View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1789_low_41 (Length: 216)
Name: NF1789_low_41
Description: NF1789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1789_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 27298038 - 27297853
Alignment:
| Q |
15 |
cagagaggtaaccctaattttcagaagcctcaatatccttaccaacagtattgacaaaatcctcaagaacctagaacacaaacacttgaggatacattaa |
114 |
Q |
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| T |
27298038 |
cagagaggtaaccctaattttcagaagcctcaatatccttagcaacagtattgacaaaatcctcaagaacctagaacacaaacacttgaggatacattaa |
27297939 |
T |
|
| Q |
115 |
aattgtttatgcaagtctctcttcagaaccaggaagacataaagccctcaatcaaagatatttgaggcacaattagagaagcttgg |
200 |
Q |
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| T |
27297938 |
aattgtttatgcaagtctctcttcagaaccaggaaaacataaagccctcaatcaaagatatttgaggcacaattagagaaacttgg |
27297853 |
T |
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