1 (269-433)||(8550670-8550833)
chr1 (367-433)||(3189452-3189517)
chr1 (367-433)||(3198269-3198334)
chr1 (367-433)||(3207108-3207173)
chr1 (383-433)||(13316348-13316398)
chr1 (367-433)||(20762794-20762859)
chr1 (375-433)||(42297963-42298021)
chr1 (390-433)||(29136369-29136412)
chr1 (390-433)||(13547093-13547135)
chr1 (390-433)||(13549004-13549046)
chr1 (390-433)||(37168420-37168462)
chr1 (367-433)||(13659318-13659382)
chr1 (367-432)||(834149-834212)
chr1 (46-121)||(27086253-27086329)
chr1 (46-104)||(10840488-10840546)
chr1 (390-433)||(11348820-11348862)
chr1 (390-433)||(28242426-28242469)
chr1 (390-433)||(47255343-47255386)
chr1 (367-433)||(4552619-4552683)
chr1 (367-433)||(28265536-28265600)
chr1 (391-433)||(34603699-34603740)
chr1 (383-433)||(37033068-37033118)
chr1 (367-433)||(46065040-46065104)
chr1 (369-433)||(28220210-28220272)
[»] scaffold0137 (1 HSPs)
scaffold0137 (160-430)||(6398-6669)
[»] scaffold0565 (1 HSPs)
scaffold0565 (161-433)||(2379-2650)
[»] chr8 (26 HSPs)
chr8 (160-430)||(15290649-15290919)
chr8 (160-430)||(15471018-15471288)
chr8 (189-430)||(42575128-42575367)
chr8 (191-433)||(3439625-3439861)
chr8 (191-430)||(25690079-25690313)
chr8 (196-433)||(2627858-2628087)
chr8 (286-433)||(42498316-42498459)
chr8 (267-433)||(31218379-31218541)
chr8 (367-433)||(17982775-17982840)
chr8 (367-433)||(34254312-34254377)
chr8 (367-433)||(34256488-34256553)
chr8 (367-433)||(1746200-1746265)
chr8 (367-433)||(19945340-19945405)
chr8 (367-433)||(44303977-44304042)
chr8 (390-433)||(42434995-42435037)
chr8 (44-121)||(22210236-22210314)
chr8 (368-433)||(43036545-43036608)
chr8 (390-433)||(18655522-18655564)
chr8 (367-433)||(3303652-3303716)
chr8 (367-433)||(4743196-4743260)
chr8 (375-433)||(10930188-10930245)
chr8 (390-432)||(11384108-11384149)
chr8 (79-117)||(33657607-33657645)
chr8 (368-433)||(15212908-15212971)
chr8 (292-329)||(32902096-32902133)
chr8 (46-107)||(36684238-36684295)
[»] scaffold0674 (1 HSPs)
scaffold0674 (205-433)||(3545-3772)
[»] scaffold1808 (1 HSPs)
scaffold1808 (205-419)||(1-214)
[»] scaffold0491 (2 HSPs)
scaffold0491 (266-433)||(11042-11207)
scaffold0491 (266-433)||(8616-8781)
[»] scaffold0286 (1 HSPs)
scaffold0286 (367-433)||(11679-11745)
[»] scaffold0002 (1 HSPs)
scaffold0002 (286-433)||(434655-434798)
[»] scaffold1519 (1 HSPs)
scaffold1519 (383-433)||(1037-1087)
[»] scaffold0176 (1 HSPs)
scaffold0176 (390-433)||(18007-18050)
[»] scaffold0016 (1 HSPs)
scaffold0016 (383-433)||(114724-114774)
[»] scaffold0006 (1 HSPs)
scaffold0006 (367-433)||(149079-149143)
[»] scaffold0236 (1 HSPs)
scaffold0236 (392-433)||(10611-10651)


Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 162 - 433
Target Start/End: Original strand, 1560441 - 1560712
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| |||||||   ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  1560441 tgttgtgaatccccgagcctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacagagta 1560540  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1560541 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 1560640  T
Q  362 gaagaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1560641 gaagaaaacaaatacaccaagagattggttacccagttcggtccaaacttgacctactctggaggagagatt 1560712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 159 - 433
Target Start/End: Original strand, 18391969 - 18392242
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    |||||||||| ||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18391969 aattgttgtgaatccccgaacctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacagagagtggtaaccaccgaacaaa 18392068  T
Q  259 gtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagg 358  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  18392069 gtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagg 18392166  T
Q  359 gaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18392167 gaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 18392242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 159 - 430
Target Start/End: Original strand, 6594331 - 6594601
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    |||||||||| |||||||   |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6594331 aattgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaa 6594430  T
Q  259 gtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagg 358  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  6594431 gtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaag--gagg 6594528  T
Q  359 gaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6594529 gaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 6594601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 162 - 433
Target Start/End: Original strand, 18388536 - 18388806
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| ||||||| | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18388536 tgttgtgaatccccgaacctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 18388635  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||||||||    
T  18388636 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaagagagggaa 18388733  T
Q  362 gaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18388734 gaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 18388806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 162 - 433
Target Start/End: Original strand, 32060098 - 32060368
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| ||||||| | |||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  32060098 tgttgtgaatccccgaacctccaaggccggatcgaaccacaccaatataaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 32060197  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  32060198 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaag--gagggaa 32060295  T
Q  362 gaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||| | |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  32060296 gaagaaaacaataaacacaaagagattgttcaccaagttcggtccaaacttgacctactctggaggagagatt 32060368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 162 - 430
Target Start/End: Original strand, 6592116 - 6592383
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| |||||||   |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  6592116 tgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagtt 6592215  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  6592216 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagaaaaacaag--gagggaa 6592313  T
Q  362 gaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    ||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6592314 gaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 6592383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 191 - 433
Target Start/End: Complemental strand, 20344255 - 20344019
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaa---acaacaaaa 287  Q
    ||||||||||||||||| ||||||||   |||||||||||| | ||||||||||||||||| |||||||||   ||||||||||| ||   |||| |||     
T  20344255 gatcgaaccacaccaatgcaaagaat---gatgtgtggagcaaaggagagtggtaaccaccaaacaaagtg---tgtgcaagcaacaatcgacaaaaaac 20344162  T
Q  288 caccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacacc-aagagat 386  Q
    || ||||||||||||||||||||| |||||| |||||||||| | |||||||||||||||  ||||||||||||||||||||||||  |||| |||||||    
T  20344161 cagcacctagatctaatctaggaaacaagtgagaaacacaaaac-acaatcacaagataa--aaggagagggaagaagaaaacaaaagcaccaaagagat 20344065  T
Q  387 tggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    || |||||||||||||||| |||||||||||||||||||||||||||    
T  20344064 tgttcacccagttcggtcc-aacttgacctactctggaggagagatt 20344019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 218 - 433
Target Start/End: Original strand, 43503991 - 43504200
Alignment:
Q  218 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaa-g 316  Q
    |||||||||||||| | ||||||||||||||||| |||||||||| | |||||||||| || ||||||||   || |||||||||||||||||| ||| |    
T  43503991 atgatgtgtggagcaaaggagagtggtaaccacc-aacaaagtgtgt-gtgcaagcaataatcaacaaaaa--cagctagatctaatctaggaatcaaag 43504086  T
Q  317 tgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacct 416  Q
    ||  || || ||| || ||| |||||||||||  ||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  43504087 tgaaaagcataaaaca-caagcacaagataaa--aggagagggaagaggaaaacaaagacaccaagagattgttcacccagttcgatccaaacttgacct 43504183  T
Q  417 actctggaggagagatt 433  Q
    ||| |||||||||||||    
T  43504184 actatggaggagagatt 43504200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 266 - 433
Target Start/End: Complemental strand, 39731656 - 39731491
Alignment:
Q  266 gtgcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaaga 363  Q
    |||||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||| || ||| |||||||||||  |||||||||||||    
T  39731656 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaacca-caagcacaagataaa--aggagagggaaga 39731560  T
Q  364 agaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
     ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39731559 ggaaaacaaagacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 39731491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 320 - 432
Target Start/End: Complemental strand, 24790074 - 24789964
Alignment:
Q  320 gaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaa-caaatacaccaagagattggtcacccagttcggtccaaacttgacctac 418  Q
    ||||||||| ||| |||||||||||||||  ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  24790074 gaaacacaatgca-caatcacaagataaa--aggagagggaagaagaaaaacaaagacaccaagagattgttcacccagttcggtccaaacttgacctac 24789978  T
Q  419 tctggaggagagat 432  Q
    ||||||||||||||    
T  24789977 tctggaggagagat 24789964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 35854102 - 35854036
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35854102 aaacaaacacaccaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 35854036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 25766940 - 25767006
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  25766940 aaacaaacacaccaagagattgttcacccagttcggtctaaacttgacctactctggaggagagatt 25767006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 324
Target Start/End: Complemental strand, 24790333 - 24790230
Alignment:
Q  218 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 317  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||    ||||||| || || |||||||||||||||||||||||||||||||| || ||    
T  24790333 atgatgtgtggagcaacggaaagtggtaaccaccaaacaaagtgc---gtgcaagtaataatcaacaaaacaccacctagatctaatctaggaaacaggt 24790237  T
Q  318 gtgaaac 324  Q
    | |||||    
T  24790236 gagaaac 24790230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 433
Target Start/End: Complemental strand, 25616137 - 25615975
Alignment:
Q  269 caagcaagaaacaacaa-aacaccacctagatctaatctaggaacc-aagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaaga 366  Q
    ||||||| || |||||| |||| ||||||||||||||||||||| | |||||  || |||||| | |||| |||||||||||      ||| ||||||||    
T  25616137 caagcaataatcaacaataacaacacctagatctaatctaggaatcgaagtgaaaagcacaaaaccacaagcacaagataaa------gagagaagaaga 25616044  T
Q  367 ---aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
       ||||||| ||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||    
T  25616043 gagaaacaaacacaccaa-agattgttcgcccagttcggtccaaacttgacctactctggaggagagatt 25615975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 29991240 - 29991175
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29991240 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 29991175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 433
Target Start/End: Complemental strand, 23555323 - 23555162
Alignment:
Q  269 caagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaaga 366  Q
    ||||||| || |||||| |||| ||||||||||||||||||||| ||| ||   ||||||||  | |||| || ||||||||  |||||||  ||||       
T  23555323 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtaaaaaacacaataccacaagcaaaagataaa--aggagag--aagagag 23555228  T
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23555227 aaacaaacacatcaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 23555162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 34310712 - 34310762
Alignment:
Q  383 agattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34310712 agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 34310762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 48408992 - 48408926
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  48408992 aaacaaacacaccaagaaattgttcacccagttcggtctaaacttgacatactctggaggagagatt 48408926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 433
Target Start/End: Complemental strand, 22270158 - 22270095
Alignment:
Q  368 aacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| |||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  22270158 aacaaacacaccaagagat-gttcacccagttcggtccaa-cttgacctactctggaggagagatt 22270095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 375 - 433
Target Start/End: Complemental strand, 2390461 - 2390404
Alignment:
Q  375 acaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||  ||||| |||||||||||| |||||||||||||||||||||||||    
T  2390461 acaccaagagattattcacctagttcggtccaa-cttgacctactctggaggagagatt 2390404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 19502365 - 19502300
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||| |||| |||||||||||| ||||||||||||||||||    
T  19502365 aaacaaacacaccaa-agattgttcacccacttcgttccaaacttgacttactctggaggagagatt 19502300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 433
Target Start/End: Complemental strand, 4179054 - 4178895
Alignment:
Q  270 aagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaa 367  Q
    |||||| || |||||| |||| ||||||||||||||||||||| ||| |||  ||||||||| || ||| || || |||||  |||||||  ||||   |    
T  4179054 aagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaacca-caagcaaaatataaa--aggagag--aagagaga 4178960  T
Q  368 aacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||| |||||| ||||| |||| ||| |||||||||||| ||||||||||||||||    
T  4178959 aacaaacacaccaa-agattgttcacctagtttggttcaaacttgacctgctctggaggagagatt 4178895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 32358058 - 32358100
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  32358058 tcacccagttcggtccaa-cttgacctactctggaggagagatt 32358100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 3259159 - 3259117
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||| ||| |||||||||||||||||||||||||    
T  3259159 tcacccagttcggttcaa-cttgacctactctggaggagagatt 3259117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 8359319 - 8359362
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||||   |||||||||||||||||||||||    
T  8359319 tcacccagttcggtccaacaatgacctactctggaggagagatt 8359362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 433
Target Start/End: Complemental strand, 27348081 - 27347939
Alignment:
Q  286 aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagag 384  Q
    |||| ||||||||||||||||||||| ||| |||  ||||||||| | |||| || ||||||||    | ||| |||||    |||||| ||||||| ||    
T  27348081 aacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaa----gtgagagaagagaggaacaaacacaccaa-ag 27347987  T
Q  385 attggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  27347986 attgttgacccagttcggtccaa-cttgacctaatctgggggagagatt 27347939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 121
Target Start/End: Original strand, 30219064 - 30219107
Alignment:
Q  78 gactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||    
T  30219064 gactaaaatcaaaattcgctatatttataaggacgaaaaactta 30219107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 433
Target Start/End: Complemental strand, 6432134 - 6432093
Alignment:
Q  391 cacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  6432134 cacccagttcggtccaa-cttgacctactctgaaggagagatt 6432093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 41317416 - 41317480
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  41317416 aaacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctaatctgggggagagatt 41317480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 39187716 - 39187773
Alignment:
Q  64 ttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||| ||| ||||||||||||| ||| |||||||| || | ||||||||||||    
T  39187716 ttttattttctaaagactaaaatcaaaattcattatatttataggaacgaaaaactta 39187773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 433
Target Start/End: Complemental strand, 48489616 - 48489553
Alignment:
Q  368 aacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  48489616 aacaaacacaccaa-agattgtttacccagttcggtccaa-cttgacctaatctgggggagagatt 48489553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 14585007 - 14584939
Alignment:
Q  50 gatgaaaacacc-cgttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaa 117  Q
    |||||||||| | ||||||||||||||  ||||||||||||| ||  |||||||||||  |||||||||    
T  14585007 gatgaaaacatcacgttttattttttagggactaaaatcaaaatttattatatttttagagacgaaaaa 14584939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 18503650 - 18503574
Alignment:
Q  46 tgaggatgaaaacacc-cgttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||||||||||||| | | ||||||||||||  ||  ||||||||| || | ||||||| |||||||||||||||||    
T  18503650 tgaggatgaaaacatctcattttattttttagggataaaaatcaaaatttgatatatttataaggacgaaaaactta 18503574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 30218796 - 30218756
Alignment:
Q  81 taaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||||||||| |||||||||||| || ||||||||||||||    
T  30218796 taaaatcaaaattcgttatatttatatggacgaaaaactta 30218756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 162 - 433
Target Start/End: Complemental strand, 10593650 - 10593380
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10593650 tgttgtgtatccccgtatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagtg 10593551  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10593550 tattgtgcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaa 10593452  T
Q  362 gaagaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10593451 gtagaaaacaaatacaccaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 10593380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 159 - 430
Target Start/End: Complemental strand, 40380486 - 40380216
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    |||||||||| |||||||   |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40380486 aattgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaa 40380387  T
Q  259 gtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagg 358  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  40380386 gtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaag--gagg 40380289  T
Q  359 gaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40380288 gaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 40380216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 161 - 433
Target Start/End: Complemental strand, 25078514 - 25078243
Alignment:
Q  161 ttgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 260  Q
    |||||||| ||||||  | |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25078514 ttgttgtgaatccccaaacctccaaggccggatcgaaccacaccaatacaaagaagaatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 25078415  T
Q  261 gtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagaggga 360  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||    
T  25078414 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 25078317  T
Q  361 agaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25078316 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 25078243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 161 - 433
Target Start/End: Complemental strand, 25136483 - 25136212
Alignment:
Q  161 ttgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 260  Q
    |||||||| ||||||  | |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25136483 ttgttgtgaatccccaaacctccaaggccggatcgaaccacaccaatacaaagaagaatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 25136384  T
Q  261 gtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagaggga 360  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||    
T  25136383 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 25136286  T
Q  361 agaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25136285 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 25136212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 162 - 430
Target Start/End: Complemental strand, 40382694 - 40382427
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| |||||||   |||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||     
T  40382694 tgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcggcggagagtggtaaccaccaaacaaagtt 40382595  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  40382594 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaag--gagggaa 40382497  T
Q  362 gaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    ||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40382496 gaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 40382427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 159 - 430
Target Start/End: Complemental strand, 16544807 - 16544534
Alignment:
Q  159 aattgttgtgtatccccggatctccaag-atcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaa 257  Q
    |||||||||| |||||||   ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16544807 aattgttgtgaatccccgagcctccaaggaccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaa 16544708  T
Q  258 agtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaac-aaggag 355  Q
    ||  ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||| || |||||||||||| ||||||    
T  16544707 agcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaaggag 16544610  T
Q  356 agggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16544609 agggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 16544534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 156 - 430
Target Start/End: Complemental strand, 16547032 - 16546756
Alignment:
Q  156 ttaaattgttgtgtatccccggatctccaag-atcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaa 254  Q
    ||||||||||||| |||||||   ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  16547032 ttaaattgttgtgaatccccgagcctccaaggaccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtgataaccaccaaa 16546933  T
Q  255 caaagtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaac-aag 352  Q
    |||||  ||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||  |||||||||| || |||||||||||| |||    
T  16546932 caaagcttattgagcaagcaagaaacaacaaaacaccacctaaatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaag 16546835  T
Q  353 gagagggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16546834 gagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 16546756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 193 - 433
Target Start/End: Complemental strand, 29720721 - 29720486
Alignment:
Q  193 tcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacacca 292  Q
    |||||||||||||||||||  |||| || |||||||||| | ||||||||||||||||| |||||||||| | || ||||||| || |||||||||||||    
T  29720721 tcgaaccacaccaatacaagaaata-tgttgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgt-gtacaagcaataatcaacaaaacacca 29720624  T
Q  293 cctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggtca 392  Q
    ||||||||||||||||||| |||||| |||||||||  || |||||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||    
T  29720623 cctagatctaatctaggaaacaagtgagaaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaaagacaccaagagattgttca 29720527  T
Q  393 cccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  29720526 cccagttcggtccaaacttgacctactctagaggagagatt 29720486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 193 - 433
Target Start/End: Complemental strand, 29722881 - 29722646
Alignment:
Q  193 tcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacacca 292  Q
    |||||||||||||||||||  |||| || |||||||||| | | ||||||||||||||| |||||||||| | || ||||||| || |||||||||||||    
T  29722881 tcgaaccacaccaatacaagaaata-tggtgtgtggagcaaagtagagtggtaaccaccaaacaaagtgtgt-gtacaagcaataatcaacaaaacacca 29722784  T
Q  293 cctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggtca 392  Q
    ||||||||||||||||||| |||||| |||||||||  || |||||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||    
T  29722783 cctagatctaatctaggaaacaagtgagaaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaaagacaccaagagattgttca 29722687  T
Q  393 cccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  29722686 cccagttcggtccaaatttgacctactctggaggagagatt 29722646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 188 - 433
Target Start/End: Original strand, 22536100 - 22536336
Alignment:
Q  188 tcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaa-caaagtgtattgtgcaagcaagaaacaacaaa 286  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||| || ||||||||||   |||||||| || |||||||    
T  22536100 tcggatcgaaccacaccaatacaaagaat---gatgtgtggagcgacggagagcggtaaccaccaaagcaaagtgtat---gcaagcaacaatcaacaaa 22536193  T
Q  287 acaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagat 386  Q
    | || |||||||||||||||||||| |||||| ||||| |||| || |||||||||||||||  ||| |||||||||||||||||||  |||||||||||    
T  22536194 aaac-acctagatctaatctaggaaacaagtgagaaactcaaaaca-caatcacaagataaa--aggggagggaagaagaaaacaaaagcaccaagagat 22536289  T
Q  387 tggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    || ||||||||||||||||||||||||||||||||||||||||||||    
T  22536290 tgttcacccagttcggtccaaacttgacctactctggaggagagatt 22536336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 192 - 433
Target Start/End: Original strand, 29750969 - 29751206
Alignment:
Q  192 atcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacacc 291  Q
    ||||||||||||||||||||  |||| ||||||||||||| | ||||||||||||||||| ||||| |||| | |||||||||| || ||||||||||||    
T  29750969 atcgaaccacaccaatacaagaaata-tgatgtgtggagcaaaggagagtggtaaccaccaaacaatgtgtgt-gtgcaagcaataatcaacaaaacacc 29751066  T
Q  292 acctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaat-acaccaagagattggt 390  Q
    |||||||| |||||||| || |||||| ||||||||   || |||||||||||||||  |||||||||||||||||||||||  |||||||||||||| |    
T  29751067 acctagatataatctagaaaacaagtgagaaacacagtaca-caatcacaagataaa--aggagagggaagaagaaaacaaaagacaccaagagattgtt 29751163  T
Q  391 cacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29751164 cacccagttcggtccaaacttgacctactctggaggagagatt 29751206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 9789042 - 9789270
Alignment:
Q  196 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacct 295  Q
    |||||||||||||||||| ||   |||||||||||| | ||| ||| ||||||||| ||||||||||   |||||||||| || |||||||||| |||||    
T  9789042 aaccacaccaatacaaagtat---gatgtgtggagcaaaggaaagtagtaaccacc-aacaaagtgt---gtgcaagcaaaaatcaacaaaacagcacct 9789134  T
Q  296 agatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaa-gagattggtcacc 394  Q
    ||||||||||||||||  |||||  ||||||||  || ||| ||||||||||||  |||||||||||| ||||||||| ||||||| ||||||| |||||    
T  9789135 agatctaatctaggaaagaagtgaaaaacacaataca-caagcacaagataaac--ggagagggaagaggaaaacaaagacaccaaagagattgttcacc 9789231  T
Q  395 cagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9789232 cagttcggtccaaacttgacctactctggaggagagatt 9789270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 18441462 - 18441694
Alignment:
Q  196 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacct 295  Q
    ||||||||||||||||||  ||| |||||||||||| | ||| ||| ||||||||| ||||||||||   |||||||||| || |||||||||| |||||    
T  18441462 aaccacaccaatacaaag--taa-gatgtgtggagcaaaggaaagtagtaaccacc-aacaaagtgt---gtgcaagcaataatcaacaaaacagcacct 18441554  T
Q  296 agatctaatctaggaaccaagtgtgaaa----cacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaa-gagattggt 390  Q
    ||||||||||||||||  |||||  |||    |||||  || ||| ||||||||||||  |||||||||||| ||||||||| ||||||| ||||||| |    
T  18441555 agatctaatctaggaaagaagtgaaaaaaaaacacaataca-caagcacaagataaac--ggagagggaagaggaaaacaaagacaccaaagagattgtt 18441651  T
Q  391 cacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  18441652 cacccagttcggtccaaacttgacctactctagaggagagatt 18441694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 199 - 433
Target Start/End: Complemental strand, 16409824 - 16409597
Alignment:
Q  199 cacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaa-aacaccacctag 297  Q
    ||||||||||||||| ||   |||||||||||| | ||| ||| ||||||||  |||||||||    |||||||||| || |||||| |||| |||||||    
T  16409824 cacaccaatacaaagtat---gatgtgtggagcaaaggaaagtagtaaccact-aacaaagtgg---gtgcaagcaataatcaacaataacaacacctag 16409732  T
Q  298 atctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaa-gagattggtcaccc 395  Q
    |||||||||||||| ||| |||  || || ||| || ||| |||||||||||  ||||||||||||| ||||||||| ||||||| ||||||| ||||||    
T  16409731 atctaatctaggaaacaaagtgaaaagcataaaaca-caagcacaagataaa--aggagagggaagaggaaaacaaagacaccaaagagattgttcaccc 16409635  T
Q  396 agttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16409634 agttcggtccaaacttgacctactctggaggagagatt 16409597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 26178234 - 26178004
Alignment:
Q  196 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaa-aacaccacc 294  Q
    |||||||||||||| |||  ||| |||||||||||| | ||| ||| ||||||||  ||||||||||   |||||||||| || |||  | |||| ||||    
T  26178234 aaccacaccaatacgaag--taa-gatgtgtggagcaaaggaaagtagtaaccact-aacaaagtgt---gtgcaagcaataatcaatgataacaacacc 26178142  T
Q  295 tagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaa-gagattggtca 392  Q
    ||||||||||||||||| ||| |||  || || ||| || ||| |||||||||||  ||||||||||||| ||||||||| ||||||| ||||||| |||    
T  26178141 tagatctaatctaggaatcaaagtgaaaagcataaaaca-caagcacaagataaa--aggagagggaagaggaaaacaaagacaccaaagagattgttca 26178045  T
Q  393 cccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26178044 cccagttcggtccaaacttgacctactctggaggagagatt 26178004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 333 - 433
Target Start/End: Complemental strand, 26170983 - 26170884
Alignment:
Q  333 acaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaa-gagattggtcacccagttcggtccaaacttgacctactctggaggagaga 431  Q
    |||| |||||||||||  ||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26170983 acaagcacaagataaa--aggagagggaagaggaaaacaaagacaccaaagagattgttcacccagttcggtccaaacttgacctactctggaggagaga 26170886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 37439328 - 37439263
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37439328 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 37439263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 278 - 433
Target Start/End: Complemental strand, 13240025 - 13239873
Alignment:
Q  278 aacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaata 375  Q
    |||||||| |||| |||||||||||||||||| || ||| |||  ||||||||| | |||| || ||||||||  |||||||  ||||   ||||||| |    
T  13240025 aacaacaataacaacacctagatctaatctagtaatcaaagtgaaaaacacaaaaccacaagcaaaagataaa--aggagag--aagagagaaacaaaca 13239930  T
Q  376 caccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| | |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  13239929 caccaaaa-attgttcacccagttcggtccaaatttgacctactctggaggagagatt 13239873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 25412947 - 25412882
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  25412947 aaacaaacacaccaa-agattgttcacccagttcagtccaaacttgacctactctggaggagagatt 25412882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 433
Target Start/End: Complemental strand, 30182852 - 30182710
Alignment:
Q  286 aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagag 384  Q
    |||| ||||||||||||||||||||| ||| |||  || |||||| || ||| |||||||||||  |||||||  ||||   ||||||| ||||||| ||    
T  30182852 aacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaaca-caagcacaagataaa--aggagag--aagagagaaacaaacacaccaa-ag 30182759  T
Q  385 attggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||||    
T  30182758 attgttcatccagttcggtccaaacttgacatactctggaggagagatt 30182710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 13343232 - 13343182
Alignment:
Q  383 agattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  13343232 agattgttcacccagttcggtccaaacatgacctactctggaggagagatt 13343182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 36074024 - 36074089
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||| |||||||||||||||||||||||||| |||||||||||||    
T  36074024 aaacaaacacaccaa-agattgttcatccagttcggtccaaacttgacctactttggaggagagatt 36074089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 213630 - 213587
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  213630 tcacccagttcggtccaaacttgacctactatggaggagagatt 213587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 375 - 433
Target Start/End: Complemental strand, 28278494 - 28278438
Alignment:
Q  375 acaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||    
T  28278494 acaccaaga-attgttcacccagttcggtccaa-cttgacctactctggaggagagatt 28278438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 40147425 - 40147383
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  40147425 tcacccagttcggtccaa-cttgacctactctggaggagagatt 40147383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 5058209 - 5058167
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| ||||||||||||| |||||||||||    
T  5058209 tcacccagttcggtccaa-cttgacctactctagaggagagatt 5058167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 433
Target Start/End: Complemental strand, 32637088 - 32636946
Alignment:
Q  286 aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagag 384  Q
    |||| |||||||||||||||||| || ||| |||  |||| ||||   |||| |||||||||||    | |||||||||   ||||||| ||||||| ||    
T  32637088 aacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaatcacaagcacaagataaa----gggagggaagagagaaacaaacacaccaa-ag 32636994  T
Q  385 attggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  32636993 attgttgacccagttcggtccaa-cttgacctaatctgggggagagatt 32636946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 16452266 - 16452202
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||||| || | | |||||||||||||||| ||||||||||||||| |||||||||    
T  16452266 aaacaaacacaccaagaaat-gtttacccagttcggtccaa-cttgacctactctgggggagagatt 16452202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 40971922 - 40971848
Alignment:
Q  47 gaggatgaaaacacc-cgttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactt 120  Q
    ||||||||||||| | | ||||||||||||  ||||||||||||| ||  |||||||| |||||| |||||||||    
T  40971922 gaggatgaaaacatctcattttattttttagggactaaaatcaaaatttattatatttataaggatgaaaaactt 40971848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 40972143 - 40972196
Alignment:
Q  64 ttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaa 117  Q
    ||||||||||||  ||||||||||||| |||||||||||| || ||| ||||||    
T  40972143 ttttattttttagggactaaaatcaaaattcgttatatttatagggatgaaaaa 40972196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 26032331 - 26032255
Alignment:
Q  46 tgaggatgaaaacaccc-gttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||||||||  | |||| ||||||||  || |||||||||| |||| ||||||| || ||||||||||||||    
T  26032331 tgaggatgaaaacattcagtttaattttttagggattaaaatcaaaattcgctatatttatagggacgaaaaactta 26032255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 161 - 433
Target Start/End: Original strand, 13655804 - 13656078
Alignment:
Q  161 ttgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 260  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13655804 ttgttgtgaatccccggacctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacagagt 13655903  T
Q  261 gtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagaggga 360  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13655904 atattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagataaacaaggagaggga 13656003  T
Q  361 agaagaaaacaa-atacacc-aagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13656004 agaagaaaacaacaaacaccaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 13656078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 162 - 433
Target Start/End: Original strand, 12647162 - 12647432
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| |||||||   |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12647162 tgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 12647261  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  12647262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagggaa 12647359  T
Q  362 gaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12647360 gaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 12647432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 218 - 433
Target Start/End: Complemental strand, 6267023 - 6266813
Alignment:
Q  218 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 317  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||   ||| |||||| || |||||||||| |||||||||||||||||||||  ||||    
T  6267023 atgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgt---gtgtaagcaaaaatcaacaaaacaacacctagatctaatctaggaaagaagt 6266927  T
Q  318 gtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaat-acaccaagagattggtcacccagttcggtccaaacttgacct 416  Q
    |  ||||||||  || ||| ||||||||||||  ||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||    
T  6266926 gaaaaacacaataca-caagcacaagataaac--ggagagggaagaagaaaacaaaagacaccaagagattgttcacccagttcggtccaaacttgacct 6266830  T
Q  417 actctggaggagagatt 433  Q
    |||||||||||||||||    
T  6266829 actctggaggagagatt 6266813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 32289916 - 32289686
Alignment:
Q  196 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaa-aacaccacc 294  Q
    ||||||||||||||||||  ||| |||||||||||| | ||| ||| ||||||||  |||||||||    |||||||||| || |||||| |||| ||||    
T  32289916 aaccacaccaatacaaag--taa-gatgtgtggagcaaaggaaagtagtaaccact-aacaaagtgg---gtgcaagcaataatcaacaataacaacacc 32289824  T
Q  295 tagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaa-gagattggtca 392  Q
    ||||||||||||||||| ||| |||  || || ||| || ||| |||||||||||  ||||||||||||| ||||||||  ||||||| ||||||| |||    
T  32289823 tagatctaatctaggaaacaaagtgaaaagcataaaaca-caagcacaagataaa--aggagagggaagaggaaaacaaggacaccaaagagattgttca 32289727  T
Q  393 cccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32289726 cccagttcggtccaaacttgacctactctggaggagagatt 32289686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 266 - 433
Target Start/End: Original strand, 4484211 - 4484376
Alignment:
Q  266 gtgcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaagtgtgaaacacaaag-caacaatcacaagataaacaaggagagggaaga 363  Q
    |||||||||| || |||||| |||| ||||||||||||||||||||| |||  ||||||  ||||  | |||| |||||||||||  |||||||||||||    
T  4484211 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaa-gtgaaaagcaaaaaccacaagcacaagataaa--aggagagggaaga 4484307  T
Q  364 agaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  4484308 agaaaacaaagacaccaa-agattgttcacccagttctgtccaaacttgacctactctggaggagagatt 4484376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 266 - 433
Target Start/End: Complemental strand, 30833633 - 30833468
Alignment:
Q  266 gtgcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaaga 363  Q
    |||||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||| || ||| |||||||||||  |||||||||||||    
T  30833633 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaacca-caagcacaagataaa--aggagagggaaga 30833537  T
Q  364 agaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
     ||||||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  30833536 ggaaaacaaagacaccaa-agattgttcacccagttcagtccaaacttgacctactctggaggagagatt 30833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 269 - 433
Target Start/End: Original strand, 36987961 - 36988122
Alignment:
Q  269 caagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaaga 366  Q
    ||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||||| |||| || ||||||||  |||||||  ||||       
T  36987961 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaagccacaagcaaaagataaa--aggagag--aagagag 36988056  T
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36988057 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 36988122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 267 - 433
Target Start/End: Original strand, 4503017 - 4503179
Alignment:
Q  267 tgcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaa 364  Q
    ||||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||| || ||| |||||||||||  |||||||  ||||     
T  4503017 tgcaagcaataatcaacaataacagcacctagatctaatctaggaaacaaagtgaaaagcacaaaaca-caagcacaagataaa--aggagag--aagag 4503111  T
Q  365 gaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
      ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4503112 agaaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 4503179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 45099941 - 45099876
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45099941 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 45099876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 2334399 - 2334464
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||    
T  2334399 aaacaaacacaccaa-agattgttcccccagttcggtccaaacttgacctactctggaggagagatt 2334464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 6594987 - 6595052
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  6594987 aaacaaacacaccaa-agattgttcactcagttcggtccaaacttgacctactctggaggagagatt 6595052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 36205646 - 36205711
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  36205646 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggatagatt 36205711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 5723237 - 5723302
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||||||    
T  5723237 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttaacctactctagaggagagatt 5723302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 17642622 - 17642680
Alignment:
Q  63 gttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||| ||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||    
T  17642622 gtttaattttttaaggactaaaatcaaaattcgctatatttttagggacgaaaaactta 17642680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 45727093 - 45727051
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  45727093 tcacccagttcggtccaa-cttgacctactctggaggagagatt 45727051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 24895756 - 24895813
Alignment:
Q  64 ttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||| ||  ||||||||||||| || ||||||||| |||||||||||||||||    
T  24895756 ttttattttgtagggactaaaatcaaaatttgttatatttgtaaggacgaaaaactta 24895813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 35446888 - 35446928
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagaga 431  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  35446888 tcacccagttcggtccaa-cttgacctactctggaggagaga 35446928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 35665387 - 35665334
Alignment:
Q  68 attttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||  ||||||||||||| |||| ||||||| |||||||||||||||||    
T  35665387 attttttagggactaaaatcaaaattcgctatatttataaggacgaaaaactta 35665334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 1631736 - 1631778
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  1631736 tcactcagttcggtccaa-cttgacctactctggaggagagatt 1631778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 12496859 - 12496930
Alignment:
Q  46 tgaggatgaaaacacccgttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaa 117  Q
    |||||||||||||| | |||| ||||||||   |||||||||||| |||||||||||| || ||| ||||||    
T  12496859 tgaggatgaaaacatcggtttgattttttaggaactaaaatcaaaattcgttatatttatagggatgaaaaa 12496930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 723726 - 723790
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  723726 aaacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctaatctgggggagagatt 723790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 34139752 - 34139816
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  34139752 aaacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctaatctgggggagagatt 34139816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 433
Target Start/End: Original strand, 17057352 - 17057415
Alignment:
Q  368 aacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  17057352 aacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctagtctgggggagagatt 17057415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 433
Target Start/End: Original strand, 17085335 - 17085398
Alignment:
Q  368 aacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  17085335 aacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctagtctgggggagagatt 17085398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 433
Target Start/End: Complemental strand, 33648335 - 33648294
Alignment:
Q  392 acccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||   |||||||||||||||||||||||    
T  33648335 acccagttcggtccaacaatgacctactctggaggagagatt 33648294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 1345653 - 1345590
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagaga 431  Q
    ||||||| ||||||||| |||| | |||||||||||||| ||  ||||||||||||| |||||||    
T  1345653 aaacaaacacaccaagaaattgttgacccagttcggtcc-aatatgacctactctgggggagaga 1345590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 1943967 - 1943891
Alignment:
Q  46 tgaggatgaaaacacc-cgttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||||| ||||||||| |||| |||||| ||| ||||||||| ||| |   |||||||| |||||||||||||||||    
T  1943967 tgaggaagaaaacacctcgttctattttataaggactaaaattaaaatctattatatttataaggacgaaaaactta 1943891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 159 - 433
Target Start/End: Complemental strand, 25637825 - 25637549
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25637825 aattgttgtgaatccccggacctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaa 25637726  T
Q  259 gtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagc-aacaatcacaagataaacaaggagag 357  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  25637725 gtgtattgtgcaagcaggaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaaacaatcacaagataaacaaggagag 25637626  T
Q  358 ggaagaagaaaacaaatacacc-aagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637625 ggaagaagaaaacaaaagcaccaaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 25637549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 162 - 433
Target Start/End: Complemental strand, 3617842 - 3617572
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| |||||||   ||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||     
T  3617842 tgttgtgaatccccgagcctccaaggtcggatcgaaccacaccaatacaaataagaatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 3617743  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  3617742 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagggaa 3617645  T
Q  362 gaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3617644 gaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 3617572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 158 - 430
Target Start/End: Original strand, 4598295 - 4598566
Alignment:
Q  158 aaattgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaa 257  Q
    ||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4598295 aaattgttgtgaatccccgaacctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaa 4598394  T
Q  258 agtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagag 357  Q
    ||  ||||| ||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  4598395 agcttattgagcaagcaagaaacaataaaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaacaatcacaagataaacaaggagag 4598492  T
Q  358 ggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4598493 ggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 4598566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 159 - 430
Target Start/End: Original strand, 4600517 - 4600787
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    |||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4600517 aattgttgtgaatccccgaacctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaa 4600616  T
Q  259 gtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagg 358  Q
    |  ||||| |||||| |||||||||||||||||||||||||| |||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||    
T  4600617 gcttattgagcaagccagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaa--acaaatcaacaatcacaagataaacaaggagagg 4600714  T
Q  359 gaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4600715 gaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctagaggagag 4600787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 162 - 430
Target Start/End: Complemental strand, 10211788 - 10211520
Alignment:
Q  162 tgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 260  Q
    ||||||| ||||||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||     
T  10211788 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacagagaataatgatgtgtggagcgacggagagtggtaaccaccaatcaaagc 10211689  T
Q  261 gtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagaggga 360  Q
     ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  10211688 ttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaacaatcacaagataaacaaggagaggga 10211591  T
Q  361 agaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    ||| |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10211590 agatgaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 10211520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 159 - 430
Target Start/End: Complemental strand, 10209571 - 10209300
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaa 257  Q
    |||||||||| ||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||    
T  10209571 aattgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacagagaataatgatgtgtggagtgacggagagtggtaaccaccaatcaa 10209472  T
Q  258 agtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagag 357  Q
    ||  ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  10209471 agcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaacaatcacaagataaacaaggagag 10209374  T
Q  358 ggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||| |||||||| | |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10209373 ggaagatgaaaacaataaacacaaagagattggtcacccagtttggtccaaacttgacctactctggaggagag 10209300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 159 - 430
Target Start/End: Complemental strand, 10056615 - 10056344
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaa 257  Q
    |||||||||| ||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  10056615 aattgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacca 10056516  T
Q  258 agtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggaga 356  Q
    ||  ||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || |||||||||||||||||||    
T  10056515 agcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggaga 10056419  T
Q  357 gggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10056418 gggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 10056344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 159 - 430
Target Start/End: Complemental strand, 10058837 - 10058566
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaa 257  Q
    |||||||||| ||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  10058837 aattgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacca 10058738  T
Q  258 agtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggaga 356  Q
    ||  ||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || |||||||||||||||||||    
T  10058737 agcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggaga 10058641  T
Q  357 gggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10058640 gggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 10058566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 159 - 430
Target Start/End: Complemental strand, 10061059 - 10060788
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaa 257  Q
    |||||||||| ||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  10061059 aattgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacca 10060960  T
Q  258 agtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggaga 356  Q
    ||  ||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || |||||||||||||||||||    
T  10060959 agcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggaga 10060863  T
Q  357 gggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10060862 gggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 10060788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 159 - 430
Target Start/End: Complemental strand, 10063281 - 10063010
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaa 257  Q
    |||||||||| ||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  10063281 aattgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacca 10063182  T
Q  258 agtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggaga 356  Q
    ||  ||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || |||||||||||||||||||    
T  10063181 agcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggaga 10063085  T
Q  357 gggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10063084 gggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 10063010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 159 - 430
Target Start/End: Complemental strand, 10065503 - 10065232
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaa 257  Q
    |||||||||| ||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  10065503 aattgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacca 10065404  T
Q  258 agtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggaga 356  Q
    ||  ||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || |||||||||||||||||||    
T  10065403 agcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggaga 10065307  T
Q  357 gggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10065306 gggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 10065232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 161 - 426
Target Start/End: Complemental strand, 10067700 - 10067435
Alignment:
Q  161 ttgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaag 259  Q
    |||||||| ||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  10067700 ttgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaag 10067601  T
Q  260 tgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggagagg 358  Q
      ||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || |||||||||||||||||||||    
T  10067600 cttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggagagg 10067504  T
Q  359 gaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggagg 426  Q
    |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10067503 gaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggagg 10067435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 191 - 433
Target Start/End: Complemental strand, 45283345 - 45283108
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacac 290  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| || |||||||||||    
T  45283345 gatcgaaccacaccaatacaaagaat---gatgtgtggagcgacggagagcggtaaccaccaaacaaagtgt-ttgtgcaagcaataatcaacaaaacac 45283250  T
Q  291 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggt 390  Q
    ||||||||||||||||||||| | |||| |||||||||  || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |    
T  45283249 cacctagatctaatctaggaaactagtgagaaacacaataca-caatcacaagataaacaaggagagggaagaagaaaacaaaagcaccaagagattgtt 45283151  T
Q  391 cacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  45283150 cactcagttcggtccaaacttgacctactctggaggagagatt 45283108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 214 - 430
Target Start/End: Complemental strand, 54635462 - 54635249
Alignment:
Q  214 aataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaacc 313  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||| | |||||||||| || |||||||||||||||||||||||||||||||| |    
T  54635462 aataatgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaac 54635364  T
Q  314 aagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacacc-aagagattggtcacccagttcggtccaaacttg 412  Q
    ||||| |||||||||  | |||||||||||||||  ||||||||||||||||||||||||  |||| ||||||||| |||||||||||||||||||||||    
T  54635363 aagtgagaaacacaatac-acaatcacaagataa--aaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttg 54635267  T
Q  413 acctactctggaggagag 430  Q
    ||||||||||||||||||    
T  54635266 acctactctggaggagag 54635249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 191 - 430
Target Start/End: Complemental strand, 6716859 - 6716624
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaac-aaaaca 289  Q
    ||||||||||||||||| |||||| |   |||||||||||| ||||| || |||||||||| |||||||||| | |||||||||| || |||| ||||||    
T  6716859 gatcgaaccacaccaatgcaaagagt---gatgtgtggagcaacggaaagcggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaaccaaaaca 6716764  T
Q  290 ccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaa-gagattg 388  Q
    |||||||||||||||||||||| |||||||||||| ||||   ||||||||||||||||  ||| |||||||||||||||||||  |||||| |||||||    
T  6716763 ccacctagatctaatctaggaaacaagtgtgaaactcaaaaatacaatcacaagataaa--aggggagggaagaagaaaacaaaagcaccaaagagattg 6716666  T
Q  389 gtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  6716665 ttcacccagttcggtccaaacttgacctactctggaggagag 6716624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 196 - 433
Target Start/End: Original strand, 7779821 - 7780050
Alignment:
Q  196 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaa-caccacc 294  Q
    |||||||||||||| |||  ||| |||||||||||| | ||||||||||||||||| ||||||||||   |||||||||| || |||||||| || ||||    
T  7779821 aaccacaccaatacgaag--taa-gatgtgtggagcaaaggagagtggtaaccacc-aacaaagtgt---gtgcaagcaataatcaacaaaaacagcacc 7779913  T
Q  295 tagatctaatctaggaaccaagtgtgaaa-cacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggtcac 393  Q
    ||||||||||||||||| ||||||  ||| |||||  || ||| |||||||||||  ||||||||||||| ||||||||| |||||||||||||| ||||    
T  7779914 tagatctaatctaggaaacaagtgaaaaaacacaataca-caagcacaagataaa--aggagagggaagaggaaaacaaagacaccaagagattgttcac 7780010  T
Q  394 ccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||| || |||||||||||||||||||||||||||||||||    
T  7780011 ccactttggtccaaacttgacctactctggaggagagatt 7780050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 218 - 433
Target Start/End: Complemental strand, 801419 - 801214
Alignment:
Q  218 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacac--cacctagatctaatctaggaaccaa 315  Q
    |||||||||||||| | ||| ||| ||||||||  || |||||||   |||||||||| || |||||||| ||  ||||||||||||||||||||| |||    
T  801419 atgatgtgtggagcaaaggaaagtagtaaccact-aataaagtgt---gtgcaagcaataatcaacaaaaaacagcacctagatctaatctaggaaacaa 801324  T
Q  316 gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacc 415  Q
    ||| |||| |||   ||| |  |||||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  801323 gtg-gaaaaaca---caata--cacaagataaa--aggagagggaagaagaaaacaaagacaccaagagattgttcacccagttcggtccaaacttgacc 801232  T
Q  416 tactctggaggagagatt 433  Q
    ||||||||||||||||||    
T  801231 tactctggaggagagatt 801214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 266 - 433
Target Start/End: Original strand, 23200020 - 23200184
Alignment:
Q  266 gtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaag-tgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaa 364  Q
    |||||||||| || |||||| | | ||||||||||||||||||||| |||  ||  ||||||||| || ||| || ||||||||  ||||||||||||||    
T  23200020 gtgcaagcaataatcaacaataaaacacctagatctaatctaggaaacaaaatgaaaaacacaaacca-caagcataagataaa--aggagagggaagaa 23200116  T
Q  365 gaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23200117 gaaaacaaagacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 23200184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 268 - 433
Target Start/End: Original strand, 23197823 - 23197985
Alignment:
Q  268 gcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaag-tgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaaga 366  Q
    |||||||| || |||||| | | ||| ||||||||||||||||| |||  ||  ||||||||| || ||| |||||||||||  ||||||| ||||| ||    
T  23197823 gcaagcaataatcaacaataaaacacatagatctaatctaggaaacaaaatgaaaaacacaaacca-caagcacaagataaa--aggagagagaagagga 23197919  T
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23197920 aaacaaagacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 23197985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 433
Target Start/End: Original strand, 19683774 - 19683935
Alignment:
Q  269 caagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaaga 366  Q
    ||||||| || |||||| |||| |||||||||||||||||||||  || |||  ||||||||| | |||| || ||||||||  |||||||  ||||       
T  19683774 caagcaataatcaacaataacagcacctagatctaatctaggaataaaagtgaaaaacacaaaaccacaagcaaaagataaa--aggagag--aagagag 19683869  T
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  19683870 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactatggaggagagatt 19683935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 9636106 - 9636172
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| |||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  9636106 aaacaaacacaccaagagattgttcacccagttcggttcaaacttgacctactttggaggagagatt 9636172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 7762437 - 7762387
Alignment:
Q  383 agattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7762437 agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 7762387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 9581454 - 9581404
Alignment:
Q  383 agattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9581454 agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 9581404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 37408645 - 37408580
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  37408645 aaacaaacacaccaa-agattgttcacccagttcgatccaaacttgacctactctggaggagagatt 37408580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 43401789 - 43401847
Alignment:
Q  375 acaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  43401789 acaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagagatt 43401847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 45095350 - 45095285
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  45095350 aaacaaatacgccaa-agattgttcacccagttcggtccaaacttgacctactctagaggagagatt 45095285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 433
Target Start/End: Complemental strand, 7764747 - 7764586
Alignment:
Q  269 caagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaaga 366  Q
    ||||||| || |||||| |||| |||||||||||||||| |||| ||| |||  || |||||| | |||| || ||||||||  |||||||  ||||       
T  7764747 caagcaataatcaacaataacagcacctagatctaatcttggaatcaaagtgaaaagcacaaaaccacaaacaaaagataaa--aggagag--aagagag 7764652  T
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  7764651 aaacaaacacaccaa-agattgttcacccagttcggtctaaatttgacctactctggaggagagatt 7764586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 5258125 - 5258190
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  5258125 aaacaaacacaccaa-agattgttcaccaagttcggtccaaacttgacctactctggagaagagatt 5258190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 433
Target Start/End: Original strand, 43403736 - 43403790
Alignment:
Q  379 caagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  43403736 caagagattgttcacccagttcggtccaaccatgacctactctggaggagagatt 43403790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 49199457 - 49199515
Alignment:
Q  375 acaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||| |||||||||||||||||| | ||||||| |||||||||||||||    
T  49199457 acaccaagagattgttcacccagttcggtccaaccatgacctagtctggaggagagatt 49199515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 433
Target Start/End: Complemental strand, 34491397 - 34491334
Alignment:
Q  368 aacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  34491397 aacaaacacaccaa-agattgttcacccagttcggtccaa-cttgacctactctggaggagagatt 34491334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 5260304 - 5260369
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||| |||||||||||||||||||||||| ||||| |||||||    
T  5260304 aaacaaacacaccaa-agattgttcaccaagttcggtccaaacttgacctactttggagaagagatt 5260369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 33309739 - 33309661
Alignment:
Q  41 ttatatgaggatgaaaaca-cccgttttattttttaatgactaaaatcaaatttc-gttatatttttaaggacgaaaaa 117  Q
    |||| |||||||||||||| ||||||||||||||||  ||||||||||||| |||  ||||||||||| ||||||||||    
T  33309739 ttatgtgaggatgaaaacatcccgttttattttttagggactaaaatcaaaattcacttatatttttagggacgaaaaa 33309661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 33309950 - 33310026
Alignment:
Q  46 tgaggatgaaaacaccc-gttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||||||||||| |||||||||||||  ||||||||| ||| |||| ||||| |||| ||| ||||||||||    
T  33309950 tgaggatgaaaacaccccgttttattttttagggactaaaataaaaattcgctatatatttagggaagaaaaactta 33310026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 49745797 - 49745721
Alignment:
Q  46 tgaggatgaaaaca-cccgttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||| ||||||||| |||||||||||||||||  |||||||||||| ||| ||||||||||||| |  |||||||||    
T  49745797 tgagaatgaaaacatcccgttttattttttaaatactaaaatcaaaattcattatatttttaagcaacaaaaactta 49745721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 16499215 - 16499151
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||| |||||| | |||||||||||||||| ||| ||||||||||| |||||||||    
T  16499215 aaacaaatacaccaa-agattgttgacccagttcggtccaa-cttaacctactctgggggagagatt 16499151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 433
Target Start/End: Complemental strand, 40913472 - 40913415
Alignment:
Q  375 acaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||| | |||||||||||||| ||||||||||| ||||| |||||||||    
T  40913472 acaccaagagattgttgacccagttcggtcc-aacttgacctaatctgggggagagatt 40913415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 392 - 433
Target Start/End: Complemental strand, 4570115 - 4570074
Alignment:
Q  392 acccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  4570115 acccagttcggtccaaacttcacctactctggagtagagatt 4570074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 368 - 433
Target Start/End: Complemental strand, 40735568 - 40735505
Alignment:
Q  368 aacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  40735568 aacaaatacaccaa-agattgctgacccagttcggtccaa-cttgacctaatctgggggagagatt 40735505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 25693380 - 25693304
Alignment:
Q  46 tgaggatgaaaacacc-cgttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||||||||||||||| ||||||||||| ||| ||| ||||||||| |  |||||| || || ||||||||||||||    
T  25693380 tgaggatgaaaacacctcgttttattttataaggaccaaaatcaaaatatgttataattatagggacgaaaaactta 25693304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 6095603 - 6095645
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  6095603 tcacacagttcggtccaa-cttgacctactctggaggagagatt 6095645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 28260014 - 28260071
Alignment:
Q  63 gttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||| ||||||||| ||||||||||||| || | |||||||||| ||||||||||||||    
T  28260014 gtttaattttttaa-gactaaaatcaaaatttgctatatttttagggacgaaaaactta 28260071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 52275147 - 52275220
Alignment:
Q  48 aggatgaaaacacc-cgttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||||||||||||| ||||||||||| ||| ||||||| ||||| |  ||||||||| | |||||||||||||||    
T  52275147 aggatgaaaacacctcgttttattttataaggactaaactcaaaatctgttatatttat-aggacgaaaaactta 52275220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 51107738 - 51107685
Alignment:
Q  68 attttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||  ||||||||||||| || ||||||||||||||||| || ||||||    
T  51107738 attttttagcgactaaaatcaaaatttgttatatttttaaggacaaagaactta 51107685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 54141441 - 54141384
Alignment:
Q  64 ttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||||||||||||  |||| ||||||| |||| |||||||||| ||| ||||||||||    
T  54141441 ttttattttttaagaactacaatcaaaattcgctatatttttatggaagaaaaactta 54141384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 16024809 - 16024885
Alignment:
Q  46 tgaggatgaaaacacc-cgttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||||||||||||| | | ||||||||||||  ||||||||||||| || | ||||||| || ||||||| ||||||    
T  16024809 tgaggatgaaaacatctcattttattttttagggactaaaatcaaaatttgatatatttatagggacgaataactta 16024885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 161 - 433
Target Start/End: Complemental strand, 25421699 - 25421428
Alignment:
Q  161 ttgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 260  Q
    |||||||| |||||||   |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25421699 ttgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 25421600  T
Q  261 gtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagaggga 360  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  25421599 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaag--gaggga 25421502  T
Q  361 agaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25421501 agaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 25421428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 160 - 433
Target Start/End: Complemental strand, 6027640 - 6027369
Alignment:
Q  160 attgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaag 259  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |    
T  6027640 attgttgtgaatccccggatctccaagactggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagaggggtaaccacctaacaagg 6027541  T
Q  260 tgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagaggg 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |  |||||    
T  6027540 tgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaa-atg--gaggg 6027444  T
Q  360 aagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||| | |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  6027443 aagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacatactctggaggagagatt 6027369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 160 - 430
Target Start/End: Complemental strand, 13154310 - 13154040
Alignment:
Q  160 attgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    ||||||||| |||| |||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13154310 attgttgtgaatcctcggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaa 13154211  T
Q  259 gtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagg 358  Q
    |  ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  13154210 gcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagg 13154113  T
Q  359 gaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13154112 gaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 13154040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 160 - 430
Target Start/End: Original strand, 33341876 - 33342148
Alignment:
Q  160 attgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    ||||||||| ||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33341876 attgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaa 33341975  T
Q  259 gtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaac-aaggaga 356  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||||||||| |||||||    
T  33341976 gcttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaa--acaaagcaactaaacacaagataaacaaaggaga 33342073  T
Q  357 gggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33342074 gggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 33342148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 162 - 430
Target Start/End: Complemental strand, 34167472 - 34167205
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| |||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       
T  34167472 tgttgtgaatccccgagcctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaaaaa 34167373  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  34167372 tattgagcaagcaaaaaacaacaaaacaccacctagatcaaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagggaa 34167275  T
Q  362 gaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    ||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34167274 gaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagag 34167205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 159 - 430
Target Start/End: Complemental strand, 34165254 - 34164983
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaa 257  Q
    |||||||||| ||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  34165254 aattgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacca 34165155  T
Q  258 agtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac-aatcacaagataaacaaggaga 356  Q
    ||  ||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||  |||||||||| || |||||||||||||||||||    
T  34165154 agcttattgagcaagcaagaaacaac-aaacaccacctagatccaatctaggaaacaagtgtgaa--acaaagcaactaaacacaagataaacaaggaga 34165058  T
Q  357 gggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34165057 gggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 34164983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 191 - 430
Target Start/End: Original strand, 16578327 - 16578561
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacac 290  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||||| ||||||||||   |||||||||| ||||||||||||||    
T  16578327 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgt---gtgcaagcaacaaacaacaaaacac 16578421  T
Q  291 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacacc-aagagattgg 389  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  16578422 cacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgt 16578520  T
Q  390 tcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16578521 tcacccagttcggtccaaacttgacctactctggaggagag 16578561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 191 - 430
Target Start/End: Complemental strand, 16617053 - 16616819
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacac 290  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||||| ||||||||||   |||||||||| ||||||||||||||    
T  16617053 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgt---gtgcaagcaacaaacaacaaaacac 16616959  T
Q  291 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacacc-aagagattgg 389  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  16616958 cacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgt 16616860  T
Q  390 tcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16616859 tcacccagttcggtccaaacttgacctactctggaggagag 16616819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 191 - 430
Target Start/End: Complemental strand, 16653471 - 16653237
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacac 290  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||||| ||||||||||   |||||||||| ||||||||||||||    
T  16653471 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgt---gtgcaagcaacaaacaacaaaacac 16653377  T
Q  291 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacacc-aagagattgg 389  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  16653376 cacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgt 16653278  T
Q  390 tcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16653277 tcacccagttcggtccaaacttgacctactctggaggagag 16653237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 191 - 430
Target Start/End: Complemental strand, 16555228 - 16554994
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacac 290  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||||| ||||||||||   |||||||||| ||||||||||||||    
T  16555228 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgt---gtgcaagcaacaaacaacaaaacac 16555134  T
Q  291 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacacc-aagagattgg 389  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  16555133 cacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgt 16555035  T
Q  390 tcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  16555034 tcacccagttcggtccaaacttgacctactttggaggagag 16554994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 191 - 430
Target Start/End: Complemental strand, 16631784 - 16631550
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacac 290  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||||| ||||||||||   |||||||||| ||||||||||||||    
T  16631784 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgt---gtgcaagcaacaaacaacaaaacac 16631690  T
Q  291 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacacc-aagagattgg 389  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  16631689 cacctagatctaatctaggaaacaagtgtgaaacacaaagc-acaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgt 16631591  T
Q  390 tcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  16631590 tcacccagttcggtccaaacttgacctactttggaggagag 16631550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 191 - 430
Target Start/End: Complemental strand, 27648210 - 27647985
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacac 290  Q
    |||||||||||||||||||||     ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||||| || |||||||||||    
T  27648210 gatcgaaccacaccaatacaag----aatgatgtgtggagcaaaggagagtggtaaccaccgaacaaagtgtgt-gtgcaagcaataatcaacaaaacac 27648116  T
Q  291 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggt 390  Q
    ||||||||||||||||||||| |||||| ||||| ||       |  ||||||||||  ||||||||||||||||||||||||  ||||||||||||| |    
T  27648115 cacctagatctaatctaggaaacaagtgagaaactca-------atacacaagataa--aaggagagggaagaagaaaacaaaagcaccaagagattgtt 27648025  T
Q  391 cacccagttcggtccaaacttgacctactctggaggagag 430  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  27648024 cacccagttcggtccaaacttgatctactctggaggagag 27647985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 162 - 299
Target Start/End: Original strand, 6136079 - 6136216
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| ||||||||| |||||||  |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  6136079 tgttgtgaatccccggacctccaaggccggatcgaaccataccaatacaaagaataatgatgtgtggagcaacggagagtggtaaccaccaaacaaagtg 6136178  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagat 299  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6136179 tattgtgcaagcaagaaacaacaaaacaccacctagat 6136216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 218 - 433
Target Start/End: Original strand, 3072596 - 3072805
Alignment:
Q  218 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaac-accacctagatctaatctaggaaccaag 316  Q
    |||||||||||||| | ||| ||| ||||||||  ||||||||||   |||||||||| || ||||||||  | ||| ||||||||||||||||| ||||    
T  3072596 atgatgtgtggagcaaaggaaagtagtaaccact-aacaaagtgt---gtgcaagcaataatcaacaaaaatagcacatagatctaatctaggaaacaag 3072691  T
Q  317 tgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacct 416  Q
    ||  || || ||| || ||| |||||||||||  ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  3072692 tgaaaagcataaaaca-caagcacaagataaa--aggagagggaagaggaaaacaaagacaccaagagattgttcacccagttcggtccaaacttgacct 3072788  T
Q  417 actctggaggagagatt 433  Q
    |||||||||||||||||    
T  3072789 actctggaggagagatt 3072805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 286 - 433
Target Start/End: Complemental strand, 412369 - 412224
Alignment:
Q  286 aacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaa-gag 384  Q
    |||| ||||||||||||||||||| | ||||||  ||||||||  || ||| |||||||||||  ||||||||||||||||||||||||||||||| |||    
T  412369 aacagcacctagatctaatctaggtaacaagtgaaaaacacaataca-caagcacaagataaa--aggagagggaagaagaaaacaaatacaccaaagag 412273  T
Q  385 attggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  412272 attgttcacccagttcggtccaaacttgacctactctggaggagagatt 412224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 217 - 433
Target Start/End: Original strand, 6097285 - 6097497
Alignment:
Q  217 aatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaa-caccacctagatctaatctaggaaccaa 315  Q
    ||||||||||||||| ||||| ||| ||||||||  ||||||||||   |||||||| | || |||||||| || ||||| ||||||||||||| | |||    
T  6097285 aatgatgtgtggagcaacggaaagtagtaaccact-aacaaagtgt---gtgcaagctataatcaacaaaaacagcaccttgatctaatctaggtaacaa 6097380  T
Q  316 gtgtgaaa-cacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaa-gagattggtcacccagttcggtccaaacttga 413  Q
    |||  ||| |||||  || |||||||||||||  ||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  6097381 gtggaaaaacacaataca-caatcacaagata--caaggagagggaagaggaaaacaaagacaccaaagagattgttcacccagttcggtccaaacttga 6097477  T
Q  414 cctactctggaggagagatt 433  Q
    ||||||||||||||||||||    
T  6097478 cctactctggaggagagatt 6097497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 13159166 - 13159051
Alignment:
Q  160 attgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    ||||||||| |||| |||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13159166 attgttgtgaatcctcggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaa 13159067  T
Q  259 gtgtattgtgcaagca 274  Q
    |  ||||| |||||||    
T  13159066 gcttattgagcaagca 13159051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 218 - 433
Target Start/End: Original strand, 2171366 - 2171578
Alignment:
Q  218 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa- 315  Q
    |||||||||||||| | ||| ||| ||||||||  ||||||||||   |||||||||| || |||||| |||| ||||||||||||||||||||| |||     
T  2171366 atgatgtgtggagcaaaggaaagtagtaaccact-aacaaagtgt---gtgcaagcaataatcaacaataacagcacctagatctaatctaggaatcaaa 2171461  T
Q  316 gtgtgaaa---cacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggtcacccagttcggtccaaacttg 412  Q
    |||  |||   || ||| || ||| |||||||||||  ||| ||| |||||   |||||||||||||||||||||| |||||||||||||||||||||||    
T  2171462 gtgaaaaaaaacataaaaca-caagcacaagataaa--agg-gagagaagagataaacaaatacaccaagagattgttcacccagttcggtccaaacttg 2171557  T
Q  413 acctactctggaggagagatt 433  Q
    |||||||||||||||||||||    
T  2171558 acctactctggaggagagatt 2171578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 16452310 - 16452375
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16452310 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 16452375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 5406181 - 5406246
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  5406181 aaacaaacacaccaa-agattgttcacccagttcggttcaaacttgacctactctggaggagagatt 5406246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 5410506 - 5410571
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  5410506 aaacaaacacaccaa-agattgttcacccagttcggttcaaacttgacctactctggaggagagatt 5410571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 30834517 - 30834582
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  30834517 aaacaaacacaccaa-agattattcacccagttcggtccaaacttgacctactctggaggagagatt 30834582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 31404656 - 31404721
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  31404656 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttggcctactctggaggagagatt 31404721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 5409051 - 5409115
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  5409051 aaacaaacacaccaa-agattgttcacc-agttcggtccaaacttgacctactctggaggagagatt 5409115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 5413376 - 5413440
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  5413376 aaacaaacacaccaa-agattgttcacc-agttcggtccaaacttgacctactctggaggagagatt 5413440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 433
Target Start/End: Original strand, 33160254 - 33160398
Alignment:
Q  286 aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagag 384  Q
    |||| |||||||||||||||||| || ||| |||  || |||||| | |||| || |||||||| ||||||||  ||||   ||||||| ||||||| ||    
T  33160254 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaaacaaaagataaa-aaggagag--aagagagaaacaaacacaccaa-ag 33160349  T
Q  385 attggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| |||||||||| |||||||||||||  ||||||||||||||||||    
T  33160350 attgttcacccagtttggtccaaacttgaaatactctggaggagagatt 33160398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 433
Target Start/End: Original strand, 3808699 - 3808754
Alignment:
Q  378 ccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||| ||||| |||||||||||| | |||||||||||||||||||||||    
T  3808699 ccaagagattgttcacctagttcggtccaatcatgacctactctggaggagagatt 3808754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 17763155 - 17763112
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  17763155 tcacctagttcggtccaaacttgatctactctggaggagagatt 17763112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 21589095 - 21589053
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  21589095 tcacccagttcggtccaa-cttgacctactctggaggagagatt 21589053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 21593828 - 21593786
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  21593828 tcacccagttcggtccaa-cttgacctactctggaggagagatt 21593786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 16569208 - 16569144
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| | |||||||||||||||| ||||||||| |||||||||||||||    
T  16569208 aaacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctaatctggaggagagatt 16569144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 12754074 - 12754032
Alignment:
Q  79 actaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||||||||||| |||| || ||||||||||||||||||||||    
T  12754074 actaaaatcaaaattcgctaaatttttaaggacgaaaaactta 12754032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 33211182 - 33211231
Alignment:
Q  383 agattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| | |||||||||||||||| ||||||||||||||| |||||||||    
T  33211182 agattgttgacccagttcggtccaa-cttgacctactctgggggagagatt 33211231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 9183015 - 9183077
Alignment:
Q  369 acaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||| ||||||| |||||| | |||||||||||||||| |||||| || |||||||||||||||    
T  9183015 acaaacacaccaa-agattgttgacccagttcggtccaa-cttgacataatctggaggagagatt 9183077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 431
Target Start/End: Original strand, 21356021 - 21356084
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagaga 431  Q
    ||||||| ||||||| |||||| | |||||||||||||| ||  ||||||| |||||||||||||    
T  21356021 aaacaaacacaccaaaagattgttgacccagttcggtcc-aatatgacctaatctggaggagaga 21356084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 162 - 433
Target Start/End: Complemental strand, 8395996 - 8395725
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  8395996 tgttgtgaatccccggacctccaagaccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagtt 8395897  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||    
T  8395896 tattgtgcaagcaaaaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataca-atggagagggaa 8395798  T
Q  362 gaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8395797 gaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 8395725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 159 - 433
Target Start/End: Complemental strand, 8393790 - 8393516
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    |||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  8393790 aattgttgtgaatccccggacctcaaagaccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacgaa 8393691  T
Q  259 gtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagg 358  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||    
T  8393690 gtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataca-atggagagg 8393592  T
Q  359 gaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8393591 gaagaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 8393516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 162 - 433
Target Start/End: Complemental strand, 7125294 - 7125024
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| ||||||| | |||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7125294 tgttgtgaatccccgaacctccaaggccggatcgaaccacaccaatataaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 7125195  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  7125194 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaag--gagggaa 7125097  T
Q  362 gaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||| | |||| ||||||||| |||||||||||||||    |||||||||||||||||||||||||    
T  7125096 gaagaaaacaataaacacaaagagattgttcacccagttcggtctttgcttgacctactctggaggagagatt 7125024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 159 - 433
Target Start/End: Complemental strand, 7123078 - 7122805
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    |||||||||| ||||||| | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7123078 aattgttgtgaatccccgaacctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 7122979  T
Q  259 gtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagg 358  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  7122978 gtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaag--gagg 7122881  T
Q  359 gaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||| | |||| |||| |||| |||||||||||||||    ||||||||||| |||||||||||||    
T  7122880 gaagaagaaaacaataaacacaaagaaattgttcacccagttcggtctttgcttgacctactatggaggagagatt 7122805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 159 - 430
Target Start/End: Complemental strand, 5136462 - 5136190
Alignment:
Q  159 aattgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaa 257  Q
    |||||||||| ||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5136462 aattgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaa 5136363  T
Q  258 agtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac--aatcacaagataaacaaggag 355  Q
    ||  ||||| |||||||||| ||||||||||| || |||||||||||||||||||||||||||||  ||||||||||  || ||||||||||||||||||    
T  5136362 agcttattgagcaagcaagagacaacaaaacatca-ctagatctaatctaggaaccaagtgtgaa--acaaagcaaccaaaacacaagataaacaaggag 5136266  T
Q  356 agggaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5136265 agggaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 5136190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 162 - 430
Target Start/End: Complemental strand, 5138684 - 5138415
Alignment:
Q  162 tgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 260  Q
    ||||||| ||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  5138684 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 5138585  T
Q  261 gtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaac--aatcacaagataaacaaggagagg 358  Q
     ||||| |||||||||| ||||||||||| || |||||||||||||||||||||||||||||  ||||||||||  || |||||||||||||||||||||    
T  5138584 ttattgagcaagcaagagacaacaaaacatca-ctagatctaatctaggaaccaagtgtgaa--acaaagcaaccaaaacacaagataaacaaggagagg 5138488  T
Q  359 gaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5138487 gaagaagaaaacaataaacacaaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 5138415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 24789765 - 24789657
Alignment:
Q  15 tcattaaggactagaaacaaatcaatttatatgaggatgaaaacaccc-gttttattttttaatgactaaaatcaaatttcgttatatttttaaggacga 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24789765 tcattaaggactagaaacaaatcaatttatatgaggatgaaaacaccccgttttattttttaaggactaaaatcaaatttcgttatatttttaaggacga 24789666  T
Q  114 aaaacttac 122  Q
    |||||||||    
T  24789665 aaaacttac 24789657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 24818494 - 24818602
Alignment:
Q  15 tcattaaggactagaaacaaatcaatttatatgaggatgaaaacaccc-gttttattttttaatgactaaaatcaaatttcgttatatttttaaggacga 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24818494 tcattaaggactagaaacaaatcaatttatatgaggatgaaaacaccccgttttattttttaaggactaaaatcaaatttcgttatatttttaaggacga 24818593  T
Q  114 aaaacttac 122  Q
    |||||||||    
T  24818594 aaaacttac 24818602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 218 - 433
Target Start/End: Original strand, 31495143 - 31495362
Alignment:
Q  218 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaa-g 316  Q
    |||||||||||||| | ||| ||| ||||||| | |||||||||| | |||||||||| || |||||||||| ||||||||||||||||||||| ||| |    
T  31495143 atgatgtgtggagcaaaggaaagtagtaaccatc-aacaaagtgtgt-gtgcaagcaataatcaacaaaacagcacctagatctaatctaggaaacaaag 31495240  T
Q  317 tgtgaaacacaaagcaacaatcacaagataaac------aaggagagggaagaagaaaacaaatacaccaagagattggtcacccagttcggtccaaact 410  Q
    ||  || || ||| || ||| |||||||||||       |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||    
T  31495241 tgaaaagcataaaaca-caagcacaagataaaaggataaaaggagagggaagaggaaaacaaagacaccaagagattgttcacccagttcggtccaaact 31495339  T
Q  411 tgacctactctggaggagagatt 433  Q
    |||||||||||||||||||||||    
T  31495340 tgacctactctggaggagagatt 31495362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 56178618 - 56178683
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  56178618 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 56178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 433
Target Start/End: Original strand, 5369968 - 5370129
Alignment:
Q  269 caagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaaga 366  Q
    ||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||| | |||| || ||||||||  |||||||  ||||       
T  5369968 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaa--aggagag--aagagat 5370063  T
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||| ||| |||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  5370064 aaacaaacacatcaa-agattgttcactcagttcggtccaaacttgacctactctggaggagagatt 5370129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 433
Target Start/End: Complemental strand, 2209894 - 2209836
Alignment:
Q  375 acaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  2209894 acaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagagatt 2209836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 13992274 - 13992339
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  13992274 aaacaaacacaccaa-agattgttcacctagttcggtccaaacttgacctactctggaggagagatt 13992339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 48143230 - 48143165
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  48143230 aaacaaacacaccaa-agattgttcacccagtttggtccaaacttgacctactctggaggagagatt 48143165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 29999809 - 29999852
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29999809 tcacccagttcggtccaaacttgacctactctggaggagagatt 29999852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 50262689 - 50262747
Alignment:
Q  375 acaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||| ||||||||||||||||||   ||||||||||||||||| |||||    
T  50262689 acaccaagagattgttcacccagttcggtccaacaatgacctactctggaggaaagatt 50262747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 52095344 - 52095408
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  52095344 aaacaaacacaccaaaa-attgttcacccagttcggtccaaacttg-cctactctggaggagagatt 52095408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 5521527 - 5521584
Alignment:
Q  64 ttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||||||| ||||||||||||| |||| ||||||| || ||||||||||||||    
T  5521527 ttttattttttaaggactaaaatcaaaattcgctatatttatagggacgaaaaactta 5521584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 431
Target Start/End: Original strand, 52082645 - 52082708
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagaga 431  Q
    ||||||| ||||||| |||||| |||||||  |||||| ||||||||||||||||||||||||||    
T  52082645 aaacaaacacaccaa-agattgttcacccaaatcggtctaaacttgacctactctggaggagaga 52082708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 41964580 - 41964538
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  41964580 tcacccagttcggtccaa-cttgacctactctggaggagagatt 41964538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 44340962 - 44341037
Alignment:
Q  47 gaggatgaaaaca-cccgttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||||| |||||| ||| ||||||||||||  ||||||||||| | |||||||| ||||| |||||||||||||||    
T  44340962 gaggattaaaacaaccctttttattttttagggactaaaatcagaattcgttatgttttttaggacgaaaaactta 44341037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 8648303 - 8648261
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  8648303 tcacccagtttggtccaa-cttgacctactctggaggagagatt 8648261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 41639590 - 41639548
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  41639590 tcactcagttcggtccaa-cttgacctactctggaggagagatt 41639548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 50673851 - 50673893
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  50673851 tcacctagttcggtccaa-cttgacctactctggaggagagatt 50673893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 47038393 - 47038457
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| | |||||||||||||| |||||||| |||||||| |||||||||    
T  47038393 aaacaaacacaccaa-agattgttgacccagttcggtcc-aacttgacttactctgggggagagatt 47038457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 48893620 - 48893684
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  48893620 aaacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctaatctgggggagagatt 48893684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 52132021 - 52131915
Alignment:
Q  17 attaaggactagaaacaaa-tcaatttatatgaggatgaaaacacccgttttattttttaatg-actaaaatcaaatttcgttatatttttaaggacgaa 114  Q
    ||||||||| | ||||||| | ||||| | ||||||||||||||  | ||||| ||||| ||| |||||||||||| |||||||||||| || ||||| |    
T  52132021 attaaggaccaaaaacaaaataaatttttgtgaggatgaaaacattcattttaattttttatggactaaaatcaaaattcgttatatttgtagggacgga 52131922  T
Q  115 aaactta 121  Q
     ||||||    
T  52131921 taactta 52131915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 433
Target Start/End: Complemental strand, 54883199 - 54883142
Alignment:
Q  375 acaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||| |||| | |||||||||||||| |||||||| || |||||||||||||||    
T  54883199 acaccaagaaattgttgacccagttcggtcc-aacttgacttaatctggaggagagatt 54883142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 433
Target Start/End: Original strand, 12739533 - 12739596
Alignment:
Q  368 aacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  12739533 aacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctaatctgggggagagatt 12739596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 15186919 - 15186862
Alignment:
Q  64 ttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||||||| ||||  |||||||||||| || | |||||||||| ||||||||||||||    
T  15186919 ttttatttgttaagaactaaaatcaaactttgatatatttttagggacgaaaaactta 15186862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 433
Target Start/End: Original strand, 26175619 - 26175682
Alignment:
Q  368 aacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  26175619 aacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctaatctgggggagagatt 26175682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 38852038 - 38851981
Alignment:
Q  64 ttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||||||| || |||||||||| ||  |||||||||||  |||||||||||||    
T  38852038 ttttattttttaaggattaaaatcaaaatttattatatttttagagacgaaaaactta 38851981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 51203285 - 51203228
Alignment:
Q  64 ttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||||||  ||||||||||||| ||||  |||||| || ||||||||||||||    
T  51203285 ttttattttttagggactaaaatcaaaattcgcaatatttatagggacgaaaaactta 51203228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 53933422 - 53933365
Alignment:
Q  64 ttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    |||||||||| |  ||||| ||||||| |||||||||||| |||||| ||||||||||    
T  53933422 ttttatttttcagagactataatcaaaattcgttatatttgtaaggatgaaaaactta 53933365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 162 - 433
Target Start/End: Complemental strand, 44204024 - 44203754
Alignment:
Q  162 tgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtg 261  Q
    ||||||| |||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  44204024 tgttgtgaatccccgagcctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagtt 44203925  T
Q  262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaa 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  44203924 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagggaa 44203827  T
Q  362 gaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44203826 gaagaaaacaataaacacaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 44203754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 191 - 433
Target Start/End: Complemental strand, 9036775 - 9036538
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacac 290  Q
    ||||||||||||||||| ||||| ||   |||||||||||| | ||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  9036775 gatcgaaccacaccaatgcaaaggat---gatgtgtggagctaaggagagtggtaaccaccaaacaaagtgt-ttgtgcaagcaacaaacaacaaaacac 9036680  T
Q  291 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggt 390  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9036679 cacctagatctaatctaggaaacaagtgtgaaacacaaagca-caatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattgtt 9036581  T
Q  391 cacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  9036580 cacccagttcggtccaaacttgacctactctcgaggagagatt 9036538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 192 - 430
Target Start/End: Complemental strand, 21054314 - 21054083
Alignment:
Q  192 atcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacacc 291  Q
    ||||||||||||||||||||  |||| ||||||||||||| | ||||||||||||||||| ||| ||||||   |||||||||| || ||||||||||||    
T  21054314 atcgaaccacaccaatacaagaaata-tgatgtgtggagcaaaggagagtggtaaccaccaaactaagtgt---gtgcaagcaataatcaacaaaacacc 21054219  T
Q  292 acctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggtc 391  Q
    |||||||||||||||||||| |||||| |||||||||  || |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  21054218 acctagatctaatctaggaaacaagtgagaaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaaatacaccaagagattggtc 21054122  T
Q  392 acccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21054121 acccagttcggtccaaacttgacctactctggaggagag 21054083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 192 - 433
Target Start/End: Complemental strand, 9987558 - 9987323
Alignment:
Q  192 atcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacacc 291  Q
    |||||||||||||||||| || |||| ||||||||||||| | ||||||||||||||||| | ||||||||   |||||||||| || ||||||||||||    
T  9987558 atcgaaccacaccaatacgaaaaata-tgatgtgtggagcaaaggagagtggtaaccaccaatcaaagtgt---gtgcaagcaataatcaacaaaacacc 9987463  T
Q  292 acctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaat-acaccaagagattggt 390  Q
    |||||||||||||||||||| |||||| ||||||| |  || |||||||||||||||  |||||||||||||||||||||||  |||||||||||||| |    
T  9987462 acctagatctaatctaggaaacaagtgagaaacactataca-caatcacaagataaa--aggagagggaagaagaaaacaaaagacaccaagagattgtt 9987366  T
Q  391 cacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9987365 cacccagttcggtccaaacttgacctactctggaggagagatt 9987323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 218 - 433
Target Start/End: Complemental strand, 40282711 - 40282499
Alignment:
Q  218 atgatgtgtggagcgacggagagtggtaaccaccgaa-caaagtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaag 316  Q
    |||||||||||||| | ||||||||||||||||| || |||||||| | |||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  40282711 atgatgtgtggagcaaaggagagtggtaaccaccaaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaag 40282613  T
Q  317 tgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacct 416  Q
    || |||||||||  || |||||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  40282612 tgagaaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaaagacaccaagagattgttcacccagttcggtccaaacttgacct 40282516  T
Q  417 actctggaggagagatt 433  Q
    |||||||||||||||||    
T  40282515 actctggaggagagatt 40282499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 218 - 433
Target Start/End: Original strand, 20622072 - 20622283
Alignment:
Q  218 atgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagt 317  Q
    |||||||||||||| | ||| ||| ||||||||| |||||||||| | |||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  20622072 atgatgtgtggagcaaaggaaagtagtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagt 20622170  T
Q  318 gtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgaccta 417  Q
    | |||||||||  || |||||||||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  20622171 gagaaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaaagacaccaagagattgttcacccagttcggtccaaacttgaccta 20622267  T
Q  418 ctctggaggagagatt 433  Q
    ||||||||||||||||    
T  20622268 ctctggaggagagatt 20622283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 266 - 433
Target Start/End: Complemental strand, 51765684 - 51765519
Alignment:
Q  266 gtgcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaaga 363  Q
    |||||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||| || ||| |||||||||||  |||||||||||||    
T  51765684 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaacca-caagcacaagataaa--aggagagggaaga 51765588  T
Q  364 agaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
     ||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  51765587 ggaaaacaaagacaccaa-agattgttcacccagttcggtccaaacttgtcctactctggaggagagatt 51765519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 269 - 433
Target Start/End: Original strand, 8550670 - 8550833
Alignment:
Q  269 caagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaaga-ag 365  Q
    ||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  |||||||||   |||| ||||||||||| |  |||| | |||| ||    
T  8550670 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaatcacaagcacaagataaaga--gagaag-aagagag 8550766  T
Q  366 aaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8550767 aaaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 8550833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 3189517 - 3189452
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  3189517 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggatgagagatt 3189452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 3198334 - 3198269
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  3198334 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggatgagagatt 3198269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 3207173 - 3207108
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  3207173 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggatgagagatt 3207108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 13316348 - 13316398
Alignment:
Q  383 agattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13316348 agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 13316398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 20762859 - 20762794
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  20762859 aaacaaacacaccaa-agattggtcacctagttcggtccaaacttgacctactctgtaggagagatt 20762794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 42297963 - 42298021
Alignment:
Q  375 acaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  42297963 acaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagagatt 42298021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 29136412 - 29136369
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  29136412 tcacctagttcggtccaaacttgacctactctggaggagagatt 29136369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 13547093 - 13547135
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  13547093 tcacccagttcggtccaa-cttgacctactctggaggagagatt 13547135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 13549004 - 13549046
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  13549004 tcacccagttcggtccaa-cttgacctactctggaggagagatt 13549046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 37168462 - 37168420
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  37168462 tcacccagttcggtccaa-cttgacctactctggaggagagatt 37168420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 13659318 - 13659382
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||| |||||| | |||||||||||||||| ||| ||||||||||| |||||||||    
T  13659318 aaacaaatacaccaa-agattgttgacccagttcggtccaa-cttaacctactctgggggagagatt 13659382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 834149 - 834212
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagat 432  Q
    ||||||| ||||||| |||||| | |||||||||||||||| ||||||||||||||| ||||||||    
T  834149 aaacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctactctgggggagagat 834212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 27086253 - 27086329
Alignment:
Q  46 tgaggatgaaaacaccc-gttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||||||||  | |||| ||||||||| ||||||||||| | || ||||||||| |||||| ||||||||||    
T  27086253 tgaggatgaaaacattcagtttaattttttaaggactaaaatcagaatttgttatatttataaggatgaaaaactta 27086329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 10840488 - 10840546
Alignment:
Q  46 tgaggatgaaaaca-cccgttttattttttaatgactaaaatcaaatttcgttatatttt 104  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||| || ||||||||||    
T  10840488 tgaggatgaaaacatcccgtttta-tttttaaggactaaaatcaaaatttgttatatttt 10840546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 11348862 - 11348820
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  11348862 tcactcagttcggtccaa-cttgacctactctggaggagagatt 11348820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 28242469 - 28242426
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||||   |||||||||||||||||||||||    
T  28242469 tcacccagttcggtccaacaatgacctactctggaggagagatt 28242426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 47255343 - 47255386
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||||   |||||||||||||||||||||||    
T  47255343 tcacccagttcggtccaacaatgacctactctggaggagagatt 47255386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 4552619 - 4552683
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| | |||||||||||||||| ||||||||||||||  |||||||||    
T  4552619 aaacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctactctgagggagagatt 4552683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 28265536 - 28265600
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  28265536 aaacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctaatctgggggagagatt 28265600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 433
Target Start/End: Complemental strand, 34603740 - 34603699
Alignment:
Q  391 cacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  34603740 cacctagttcggtccaa-cttgacctactctggaggagagatt 34603699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 37033068 - 37033118
Alignment:
Q  383 agattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| |||||||||||||||||| | ||||||||| ||||| |||||||    
T  37033068 agattgttcacccagttcggtccaaccatgacctactatggagaagagatt 37033118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 46065104 - 46065040
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| | |||||||||| ||||| ||||||||||||||| |||||||||    
T  46065104 aaacaaacacaccaa-agattgtttacccagttcgatccaa-cttgacctactctgggggagagatt 46065040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 28220210 - 28220272
Alignment:
Q  369 acaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  28220210 acaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctaatctgggggagagatt 28220272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 160 - 430
Target Start/End: Complemental strand, 6669 - 6398
Alignment:
Q  160 attgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaag 259  Q
    ||||||||| |||||||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  6669 attgttgtgaatccccgagtctccaagaccggatcgaaccacaccaatacaaagaataatgatatgtggagcgacggagagtggtaaccaccaaacaaag 6570  T
Q  260 tgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagat-aaacaaggagagg 358  Q
    | |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  6569 tttattgtgcaagcaagaaacaacaatacaccacctagatccaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagataaaacaaggagagg 6470  T
Q  359 gaagaagaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6469 gaagaagaaaacaataacacaaagagattggtcacccagttcggtccaaacttaacctactctggaggagag 6398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 161 - 433
Target Start/End: Original strand, 2379 - 2650
Alignment:
Q  161 ttgttgtgtatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 260  Q
    |||||||| |||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2379 ttgttgtgaatccccgagcctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagt 2478  T
Q  261 gtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagaggga 360  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||    
T  2479 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagaggga 2576  T
Q  361 agaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||| | |||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2577 agaagaaaacaataaacacaaaaagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 2650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 160 - 430
Target Start/End: Complemental strand, 15290919 - 15290649
Alignment:
Q  160 attgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    ||||||||| ||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15290919 attgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaa 15290820  T
Q  259 gtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagg 358  Q
    |  ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  15290819 gcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagg 15290722  T
Q  359 gaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||| | |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15290721 gaagaagaaaacaataaacacaaagagattggacacccagttcggtccaaacttgacctactctggaggagag 15290649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 160 - 430
Target Start/End: Complemental strand, 15471288 - 15471018
Alignment:
Q  160 attgttgtgtatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaa 258  Q
    ||||||||| ||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15471288 attgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaa 15471189  T
Q  259 gtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagg 358  Q
    |  ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  15471188 gcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagg 15471091  T
Q  359 gaagaagaaaacaa-atacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    |||||||||||||| | |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15471090 gaagaagaaaacaataaacacaaagagattggacacccagttcggtccaaacttgacctactctggaggagag 15471018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 189 - 430
Target Start/End: Original strand, 42575128 - 42575367
Alignment:
Q  189 cggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaac 288  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||    
T  42575128 cggatcgaaccacaccaatacaaactataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaac 42575227  T
Q  289 accacctagatctaatctaggaaccaagtgtgaaacacaaagcaa-caatcacaagataaacaaggagagggaagaagaaaacaa-atacaccaagagat 386  Q
    |||||||||||| |||||||||| ||||||||||  ||||||||| ||| ||||||||  ||||||||||||||||||||||||| | |||| |||||||    
T  42575228 accacctagatccaatctaggaaacaagtgtgaa--acaaagcaaccaaacacaagat--acaaggagagggaagaagaaaacaataaacacaaagagat 42575323  T
Q  387 tggtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  42575324 tggtcacccagttcggtccaaacttgacctactctggaggagag 42575367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 191 - 433
Target Start/End: Complemental strand, 3439861 - 3439625
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacac 290  Q
    ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||||| ||||||||||   |||||||||| || |||||||||||    
T  3439861 gatcgaaccacaccaatactaaaaa-aatgatgtgtggagcgacggagagcggtaaccaccaaacaaagtgt---gtgcaagcaacaatcaacaaaacac 3439766  T
Q  291 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaa-gagattgg 389  Q
    ||||||||||||||||||||| |||||| ||||| |||| || |||||||||||||||  |||||||||||||||||||||||  |||||| |||||||     
T  3439765 cacctagatctaatctaggaaacaagtgagaaactcaaaaca-caatcacaagataaa--aggagagggaagaagaaaacaaaagcaccaaagagattgt 3439669  T
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||| ||||||||||||||||||||||||||||||||||||||||    
T  3439668 tcatccagttcggtccaaacttgacctactctggaggagagatt 3439625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 191 - 430
Target Start/End: Complemental strand, 25690313 - 25690079
Alignment:
Q  191 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacac 290  Q
    ||||||||||||||||||||||||||   |||||||||||| | ||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||    
T  25690313 gatcgaaccacaccaatacaaagaat---gatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaagaatcaacaaaacac 25690218  T
Q  291 cacctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaa-atacacc-aagagattg 388  Q
    ||||||||||||||||||||| |||||| |||||||||| | ||| |||||||||||  |||| |||||||||||||||||| | ||||| |||||||||    
T  25690217 cacctagatctaatctaggaaacaagtgagaaacacaaaac-acactcacaagataa--aaggggagggaagaagaaaacaacaaacaccaaagagattg 25690121  T
Q  389 gtcacccagttcggtccaaacttgacctactctggaggagag 430  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  25690120 ttcacccagttcggtccaaacttgacctactctggaggagag 25690079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 196 - 433
Target Start/End: Complemental strand, 2628087 - 2627858
Alignment:
Q  196 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaa-caacaa-aacaccac 293  Q
    ||||||||||||||||||  ||| |||||||||||| | ||| ||| ||||||||  |||||||||    |||||||||| ||| |||||| |||| |||    
T  2628087 aaccacaccaatacaaag--taa-gatgtgtggagcaaaggaaagtagtaaccact-aacaaagtgg---gtgcaagcaaaaaatcaacaataacaacac 2627995  T
Q  294 ctagatctaatctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagagattggtcac 393  Q
    |||||||||||||||||| ||||||  || || ||| || ||| |||||||||||  ||||||||||||| ||||||||| |||||||||||||  ||||    
T  2627994 ctagatctaatctaggaaacaagtgaaaagcataaaaca-caagcacaagataaa--aggagagggaagaggaaaacaaagacaccaagagattattcac 2627898  T
Q  394 ccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2627897 ccagttcggtccaaacttgacctactctggaggagagatt 2627858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 433
Target Start/End: Complemental strand, 42498459 - 42498316
Alignment:
Q  286 aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagag 384  Q
    |||| ||||||||||||||||||||| ||| |||  ||||||||| | |||| || ||||||||  |||||||  |||| | ||||||| ||||||| ||    
T  42498459 aacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaa--aggagag--aagagggaaacaaacacaccaa-ag 42498365  T
Q  385 attggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42498364 attgttcacccagttcggtccaaacttgacctactctggaggagagatt 42498316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 433
Target Start/End: Complemental strand, 31218541 - 31218379
Alignment:
Q  267 tgcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaa 364  Q
    ||||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||| ||  || |||||||||||  |||||||  ||||     
T  31218541 tgcaagcaataatcaacaataacagcacctagatctaatctaggaaacaaagtgaaaagcacaaaacat-aagcacaagataaa--aggagag--aagag 31218447  T
Q  365 gaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
      ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31218446 agaaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 31218379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 17982840 - 17982775
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17982840 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 17982775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 34254312 - 34254377
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  34254312 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctagaggagagatt 34254377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 34256488 - 34256553
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  34256488 aaacaaacacaccaa-agattgttcacccagttcggtccaaacttgacctactctagaggagagatt 34256553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 1746200 - 1746265
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  1746200 aaacaaacacaccaac-gattgttcacccagttcggtccaaacttgacctactatggaggagagatt 1746265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 19945340 - 19945405
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  19945340 aaacaaacacaccaa-agattgttcacccagttcggttcaaacttgacctactctcgaggagagatt 19945405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 44304042 - 44303977
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  44304042 aaacaaacacaccaa-agattgttcacctagttcgatccaaacttgacctactctggaggagagatt 44303977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 42434995 - 42435037
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  42434995 tcacccagttcggtccaa-cttgacctactctggaggagagatt 42435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 22210236 - 22210314
Alignment:
Q  44 tatgaggatgaaaacacccg-ttttattttttaatgactaaaatcaaatttcgttatatttttaaggacgaaaaactta 121  Q
    ||||||||||||||||  |  |||||||| |||| || |||||||||| |||||||||||| |||||| ||||||||||    
T  22210236 tatgaggatgaaaacattctattttatttgttaaggaataaaatcaaaattcgttatatttataaggatgaaaaactta 22210314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 368 - 433
Target Start/End: Complemental strand, 43036608 - 43036545
Alignment:
Q  368 aacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||| |||||| | |||||||||||||||| ||||||||| |||||||||||||||    
T  43036608 aacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctaatctggaggagagatt 43036545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 18655564 - 18655522
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||| ||||||||||| |||||||||||||    
T  18655564 tcacccagttcggtccaa-cttgacctactttggaggagagatt 18655522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 3303652 - 3303716
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| | |||||||||||||||| ||||||||||| ||| |||||||||    
T  3303652 aaacaaacacaccaa-agattgtttacccagttcggtccaa-cttgacctactgtgggggagagatt 3303716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 4743196 - 4743260
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||| ||||||| |||||| | |||||||||||||||| ||||||||||| ||| |||||||||    
T  4743196 aaacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctactttgggggagagatt 4743260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 10930188 - 10930245
Alignment:
Q  375 acaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||| |||| | |||||||||||||| ||||||||||| ||||| |||||||||    
T  10930188 acaccaagaaattgttgacccagttcggtcc-aacttgacctaatctgggggagagatt 10930245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 432
Target Start/End: Complemental strand, 11384149 - 11384108
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagat 432  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  11384149 tcacccagttcggtccaa-cttaacctactctggaggagagat 11384108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 117
Target Start/End: Original strand, 33657607 - 33657645
Alignment:
Q  79 actaaaatcaaatttcgttatatttttaaggacgaaaaa 117  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  33657607 actaaaatcaaaattcgctatatttttaaggacgaaaaa 33657645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 433
Target Start/End: Complemental strand, 15212971 - 15212908
Alignment:
Q  368 aacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||||||||    
T  15212971 aacaaacacaccaa-agattgttgacccagttcggtccaa-cttgacctaatctgggggagagatt 15212908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 32902096 - 32902133
Alignment:
Q  292 acctagatctaatctaggaaccaagtgtgaaacacaaa 329  Q
    |||||||||||||||||||||||||||  |||||||||    
T  32902096 acctagatctaatctaggaaccaagtgaaaaacacaaa 32902133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 36684238 - 36684295
Alignment:
Q  46 tgaggatgaaaacacccgttttattttttaatgactaaaatcaaatttcgttatatttttaa 107  Q
    ||||||||||||||    |||||||||||||  |||||||| ||| ||||||||||||||||    
T  36684238 tgaggatgaaaaca----ttttattttttaagaactaaaattaaaattcgttatatttttaa 36684295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 205 - 433
Target Start/End: Original strand, 3545 - 3772
Alignment:
Q  205 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaat 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3545 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaat 3644  T
Q  305 ctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaa-atacaccaagagattggtcacccagttcggt 403  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||    
T  3645 ctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggt 3742  T
Q  404 ccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||||||||||||||||||    
T  3743 ccaaacttgacctactctggaggagagatt 3772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 177; Significance: 3e-95; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 205 - 419
Target Start/End: Complemental strand, 214 - 1
Alignment:
Q  205 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaat 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  214 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaat 115  T
Q  305 ctaggaaccaagtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaa-atacaccaagagattggtcacccagttcggt 403  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||    
T  114 ctaggaaacaagtgtgaaacacaaagcaacaatcacaagat--acaaggagagggaagaagaaaacaataaacacaaagagattggtcacccagttcggt 17  T
Q  404 ccaaacttgacctact 419  Q
    ||||||||||||||||    
T  16 ccaaacttgacctact 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 266 - 433
Target Start/End: Original strand, 11042 - 11207
Alignment:
Q  266 gtgcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaaga 363  Q
    |||||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  ||||||||| || ||| |||||||||||  |||||||||||||    
T  11042 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaaacacaaacca-caagcacaagataaa--aggagagggaaga 11138  T
Q  364 agaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
     ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11139 ggaaaacaaagacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 11207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 266 - 433
Target Start/End: Original strand, 8616 - 8781
Alignment:
Q  266 gtgcaagcaagaaacaacaa-aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaaga 363  Q
    |||||||||| || |||||| |||| ||||||||||||||||||||| ||| |||  || |||||| || ||| |||||||||||  || ||||||||||    
T  8616 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaacca-caagcacaagataaa--agaagagggaaga 8712  T
Q  364 agaaaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
     ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8713 ggaaaacaaagacaccaa-agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 8781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 11745 - 11679
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11745 aaacaaatacaccaagagattgttcacccagttcggtccaaacttgacctactctggaggagagatt 11679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 433
Target Start/End: Complemental strand, 434798 - 434655
Alignment:
Q  286 aacaccacctagatctaatctaggaaccaa-gtgtgaaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaagag 384  Q
    |||| ||||||||||||||||||||| ||| |||  || |||||| || ||| |||||||||||  ||| ||| |||||   ||||||| ||||||| |     
T  434798 aacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaca-caagcacaagataaa--agg-gagagaagagagaaacaaacacaccaa-at 434704  T
Q  385 attggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  434703 attgttcacccagttcggtccaaacttgacctactctggaggagagatt 434655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 1087 - 1037
Alignment:
Q  383 agattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1087 agattgttcacccagttcggtccaaacttgacctactctggaggagagatt 1037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 18007 - 18050
Alignment:
Q  390 tcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||| |||||||||||||||| ||||||||||||||    
T  18007 tcacccagttcgatccaaacttgacctaccctggaggagagatt 18050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 114774 - 114724
Alignment:
Q  383 agattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||| ||| ||||||||||| |||||| |||||||||||||||||||||    
T  114774 agattgttcatccagttcggtctaaacttaacctactctggaggagagatt 114724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 149079 - 149143
Alignment:
Q  367 aaacaaatacaccaagagattggtcacccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    ||||||||||||||| |||||| | |||||||||||||||| ||| ||||||||||| |||||||||    
T  149079 aaacaaatacaccaa-agattgttgacccagttcggtccaa-cttaacctactctgggggagagatt 149143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 392 - 433
Target Start/End: Complemental strand, 10651 - 10611
Alignment:
Q  392 acccagttcggtccaaacttgacctactctggaggagagatt 433  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  10651 acccagttcggtccaa-cttgacctactctggaggagagatt 10611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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