View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1789_high_9 (Length: 359)

Name: NF1789_high_9
Description: NF1789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1789_high_9
NF1789_high_9
[»] chr5 (47 HSPs)
chr5 (116-217)||(12349665-12349765)
chr5 (20-99)||(31752138-31752216)
chr5 (20-99)||(7944310-7944388)
chr5 (20-99)||(25912124-25912202)
chr5 (20-99)||(33696075-33696153)
chr5 (214-293)||(12349518-12349598)
chr5 (23-99)||(17421716-17421791)
chr5 (20-99)||(3038909-3038987)
chr5 (20-99)||(4083760-4083838)
chr5 (20-99)||(12910104-12910182)
chr5 (20-99)||(14369789-14369867)
chr5 (20-99)||(31240326-31240404)
chr5 (20-98)||(28747785-28747862)
chr5 (20-97)||(17232998-17233074)
chr5 (20-99)||(4737954-4738032)
chr5 (20-99)||(8410700-8410778)
chr5 (20-99)||(22701826-22701903)
chr5 (20-99)||(39548922-39549000)
chr5 (20-99)||(6436445-6436523)
chr5 (20-99)||(17233354-17233432)
chr5 (20-99)||(39038541-39038619)
chr5 (20-98)||(6261073-6261150)
chr5 (22-98)||(9124725-9124801)
chr5 (20-69)||(15809026-15809075)
chr5 (20-69)||(30687997-30688046)
chr5 (20-65)||(37249361-37249406)
chr5 (20-99)||(2528789-2528868)
chr5 (20-99)||(2695178-2695255)
chr5 (20-99)||(10951077-10951155)
chr5 (19-66)||(17209957-17210004)
chr5 (20-99)||(22800723-22800801)
chr5 (19-69)||(33026283-33026333)
chr5 (20-69)||(3960720-3960769)
chr5 (20-69)||(17605096-17605145)
chr5 (20-69)||(29302187-29302236)
chr5 (20-91)||(13711114-13711185)
chr5 (20-99)||(33832738-33832817)
chr5 (212-264)||(41871877-41871929)
chr5 (137-187)||(950616-950666)
chr5 (20-66)||(4736850-4736896)
chr5 (20-98)||(10471017-10471094)
chr5 (20-66)||(40234170-40234216)
chr5 (20-61)||(38661242-38661283)
chr5 (310-346)||(12349494-12349530)
chr5 (20-64)||(26905956-26906000)
chr5 (20-88)||(31752485-31752552)
chr5 (20-68)||(33282312-33282360)
[»] chr8 (45 HSPs)
chr8 (20-99)||(13269270-13269348)
chr8 (20-99)||(27545842-27545920)
chr8 (20-98)||(10616373-10616450)
chr8 (20-97)||(36899821-36899897)
chr8 (20-96)||(32069104-32069179)
chr8 (20-99)||(13468337-13468415)
chr8 (20-99)||(30633101-30633179)
chr8 (20-99)||(35550628-35550706)
chr8 (22-99)||(26042977-26043053)
chr8 (20-99)||(8258358-8258436)
chr8 (20-99)||(29125746-29125824)
chr8 (20-99)||(30207249-30207327)
chr8 (20-99)||(32486963-32487041)
chr8 (20-98)||(9483957-9484034)
chr8 (20-97)||(1281922-1281998)
chr8 (20-97)||(39934439-39934515)
chr8 (20-99)||(3369794-3369871)
chr8 (20-68)||(14826358-14826406)
chr8 (20-99)||(1201751-1201829)
chr8 (20-99)||(2823638-2823716)
chr8 (20-99)||(5946823-5946900)
chr8 (20-95)||(23544832-23544906)
chr8 (20-99)||(25123460-25123538)
chr8 (20-99)||(10777058-10777133)
chr8 (20-98)||(34103082-34103159)
chr8 (20-69)||(1783084-1783133)
chr8 (20-69)||(9483731-9483780)
chr8 (20-69)||(21442416-21442465)
chr8 (129-216)||(22575765-22575853)
chr8 (20-99)||(13290578-13290656)
chr8 (26-69)||(19971497-19971540)
chr8 (26-69)||(21021273-21021316)
chr8 (20-99)||(25127953-25128031)
chr8 (20-99)||(26867959-26868037)
chr8 (20-98)||(45299625-45299702)
chr8 (20-69)||(31071635-31071684)
chr8 (166-207)||(35237063-35237104)
chr8 (34-99)||(42556758-42556822)
chr8 (161-217)||(39972235-39972291)
chr8 (20-99)||(9413890-9413968)
chr8 (48-99)||(23161355-23161405)
chr8 (168-217)||(5074808-5074857)
chr8 (20-69)||(21352298-21352347)
chr8 (20-96)||(35067083-35067159)
chr8 (131-176)||(43351933-43351978)
[»] chr7 (48 HSPs)
chr7 (20-99)||(18352396-18352474)
chr7 (20-99)||(25818522-25818600)
chr7 (20-99)||(41407380-41407458)
chr7 (20-99)||(938933-939011)
chr7 (20-99)||(2936678-2936756)
chr7 (20-99)||(11766159-11766237)
chr7 (20-99)||(28912120-28912198)
chr7 (22-99)||(2509403-2509478)
chr7 (22-99)||(38367938-38368014)
chr7 (20-99)||(9401736-9401814)
chr7 (20-99)||(41037396-41037474)
chr7 (20-99)||(454142-454220)
chr7 (20-99)||(2633973-2634048)
chr7 (20-98)||(19069435-19069512)
chr7 (20-98)||(38796904-38796981)
chr7 (20-69)||(14770143-14770192)
chr7 (20-69)||(15220594-15220643)
chr7 (20-69)||(20516988-20517037)
chr7 (20-69)||(24720329-24720378)
chr7 (20-65)||(32577615-32577660)
chr7 (20-69)||(38876248-38876297)
chr7 (20-69)||(45225328-45225377)
chr7 (20-99)||(6736590-6736669)
chr7 (20-68)||(12080768-12080816)
chr7 (20-99)||(23740076-23740155)
chr7 (20-99)||(2362790-2362865)
chr7 (26-68)||(7437885-7437927)
chr7 (22-99)||(15957295-15957372)
chr7 (20-69)||(4655113-4655162)
chr7 (22-99)||(6559395-6559471)
chr7 (20-69)||(14719074-14719123)
chr7 (20-69)||(14777995-14778044)
chr7 (20-69)||(15230133-15230182)
chr7 (20-69)||(27168306-27168355)
chr7 (46-99)||(27168359-27168411)
chr7 (20-69)||(27812010-27812059)
chr7 (20-69)||(32852925-32852974)
chr7 (213-266)||(37848327-37848380)
chr7 (28-69)||(45225461-45225502)
chr7 (20-69)||(48193221-48193270)
chr7 (20-69)||(48454625-48454674)
chr7 (20-68)||(34986594-34986642)
chr7 (26-69)||(22479274-22479317)
chr7 (35-69)||(8048064-8048098)
chr7 (20-69)||(11327664-11327713)
chr7 (20-69)||(18123162-18123211)
chr7 (36-69)||(28605510-28605543)
chr7 (47-99)||(3512711-3512762)
[»] chr6 (29 HSPs)
chr6 (20-99)||(33730555-33730633)
chr6 (133-217)||(26539054-26539138)
chr6 (20-99)||(4898527-4898605)
chr6 (20-99)||(14488332-14488410)
chr6 (20-99)||(11100090-11100169)
chr6 (20-98)||(4898208-4898286)
chr6 (20-99)||(30525435-30525513)
chr6 (20-99)||(25061688-25061766)
chr6 (20-98)||(11742357-11742434)
chr6 (20-69)||(29646282-29646331)
chr6 (20-69)||(31132959-31133008)
chr6 (20-68)||(9955878-9955926)
chr6 (20-96)||(18102725-18102800)
chr6 (20-99)||(15718242-15718320)
chr6 (22-99)||(3438076-3438152)
chr6 (20-69)||(4184342-4184391)
chr6 (20-69)||(8171942-8171991)
chr6 (46-98)||(4838310-4838361)
chr6 (20-68)||(27828394-27828442)
chr6 (26-69)||(1369987-1370030)
chr6 (26-69)||(16599158-16599201)
chr6 (166-217)||(31490773-31490824)
chr6 (20-98)||(18154579-18154656)
chr6 (34-67)||(5187866-5187899)
chr6 (20-65)||(9406649-9406694)
chr6 (20-69)||(11100463-11100512)
chr6 (22-99)||(21969977-21970053)
chr6 (28-69)||(26667956-26667997)
chr6 (28-68)||(15962828-15962868)
[»] chr4 (54 HSPs)
chr4 (20-99)||(38425746-38425824)
chr4 (20-99)||(6137593-6137671)
chr4 (20-99)||(6946684-6946762)
chr4 (20-99)||(11777590-11777668)
chr4 (20-99)||(40496237-40496315)
chr4 (20-98)||(20458927-20459004)
chr4 (20-99)||(14863012-14863089)
chr4 (20-99)||(4712696-4712774)
chr4 (20-99)||(6193050-6193128)
chr4 (20-99)||(9744226-9744304)
chr4 (20-99)||(16553464-16553542)
chr4 (20-99)||(26335780-26335858)
chr4 (20-99)||(46106713-46106791)
chr4 (20-98)||(15725219-15725296)
chr4 (20-96)||(23384017-23384092)
chr4 (20-99)||(26958595-26958673)
chr4 (20-99)||(36955396-36955474)
chr4 (20-99)||(45875798-45875876)
chr4 (20-99)||(52437520-52437598)
chr4 (22-99)||(29102024-29102100)
chr4 (20-99)||(33811084-33811162)
chr4 (20-99)||(49425854-49425932)
chr4 (20-69)||(3818831-3818880)
chr4 (20-69)||(10216333-10216382)
chr4 (20-69)||(13211902-13211951)
chr4 (20-69)||(17181037-17181086)
chr4 (42-99)||(43639016-43639072)
chr4 (20-69)||(48560085-48560134)
chr4 (20-69)||(49970682-49970731)
chr4 (22-99)||(54742487-54742563)
chr4 (20-68)||(578841-578889)
chr4 (20-68)||(14202952-14203000)
chr4 (20-68)||(30258208-30258256)
chr4 (20-99)||(4490704-4490782)
chr4 (26-69)||(21519818-21519861)
chr4 (28-99)||(49606058-49606128)
chr4 (20-69)||(5046722-5046771)
chr4 (20-69)||(5157085-5157134)
chr4 (28-69)||(12584376-12584417)
chr4 (138-187)||(34360967-34361016)
chr4 (20-64)||(142692-142736)
chr4 (20-68)||(13621396-13621444)
chr4 (20-68)||(41172498-41172546)
chr4 (20-68)||(43639068-43639116)
chr4 (20-91)||(33105959-33106029)
chr4 (20-99)||(52306807-52306885)
chr4 (167-217)||(39418201-39418251)
chr4 (20-69)||(51784050-51784100)
chr4 (46-99)||(6137537-6137589)
chr4 (20-69)||(6214070-6214119)
chr4 (20-69)||(13371298-13371347)
chr4 (20-69)||(13381499-13381548)
chr4 (20-69)||(42807993-42808042)
chr4 (20-64)||(30820570-30820614)
[»] chr2 (38 HSPs)
chr2 (20-99)||(34082646-34082724)
chr2 (127-217)||(29260211-29260300)
chr2 (20-97)||(33739626-33739702)
chr2 (20-99)||(11675231-11675310)
chr2 (20-99)||(1750226-1750304)
chr2 (20-99)||(23664828-23664906)
chr2 (20-98)||(16075081-16075158)
chr2 (140-217)||(5671478-5671555)
chr2 (20-99)||(8386778-8386857)
chr2 (20-99)||(768581-768659)
chr2 (20-99)||(1576732-1576810)
chr2 (20-99)||(13002059-13002137)
chr2 (20-99)||(37169635-37169713)
chr2 (20-69)||(39906363-39906412)
chr2 (20-69)||(44542913-44542962)
chr2 (35-99)||(18370326-18370389)
chr2 (20-68)||(20939803-20939851)
chr2 (20-68)||(39904719-39904767)
chr2 (20-99)||(42850095-42850173)
chr2 (20-66)||(16513140-16513186)
chr2 (23-69)||(17265353-17265399)
chr2 (20-69)||(2586445-2586494)
chr2 (20-69)||(9690251-9690300)
chr2 (20-69)||(33173563-33173612)
chr2 (20-68)||(22302071-22302119)
chr2 (138-214)||(41890197-41890273)
chr2 (26-69)||(22711132-22711175)
chr2 (29-68)||(44257523-44257562)
chr2 (32-98)||(29403983-29404048)
chr2 (20-99)||(29512112-29512192)
chr2 (36-69)||(4293313-4293346)
chr2 (20-65)||(6332369-6332414)
chr2 (20-69)||(7682098-7682146)
chr2 (20-69)||(9689469-9689518)
chr2 (214-290)||(31911140-31911219)
chr2 (35-99)||(41527932-41527996)
chr2 (29-69)||(324990-325030)
chr2 (214-266)||(1729539-1729591)
[»] scaffold0418 (1 HSPs)
scaffold0418 (20-99)||(5720-5798)
[»] scaffold0015 (1 HSPs)
scaffold0015 (20-99)||(9814-9892)
[»] chr3 (47 HSPs)
chr3 (28-99)||(3800223-3800294)
chr3 (20-99)||(31039644-31039722)
chr3 (20-99)||(50801601-50801679)
chr3 (20-99)||(50874201-50874279)
chr3 (20-99)||(1376085-1376163)
chr3 (20-99)||(27317666-27317744)
chr3 (20-99)||(32203180-32203258)
chr3 (20-99)||(53467438-53467516)
chr3 (20-93)||(17605506-17605578)
chr3 (20-99)||(8814805-8814883)
chr3 (20-99)||(12127568-12127646)
chr3 (20-99)||(13349162-13349240)
chr3 (20-99)||(53581586-53581664)
chr3 (20-97)||(27360025-27360100)
chr3 (214-288)||(51877320-51877396)
chr3 (20-95)||(33837897-33837971)
chr3 (36-99)||(48765316-48765378)
chr3 (20-99)||(50913087-50913165)
chr3 (20-69)||(6748733-6748782)
chr3 (20-69)||(7848589-7848638)
chr3 (22-98)||(3269398-3269473)
chr3 (20-68)||(6109248-6109296)
chr3 (26-69)||(994811-994854)
chr3 (20-66)||(22894633-22894679)
chr3 (20-69)||(6114843-6114892)
chr3 (20-69)||(11460212-11460261)
chr3 (20-69)||(21727707-21727756)
chr3 (20-69)||(26158316-26158365)
chr3 (20-68)||(7521421-7521469)
chr3 (20-64)||(51952269-51952313)
chr3 (26-69)||(4043690-4043733)
chr3 (34-69)||(17226272-17226307)
chr3 (20-98)||(26103704-26103779)
chr3 (162-217)||(50420655-50420710)
chr3 (142-217)||(50673032-50673107)
chr3 (129-187)||(50173456-50173514)
chr3 (20-69)||(37504603-37504652)
chr3 (20-69)||(38798040-38798089)
chr3 (20-69)||(47461756-47461805)
chr3 (20-64)||(995111-995155)
chr3 (20-68)||(2868247-2868295)
chr3 (20-64)||(3544356-3544400)
chr3 (214-265)||(4298392-4298444)
chr3 (214-266)||(29213362-29213414)
chr3 (20-99)||(29239679-29239758)
chr3 (23-99)||(36823982-36824057)
chr3 (20-68)||(45059616-45059664)
[»] chr1 (61 HSPs)
chr1 (20-99)||(463393-463471)
chr1 (20-99)||(16005601-16005679)
chr1 (20-99)||(26843078-26843156)
chr1 (20-96)||(28454745-28454820)
chr1 (20-99)||(6192506-6192584)
chr1 (20-99)||(8643033-8643111)
chr1 (20-99)||(13264568-13264646)
chr1 (20-99)||(34515211-34515289)
chr1 (20-99)||(36389539-36389617)
chr1 (20-99)||(5491682-5491760)
chr1 (20-99)||(27787881-27787959)
chr1 (20-99)||(32156020-32156098)
chr1 (23-98)||(51431884-51431958)
chr1 (20-99)||(34306520-34306602)
chr1 (26-99)||(13157646-13157718)
chr1 (35-99)||(32994266-32994329)
chr1 (20-99)||(158495-158573)
chr1 (20-99)||(3979458-3979536)
chr1 (20-99)||(16073520-16073598)
chr1 (20-99)||(24770710-24770788)
chr1 (20-99)||(50559330-50559408)
chr1 (20-98)||(3273370-3273447)
chr1 (20-98)||(4158188-4158265)
chr1 (20-69)||(14387480-14387529)
chr1 (20-69)||(32151946-32151995)
chr1 (26-69)||(27389543-27389586)
chr1 (20-99)||(42199890-42199968)
chr1 (20-99)||(42208758-42208836)
chr1 (20-99)||(45818818-45818896)
chr1 (20-69)||(1805044-1805093)
chr1 (141-217)||(12381150-12381224)
chr1 (141-217)||(12385217-12385291)
chr1 (20-69)||(20411277-20411326)
chr1 (20-69)||(39424348-39424397)
chr1 (22-99)||(41146287-41146363)
chr1 (20-69)||(43236242-43236291)
chr1 (34-99)||(47130803-47130867)
chr1 (20-68)||(13157363-13157411)
chr1 (161-217)||(27935102-27935158)
chr1 (161-217)||(34429744-34429800)
chr1 (20-64)||(47130976-47131020)
chr1 (164-215)||(40289067-40289118)
chr1 (20-98)||(14387335-14387411)
chr1 (20-66)||(32144131-32144177)
chr1 (20-65)||(12864352-12864397)
chr1 (20-69)||(13385790-13385839)
chr1 (20-69)||(14494449-14494498)
chr1 (20-69)||(16960362-16960411)
chr1 (20-65)||(27255732-27255777)
chr1 (20-69)||(32144072-32144121)
chr1 (20-69)||(32716462-32716511)
chr1 (129-214)||(44359755-44359840)
chr1 (20-65)||(50797743-50797788)
chr1 (20-69)||(52772326-52772375)
chr1 (29-69)||(13943351-13943391)
chr1 (20-64)||(23413706-23413750)
chr1 (214-266)||(27935021-27935073)
chr1 (20-64)||(32152005-32152049)
chr1 (202-266)||(32268052-32268116)
chr1 (165-217)||(36596554-36596606)
chr1 (20-68)||(36817730-36817778)
[»] scaffold0627 (1 HSPs)
scaffold0627 (20-99)||(4097-4174)
[»] scaffold0217 (1 HSPs)
scaffold0217 (20-99)||(20701-20779)
[»] scaffold0325 (1 HSPs)
scaffold0325 (20-99)||(6576-6654)
[»] scaffold0068 (1 HSPs)
scaffold0068 (20-69)||(57961-58010)
[»] scaffold1808 (1 HSPs)
scaffold1808 (20-99)||(601-679)
[»] scaffold0119 (2 HSPs)
scaffold0119 (28-69)||(2796-2837)
scaffold0119 (28-69)||(14851-14892)
[»] scaffold0002 (1 HSPs)
scaffold0002 (20-69)||(452448-452497)
[»] scaffold0074 (1 HSPs)
scaffold0074 (20-68)||(26134-26182)


Alignment Details
Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 12349765 - 12349665
Alignment:
Q  116 catatctttaccctttattttaagggttatactaactagtgccctaagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatt 215  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  12349765 catatctttaccctttattttaagggttatacttacg-gtgccctcagggcactagttaaggaaataaaaaatggtaagtttgcaatgaattcaacaatt 12349667  T
Q  216 tt 217  Q
    ||    
T  12349666 tt 12349665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 31752216 - 31752138
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  31752216 agcaactcctataggcatttgctagaatacacccatttattttttagaag-gtgtgttttagcaagttataactaaaaag 31752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 7944388 - 7944310
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||| | || |||||||||||||||||||||||||    
T  7944388 agcaactcctataggcatttgctaggatacacccacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 7944310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 25912124 - 25912202
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  25912124 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 25912202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 33696153 - 33696075
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||  ||||||||| |||||||||||||||    
T  33696153 agcaactcctataggcatttgctagaatacacccacttattttttagaag-ttatgttttagcatgttataactaaaaag 33696075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 12349598 - 12349518
Alignment:
Q  214 ttttcaccatttttaaataaaatatttttaaatttgtccttttaaccaatg-cctaaaggctctttagcatttcccttatt 293  Q
    ||||||||||||| | ||| || ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  12349598 ttttcaccattttcatatacaacatttttaaatttgtcctcttaaccaatgccctaagggctctttagcatttcccttatt 12349518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 17421791 - 17421716
Alignment:
Q  23 aactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  17421791 aactcctatagacatttgctagaatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 17421716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 3038987 - 3038909
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||| ||| ||||||||| ||||||||||||| | || |||||||||||||||||||||||||    
T  3038987 agcaactcctataggcatttgttaggatacacccacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 3038909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 4083838 - 4083760
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||| ||||||||||||||||||    
T  4083838 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttaacaagttataactaaaaag 4083760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 12910104 - 12910182
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| | |  ||||||||| |||||||||||||||    
T  12910104 agcaactcctataggcatttgctagaatacacccacttattttttagaa-tgtatgttttagcatgttataactaaaaag 12910182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 14369867 - 14369789
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||| |||  || |||||||||||||||||||||||||    
T  14369867 agcaactcctataggcatttgctaggatacacccacttattttttaaaag-gtgtgttttagcaagttataactaaaaag 14369789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 31240326 - 31240404
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  31240326 agcaactcttataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 31240404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 28747862 - 28747785
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    |||||||||||||  |||||||||||||||||||| ||| ||||||||| | || ||||||||||||||||||||||||    
T  28747862 agcaactcctatagacatttgctagaatacacccacttaatttttagaa-tgtgtgttttagcaagttataactaaaaa 28747785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 17232998 - 17233074
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaa 97  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||| ||||||||||||    
T  17232998 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaaattataactaaaa 17233074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 4738032 - 4737954
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||  ||||||||||| ||||||||| ||||||||||||| | || |||||||||||||||||||||||||    
T  4738032 agcaactcatatgggcatttgctaggatacacccacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 4737954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 8410700 - 8410778
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||| |||||||||| ||||| | | ||||||||||||| | || |||||||||||||||||||||||||    
T  8410700 agcaactcctataaacatttgctaggatacatcaacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 8410778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 22701826 - 22701903
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||||||||||||||||||||||||| ||||||||  |||| | | |||||||||||||||||||||||||    
T  22701826 agcaactcttataagcatttgctagaatacacccacttatttttg-gaaggt-gtgttttagcaagttataactaaaaag 22701903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 39548922 - 39549000
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||| |||||  |||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  39548922 agcaacttctatagccatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 39549000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 6436523 - 6436445
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| || |||| | ||||||||||||||  || |||||||||||||| ||||||||||    
T  6436523 agcaactcctataggcatttgctaggattcacctacttattttttagaag-gtgtgttttagcaagttacaactaaaaag 6436445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 17233354 - 17233432
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||| |||| || |||||||||||||| ||| |||||| ||| |||||| |||||||    
T  17233354 agcaactcctataggcatttgctagaacacactcacttattttttagaag-ttgtgttttaccaaattataattaaaaag 17233432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 39038619 - 39038541
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||| ||||| ||||||||||||||  || |||||| ||| ||||||||||||||    
T  39038619 agcaactcctatatgcatttgctaggatatacccacttattttttagaag-gtgtgttttaacaaattataactaaaaag 39038541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 6261073 - 6261150
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    |||||||||||||  |||||||||| ||| ||||| ||||||||||||||  || ||||||||||||||||| ||||||    
T  6261073 agcaactcctatagacatttgctaggatatacccacttattttttagaag-gtgtgttttagcaagttataattaaaaa 6261150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 9124801 - 9124725
Alignment:
Q  22 caactcctataagcatttgctagaatacacccattta-ttttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||| ||||| ||||||||||||||||| ||| ||| |||||||||| | || ||||||||||||||||||||||||    
T  9124801 caacttctataggcatttgctagaatacatccacttatttttttagaa-tgtgtgttttagcaagttataactaaaaa 9124725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 15809075 - 15809026
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  15809075 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 15809026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 30687997 - 30688046
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  30687997 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 30688046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 37249406 - 37249361
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttta 65  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  37249406 agcaaatcctataggcatttgctagaatacacccatttatttttta 37249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 2528868 - 2528789
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccattta-ttttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  |||||||||||||||| ||| ||| |||||||||||  || ||||||||||||||||||| |||||    
T  2528868 agcaactcctatagacatttgctagaatacatccacttatttttttagaag-gtgtgttttagcaagttataactgaaaag 2528789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 2695178 - 2695255
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||| ||||| |||  ||||||||| | | |||||||||||||||||||||||||    
T  2695178 agcaactcctataggcatttgctaggata-acccacttacattttagaaggt-gtgttttagcaagttataactaaaaag 2695255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 10951155 - 10951077
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||| || |||||||| | |||||||||| |||  || |||||||||||||||| ||||||||    
T  10951155 agcaactcctataggcatttgatataatacacctacttattttttataag-gtgtgttttagcaagttatatctaaaaag 10951077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 17209957 - 17210004
Alignment:
Q  19 aagcaactcctataagcatttgctagaatacacccatttattttttag 66  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||||    
T  17209957 aagcaaatcctataggcatttgctagaatacacccacttattttttag 17210004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 22800723 - 22800801
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||| |  |||||||||||||||||||| |||||||||| |||  || |||||| ||| ||||||||||||||    
T  22800723 agcaactcctacagacatttgctagaatacacccacttattttttaaaag-gtgtgttttaacaaattataactaaaaag 22800801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 33026333 - 33026283
Alignment:
Q  19 aagcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    |||||| ||||||| ||||||||||||||||||| | ||||||||||||||    
T  33026333 aagcaaatcctataggcatttgctagaatacaccgacttattttttagaag 33026283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 3960720 - 3960769
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||| | ||||||||||||||||||||| ||||||||||||||    
T  3960720 agcaaatcctacatgcatttgctagaatacacccacttattttttagaag 3960769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 17605145 - 17605096
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||| ||||||||||| ||||||||||||||    
T  17605145 agcaaatcctataggcatttgctggaatacacccacttattttttagaag 17605096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 29302187 - 29302236
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||  ||||||||||||||    
T  29302187 agcaaatcctataggcatttgctagaatacacccgcttattttttagaag 29302236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 13711114 - 13711185
Alignment:
Q  20 agcaactcctataagcatttgctagaatacaccca-tttattttttagaagtttgggttttagcaagttataa 91  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||| ||| |  | |||||||||||||||||    
T  13711114 agcaactcctataggcatttgctagaatacacccactttttttttttgaa-tgagtgttttagcaagttataa 13711185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 33832817 - 33832738
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatt-ttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||| |||||  |||||| ||||| |||| |||| | | |||||||||||||||||||||||||    
T  33832817 agcaactcctataggcatttgttagaacgcacccacttattgttttggaaggt-gtgttttagcaagttataactaaaaag 33832738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 41871929 - 41871877
Alignment:
Q  212 aattttcaccatttttaaataaaatatttttaaatttgtccttttaaccaatg 264  Q
    |||||||||||||||| |||| || |||||||||||||| || ||||||||||    
T  41871929 aattttcaccattttttaatacaacatttttaaatttgtgctcttaaccaatg 41871877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 950616 - 950666
Alignment:
Q  137 aagggttatactaactagtgccctaagggcactagttaaggaaacaaaaaa 187  Q
    ||||||||| ||||| |||||||| |||||||||||||||||  |||||||    
T  950616 aagggttatgctaacaagtgcccttagggcactagttaaggattcaaaaaa 950666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 4736896 - 4736850
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttag 66  Q
    ||||| ||||||| ||||||||||||||||| ||| |||||||||||    
T  4736896 agcaaatcctataggcatttgctagaatacatccacttattttttag 4736850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 10471094 - 10471017
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||| | || ||||||||| |||||||||| |||| |||||||| || | ||||||||| || |||||||||||    
T  10471094 agcaactcccacaaacatttgctaaaatacacccacttatgttttagaa-ttagtgttttagcatgtcataactaaaaa 10471017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 40234170 - 40234216
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttag 66  Q
    ||||||||||||| ||||||||||| ||||||||| |||| ||||||    
T  40234170 agcaactcctataggcatttgctaggatacacccacttatgttttag 40234216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 38661283 - 38661242
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattt 61  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||    
T  38661283 agcaaatcctataggcatttgctagaatacacccacttattt 38661242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 12349530 - 12349494
Alignment:
Q  310 catttcccttattcataacttgactaggttcgtattc 346  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  12349530 catttcccttatttatagcttgactaggttcgtattc 12349494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 26906000 - 26905956
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt 64  Q
    ||||| ||||||| ||||||||||||||||| ||| |||||||||    
T  26906000 agcaaatcctataggcatttgctagaatacagccacttatttttt 26905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 31752552 - 31752485
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagtta 88  Q
    |||||||| |||||||||||| || |||| |||||||||||| ||  || |||| ||||||||||||||    
T  31752552 agcaactcttataagcatttgttataatatacccatttatttctttcaa-tttgtgttttagcaagtta 31752485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 33282360 - 33282312
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||| ||| |||||||||||||| |||||| |||||||||||||    
T  33282360 agcaaatccaataggcatttgctagaatgcacccacttattttttagaa 33282312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 13269348 - 13269270
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  13269348 agcaactcctataaacatttgctagaatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 13269270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 27545842 - 27545920
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  27545842 agcaactcctataagcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 27545920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 10616373 - 10616450
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || ||||||||||||||||||||||||    
T  10616373 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaa 10616450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 36899821 - 36899897
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaa 97  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||    
T  36899821 agcaactcctatacgcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaa 36899897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 32069104 - 32069179
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaa 96  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || ||||||||||||||||||||||    
T  32069104 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaa 32069179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 13468415 - 13468337
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||||||  || | |||||||||||||||||||||||    
T  13468415 agcaactcctataggcatttgctataatacacccacttattttttagaag-gtgtgctttagcaagttataactaaaaag 13468337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 30633179 - 30633101
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||| ||| | ||||||||||||||||||||||||| ||||||||||  || |||||||||||||||||||||||||    
T  30633179 agcaacttctacatgcatttgctagaatacacccatttaatttttagaag-gtgtgttttagcaagttataactaaaaag 30633101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 35550706 - 35550628
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| |||||| || ||||||||||||| | || |||||||||||||||||||||||||    
T  35550706 agcaactcctataggcatttgctaggatacactcacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 35550628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 26043053 - 26042977
Alignment:
Q  22 caactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||| ||||||||||| ||||||||| |||||||||| |||  || |||||||||||||||||||||||||    
T  26043053 caactcctataggcatttgctaggatacacccacttattttttaaaag-gtgtgttttagcaagttataactaaaaag 26042977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 8258436 - 8258358
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||   | |||||||||| ||||||| ||||||    
T  8258436 agcaactcctataggcatttgctagaatacacccacttattttttagaag-aagtgttttagcaaattataaccaaaaag 8258358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 29125824 - 29125746
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| |||||||||  |||||||| ||||  || |||||||||||||||||||||||||    
T  29125824 agcaactcctataggcatttgctaggatacacccacctattttttggaag-gtgtgttttagcaagttataactaaaaag 29125746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 30207249 - 30207327
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||| |||  || |||||||||| |||||| |||||||    
T  30207249 agcaactcctataggcatttgctagaatacacccacttatttttta-aagagtgtgttttagcaaattataattaaaaag 30207327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 32487041 - 32486963
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||   ||  ||||||||||||||||||||||||    
T  32487041 agcaactcctataggcatttgctaggatacacccacttattttttagaa-agtgtattttagcaagttataactaaaaag 32486963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 9484034 - 9483957
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||||||||||||||| ||  ||| ||||| ||||||||||||||  || ||||||||||||||||||||||||    
T  9484034 agcaactcctataagcatttgttaagatatacccacttattttttagaag-atgtgttttagcaagttataactaaaaa 9483957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 1281998 - 1281922
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaa 97  Q
    ||||||| ||||| ||||||| ||||||||| ||| ||||||||||||||  || |||||||||||||||||||||||    
T  1281998 agcaacttctataggcatttggtagaatacatccacttattttttagaag-gtgtgttttagcaagttataactaaaa 1281922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 39934515 - 39934439
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaa 97  Q
    ||||||||||| | ||||||||||||||||||| | ||||||||||||||  || |||||| ||||||||||||||||    
T  39934515 agcaactcctacaggcatttgctagaatacaccaacttattttttagaag-gtgtgttttaacaagttataactaaaa 39934439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 3369794 - 3369871
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||| | | |  || |||||||||||||||||||||||||    
T  3369794 agcaactcctataggcatttgctaggatacacccacttatttttaaaagg--tgtgttttagcaagttataactaaaaag 3369871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 14826406 - 14826358
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  14826406 agcaaatcctataagcatttgctagaatacacccacttattttttagaa 14826358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 1201751 - 1201829
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| |||| |||||||||  || |||||| ||| ||||||||||||||    
T  1201751 agcaactcctataggcatttgctaggatacacccacttatattttagaag-gtgtgttttaacaaattataactaaaaag 1201829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 2823716 - 2823638
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  |||||||||| ||||| ||| |||||||||||||   || |||||||||||||||||||||||||    
T  2823716 agcaactcctatagacatttgctaggatacatccacttattttttagaa-agtgtgttttagcaagttataactaaaaag 2823638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 5946900 - 5946823
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||  ||||||||||| ||||||| | |||||||||||||| | | |||||||||||||||||||||||||    
T  5946900 agcaactcctatcggcatttgctaggatacacc-acttattttttagaagat-gtgttttagcaagttataactaaaaag 5946823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 23544906 - 23544832
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaa 95  Q
    |||||||||||||  |||||| ||||||||||||| ||||||||||||||  || ||||||| |||||||||||||    
T  23544906 agcaactcctatagacatttgttagaatacacccacttattttttagaag-gtgtgttttagtaagttataactaa 23544832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 25123460 - 25123538
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||| ||||||  |||||||||||||||||||| |||||||||| |||  || |||||| ||||||||||||||||||    
T  25123460 agcaacgcctatagacatttgctagaatacacccacttattttttaaaag-gtgtgttttaacaagttataactaaaaag 25123538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 10777058 - 10777133
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||||     || |||||||||||||||||||||||||    
T  10777058 agcaactcctataagcatttgctaagatacatccacttattttttag----gtgtgttttagcaagttataactaaaaag 10777133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 34103082 - 34103159
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||| ||||| || |||||||  ||||| ||||||||||||||||||  || ||||||||||||||||||||||||    
T  34103082 agcaacttctataggcttttgctatgatacatccatttattttttagaag-gtgtgttttagcaagttataactaaaaa 34103159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 1783084 - 1783133
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  1783084 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 1783133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 9483731 - 9483780
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  9483731 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 9483780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 21442465 - 21442416
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  21442465 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 21442416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 22575853 - 22575765
Alignment:
Q  129 tttattttaagggttatactaactagtgccctaagggcactagttaaggaaacaaaaaat-gataagtttgcaatgaattcaacaattt 216  Q
    |||| ||| |||||||| ||||| |||||||| |||||||| ||||||||||| | |||| |  ||||||||| |||||||||||||||    
T  22575853 tttaattttagggttatgctaaccagtgcccttagggcacttgttaaggaaactagaaatagtaaagtttgcattgaattcaacaattt 22575765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 13290578 - 13290656
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| || | ||||||| ||||||||| ||| ||| |||||||||| | | |||||||||||||||||||||||||    
T  13290578 agcaactcttacatgcatttgttagaatacatccacttaatttttagaaggt-gtgttttagcaagttataactaaaaag 13290656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 19971540 - 19971497
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  19971540 tcctataggcatttgctagaatacacccacttattttttagaag 19971497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 21021273 - 21021316
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  21021273 tcctataggcatttgctagaatacacccacttattttttagaag 21021316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 25127953 - 25128031
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||| |  ||||||||||||||| | || ||| |||||||||| | | |||||||||||||||||||||||||    
T  25127953 agcaactcctacagacatttgctagaatactctcacttaatttttagaaggt-gtgttttagcaagttataactaaaaag 25128031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 26868037 - 26867959
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| |||||| ||| || ||||||| ||||||| ||||||  || |||||||||||||||| ||||||||    
T  26868037 agcaactcctataggcatttactataacacacccacttattttctagaag-gtgtgttttagcaagttatatctaaaaag 26867959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 45299702 - 45299625
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    |||||||| |||| ||||||||||| ||||||||| ||||||||| ||||  || |||||||||| |||||| ||||||    
T  45299702 agcaactcttataggcatttgctaggatacacccacttatttttttgaag-gtgtgttttagcaaattataattaaaaa 45299625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 31071635 - 31071684
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||| | ||||||||||||||    
T  31071635 agcaaatcctataggcatttgctagaatacaccaacttattttttagaag 31071684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 35237104 - 35237063
Alignment:
Q  166 cactagttaaggaaacaaaaaatgataagtttgcaatgaatt 207  Q
    ||||||||||| ||||||||||||||||||||||| ||||||    
T  35237104 cactagttaagaaaacaaaaaatgataagtttgcattgaatt 35237063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 42556758 - 42556822
Alignment:
Q  34 gcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||| |||||| || ||||||||| ||| | || |||||||||||||||||||||||||    
T  42556758 gcatttgctaggatacactcacttatttttttgaa-tgtgtgttttagcaagttataactaaaaag 42556822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 39972291 - 39972235
Alignment:
Q  161 aagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    ||||||||||||||||||||| ||||||  || ||||||| |||||| |||||||||    
T  39972291 aagggcactagttaaggaaaccaaaaatagtatgtttgcattgaattgaacaatttt 39972235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 9413890 - 9413968
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  |||||||||||||||| | | |||||||||| |||  |  ||||||||||||||||| |||||||    
T  9413890 agcaactcctatagacatttgctagaatacatctacttattttttaaaag-gtatgttttagcaagttataattaaaaag 9413968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 23161405 - 23161355
Alignment:
Q  48 acacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||| ||||||||||||| | || |||||||||||||||||||||||||    
T  23161405 acacccacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 23161355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 5074808 - 5074857
Alignment:
Q  168 ctagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    |||||||| ||||| ||||||  |||||||||| ||||||||||||||||    
T  5074808 ctagttaaagaaactaaaaatagtaagtttgcactgaattcaacaatttt 5074857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 21352347 - 21352298
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||| || ||||||| ||||| |||||||||| ||||||||||||||    
T  21352347 agcaacttctgtaagcatatgctataatacacccacttattttttagaag 21352298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 35067083 - 35067159
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccattta-ttttttagaagtttgggttttagcaagttataactaaa 96  Q
    |||||||||| || | |||||||||||||| |||| ||| |||||||||||  || | ||||||||||||||||||||    
T  35067083 agcaactcctttaggtatttgctagaatacgcccacttatttttttagaag-gtgtgctttagcaagttataactaaa 35067159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 43351933 - 43351978
Alignment:
Q  131 tattttaagggttatactaactagtgccctaagggcactagttaag 176  Q
    |||||||||||| || |||||| ||||||||||||||| |||||||    
T  43351933 tattttaagggtcatgctaacttgtgccctaagggcacaagttaag 43351978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 18352396 - 18352474
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||||||||    
T  18352396 agcaactcctataggcatttgctagaatacacccacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 18352474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 25818600 - 25818522
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  25818600 agcaactcctataggcatttgctagaatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 25818522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 41407458 - 41407380
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||   || |||||||||||||||||||||||||    
T  41407458 agcaactcctataggcatttgctagaatacacccacttattttttagaa-agtgtgttttagcaagttataactaaaaag 41407380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 939011 - 938933
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||| |||  || |||||||||||||||||||||||||    
T  939011 agcaactcctataggcatttgctaggatacacccacttattttttaaaag-gtgtgttttagcaagttataactaaaaag 938933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 2936756 - 2936678
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||  ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  2936756 agcaactcctattggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 2936678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 11766237 - 11766159
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  11766237 agcaactcttatatgcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 11766159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 28912198 - 28912120
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||  ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  28912198 agcaactcctatgggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 28912120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 2509403 - 2509478
Alignment:
Q  22 caactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||||  || |||||||||||||||||||||||||    
T  2509403 caactcctatatgcatttgctagaatacacccactta-tttttagaag-gtgtgttttagcaagttataactaaaaag 2509478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 38367938 - 38368014
Alignment:
Q  22 caactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||| |||  || |||||||||||||||||||||||||    
T  38367938 caactcctataggcatttgctagaatacagccacttattttttaaaag-gtgtgttttagcaagttataactaaaaag 38368014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 9401736 - 9401814
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||| |  || ||||||||| ||||||| |||||||    
T  9401736 agcaactcctataggcatttgctagaatacacccacttattttttagatg-gtgtgttttagcatgttataattaaaaag 9401814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 41037474 - 41037396
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| |||||||||| |||||||||| |||| ||| |||| | || |||||||||||||||||||||||||    
T  41037474 agcaactcctataggcatttgctaaaatacacccagttatatttaagaa-tgtgtgttttagcaagttataactaaaaag 41037396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 454220 - 454142
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||| ||| ||||||||| ||||||||||||||  ||  |||||||||||| |||||||||||    
T  454220 agcaactcctataggcatttgttaggatacacccacttattttttagaag-gtgtattttagcaagttttaactaaaaag 454142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 2633973 - 2634048
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||||     || |||||||||||||||||| ||||||    
T  2633973 agcaactcctataggcatttgctagaatacacctacttattttttag----gtgtgttttagcaagttataaccaaaaag 2634048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 19069512 - 19069435
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    |||||||||||||   ||||||||| ||||||||| ||||||||||||| | || ||||||||||||||||| ||||||    
T  19069512 agcaactcctatagctatttgctaggatacacccacttattttttagaa-tgtgtgttttagcaagttataattaaaaa 19069435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 38796904 - 38796981
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    |||||||||||||  |||||||||||||||||||  |||||||||| |||  || |||||| |||||||||||||||||    
T  38796904 agcaactcctatagacatttgctagaatacacccgcttattttttaaaag-gtgtgttttaacaagttataactaaaaa 38796981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 14770192 - 14770143
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  14770192 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 14770143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 15220643 - 15220594
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  15220643 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 15220594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 20517037 - 20516988
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  20517037 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 20516988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 24720378 - 24720329
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  24720378 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 24720329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 32577660 - 32577615
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttta 65  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  32577660 agcaaatcctataagcatttgctagaatacacccacttatttttta 32577615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 38876248 - 38876297
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  38876248 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 38876297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 45225377 - 45225328
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  45225377 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 45225328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 6736590 - 6736669
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccattta-ttttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||| | ||| |||||||||||  || |||||| ||| ||||||||||||||    
T  6736590 agcaactcctataggcatttgctagaatacacctacttatttttttagaag-gtgtgttttaacaaattataactaaaaag 6736669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 12080816 - 12080768
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  12080816 agcaaatcctataggcatttgctagaatacacccacttattttttagaa 12080768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 23740155 - 23740076
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccattta-ttttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||| ||||||||||| | ||| |||||||||||  || |||||| ||||||||||||||||||    
T  23740155 agcaactcctataggcatttgttagaatacacctacttatttttttagaag-gtgtgttttaacaagttataactaaaaag 23740076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 2362865 - 2362790
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  |||||||||| ||||||||| |||||||||||     || ||||||||||||||| |||||||||    
T  2362865 agcaactcctatagacatttgctaggatacacccacttattttttag----gtgtgttttagcaagttatcactaaaaag 2362790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 7437885 - 7437927
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  7437885 tcctataggcatttgctagaatacacccaattattttttagaa 7437927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 15957295 - 15957372
Alignment:
Q  22 caactcctataagcatttgctagaatacacccatttatttttt-agaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||  |||||||||| ||||||| | ||||||||| ||||| | | |||||||||||||||||||||||||    
T  15957295 caactcctatagacatttgctaggatacaccaacttatttttttagaaggt-gtgttttagcaagttataactaaaaag 15957372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 4655162 - 4655113
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||||||||||||||||| |||||||||| ||| ||||||||||    
T  4655162 agcaaatcctataagcatttgctaaaatacacccacttagtttttagaag 4655113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 6559471 - 6559395
Alignment:
Q  22 caactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||| |||| |||||||||| |||||||||  ||||||| ||||| | |  |||||||||||||||||||||||||    
T  6559471 caactcatataggcatttgctataatacacccgcttattttatagaa-tgtatgttttagcaagttataactaaaaag 6559395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 14719074 - 14719123
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||| ||||||||||| ||||||||||||||    
T  14719074 agcaaatcctataggcatttgctggaatacacccacttattttttagaag 14719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 14778044 - 14777995
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||||||  |||||||||||||||||||| ||||||||||||||    
T  14778044 agcaaatcctatagacatttgctagaatacacccacttattttttagaag 14777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 15230182 - 15230133
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||||||  |||||||||||||||||||| ||||||||||||||    
T  15230182 agcaaatcctatagacatttgctagaatacacccacttattttttagaag 15230133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 27168355 - 27168306
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||||||||| ||||||| ||| ||||||||| ||||||||||||||    
T  27168355 agcaactcctataggcatttggtaggatacacccacttattttttagaag 27168306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 27168359 - 27168411
Alignment:
Q  46 atacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||| |||||||||||||| | | |||||||||||||||||||||||||    
T  27168359 atacacccacttattttttagaaggt-gtgttttagcaagttataactaaaaag 27168411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 27812059 - 27812010
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||| || ||||||||||||||||||||| ||||||||||||||    
T  27812059 agcaaatcctgtaggcatttgctagaatacacccacttattttttagaag 27812010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 32852974 - 32852925
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||||||  |||||||||||||||||||| ||||||||||||||    
T  32852974 agcaaatcctatagacatttgctagaatacacccacttattttttagaag 32852925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 37848380 - 37848327
Alignment:
Q  213 attttcaccatttttaaataaaatatttttaaatttgtccttttaaccaatgcc 266  Q
    ||||||||||||||  |||| ||||||||||| |||||||| ||||||||||||    
T  37848380 attttcaccattttccaatacaatatttttaagtttgtcctcttaaccaatgcc 37848327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 45225502 - 45225461
Alignment:
Q  28 ctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||||||||||||||||| ||||||||||||||    
T  45225502 ctataggcatttgctagaatacacccacttattttttagaag 45225461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 48193270 - 48193221
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||| ||||||||||||| ||||||||||||||    
T  48193270 agcaaatcctataggcatttgttagaatacacccacttattttttagaag 48193221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 48454625 - 48454674
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||||||  |||||||||||||||||||| ||||||||||||||    
T  48454625 agcaaatcctatagacatttgctagaatacacccacttattttttagaag 48454674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 34986642 - 34986594
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| || |||| ||||||||||||||||||||| |||||||||||||    
T  34986642 agcaaatcttataggcatttgctagaatacacccacttattttttagaa 34986594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 22479317 - 22479274
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    |||||||  |||||||||||||||||||| ||||||||||||||    
T  22479317 tcctatatacatttgctagaatacacccacttattttttagaag 22479274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 69
Target Start/End: Original strand, 8048064 - 8048098
Alignment:
Q  35 catttgctagaatacacccatttattttttagaag 69  Q
    |||||||||||||||||||| ||||||||||||||    
T  8048064 catttgctagaatacacccacttattttttagaag 8048098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 11327713 - 11327664
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  11327713 agcaaatcctataggcatttgctaggatacacccacttagtttttagaag 11327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 18123162 - 18123211
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  18123162 agcaaatcctataggcatttgctaggatacacccacttagtttttagaag 18123211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 28605543 - 28605510
Alignment:
Q  36 atttgctagaatacacccatttattttttagaag 69  Q
    ||||||||||||||||||| ||||||||||||||    
T  28605543 atttgctagaatacacccacttattttttagaag 28605510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 3512711 - 3512762
Alignment:
Q  47 tacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||||||||||||| | | ||||||| |||||||||||||||||    
T  3512711 tacacccacttattttttagaagat-gtgttttagtaagttataactaaaaag 3512762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 33730633 - 33730555
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  33730633 agcaactcctataggcatttgctagaatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 33730555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 26539054 - 26539138
Alignment:
Q  133 ttttaagggttatactaactagtgccctaagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    |||| ||||||||  ||||||||| |||||||||||||||||||||||| ||||||  |||||||||| ||||||||||||||||    
T  26539054 tttttagggttatgttaactagtgtcctaagggcactagttaaggaaactaaaaatagtaagtttgcattgaattcaacaatttt 26539138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 4898527 - 4898605
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||| | || |||||||||||||||||||||||||    
T  4898527 agcaactcctataggcatttgctaggatacacccacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 4898605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 14488410 - 14488332
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||| ||||||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  14488410 agcaactcatataggcatttgctagaatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 14488332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 11100169 - 11100090
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccattta-ttttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| |||||||||||||| |||||| ||| |||||||||| | || |||||||||||||||||||||||||    
T  11100169 agcaactcctatatgcatttgctagaatgcacccacttatttttttagaa-tgtgtgttttagcaagttataactaaaaag 11100090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 4898208 - 4898286
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||||||| |||||||||||||||||| || ||||||||||  |   || ||||||||||||||||||||||||    
T  4898208 agcaactcctataggcatttgctagaatacactcacttattttttattaaggtgtgttttagcaagttataactaaaaa 4898286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 30525435 - 30525513
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttag-aagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| |||||||||||||||||| || ||||||||||| |||| |  |||||||||| ||||||||||||||    
T  30525435 agcaactcctataggcatttgctagaatacactcacttattttttagaaagtat--gttttagcaaattataactaaaaag 30525513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 25061766 - 25061688
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||| | |||||| |||||||  || |||||| ||||||||||||||||||    
T  25061766 agcaactcctataggcatttgctaggatacaccaacttatttgttagaag-gtgtgttttaacaagttataactaaaaag 25061688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 11742434 - 11742357
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||  |||  || ||||||||| ||||||||||||||    
T  11742434 agcaactcctataggcatttgctaggatacacccatttaattttttaaag-gtgtgttttagcaggttataactaaaaa 11742357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 29646331 - 29646282
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  29646331 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 29646282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 31132959 - 31133008
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  31132959 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 31133008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 9955878 - 9955926
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  9955878 agcaaatcctataggcatttgctagaatacacccacttattttttagaa 9955926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 18102800 - 18102725
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaa 96  Q
    ||||||| ||||| ||||||||||  ||||||||| ||||||||||||| | ||  |||||||||||||||||||||    
T  18102800 agcaacttctataggcatttgctatgatacacccacttattttttagaa-tgtgtattttagcaagttataactaaa 18102725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 15718320 - 15718242
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||| ||||||||| ||| |||| |||||||||  || |||||| ||| ||||||||||||||    
T  15718320 agcaactcctataggcatttgttagaatacatccacttatattttagaag-gtgtgttttaacaaattataactaaaaag 15718242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 3438076 - 3438152
Alignment:
Q  22 caactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||| |||| |||||||| || ||| ||||| ||||||||||||| | || ||||||||||||||||| |||||||    
T  3438076 caactcttataggcatttgcaaggatatacccacttattttttagaa-tgtgtgttttagcaagttataattaaaaag 3438152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 4184342 - 4184391
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||| | ||||||||||||||    
T  4184342 agcaaatcctataggcatttgctagaatacaccaacttattttttagaag 4184391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 8171991 - 8171942
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| || |||| ||||||||||||||||||||| ||||||||||||||    
T  8171991 agcaaatcttataggcatttgctagaatacacccacttattttttagaag 8171942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 4838361 - 4838310
Alignment:
Q  46 atacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||| ||||||||||||| | || ||||||||||||||||||||||||    
T  4838361 atacacccacttattttttagaa-tgtgtgttttagcaagttataactaaaaa 4838310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 27828394 - 27828442
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| ||||||| ||||||||||||| |||||||||||||    
T  27828394 agcaaatcctataggcatttgttagaatacacccacttattttttagaa 27828442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 1369987 - 1370030
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    |||||||  |||||||||||||||| ||||||||||||||||||    
T  1369987 tcctatagacatttgctagaatacatccatttattttttagaag 1370030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 16599158 - 16599201
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||    
T  16599158 tcctataggcatttactagaatacacccacttattttttagaag 16599201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 31490824 - 31490773
Alignment:
Q  166 cactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    |||||||||||||||| ||||||  |||||||| | ||||||||||||||||    
T  31490824 cactagttaaggaaactaaaaatagtaagtttgtattgaattcaacaatttt 31490773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 18154656 - 18154579
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    |||||||||||||  |||||| ||| ||||||||| ||||||| |||| |  || |||||||||||||||||| |||||    
T  18154656 agcaactcctatagacatttgttaggatacacccacttattttatagacg-gtgtgttttagcaagttataacaaaaaa 18154579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 5187866 - 5187899
Alignment:
Q  34 gcatttgctagaatacacccatttattttttaga 67  Q
    ||||||||||||||||||||| ||||||||||||    
T  5187866 gcatttgctagaatacacccacttattttttaga 5187899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 9406694 - 9406649
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttta 65  Q
    ||||| ||||||| ||||||||||||||||||||| ||||| ||||    
T  9406694 agcaattcctatatgcatttgctagaatacacccacttattgttta 9406649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 11100463 - 11100512
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  11100463 agcaaatcctataggcatttgctaggatacacccacttagtttttagaag 11100512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 21969977 - 21970053
Alignment:
Q  22 caactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||| ||||| |||||||||||||||| | | |||||||||| |||  ||  ||||| ||||||||||||||||||    
T  21969977 caactcttataaacatttgctagaatacatctacttattttttataag-gtgtattttaacaagttataactaaaaag 21970053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 26667956 - 26667997
Alignment:
Q  28 ctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||    
T  26667956 ctataggcatttgttagaatacacccacttattttttagaag 26667997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 15962828 - 15962868
Alignment:
Q  28 ctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| |||||| |||||||||||||| |||||||||||||    
T  15962828 ctataggcattttctagaatacacccacttattttttagaa 15962868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 38425746 - 38425824
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||| | || |||||||||||||||||||||||||    
T  38425746 agcaactcctataggcatttgctagaacacacccatttattttttagaa-tgtgtgttttagcaagttataactaaaaag 38425824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 6137593 - 6137671
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||  || ||||||| |||||||||||||||||    
T  6137593 agcaactcctataggcatttgctagaatacacccacttattttttagaag-gtgtgttttagtaagttataactaaaaag 6137671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 6946762 - 6946684
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  6946762 agcaactcctataggcatttgctaggatacacccacttattttttagaag-atgtgttttagcaagttataactaaaaag 6946684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 11777590 - 11777668
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||  || ||||||| |||||||||||||||||    
T  11777590 agcaactcctataagcatttgctaggatacacccacttattttttagaag-gtgtgttttagtaagttataactaaaaag 11777668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 40496237 - 40496315
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||||||||    
T  40496237 agcaactcctatagacatttgctagaatacacccacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 40496315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 20458927 - 20459004
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||||||||  || ||||||||||||||||||||||||    
T  20458927 agcaactcctataggcatttgctagaatatacccacttattttttagaag-atgtgttttagcaagttataactaaaaa 20459004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 14863089 - 14863012
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || ||||||||||||||||| |||||||    
T  14863089 agcaactcctataggcatttgctaggatacacccacttattttttagaag--tgtgttttagcaagttataattaaaaag 14863012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 4712774 - 4712696
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||| |||| |||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  4712774 agcaactcctataggcattcgctaaaatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 4712696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 6193050 - 6193128
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||| ||||||||||||||||||||||||| || ||||||||||||||  || |||||||||||||||||| ||||||    
T  6193050 agcaacacctataagcatttgctagaatacactcacttattttttagaag-gtgtgttttagcaagttataacaaaaaag 6193128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 9744226 - 9744304
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || ||||||||||||||||| |||||||    
T  9744226 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataaataaaaag 9744304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 16553542 - 16553464
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||||||   || |||||||||||||||||||||||||    
T  16553542 agcaactcctataggcatttgctagaatacatccacttattttttagaa-agtgtgttttagcaagttataactaaaaag 16553464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 26335858 - 26335780
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||| ||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  26335858 agcaactcctataggcatttgttaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 26335780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 46106791 - 46106713
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||| ||| ||||||||||| ||||||||| ||||||||||||| | || |||||||||||||||||||||||||    
T  46106791 agcaactccaataggcatttgctaggatacacccacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 46106713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 15725296 - 15725219
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || ||||||| ||||||||||||||||    
T  15725296 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagtaagttataactaaaaa 15725219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 23384017 - 23384092
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaa 96  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||| |||||||||||||||    
T  23384017 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgcgttttaacaagttataactaaa 23384092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 26958673 - 26958595
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||| || |||| ||||||||||||||||||||| ||||||||||||| | || |||||||||| ||||||||||||||    
T  26958673 agcaaatcatataggcatttgctagaatacacccacttattttttagaa-tgtgtgttttagcaaattataactaaaaag 26958595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 36955474 - 36955396
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||| |||||||||||||||||| || |||||||||| || | || |||||||||||||||||||||||||    
T  36955474 agcaactcatataggcatttgctagaatacactcacttattttttataa-tgtgtgttttagcaagttataactaaaaag 36955396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 45875876 - 45875798
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||| ||| | || |||||||||| ||||||||||||||    
T  45875876 agcaactcctataggcatttgctaggatacacccacttatttttttgaa-tgtgtgttttagcaaattataactaaaaag 45875798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 52437520 - 52437598
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  |||||| ||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  52437520 agcaactcctatagacatttgttaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 52437598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 29102100 - 29102024
Alignment:
Q  22 caactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||| |||||||||| ||||||||| |||||||||| |||  || ||||||||||||||||| |||||||    
T  29102100 caactcctataaacatttgctaggatacacccacttattttttataag-atgtgttttagcaagttataattaaaaag 29102024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 33811162 - 33811084
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||| | |||||||||| |||||||||| ||| |||||||||   || |||||||||||||||||||||||||    
T  33811162 agcaactcctacaggcatttgctataatacacccacttaatttttagaa-agtgtgttttagcaagttataactaaaaag 33811084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 49425854 - 49425932
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||| ||||| ||||||||||| ||||||| | ||||||||||||||  || |||||||||| ||||||||||||||    
T  49425854 agcaacttctataggcatttgctaggatacacctacttattttttagaag-gtgtgttttagcaacttataactaaaaag 49425932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 3818880 - 3818831
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  3818880 agcaaatcctataaacatttgctagaatacacccacttattttttagaag 3818831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 10216333 - 10216382
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  10216333 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 10216382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 13211951 - 13211902
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  13211951 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 13211902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 17181086 - 17181037
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  17181086 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 17181037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 43639072 - 43639016
Alignment:
Q  42 tagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| |||||||||||||| | | |||||||||||||||||||||||||    
T  43639072 tagaatacacccacttattttttagaagat-gtgttttagcaagttataactaaaaag 43639016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 48560134 - 48560085
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  48560134 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 48560085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 49970731 - 49970682
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  49970731 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 49970682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 54742563 - 54742487
Alignment:
Q  22 caactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||| |||| |||||||||| |||||||||| |||| |||||||| | || |||||||||||||||||||| ||||    
T  54742563 caactcttataggcatttgctaaaatacacccacttatattttagaa-tgtgtgttttagcaagttataactagaaag 54742487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 578841 - 578889
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  578841 agcaaatcctataggcatttgctagaatacacccacttattttttagaa 578889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 14202952 - 14203000
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  14202952 agcaaatcctataggcatttgctagaatacacccacttattttttagaa 14203000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 30258208 - 30258256
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  30258208 agcaaatcctataggcatttgctagaatacacccacttattttttagaa 30258256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 4490782 - 4490704
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  ||||||||| |||||||||| ||||||  || || | || |||||||||||||||||||||||||    
T  4490782 agcaactcctatagacatttgctataatacacccacttatttccta-aaatatgtgttttagcaagttataactaaaaag 4490704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 21519861 - 21519818
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  21519861 tcctataggcatttgctagaatacacccacttattttttagaag 21519818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 49606128 - 49606058
Alignment:
Q  28 ctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||  || ||||||||||||||||  |||||||    
T  49606128 ctatatgcatttgctaggatacacccacttattttttagaag-gtgcgttttagcaagttatagataaaaag 49606058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 5046722 - 5046771
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||||||  |||||||||||||||||||| ||||||||||||||    
T  5046722 agcaaatcctatagacatttgctagaatacacccacttattttttagaag 5046771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 5157134 - 5157085
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| || |||||||||||||||||| ||||||||||||||    
T  5157134 agcaaatcctataggcctttgctagaatacacccacttattttttagaag 5157085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 12584376 - 12584417
Alignment:
Q  28 ctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||||||||||||||||| ||||||||||||||    
T  12584376 ctataggcatttgctagaatacacccacttattttttagaag 12584417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 34361016 - 34360967
Alignment:
Q  138 agggttatactaactagtgccctaagggcactagttaaggaaacaaaaaa 187  Q
    |||||||| |||||||||||||| |||||| | |||||||||||||||||    
T  34361016 agggttatgctaactagtgccctcagggcaatggttaaggaaacaaaaaa 34360967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 142736 - 142692
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt 64  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  142736 agcaactcctataggcatttgctaggatacacccacttatttttt 142692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 13621396 - 13621444
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| ||||||||||| ||||||||| |||||||||||||    
T  13621396 agcaaatcctataggcatttgctaggatacacccacttattttttagaa 13621444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 41172546 - 41172498
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| || |||| ||||||||||||||||||||| |||||||||||||    
T  41172546 agcaaatcttataggcatttgctagaatacacccacttattttttagaa 41172498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 43639116 - 43639068
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    |||||||||||||  |||||| ||||||||||||| |||||||||||||    
T  43639116 agcaactcctatagacatttgttagaatacacccacttattttttagaa 43639068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 33106029 - 33105959
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataa 91  Q
    |||||||||||||  |||||||||| |||| |||| |||||||||| |||  || |||||||||||||||||    
T  33106029 agcaactcctatagacatttgctaggatacgcccacttattttttaaaag-gtgtgttttagcaagttataa 33105959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 52306885 - 52306807
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  |||||||||| ||||||| | ||||||||||||||  || ||| || ||| ||||||||||||||    
T  52306885 agcaactcctatagacatttgctaggatacacctacttattttttagaag-gtgtgttataacaacttataactaaaaag 52306807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 39418251 - 39418201
Alignment:
Q  167 actagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    ||||| ||||||||||||||||| |||||||| | | ||||||||||||||    
T  39418251 actagataaggaaacaaaaaatggtaagtttgtattaaattcaacaatttt 39418201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 51784050 - 51784100
Alignment:
Q  20 agcaactcctataagcatttgctagaatacaccc-atttattttttagaag 69  Q
    ||||| ||||||| |||||||||||||||||||| | ||||||||||||||    
T  51784050 agcaaatcctataggcatttgctagaatacaccctacttattttttagaag 51784100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 6137589 - 6137537
Alignment:
Q  46 atacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||| |||||||||||||| | | ||||||||||| |||||||||||||    
T  6137589 atacacccacttattttttagaaggt-gtgttttagcaaggtataactaaaaag 6137537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 6214119 - 6214070
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  6214119 agcaaatcctataggcatttgctaggatacacccacttagtttttagaag 6214070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 13371347 - 13371298
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||| ||| |||| |||||||||    
T  13371347 agcaaatcctataggcatttgctagaatacaaccacttatgttttagaag 13371298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 13381548 - 13381499
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||| ||| |||| |||||||||    
T  13381548 agcaaatcctataggcatttgctagaatacaaccacttatgttttagaag 13381499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 42807993 - 42808042
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  42807993 agcaaatcctataggcatttgctaggatacacccacttagtttttagaag 42808042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 30820570 - 30820614
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt 64  Q
    ||||| ||||||| ||||||||||||| ||||||| |||||||||    
T  30820570 agcaaatcctataggcatttgctagaagacacccacttatttttt 30820614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 34082646 - 34082724
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  34082646 agcaactcctataggcatttgctaggatacacccatttattttttagaag-gtgtgttttagcaagttataactaaaaag 34082724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 29260300 - 29260211
Alignment:
Q  127 cctttattttaagggttatactaactagtgccctaagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    |||||||||| |||||||| ||||| |||||||| |||  || |||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  29260300 cctttatttttagggttatgctaaccagtgcccttaggt-acaagttaaggaaaccaaaaatgataagttcgcattgaattcaacaatttt 29260211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 33739626 - 33739702
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaa 97  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||||||  || ||||||||||||||||| |||||    
T  33739626 agcaactcctataggcatttgctagaatacatccacttattttttagaag-gtgtgttttagcaagttataattaaaa 33739702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 11675231 - 11675310
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccattta-ttttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||| |||||||||||  || |||||||||||||||||||||||||    
T  11675231 agcaactcctataggcatttgctaggatacacccacttatttttttagaag-gtgtgttttagcaagttataactaaaaag 11675310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 1750304 - 1750226
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||| | ||||||||||||||||||||| ||| ||||||||||  || ||||||| |||||||||||||||||    
T  1750304 agcaactcctacatgcatttgctagaatacacccacttaatttttagaag-gtgtgttttagtaagttataactaaaaag 1750226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 23664828 - 23664906
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||||||||  || |||||| ||| ||||||||||||||    
T  23664828 agcaactcctataggcatttgctagaatacacccacttatattttagaag-gtgtgttttaacaaattataactaaaaag 23664906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 16075158 - 16075081
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    |||||||||| || |||||| |||| ||||||||| ||||||||||||||  || ||||||||||||||||||||||||    
T  16075158 agcaactcctgtaggcatttactaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaa 16075081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 5671478 - 5671555
Alignment:
Q  140 ggttatactaactagtgccctaagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    |||||| ||||| | |||||||| ||||||||||||||||| |||||||| |||||||||| | ||||||| ||||||    
T  5671478 ggttatgctaaccaatgccctaatggcactagttaaggaaataaaaaatggtaagtttgcattcaattcaagaatttt 5671555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 8386778 - 8386857
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt-agaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| | ||| |  | ||||||||||||||||||||||||    
T  8386778 agcaactcctatatgcatttgctagaatacacccacttatttttttacaagatatg-ttttagcaagttataactaaaaag 8386857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 768659 - 768581
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||  ||||||| | ||||||||||||||  || |||||| ||||||||||||||||||    
T  768659 agcaactcctataggcatttgctacgatacaccaacttattttttagaag-gtgcgttttaacaagttataactaaaaag 768581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 1576732 - 1576810
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||| |||||||||| || |||||| ||||||||||||| | || ||||||| || ||||||||||||||    
T  1576732 agcaactcctataatcatttgctaggatgcacccacttattttttagaa-tgtgtgttttaggaaattataactaaaaag 1576810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 13002137 - 13002059
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| |||||||||| |||||||||  ||||||||||||||   | |||||||||||| ||||||||||||    
T  13002137 agcaactcctataggcatttgctaaaatacaccctcttattttttagaag-gagtgttttagcaagtgataactaaaaag 13002059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 37169635 - 37169713
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||| | |||| ||||||||||||||||||||  |||||||||| |||  || |||||||||||||||||||||||||    
T  37169635 agcaacccatataggcatttgctagaatacaccctcttattttttaaaag-gtgcgttttagcaagttataactaaaaag 37169713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 39906363 - 39906412
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  39906363 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 39906412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 44542962 - 44542913
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  44542962 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 44542913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 18370326 - 18370389
Alignment:
Q  35 catttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||| ||||||||| ||||||||||||||  || ||||||||||||||||| |||||||    
T  18370326 catttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataattaaaaag 18370389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 20939803 - 20939851
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  20939803 agcaaatcctataggcatttgctagaatacacccacttattttttagaa 20939851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 39904767 - 39904719
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  39904767 agcaaatcctataggcatttgctagaatacacccacttattttttagaa 39904719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 42850095 - 42850173
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||| ||||||| ||||||||||||||||| ||| |||||||||| ||   || |||||| ||||||||||||||||||    
T  42850095 agcaattcctataggcatttgctagaatacatccacttatttttta-aaaagtgtgttttaacaagttataactaaaaag 42850173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 16513186 - 16513140
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttag 66  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  16513186 agcaactcctataggcatttgctaggatacacccacttattttttag 16513140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 17265353 - 17265399
Alignment:
Q  23 aactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||    
T  17265353 aactcctatagacatttgctagaatacacccacttattttttagaag 17265399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 2586494 - 2586445
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||| | ||||||||||||||    
T  2586494 agcaaatcctataggcatttgctagaatacacctacttattttttagaag 2586445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 9690251 - 9690300
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| || |||| ||||||||||||||||||||| ||||||||||||||    
T  9690251 agcaaatcttataggcatttgctagaatacacccacttattttttagaag 9690300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 33173612 - 33173563
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||||||  |||||||||||||||||||| ||||||||||||||    
T  33173612 agcaaatcctatagacatttgctagaatacacccacttattttttagaag 33173563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 22302071 - 22302119
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| ||||||||||||||||||||| ||||| |||||||    
T  22302071 agcaaatcctataggcatttgctagaatacacccacttattgtttagaa 22302119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 41890273 - 41890197
Alignment:
Q  138 agggttatactaactagtgccctaagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaat 214  Q
    |||||||| ||||| ||||||||||||||| | ||||||||||| |||| |  || ||||||| || ||||||||||    
T  41890273 agggttatgctaacaagtgccctaagggcatttgttaaggaaaccaaaagtagtaggtttgcattggattcaacaat 41890197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 22711132 - 22711175
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||    
T  22711132 tcctataggcatttgctagaatacatccacttattttttagaag 22711175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 44257562 - 44257523
Alignment:
Q  29 tataagcatttgctagaatacacccatttattttttagaa 68  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  44257562 tataggcatttgctagaatacacccacttattttttagaa 44257523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 29404048 - 29403983
Alignment:
Q  32 aagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    |||||||||||| |||||||||| ||||||||||||| |  | |||||||||| | |||||||||||    
T  29404048 aagcatttgctaaaatacacccacttattttttagaa-tgagtgttttagcaaatgataactaaaaa 29403983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 29512192 - 29512112
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt--agaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||| |||||  ||||| |||| ||||||||| |||||||||  ||||| | | |||||||||||||||||||||||||    
T  29512192 agcaacttctatagacatttactaggatacacccacttattttttttagaaggt-gtgttttagcaagttataactaaaaag 29512112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 69
Target Start/End: Original strand, 4293313 - 4293346
Alignment:
Q  36 atttgctagaatacacccatttattttttagaag 69  Q
    ||||||||||||||||||| ||||||||||||||    
T  4293313 atttgctagaatacacccacttattttttagaag 4293346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 6332369 - 6332414
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttta 65  Q
    ||||| |||||||  |||||||||||||||||||| ||||||||||    
T  6332369 agcaaatcctatagacatttgctagaatacacccacttatttttta 6332414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 7682098 - 7682146
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| || |||||||||||    
T  7682098 agcaaatcctataggcatttgctagaatacacccactt-ttttttagaag 7682146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 9689469 - 9689518
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  9689469 agcaaatcctataggcatttgctaggatacacccacttagtttttagaag 9689518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 31911219 - 31911140
Alignment:
Q  214 ttttcaccatttttaaataaaatatttttaaatttgtccttttaaccaatgcctaaagg---ctctttagcatttccctt 290  Q
    |||||||||||||  |||| ||||||||||| |||||||| || |||||||||  ||||   ||||||| ||||||||||    
T  31911219 ttttcaccattttccaatacaatatttttaagtttgtcctcttgaccaatgccataaggtctctctttaacatttccctt 31911140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 41527996 - 41527932
Alignment:
Q  35 catttgctagaatacacccattta-ttttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||| |||||||||| ||| |||||||||| | || |||||| ||||||||||||||||||    
T  41527996 catttgctataatacacccacttacttttttagaa-tgtgtgttttaacaagttataactaaaaag 41527932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 324990 - 325030
Alignment:
Q  29 tataagcatttgctagaatacacccatttattttttagaag 69  Q
    |||| ||||||||||||||||||| | ||||||||||||||    
T  324990 tataggcatttgctagaatacaccaacttattttttagaag 325030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 1729539 - 1729591
Alignment:
Q  214 ttttcaccatttttaaataaaatatttttaaatttgtccttttaaccaatgcc 266  Q
    |||||||||||||| |||| || |||| ||| |||||||| ||||||||||||    
T  1729539 ttttcaccatttttcaatacaacatttctaagtttgtcctcttaaccaatgcc 1729591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 5798 - 5720
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||||||||    
T  5798 agcaactcctatagacatttgctagaatacacccacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 5720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 9814 - 9892
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  9814 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 9892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 3800294 - 3800223
Alignment:
Q  28 ctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||| |||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||    
T  3800294 ctataagcattttctaggatacacccacttattttttagaaggttgtgttttagcaagttataactaaaaag 3800223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 31039644 - 31039722
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  31039644 agcaactcctataggcatttgctaggatacacccacttattttttagaag-atgtgttttagcaagttataactaaaaag 31039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 50801679 - 50801601
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  50801679 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 50801601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 50874201 - 50874279
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  50874201 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 50874279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 1376085 - 1376163
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||| ||| ||||||||||||| | || |||||||||||||||||||||||||    
T  1376085 agcaactcctataggcatttgctaggatacatccacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 1376163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 27317744 - 27317666
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||| |||  || |||||||||||||||||||||||||    
T  27317744 agcaactcctataggcatttgctagaatacatccacttattttttaaaag-gtgtgttttagcaagttataactaaaaag 27317666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 32203258 - 32203180
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||| ||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||| ||||    
T  32203258 agcaactcttataggcatttgctagaatacacccacttattttttagaa-tgtgtgttttagcaagttataactagaaag 32203180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 53467438 - 53467516
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| | || ||||||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  53467438 agcaactcatgtaggcatttgctagaatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 53467516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 17605578 - 17605506
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataact 93  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||||||    
T  17605578 agcaactcctatatgcatttgctaggatacacccacttattttttagaaggtt-tgttttagcaagttataact 17605506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 8814883 - 8814805
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||| ||||  || ||||||||||||||| | |||||||    
T  8814883 agcaacttctataagcatttgctagaatacacccacttatttttttgaag-gtgtgttttagcaagttatgattaaaaag 8814805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 12127646 - 12127568
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| |||||| |||| ||||||||| ||||||||||||||  || ||||||||| |||||||||||||||    
T  12127646 agcaactcctataggcattttctaggatacacccacttattttttagaag-gtgtgttttagcatgttataactaaaaag 12127568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 13349240 - 13349162
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||| ||| ||||||||||| ||||||||| ||||||||||||||   | |||||||||||||||||||||||||    
T  13349240 agcaactccaataggcatttgctaggatacacccacttattttttagaag-gcgtgttttagcaagttataactaaaaag 13349162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 53581664 - 53581586
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  |||||||||  ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  53581664 agcaactcctatagacatttgctaagatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 53581586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 27360100 - 27360025
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaa 97  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||| |||  || |||||||||||||||||||||||    
T  27360100 agcaactcctata-gcatttgctagaatacatccacttattttttataag-gtgtgttttagcaagttataactaaaa 27360025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 51877320 - 51877396
Alignment:
Q  214 ttttcaccatttttaaataaaatatttttaaatttgtccttttaaccaatgcctaaagg--ctctttagcatttccc 288  Q
    |||||||||||| | |||| ||||||| |||||||||||||||||||||||||| ||||   |||||||||||||||    
T  51877320 ttttcaccatttctgaatacaatatttctaaatttgtccttttaaccaatgccttaaggtattctttagcatttccc 51877396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 33837897 - 33837971
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaa 95  Q
    |||||||||||||  |||||||||| |||||| || ||||||||||||||  || |||||||||||||||||||||    
T  33837897 agcaactcctatagacatttgctaggatacactcacttattttttagaag-gtgtgttttagcaagttataactaa 33837971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 48765316 - 48765378
Alignment:
Q  36 atttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||||||||||||||||||||||||  || ||||||| |||||||||||||||||    
T  48765316 atttgctaaaatacacccatttattttttagaag-gtgtgttttagtaagttataactaaaaag 48765378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 50913087 - 50913165
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||| | ||||||||||||||||||||| ||| ||||||||||  || |||||||  ||||||||||||||||    
T  50913087 agcaactcctacaggcatttgctagaatacacccacttaatttttagaag-gtgtgttttagggagttataactaaaaag 50913165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 6748733 - 6748782
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||||    
T  6748733 agcaaatcctataagcatttgctagaatacacccacttcttttttagaag 6748782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 7848638 - 7848589
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  7848638 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 7848589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 3269473 - 3269398
Alignment:
Q  22 caactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||||| ||||||||||| |||||| || ||||||||||||| | |  ||||||||| ||||||||||||||    
T  3269473 caactcctatatgcatttgctaggatacacacacttattttttagaa-tgtctgttttagcatgttataactaaaaa 3269398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 6109248 - 6109296
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||    
T  6109248 agcaaatcatataggcatttgctagaatacacccatttattttttagaa 6109296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 994811 - 994854
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  994811 tcctataggcatttgctagaatacacccacttattttttagaag 994854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 22894633 - 22894679
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttag 66  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||||    
T  22894633 agcaactcctataaacatttgctaggatacacccacttattttttag 22894679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 6114892 - 6114843
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||||||  |||||||||||||||||||| ||||||||||||||    
T  6114892 agcaaatcctatagacatttgctagaatacacccacttattttttagaag 6114843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 11460261 - 11460212
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| |||||||||||||| |||||| ||||||||||||||    
T  11460261 agcaaatcctataggcatttgctagaatgcacccacttattttttagaag 11460212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 21727756 - 21727707
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||| | ||||||||||||||||||||| ||||||||||||||    
T  21727756 agcaaatcctacaggcatttgctagaatacacccacttattttttagaag 21727707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 26158316 - 26158365
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||| | ||||||||||||||    
T  26158316 agcaaatcctataggcatttgctagaatacacctacttattttttagaag 26158365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 7521469 - 7521421
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| ||||||| ||||||||||||| |||||||||||||    
T  7521469 agcaaatcctataggcatttgttagaatacacccacttattttttagaa 7521421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 51952313 - 51952269
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt 64  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||    
T  51952313 agcaaatcctataggcatttgctagaatacacccacttatttttt 51952269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 4043733 - 4043690
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||    
T  4043733 tcctataggcatttgctagaatacaccaacttattttttagaag 4043690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 17226272 - 17226307
Alignment:
Q  34 gcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||||||||||||||||| ||||||||||||||    
T  17226272 gcatttgctagaatacacccacttattttttagaag 17226307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 26103704 - 26103779
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||||||| |||||||| || |  |||||| |||||||||||||| | |  |||||||||||||||||||||||    
T  26103704 agcaactcctatatgcatttgccagga--cacccacttattttttagaaggt-gtcttttagcaagttataactaaaaa 26103779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 50420655 - 50420710
Alignment:
Q  162 agggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    |||||||||||||| ||||  |||||||| || |||||| ||||||||||||||||    
T  50420655 agggcactagttaaagaaattaaaaatgaaaattttgcattgaattcaacaatttt 50420710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 50673032 - 50673107
Alignment:
Q  142 ttatactaactagtgccctaagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    |||||||||| ||||  || | ||||||||||||  ||||||||||||||||| ||||| |||||||  |||||||    
T  50673032 ttatactaaccagtgttcttatggcactagttaacaaaacaaaaaatgataagattgcattgaattctgcaatttt 50673107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 50173514 - 50173456
Alignment:
Q  129 tttattttaagggttatactaactagtgccctaagggcactagttaaggaaacaaaaaa 187  Q
    ||||||||| ||||||| ||||| |||||||| ||| |||||||||||||  |||||||    
T  50173514 tttattttatgggttatgctaacaagtgcccttaggacactagttaaggattcaaaaaa 50173456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 37504652 - 37504603
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||||||  |||||| ||||||||||||| ||||||||||||||    
T  37504652 agcaaatcctatagacatttgttagaatacacccacttattttttagaag 37504603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 38798089 - 38798040
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| |||||||||| |||||| ||| ||||||||||||||    
T  38798089 agcaaatcctataggcatttgctaaaatacatccacttattttttagaag 38798040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 47461805 - 47461756
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  47461805 agcaaatcctataggcatttgctaggatacacccacttagtttttagaag 47461756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 995111 - 995155
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt 64  Q
    ||||| ||||||| ||||||||||||||||| ||| |||||||||    
T  995111 agcaaatcctataggcatttgctagaatacaaccacttatttttt 995155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 2868247 - 2868295
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| || |||| ||||||||||| ||||||||| |||||||||||||    
T  2868247 agcaaatcatataggcatttgctaggatacacccacttattttttagaa 2868295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 3544400 - 3544356
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt 64  Q
    ||||| || |||| ||||||||||||||||||||| |||||||||    
T  3544400 agcaaatcttataggcatttgctagaatacacccacttatttttt 3544356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 4298392 - 4298444
Alignment:
Q  214 ttttcaccattttta-aataaaatatttttaaatttgtccttttaaccaatgc 265  Q
    ||||||||||||||  |||| || ||||||||||||||| |||||||||||||    
T  4298392 ttttcaccatttttccaatacaacatttttaaatttgtcattttaaccaatgc 4298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 29213414 - 29213362
Alignment:
Q  214 ttttcaccatttttaaataaaatatttttaaatttgtccttttaaccaatgcc 266  Q
    |||||||||||||| |||| ||  ||| |||||||||||| ||||||||||||    
T  29213414 ttttcaccatttttcaatataacgtttctaaatttgtcctattaaccaatgcc 29213362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 29239679 - 29239758
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt-agaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||| ||||||| || ||||||||||  |||||||| |||| | || |||||| ||||||||||||||||||    
T  29239679 agcaactcgtataggcatttgttaaaatacacccacatatttttttagaa-tgtgtgttttaccaagttataactaaaaag 29239758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 36824057 - 36823982
Alignment:
Q  23 aactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||| ||| |||||||||||||||||   | || ||||||||||| | | ||||||||||||||||| |||||||    
T  36824057 aactccaataggcatttgctagaatacaagaacttgttttttagaaggt-gtgttttagcaagttataattaaaaag 36823982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 45059616 - 45059664
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| |||||||  |||||||||| ||||||||| |||||||||||||    
T  45059616 agcaaatcctatagacatttgctaggatacacccacttattttttagaa 45059664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 463393 - 463471
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  463393 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 463471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 16005679 - 16005601
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  16005679 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 16005601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 26843078 - 26843156
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  26843078 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 26843156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 28454820 - 28454745
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaa 96  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  || ||||||||||||||||||||||    
T  28454820 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaa 28454745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 6192506 - 6192584
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||||||||  || |||| ||||||||||||||||||||    
T  6192506 agcaactcctatatgcatttgctagaatacacccacttatattttagaag-gtgtgtttcagcaagttataactaaaaag 6192584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 8643111 - 8643033
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||||||  || |||||||||||||||||| ||||||    
T  8643111 agcaactcctatacgcatttgctataatacacccacttattttttagaag-atgtgttttagcaagttataaccaaaaag 8643033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 13264646 - 13264568
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||| ||||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  13264646 agcaactcatataggcatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 13264568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 34515211 - 34515289
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||| |||  || |||||||||||||||||||||||||    
T  34515211 agcaactcctataggcatttgttagaatacacccacttattttttaaaag-gtgtgttttagcaagttataactaaaaag 34515289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 36389539 - 36389617
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||| |||  || |||||||||||||||||||||||||    
T  36389539 agcaactcctataggcatttgctaggatacacccacttattttttaaaag-gtgtgttttagcaagttataactaaaaag 36389617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 5491682 - 5491760
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  ||||| ||||||||||| || ||||||||||||||  || |||||||||||||||||||||||||    
T  5491682 agcaactcctatagacatttactagaatacactcacttattttttagaag-gtgtgttttagcaagttataactaaaaag 5491760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 27787881 - 27787959
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| |||| | ||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  27787881 agcaactcttataggaatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 27787959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 32156098 - 32156020
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||||| |  | ||||||||||||||||| |||||||    
T  32156098 agcaactcctgtatgcatttgctagaatacacccacttattttttagaa-tgagtgttttagcaagttataaataaaaag 32156020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 51431958 - 51431884
Alignment:
Q  23 aactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||  || |||||||||| |||||||||||||    
T  51431958 aactcctatagacatttgctagaatacacccacttattttttagaag-gtgtgttttagcaaattataactaaaaa 51431884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 34306520 - 34306602
Alignment:
Q  20 agcaactcctataagcatttgctagaata----cacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| |||||||||||||||    |||||| |||||||||||||| ||| | |||||||||||||||||||||||    
T  34306520 agcaactcctataggcatttgctagaatacactcacccacttattttttagaag-ttgtgctttagcaagttataactaaaaag 34306602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 13157646 - 13157718
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||  |||||||||| ||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  13157646 tcctatagacatttgctaggatacacccacttattttttagaag-gtgtgttttagcaagttataactaaaaag 13157718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 32994266 - 32994329
Alignment:
Q  35 catttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||||||| |||||||||||||||| | || ||||||||||||||||| |||||||    
T  32994266 catttgctagaatacactcatttattttttagaa-tatgtgttttagcaagttataattaaaaag 32994329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 158495 - 158573
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| | |||||||| ||| |||||| ||||||| ||||||  || |||||||||||||||||||||||||    
T  158495 agcaactcctataggaatttgctataattcacccacttattttctagaag-gtgtgttttagcaagttataactaaaaag 158573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 3979458 - 3979536
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||  ||||||||| |||||||||| ||||||||||||||  || | |||| ||||||||||||||||||    
T  3979458 agcaactcctatagacatttgctataatacacccacttattttttagaag-gtgtgctttaacaagttataactaaaaag 3979536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 16073520 - 16073598
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||| | ||||||| ||  ||||||||| ||||||||||||| | || |||||||||||||||||||||||||    
T  16073520 agcaactcctacaggcatttgttatgatacacccacttattttttagaa-tgtgtgttttagcaagttataactaaaaag 16073598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 24770710 - 24770788
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||| |||||| ||||||||||| ||||||||| ||||| ||| ||||  || |||||||||||||||||||||||||    
T  24770710 agcaacccctataggcatttgctaggatacacccacttattcttttgaag-gtgtgttttagcaagttataactaaaaag 24770788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 50559330 - 50559408
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||| ||| |||| |||| ||||||||| ||||  || |||||||||||||||||||||||||    
T  50559330 agcaactcctataggcatttgttaggatacgcccacttatttttttgaag-gtgtgttttagcaagttataactaaaaag 50559408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 3273447 - 3273370
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||||||| ||||||| |||||| |||||| |||||||||| |||  || ||||||| ||||||||||||||||    
T  3273447 agcaactcctataggcatttgttagaatgcacccacttattttttaaaag-gtgtgttttagtaagttataactaaaaa 3273370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 4158188 - 4158265
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||||| |||  || ||||||||| ||||||||||||||    
T  4158188 agcaactcctataagcatttgttaggaaacacccacttattttttaaaag-gtgtgttttagcaggttataactaaaaa 4158265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 14387480 - 14387529
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  14387480 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 14387529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 32151946 - 32151995
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  32151946 agcaactcctatatgcatttgctaggatacacccacttattttttagaag 32151995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 27389586 - 27389543
Alignment:
Q  26 tcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  27389586 tcctataggcatttgctagaatacacccacttattttttagaag 27389543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 42199968 - 42199890
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| || | |||||||||||||||||| || ||| ||||||||||  ||  ||||||||||||||||||||||||    
T  42199968 agcaactcttacaggcatttgctagaatacacacacttaatttttagaag-gtgtattttagcaagttataactaaaaag 42199890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 42208836 - 42208758
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| || | |||||||||||||||||| || ||| ||||||||||  ||  ||||||||||||||||||||||||    
T  42208836 agcaactcttacaggcatttgctagaatacacacacttaatttttagaag-gtgtattttagcaagttataactaaaaag 42208758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 45818896 - 45818818
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||| ||||  ||||||||| |||||||||| |||||||||||||| ||| | ||||| || ||||||||||||||    
T  45818896 agcaactcatatagacatttgctataatacacccacttattttttagaag-ttgtgctttagaaaattataactaaaaag 45818818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 1805093 - 1805044
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| |||| |||||||||    
T  1805093 agcaaatcctataggcatttgctagaatacacccacttatcttttagaag 1805044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 12381150 - 12381224
Alignment:
Q  141 gttatactaactagtgccctaagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    ||||| |||||  ||||||| ||| ||||||||||| |||||||||||| |||||||  | ||||||||||||||||    
T  12381150 gttatgctaaccggtgcccttaggacactagttaagtaaacaaaaaatggtaagttt--attgaattcaacaatttt 12381224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 12385217 - 12385291
Alignment:
Q  141 gttatactaactagtgccctaagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    ||||| |||||  ||||||| ||| ||||||||||| |||||||||||| |||||||  | ||||||||||||||||    
T  12385217 gttatgctaaccggtgcccttaggacactagttaagtaaacaaaaaatggtaagttt--attgaattcaacaatttt 12385291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 20411277 - 20411326
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| |||||||  |||||||||||||||||||| ||||||||||||||    
T  20411277 agcaaatcctatagtcatttgctagaatacacccacttattttttagaag 20411326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 39424348 - 39424397
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||| | ||||||||||||||    
T  39424348 agcaaatcctataggcatttgctagaatacaccaacttattttttagaag 39424397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 41146363 - 41146287
Alignment:
Q  22 caactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||| |||  |||||||||| ||| ||||| ||||||||| |||| | | |||||||||||||||||||||||||    
T  41146363 caactccaatagacatttgctaggatatacccacttatttttttgaaggt-gtgttttagcaagttataactaaaaag 41146287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 43236242 - 43236291
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||| ||||||||| ||||||||||||||    
T  43236242 agcaaatcctataggcatttgctaggatacacccacttattttttagaag 43236291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 47130803 - 47130867
Alignment:
Q  34 gcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||| ||||||||| |||||||||| || | || ||||||||| |||||||||||||||    
T  47130803 gcatttgctaggatacacccacttatttttta-aaatgtgcgttttagcaggttataactaaaaag 47130867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 13157363 - 13157411
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||||||||||| |||||||||| ||| |||||| |||||||||||||    
T  13157363 agcaactcctataggcatttgctataattcacccacttattttttagaa 13157411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 27935158 - 27935102
Alignment:
Q  161 aagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    |||| |||| ||||||||||||||||||  |||||||| | ||||||||||||||||    
T  27935158 aaggacactcgttaaggaaacaaaaaatagtaagtttgtattgaattcaacaatttt 27935102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 34429744 - 34429800
Alignment:
Q  161 aagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    ||||||||| ||||||||||||||||||  ||||||||   ||||||||||||||||    
T  34429744 aagggcacttgttaaggaaacaaaaaatagtaagtttgttttgaattcaacaatttt 34429800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 47131020 - 47130976
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt 64  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||    
T  47131020 agcaaatcctataggcatttgctagaatacacccacttatttttt 47130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 40289067 - 40289118
Alignment:
Q  164 ggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatt 215  Q
    ||||||||||||| ||| |||||||| |||||||||| ||||||||| ||||    
T  40289067 ggcactagttaagaaaataaaaaatggtaagtttgcattgaattcaataatt 40289118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 14387335 - 14387411
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaa 98  Q
    |||| ||||||||  ||||| |||||||||| ||||||| ||||||||||  || |||||| |||||||||||||||||    
T  14387335 agcagctcctatagccatttactagaatacatccattta-tttttagaag-gtgtgttttaacaagttataactaaaaa 14387411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 32144131 - 32144177
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttag 66  Q
    |||||||||||||  |||||||||| ||||||||| |||||||||||    
T  32144131 agcaactcctatagacatttgctaggatacacccacttattttttag 32144177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 12864397 - 12864352
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttta 65  Q
    ||||| || |||| ||||||||||||||||||||| ||||||||||    
T  12864397 agcaaatcatataggcatttgctagaatacacccacttatttttta 12864352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 13385839 - 13385790
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  13385839 agcaaatcctataggcatttgctaggatacacccacttagtttttagaag 13385790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 14494449 - 14494498
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  14494449 agcaaatcctataggcatttgctaggatacacccacttagtttttagaag 14494498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 16960362 - 16960411
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| || |||| |||||||||||||||||| || ||||||||||||||    
T  16960362 agcaaatcatataggcatttgctagaatacactcacttattttttagaag 16960411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 27255732 - 27255777
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttta 65  Q
    ||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  27255732 agcaaatcctataggcatttgctagaatacaccctcttatttttta 27255777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 32144072 - 32144121
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    |||||||| |||| ||||||||| | ||||||||| ||||||||||||||    
T  32144072 agcaactcttatatgcatttgctgggatacacccacttattttttagaag 32144121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 32716511 - 32716462
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| || |||| ||||||||||||||||||||| |||||||| |||||    
T  32716511 agcaaatcttataggcatttgctagaatacacccacttatttttaagaag 32716462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 44359840 - 44359755
Alignment:
Q  129 tttattttaagggttatactaactagtgccctaagggcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaat 214  Q
    ||||||||| ||||  | |||||||||||||| |||||| | ||||||||||| ||||||  ||  ||| || |||||||||||||    
T  44359840 tttattttatgggtcttgctaactagtgccctcagggcaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaat 44359755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 50797743 - 50797788
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttta 65  Q
    ||||||||||||||||| ||| ||||||| ||||| ||||||||||    
T  50797743 agcaactcctataagcacttgttagaatatacccacttatttttta 50797788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 52772326 - 52772375
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| || |||| ||||||||||||||||||||| |||||||| |||||    
T  52772326 agcaaatcttataggcatttgctagaatacacccacttatttttcagaag 52772375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 13943351 - 13943391
Alignment:
Q  29 tataagcatttgctagaatacacccatttattttttagaag 69  Q
    |||| ||||||| ||||||||||||| ||||||||||||||    
T  13943351 tataggcatttgttagaatacacccacttattttttagaag 13943391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 23413750 - 23413706
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt 64  Q
    |||||||||||| | |||||||||||||||| ||| |||||||||    
T  23413750 agcaactcctatgaacatttgctagaatacatccacttatttttt 23413706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 27935073 - 27935021
Alignment:
Q  214 ttttcaccatttttaaataaaatatttttaaatttgtccttttaaccaatgcc 266  Q
    |||||||||||||  |||| || |||||||| |||||| ||||||||||||||    
T  27935073 ttttcaccattttccaatacaaaatttttaagtttgtctttttaaccaatgcc 27935021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 32152005 - 32152049
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttatttttt 64  Q
    |||||||||||||  |||||||||| ||||||||| |||||||||    
T  32152005 agcaactcctatagacatttgctaggatacacccacttatttttt 32152049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 32268052 - 32268116
Alignment:
Q  202 tgaattcaacaattttcaccatttttaaataaaatatttttaaatttgtccttttaaccaatgcc 266  Q
    ||||||||||| |||||||||||||| || ||| ||||||||  | ||| ||||||| |||||||    
T  32268052 tgaattcaacacttttcaccatttttcaacaaattatttttatttatgttcttttaatcaatgcc 32268116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 36596554 - 36596606
Alignment:
Q  165 gcactagttaaggaaacaaaaaatgataagtttgcaatgaattcaacaatttt 217  Q
    ||||||||||| ||||  ||||||  |||||||||| ||||||||||||||||    
T  36596554 gcactagttaaagaaattaaaaatagtaagtttgcattgaattcaacaatttt 36596606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 36817730 - 36817778
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| ||||||| | |||||||||||||||| || |||||||||||||    
T  36817730 agcaaatcctataggaatttgctagaatacacacacttattttttagaa 36817778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 4174 - 4097
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||  || |||| ||||||||||||||||||||    
T  4174 agcaactcctataagcatttgcta-aatacacccacttattttttagaag-gtgtgtttgagcaagttataactaaaaag 4097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 20701 - 20779
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||  |  |||||||||||||||||||||||||    
T  20701 agcaactcctataggcatttgctaggatacacccacttattttttagaag-gtatgttttagcaagttataactaaaaag 20779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 6654 - 6576
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| ||||||||||| ||||| | ||||||||||||||||  ||  ||||||||||||||||||||||||    
T  6654 agcaactcctataggcatttgctaggatacatctatttattttttagaag-gtgtattttagcaagttataactaaaaag 6576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 58010 - 57961
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  58010 agcaaatcctataggcatttgctagaatacacccacttattttttagaag 57961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 679 - 601
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaagtttgggttttagcaagttataactaaaaag 99  Q
    ||||||||||||| |||||| |||| ||||||||| |||||||| |||||  |  ||||||||||| |||||||||||||    
T  679 agcaactcctataggcattttctaggatacacccacttatttttcagaag-gtatgttttagcaagctataactaaaaag 601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 2837 - 2796
Alignment:
Q  28 ctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||    
T  2837 ctataggcatttgttagaatacacccacttattttttagaag 2796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 14892 - 14851
Alignment:
Q  28 ctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||    
T  14892 ctataggcatttgttagaatacacccacttattttttagaag 14851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 452448 - 452497
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaag 69  Q
    ||||| || |||| ||||||| ||||||||||||| ||||||||||||||    
T  452448 agcaaatcgtataggcatttgttagaatacacccacttattttttagaag 452497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 26134 - 26182
Alignment:
Q  20 agcaactcctataagcatttgctagaatacacccatttattttttagaa 68  Q
    ||||| || |||| ||||||||||||||||||||| |||| ||||||||    
T  26134 agcaaatcttataggcatttgctagaatacacccacttatattttagaa 26182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University