View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17901_low_22 (Length: 343)

Name: NF17901_low_22
Description: NF17901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17901_low_22
NF17901_low_22
[»] chr4 (20 HSPs)
chr4 (90-193)||(38690680-38690785)
chr4 (73-190)||(49811387-49811505)
chr4 (88-190)||(16556463-16556567)
chr4 (141-190)||(49607617-49607666)
chr4 (143-193)||(2931133-2931183)
chr4 (141-187)||(22525455-22525501)
chr4 (124-190)||(25234837-25234903)
chr4 (141-190)||(35733441-35733490)
chr4 (141-190)||(37574339-37574388)
chr4 (141-190)||(49607943-49607992)
chr4 (75-172)||(24570209-24570308)
chr4 (142-193)||(29889754-29889805)
chr4 (141-188)||(56555615-56555662)
chr4 (141-191)||(21200597-21200646)
chr4 (68-118)||(49607882-49607932)
chr4 (145-187)||(56360632-56360674)
chr4 (141-190)||(11491198-11491247)
chr4 (141-190)||(22341841-22341890)
chr4 (141-190)||(46283189-46283238)
chr4 (76-121)||(52366207-52366252)
[»] chr3 (27 HSPs)
chr3 (76-190)||(50676846-50676962)
chr3 (143-190)||(50271798-50271845)
chr3 (91-190)||(1102675-1102776)
chr3 (90-193)||(45431641-45431746)
chr3 (76-175)||(50381714-50381815)
chr3 (141-190)||(27394574-27394623)
chr3 (88-190)||(27471516-27471620)
chr3 (88-190)||(39739286-39739390)
chr3 (141-190)||(43897669-43897718)
chr3 (88-190)||(47864648-47864752)
chr3 (76-182)||(49429461-49429568)
chr3 (139-187)||(24651189-24651237)
chr3 (94-190)||(37756392-37756490)
chr3 (90-190)||(38414897-38414999)
chr3 (78-190)||(48717415-48717529)
chr3 (141-190)||(8930956-8931005)
chr3 (125-190)||(9320938-9321003)
chr3 (88-190)||(11483625-11483729)
chr3 (141-190)||(29645806-29645855)
chr3 (88-190)||(33528184-33528288)
chr3 (141-190)||(38668195-38668244)
chr3 (145-190)||(40415541-40415586)
chr3 (141-190)||(54457220-54457269)
chr3 (146-190)||(50332937-50332981)
chr3 (143-190)||(31435480-31435527)
chr3 (143-190)||(40412336-40412383)
chr3 (141-190)||(44062021-44062070)
[»] chr8 (12 HSPs)
chr8 (90-190)||(19957300-19957402)
chr8 (141-182)||(8145840-8145881)
chr8 (88-175)||(1032582-1032671)
chr8 (88-178)||(19733060-19733152)
chr8 (141-190)||(38064044-38064093)
chr8 (125-190)||(43413865-43413930)
chr8 (88-191)||(279975-280079)
chr8 (88-191)||(635773-635877)
chr8 (88-191)||(821576-821680)
chr8 (76-190)||(4259859-4259975)
chr8 (141-190)||(8349462-8349511)
chr8 (68-120)||(40444697-40444749)
[»] chr7 (18 HSPs)
chr7 (69-192)||(46243284-46243409)
chr7 (76-190)||(15025156-15025272)
chr7 (141-190)||(5228137-5228186)
chr7 (141-192)||(37665811-37665862)
chr7 (88-190)||(14707305-14707408)
chr7 (86-193)||(43440699-43440808)
chr7 (88-193)||(42554646-42554753)
chr7 (141-175)||(20529963-20529997)
chr7 (144-190)||(26606088-26606134)
chr7 (141-190)||(4956071-4956120)
chr7 (125-190)||(10624777-10624841)
chr7 (141-190)||(22156164-22156213)
chr7 (141-190)||(22212079-22212128)
chr7 (145-190)||(23602345-23602390)
chr7 (141-182)||(24575217-24575258)
chr7 (157-190)||(37563230-37563263)
chr7 (141-190)||(48433689-48433738)
chr7 (158-190)||(33342798-33342830)
[»] chr6 (15 HSPs)
chr6 (141-190)||(5641669-5641718)
chr6 (141-190)||(7164761-7164810)
chr6 (76-175)||(20415556-20415657)
chr6 (88-190)||(6228239-6228343)
chr6 (89-193)||(7954898-7955004)
chr6 (77-173)||(34368163-34368260)
chr6 (88-183)||(31703714-31703811)
chr6 (142-175)||(1183946-1183979)
chr6 (141-190)||(4854285-4854334)
chr6 (125-190)||(5757850-5757915)
chr6 (18-47)||(7961971-7962000)
chr6 (141-190)||(17217025-17217074)
chr6 (141-190)||(18903346-18903395)
chr6 (144-180)||(8330480-8330516)
chr6 (141-193)||(32344706-32344758)
[»] chr5 (8 HSPs)
chr5 (141-190)||(15680880-15680929)
chr5 (90-190)||(34729486-34729587)
chr5 (88-190)||(38503236-38503340)
chr5 (68-110)||(1931838-1931880)
chr5 (148-190)||(12256475-12256517)
chr5 (141-190)||(5039747-5039796)
chr5 (75-120)||(9628116-9628161)
chr5 (142-190)||(1572178-1572226)
[»] chr2 (15 HSPs)
chr2 (141-190)||(37886204-37886253)
chr2 (141-190)||(37592201-37592250)
chr2 (76-190)||(42678303-42678419)
chr2 (88-173)||(43684291-43684377)
chr2 (88-178)||(31149093-31149184)
chr2 (88-190)||(34107507-34107610)
chr2 (124-190)||(43027205-43027271)
chr2 (141-190)||(42541222-42541271)
chr2 (157-193)||(17376430-17376466)
chr2 (81-178)||(3330192-3330291)
chr2 (143-193)||(18424128-18424178)
chr2 (141-190)||(5207159-5207208)
chr2 (141-190)||(41541519-41541568)
chr2 (147-183)||(10745490-10745526)
chr2 (145-193)||(45201665-45201713)
[»] chr1 (22 HSPs)
chr1 (88-190)||(19424058-19424162)
chr1 (141-190)||(29332351-29332400)
chr1 (94-190)||(35195590-35195688)
chr1 (141-187)||(20267873-20267919)
chr1 (145-191)||(40288310-40288356)
chr1 (155-193)||(42851531-42851569)
chr1 (125-190)||(2350354-2350419)
chr1 (125-190)||(10123032-10123097)
chr1 (76-190)||(12973257-12973373)
chr1 (76-193)||(22853737-22853856)
chr1 (146-190)||(24253622-24253666)
chr1 (75-132)||(27160494-27160553)
chr1 (90-190)||(8310668-8310769)
chr1 (88-190)||(50302830-50302934)
chr1 (125-183)||(8893911-8893969)
chr1 (95-190)||(42946446-42946543)
chr1 (125-190)||(22779274-22779339)
chr1 (134-175)||(27980127-27980168)
chr1 (125-190)||(41618739-41618804)
chr1 (141-182)||(46532482-46532523)
chr1 (141-178)||(49895802-49895839)
chr1 (145-190)||(52720755-52720800)
[»] scaffold0015 (1 HSPs)
scaffold0015 (143-190)||(63841-63889)
[»] scaffold0001 (1 HSPs)
scaffold0001 (141-190)||(419779-419828)


Alignment Details
Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 38690680 - 38690785
Alignment:
Q  90 ttggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagacta 187  Q
    ||||||||||||||||||||  ||||||||||   ||  |||||| |||  | ||||||||||||||||||||||||||||||||||| ||||||| |||    
T  38690680 ttggtaagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattctcctttaaggtgaatttctctagccgctaggcta 38690779  T
Q  188 cttaac 193  Q
    ||||||    
T  38690780 cttaac 38690785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 49811505 - 49811387
Alignment:
Q  73 atgtgagtttaacttatttggtaagggataatgcataacatatgcagggtaagg-ttcgaaaccctaataccccacttattctcctttaaggtgaatttc 171  Q
    ||||||| ||| || | ||||||||| ||||||||||  ||||| ||||  ||| |||||| || ||||||||||||||||| |||||||| ||||||||    
T  49811505 atgtgagcttatctcacttggtaaggaataatgcatattatatgtaggggcagggttcgaacccataataccccacttattcacctttaagatgaatttc 49811406  T
Q  172 tctaaccgctagactactt 190  Q
    |||| ||||||| ||||||    
T  49811405 tctagccgctaggctactt 49811387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 16556463 - 16556567
Alignment:
Q  88 atttggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagac 185  Q
    |||||||||||||||||||| || || |||||||   ||  |||||| ||| || |||||||||||||  |||||||||||||||||||| || |||| |    
T  16556463 atttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccccgaacaccccacttattcatctttaaggtgaatttctctagccactaggc 16556562  T
Q  186 tactt 190  Q
    |||||    
T  16556563 tactt 16556567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 49607617 - 49607666
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  49607617 accccacttattcacctttaaggtgaatttctctagccgatagactactt 49607666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 2931133 - 2931183
Alignment:
Q  143 cccacttattctcctttaaggtgaatttctctaaccgctagactacttaac 193  Q
    |||||||||||  |||||||||||||||||||| || ||||||||||||||    
T  2931133 cccacttattcatctttaaggtgaatttctctagccactagactacttaac 2931183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 22525455 - 22525501
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagacta 187  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||    
T  22525455 accccacttattcacctttaagatgaatttctctaaccgctggacta 22525501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 25234903 - 25234837
Alignment:
Q  124 aggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||| |||  | |||||| ||||||  ||||||||||||||||||||||| |||||||||||    
T  25234903 aggttcgaaccccagacaccccagttattcatctttaaggtgaatttctctaaccactagactactt 25234837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 35733441 - 35733490
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| |||||||||||| ||||| || ||||||||||||||    
T  35733441 accccacttattcacctttaaggtgagtttctttagccgctagactactt 35733490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 37574339 - 37574388
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| ||||||||||||||||||||| || |||| ||||||    
T  37574339 accccacttattcacctttaaggtgaatttctctagccactaggctactt 37574388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 49607943 - 49607992
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||  ||||||||||||||||||||| || |||||||||||    
T  49607943 accccacttatttacctttaaggtgaatttctctagccactagactactt 49607992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 24570209 - 24570308
Alignment:
Q  75 gtgagtttaacttatttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttct 172  Q
    ||||| ||||| | ||||||||||||||||||| || ||||| ||||  |  |||||||| ||| || |||| ||||||||  |||||||||||||||||    
T  24570209 gtgagcttaacatttttggtaagggataatgcacaatatatgtaggggttggggttcgaaccccgaacaccctacttattcaactttaaggtgaatttct 24570308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 29889805 - 29889754
Alignment:
Q  142 ccccacttattctcctttaaggtgaatttctctaaccgctagactacttaac 193  Q
    ||||| |||||| | ||||||||||||||||||| ||||||| |||||||||    
T  29889805 ccccatttattcacatttaaggtgaatttctctagccgctaggctacttaac 29889754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 56555615 - 56555662
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactac 188  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||| ||||    
T  56555615 accccacttattcacctttaaggtgaatttctctagccgttaggctac 56555662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 21200597 - 21200646
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactta 191  Q
    ||||||||||||| | ||||||||||||||||||| ||| |||||||||||    
T  21200597 accccacttattcac-tttaaggtgaatttctctagccgttagactactta 21200646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 49607882 - 49607932
Alignment:
Q  68 tgtccatgtgagtttaacttatttggtaagggataatgcataacatatgca 118  Q
    |||||||||||| ||| |||| ||||||||||||||||||||  |||||||    
T  49607882 tgtccatgtgagcttagcttacttggtaagggataatgcatattatatgca 49607932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 56360632 - 56360674
Alignment:
Q  145 cacttattctcctttaaggtgaatttctctaaccgctagacta 187  Q
    ||||||||| ||||||||||||||||||||||| | |||||||    
T  56360632 cacttattcacctttaaggtgaatttctctaactgttagacta 56360674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 11491247 - 11491198
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  |||||||||||||||||||| || |||| ||||||    
T  11491247 accccacttattcatctttaaggtgaatttctctagccactaggctactt 11491198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 22341890 - 22341841
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||| |||  ||| |||||||||||||||||||||||| ||||||    
T  22341890 accccacttgttcatcttaaaggtgaatttctctaaccgctaggctactt 22341841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 46283189 - 46283238
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  ||||||||||||||||||||  | |||||||||||    
T  46283189 accccacttattcatctttaaggtgaatttctctagtcactagactactt 46283238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 52366207 - 52366252
Alignment:
Q  76 tgagtttaacttatttggtaagggataatgcataacatatgcaggg 121  Q
    ||||||||||| |||||||||||||||||||| || || |||||||    
T  52366207 tgagtttaactcatttggtaagggataatgcacaatatgtgcaggg 52366252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 50676962 - 50676846
Alignment:
Q  76 tgagtttaacttatttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctc 173  Q
    ||||||||||| | ||||||||||| ||| ||||  ||||| ||||  |  |||||||| ||| || ||||||||||||| |||||||||||||||||||    
T  50676962 tgagtttaactcacttggtaagggacaatacatattatatgtaggggttggggttcgaaccccgaacaccccacttattcacctttaaggtgaatttctc 50676863  T
Q  174 taaccgctagactactt 190  Q
    ||||| |||||||||||    
T  50676862 taaccactagactactt 50676846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 50271798 - 50271845
Alignment:
Q  143 cccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50271798 cccacttattcacctttaaggtgaatttctctaaccgctagactactt 50271845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 1102776 - 1102675
Alignment:
Q  91 tggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactac 188  Q
    ||||||||||||||||||||  ||||||||| | ||  |||||| |    | ||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  1102776 tggtaagggataatgcataatttatgcaggggacggagttcgaaccatggacaccccacttattcacctttaaggtgaatttctctagccgctaggctac 1102677  T
Q  189 tt 190  Q
    ||    
T  1102676 tt 1102675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 45431641 - 45431746
Alignment:
Q  90 ttggtaagggataatgcataacatatgcagggt--aaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagacta 187  Q
    ||||||||||||||||| ||   |||||||||   | |||||||| |||  | ||||||||||||| ||||||||||||||||| ||| ||||||| |||    
T  45431641 ttggtaagggataatgcgtattttatgcaggggtcagggttcgaaccccggacaccccacttattcacctttaaggtgaatttccctagccgctaggcta 45431740  T
Q  188 cttaac 193  Q
    ||||||    
T  45431741 cttaac 45431746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 50381714 - 50381815
Alignment:
Q  76 tgagtttaacttatttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctc 173  Q
    |||| |||||| |||||||||||||||||||| || ||||||||||     |||||||| |||  | |||||||||||||  ||||||||||||||||||    
T  50381714 tgagcttaactcatttggtaagggataatgcacaatatatgcaggggtcggggttcgaatcccggacaccccacttattcatctttaaggtgaatttctc 50381813  T
Q  174 ta 175  Q
    ||    
T  50381814 ta 50381815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 27394574 - 27394623
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  27394574 accccacttattcacctttaaggtgaatttctctagccgctaggctactt 27394623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 27471516 - 27471620
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagac 185  Q
    ||||||||||||||||||||||| || | |||||  |  |||||||| |||  | |||||||||||||  ||||||||| |||||||||| || ||||||    
T  27471516 atttggtaagggataatgcataatatgtacaggggttggggttcgaaccccggacaccccacttattcatctttaaggtaaatttctctagccactagac 27471615  T
Q  186 tactt 190  Q
    |||||    
T  27471616 tactt 27471620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 39739286 - 39739390
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagac 185  Q
    |||||||||||||||||||| || || |||||||  |  |||||||| |||  | ||| |||||||||  |||||||||||||||||||| || ||||||    
T  39739286 atttggtaagggataatgcacaatatgtgcagggattggggttcgaaccccggacacctcacttattcatctttaaggtgaatttctctagccactagac 39739385  T
Q  186 tactt 190  Q
    |||||    
T  39739386 tactt 39739390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 43897669 - 43897718
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  43897669 accccacttattcacctttaaggtgaatttctctaaccgttaggctactt 43897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 47864648 - 47864752
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagac 185  Q
    |||||||||||||||||||| || || |||||||  |  |||||||| |||  | |||||||||||||  |||||||||||||||||||| || |||| |    
T  47864648 atttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagccactaggc 47864747  T
Q  186 tactt 190  Q
    |||||    
T  47864748 tactt 47864752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 182
Target Start/End: Original strand, 49429461 - 49429568
Alignment:
Q  76 tgagtttaacttatttggtaagggataatgcataacatatgcagggt--aaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctc 173  Q
    |||| |||||| |||||||||||||||||||||    |||||||||   | |||||||| |||  | ||||||||||||| |||||||||||||||||||    
T  49429461 tgagcttaactcatttggtaagggataatgcatttg-tatgcagggaccagggttcgaaccccggacaccccacttattcacctttaaggtgaatttctc 49429559  T
Q  174 taaccgcta 182  Q
    || ||||||    
T  49429560 tagccgcta 49429568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 24651189 - 24651237
Alignment:
Q  139 ataccccacttattctcctttaaggtgaatttctctaaccgctagacta 187  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  24651189 atacctcacttattcacctttaaggtgaatttctctaaccgctggacta 24651237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 190
Target Start/End: Complemental strand, 37756490 - 37756392
Alignment:
Q  94 taagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||||||  |||||||||  |  |||||||| ||| || ||||||||||||| ||||||| |||| |||||||  ||||||| ||||||    
T  37756490 taagggataatgcataatttatgcaggggctggggttcgaaccccaaacaccccacttattcacctttaacgtgagtttctctcgccgctaggctactt 37756392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 190
Target Start/End: Original strand, 38414897 - 38414999
Alignment:
Q  90 ttggtaagggataatgcataacatatgcagggt--aaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagacta 187  Q
    ||||||||||||||||||||  ||||||||||   | |||| |||  |  || ||||||||||||| ||||||||||||||||||||  ||||||| |||    
T  38414897 ttggtaagggataatgcatattatatgcaggggtcagggtttgaactctgaacaccccacttattcacctttaaggtgaatttctctggccgctaggcta 38414996  T
Q  188 ctt 190  Q
    |||    
T  38414997 ctt 38414999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 48717415 - 48717529
Alignment:
Q  78 agtttaacttatttggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtgaatttctcta 175  Q
    ||||||||| ||||||||||| ||||| ||| |  |||||||||  |||  |||||| ||| || ||||||||| |||  |||||||||||||||||| |    
T  48717415 agtttaactcatttggtaaggaataatacattatgtatgcaggggtaggggttcgaaccccaaacaccccactttttcatctttaaggtgaatttctcca 48717514  T
Q  176 accgctagactactt 190  Q
     |||||| |||||||    
T  48717515 gccgctaaactactt 48717529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 8931005 - 8930956
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||| ||||||    
T  8931005 accccacttattcacctttaaagtgaatttctctagccgctaggctactt 8930956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 9321003 - 9320938
Alignment:
Q  125 ggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||| || |||||||||||||  ||| ||| ||||||||||||||| |||| ||||||    
T  9321003 ggttcgaaacccgaacaccccacttattcatcttaaagatgaatttctctaaccactaggctactt 9320938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 11483625 - 11483729
Alignment:
Q  88 atttggtaagggataatgcataacatatgcagggt--aaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagac 185  Q
    |||||||||||||||||||| || || |||||||   | ||||||||  ||  | |||||||||||||  |||||||||||||||||||| |  ||||||    
T  11483625 atttggtaagggataatgcaaaatatgtgcaggggccagggttcgaactccggacaccccacttattcatctttaaggtgaatttctctagcaactagac 11483724  T
Q  186 tactt 190  Q
    |||||    
T  11483725 tactt 11483729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 29645855 - 29645806
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  |||||||||||||||||||| || |||||||||||    
T  29645855 accccacttattcatctttaaggtgaatttctctagccactagactactt 29645806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 33528288 - 33528184
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagac 185  Q
    |||||||||||||||||||| ||  | |||||||  |  |||||||| |||  | |||||||||||||  |||||||||||||||||||| || |||| |    
T  33528288 atttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaatttctctagccactaggc 33528189  T
Q  186 tactt 190  Q
    |||||    
T  33528188 tactt 33528184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 38668195 - 38668244
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  |||||||||||||||||||| || |||||||||||    
T  38668195 accccacttattcatctttaaggtgaatttctctagccactagactactt 38668244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 40415586 - 40415541
Alignment:
Q  145 cacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||    
T  40415586 cacttattcacttttaaggtgaatttctctaacagctagactactt 40415541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 54457220 - 54457269
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||| |||||| ||||||||||||||||||||| ||||||| ||||||    
T  54457220 accccatttattcacctttaaggtgaatttctctagccgctaggctactt 54457269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 50332981 - 50332937
Alignment:
Q  146 acttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||    
T  50332981 acttattcacctttaagatgaatttctctagccgctagactactt 50332937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 31435527 - 31435480
Alignment:
Q  143 cccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||  |||||||||||||||||||| || |||||||||||    
T  31435527 cccacttattcatctttaaggtgaatttctctagccactagactactt 31435480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 40412336 - 40412383
Alignment:
Q  143 cccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||| ||||||| ||||||||||||||||| |||| |||||    
T  40412336 cccacttattcacctttaaagtgaatttctctaaccgttagagtactt 40412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 44062070 - 44062021
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  ||||||||||||| |||||| || |||||||||||    
T  44062070 accccacttattcatctttaaggtgaatgtctctagccactagactactt 44062021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 190
Target Start/End: Complemental strand, 19957402 - 19957300
Alignment:
Q  90 ttggtaagggataatgcataacatatgcagggta--aggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagacta 187  Q
    ||||||||||||||||||||  |||||||||| |  ||||||||| |||  | ||||||||||||| ||||||||||||||||||||| | ||||| |||    
T  19957402 ttggtaagggataatgcatattatatgcaggggacgaggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagcagctaggcta 19957303  T
Q  188 ctt 190  Q
    |||    
T  19957302 ctt 19957300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 8145840 - 8145881
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgcta 182  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  8145840 accccacttattcacctttaaggtgaatttctctaaccgcta 8145881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 1032582 - 1032671
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctcta 175  Q
    |||||||||||||||||||| || || |||||||  |  |||||||| |||  | |||||||||||||  ||||||||||||||||||||    
T  1032582 atttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaatttctcta 1032671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 19733152 - 19733060
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaacc 178  Q
    ||||||||||||||||||||||| ||||||||||     |||||||| ||| || |||  | ||||||  |||||||||||||||||||||||    
T  19733152 atttggtaagggataatgcataatatatgcaggggtcggggttcgaatcccgaacacctaaattattcatctttaaggtgaatttctctaacc 19733060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 38064044 - 38064093
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  ||||||||||||||||||||||| || ||||||||    
T  38064044 accccacttattcatctttaaggtgaatttctctaaccactggactactt 38064093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 43413930 - 43413865
Alignment:
Q  125 ggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||| ||| || |||||||||||||  |||||||||||||||||||| || |||| ||||||    
T  43413930 ggttcgaatcccaaacaccccacttattcatctttaaggtgaatttctctagccactaggctactt 43413865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 191
Target Start/End: Complemental strand, 280079 - 279975
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg-taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagact 186  Q
    |||||||||||||||||| | || || ||||||| || |||||||| |||  | |||| | ||||||   |||||||||||||||||||  |||||||||    
T  280079 atttggtaagggataatgtacaatatgtgcaggggtagggttcgaaccccggacacccaatttattcatttttaaggtgaatttctctagtcgctagact 279980  T
Q  187 actta 191  Q
    |||||    
T  279979 actta 279975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 191
Target Start/End: Original strand, 635773 - 635877
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg-taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagact 186  Q
    |||||||||||||||||| | || || ||||||| || |||||||| |||  | |||| | ||||||   |||||||||||||||||||  |||||||||    
T  635773 atttggtaagggataatgtacaatatgtgcaggggtagggttcgaaccccggacacccaatttattcatttttaaggtgaatttctctagtcgctagact 635872  T
Q  187 actta 191  Q
    |||||    
T  635873 actta 635877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 191
Target Start/End: Original strand, 821576 - 821680
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg-taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagact 186  Q
    |||||||||||||||||| | || || ||||||| || |||||||| |||  | |||| | ||||||   |||||||||||||||||||  |||||||||    
T  821576 atttggtaagggataatgtacaatatgtgcaggggtagggttcgaaccccggacacccaatttattcatttttaaggtgaatttctctagtcgctagact 821675  T
Q  187 actta 191  Q
    |||||    
T  821676 actta 821680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 4259859 - 4259975
Alignment:
Q  76 tgagtttaacttatttggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtgaatttctc 173  Q
    |||| |||||| |||||||||||||||||||| || || |||||||   ||  ||| || |||  |  ||||||||||||  ||||||||||||||||||    
T  4259859 tgagcttaactcatttggtaagggataatgcacaatatgtgcaggggccggggttccaaccccggactccccacttattcatctttaaggtgaatttctc 4259958  T
Q  174 taaccgctagactactt 190  Q
    || || |||| ||||||    
T  4259959 tagccactaggctactt 4259975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 8349511 - 8349462
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  ||||||| ||||||| ||||||| |||||||||||    
T  8349511 accccacttattcatctttaagatgaatttatctaaccactagactactt 8349462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 40444697 - 40444749
Alignment:
Q  68 tgtccatgtgagtttaacttatttggtaagggataatgcataacatatgcagg 120  Q
    |||||| ||||| ||| || | ||||||||||||||||||||| |||||||||    
T  40444697 tgtccacgtgagcttagctcacttggtaagggataatgcataatatatgcagg 40444749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 46243284 - 46243409
Alignment:
Q  69 gtccatgtgagtttaacttatttggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtga 166  Q
    |||| |||||| ||| || ||||||||||||||||||||||  ||||  ||||   ||  ||||||  || || ||||||||||||| ||||||||||||    
T  46243284 gtccctgtgagcttagctcatttggtaagggataatgcatattatatatagggatcggagttcgaactccgaacaccccacttattcacctttaaggtga 46243383  T
Q  167 atttctctaaccgctagactacttaa 192  Q
    |||||||||||||||||| |||||||    
T  46243384 atttctctaaccgctagaatacttaa 46243409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 15025156 - 15025272
Alignment:
Q  76 tgagtttaacttatttggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtgaatttctc 173  Q
    |||| |||||| ||||||||||||||||||||||   ||| |||||   ||  ||| || ||| || ||||||||||||| |||||||||||||||||||    
T  15025156 tgagcttaactcatttggtaagggataatgcatattttatacaggggccggggttcaaaccccgaacaccccacttattcacctttaaggtgaatttctc 15025255  T
Q  174 taaccgctagactactt 190  Q
    || ||||||| ||||||    
T  15025256 tacccgctaggctactt 15025272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 5228137 - 5228186
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  5228137 accccacttattcacctttaaggtgaatttctctagccgctaggctactt 5228186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 37665811 - 37665862
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactacttaa 192  Q
    ||||||||||||| |||||||||||||||||| || || |||||||||||||    
T  37665811 accccacttattcgcctttaaggtgaatttctttagccactagactacttaa 37665862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 14707305 - 14707408
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagac 185  Q
    |||||||||||||||||||||   ||||||||||  |  |||||||| |||  | ||||||||||||| ||||||  ||||||||||||| ||| |||||    
T  14707305 atttggtaagggataatgcattt-atatgcaggggttggggttcgaaccccggacaccccacttattcacctttatagtgaatttctctagccgttagac 14707403  T
Q  186 tactt 190  Q
    |||||    
T  14707404 tactt 14707408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 43440699 - 43440808
Alignment:
Q  86 ttatttggtaagggataatgcataacatatgcag-ggtaagg-ttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctag 183  Q
    |||||||||||||||||||||| || || ||||| |||  || ||||||  ||  | |||||||||||||  |||||||||||||||||||| || ||||    
T  43440699 ttatttggtaagggataatgcacaatatgtgcagaggtcggggttcgaattccagacaccccacttattcatctttaaggtgaatttctctagccactag 43440798  T
Q  184 actacttaac 193  Q
    |||| |||||    
T  43440799 actatttaac 43440808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 42554646 - 42554753
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagac 185  Q
    |||||||||||||||||||| || || |||||||  |  |||||||| |||  |||||| ||||||||  ||||| |||||||||| ||| || ||||||    
T  42554646 atttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggatacccgacttattcatctttatggtgaatttccctagccactagac 42554745  T
Q  186 tacttaac 193  Q
    || |||||    
T  42554746 tatttaac 42554753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 20529963 - 20529997
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctcta 175  Q
    ||||||||||||| |||||||||||||||||||||    
T  20529963 accccacttattcacctttaaggtgaatttctcta 20529997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 26606134 - 26606088
Alignment:
Q  144 ccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||| ||||||||||||||||||||| ||||| | ||||||    
T  26606134 ccacttattcacctttaaggtgaatttctctagccgcttggctactt 26606088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 4956120 - 4956071
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  |||||||||||||||||||| || |||| ||||||    
T  4956120 accccacttattcatctttaaggtgaatttctctagccactaggctactt 4956071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 10624841 - 10624777
Alignment:
Q  125 ggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||| ||| || ||| ||||||||| | ||||||||||||||||||| ||||| ||||||||    
T  10624841 ggttcgaaccccaaacaccgcacttattcac-tttaaggtgaatttctctagccgcttgactactt 10624777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 22156164 - 22156213
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  || |||| ||||||||||||||| |||||||||||    
T  22156164 accccacttattcatctataagatgaatttctctaaccactagactactt 22156213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 22212079 - 22212128
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  || |||| ||||||||||||||| |||||||||||    
T  22212079 accccacttattcatctataagatgaatttctctaaccactagactactt 22212128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 23602345 - 23602390
Alignment:
Q  145 cacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||| |||||||||||||||||| || || |||||||||||    
T  23602345 cacttattcacctttaaggtgaatttctttagccactagactactt 23602390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 24575217 - 24575258
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgcta 182  Q
    |||| |||||||| |||||||| |||||||||||||||||||    
T  24575217 accctacttattcacctttaagatgaatttctctaaccgcta 24575258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 37563263 - 37563230
Alignment:
Q  157 tttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||| |||||||||||||||||||||||||||    
T  37563263 tttaagatgaatttctctaaccgctagactactt 37563230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 48433738 - 48433689
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  |||||||||||||||||||| || |||| ||||||    
T  48433738 accccacttattcatctttaaggtgaatttctctagccactaggctactt 48433689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 33342830 - 33342798
Alignment:
Q  158 ttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||||||| ||||||||||||||    
T  33342830 ttaaggtgaatttctctagccgctagactactt 33342798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 5641718 - 5641669
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  5641718 accccacttattcacctttaaggtgaatttctctagccgctagactactt 5641669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 7164761 - 7164810
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  7164761 accccacttattcacctttaaggtgaatttctctagccgctagactactt 7164810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 20415657 - 20415556
Alignment:
Q  76 tgagtttaacttatttggtaagggataatgcataacatatgcagggt--aaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctc 173  Q
    |||||||| || |||| ||||||||||||||| || || |||||||   | |||||||| |||  | |||||||||||||  ||||||||||||||||||    
T  20415657 tgagtttagctcattttgtaagggataatgcacaatatgtgcaggggccagggttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 20415558  T
Q  174 ta 175  Q
    ||    
T  20415557 ta 20415556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 6228343 - 6228239
Alignment:
Q  88 atttggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagac 185  Q
    |||||||||||||||||||| || || |||||||   ||  |||||| |||  | |||||||||||||  |||||||||||||||||||| || |||| |    
T  6228343 atttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagccactaggc 6228244  T
Q  186 tactt 190  Q
    |||||    
T  6228243 tactt 6228239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 7955004 - 7954898
Alignment:
Q  89 tttggtaagggataatgcataacatatgcagggta--aggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagact 186  Q
    ||||||||||||||||||| || || |||||||    |||| |||| ||| || | |||||||||||  ||||||| |||||||||||| || |||| ||    
T  7955004 tttggtaagggataatgcacaatatgtgcagggggcgaggtgcgaaccccgaacatcccacttattcatctttaagatgaatttctctagccactaggct 7954905  T
Q  187 acttaac 193  Q
    |||||||    
T  7954904 acttaac 7954898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 173
Target Start/End: Original strand, 34368163 - 34368260
Alignment:
Q  77 gagtttaacttatttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctc 173  Q
    |||||||||||| ||| ||| ||||||||||| | ||||||||||  | ||||||||| |||  |||| |||||||||  |||||||| ||||||||||    
T  34368163 gagtttaacttacttgataaaggataatgcat-atatatgcaggggttgaggttcgaaccccggatacaccacttatttacctttaagatgaatttctc 34368260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 31703811 - 31703714
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctag 183  Q
    ||||||||| ||||||||||||  |||| | |||  | ||||||||| |||||| ||| ||||||||| | |||||| ||||||||| || |||||||    
T  31703811 atttggtaaaggataatgcatattatatactggggttgaggttcgaacccctaacacctcacttattcacttttaagatgaatttctttagccgctag 31703714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 1183979 - 1183946
Alignment:
Q  142 ccccacttattctcctttaaggtgaatttctcta 175  Q
    |||||||||||| |||||||||||||||||||||    
T  1183979 ccccacttattcacctttaaggtgaatttctcta 1183946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 4854334 - 4854285
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  ||||||||| ||||||||||||| |||| ||||||    
T  4854334 accccacttattcatctttaaggtaaatttctctaaccactagcctactt 4854285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 5757915 - 5757850
Alignment:
Q  125 ggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||| ||| || ||| ||||||||| | ||||||||||||||||||| |||| || ||||||    
T  5757915 ggttcgaaccccgaacacctcacttattcacatttaaggtgaatttctctagccgccaggctactt 5757850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 47
Target Start/End: Original strand, 7961971 - 7962000
Alignment:
Q  18 aagtgttttctgatctgcatcactctactt 47  Q
    ||||||||||||||||||||||||||||||    
T  7961971 aagtgttttctgatctgcatcactctactt 7962000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 17217025 - 17217074
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  |||||||||||||||||||| || |||| ||||||    
T  17217025 accccacttattcatctttaaggtgaatttctctagccactaggctactt 17217074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 18903395 - 18903346
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  |||||||||||||||||||| || |||| ||||||    
T  18903395 accccacttattcatctttaaggtgaatttctctagccactaggctactt 18903346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 8330516 - 8330480
Alignment:
Q  144 ccacttattctcctttaaggtgaatttctctaaccgc 180  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  8330516 ccacttattcacctttaaggtgaatttctctagccgc 8330480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 32344706 - 32344758
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactacttaac 193  Q
    ||||||||||||| ||||||| |||||||||  || ||| |||||||||||||    
T  32344706 accccacttattcacctttaaagtgaatttccttagccgttagactacttaac 32344758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 15680929 - 15680880
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  15680929 accccacttattcacctttaaggtgaatttctctaaccgctaggctactt 15680880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 190
Target Start/End: Original strand, 34729486 - 34729587
Alignment:
Q  90 ttggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagacta 187  Q
    ||||||||||||||||||||  ||||||||||   ||  |||||| |||  | ||||||||||||| |||||||||||||||||||||||||||  ||||    
T  34729486 ttggtaagggataatgcatattatatgcaggggtcggggttcgaa-cccggacaccccacttattcacctttaaggtgaatttctctaaccgcttaacta 34729584  T
Q  188 ctt 190  Q
    |||    
T  34729585 ctt 34729587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 38503340 - 38503236
Alignment:
Q  88 atttggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagac 185  Q
    |||||||||||||||||||| || || |||||||   ||  |||||| |||  | |||||||||||||  |||||||||||||||||||| ||  |||||    
T  38503340 atttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagccaatagac 38503241  T
Q  186 tactt 190  Q
    |||||    
T  38503240 tactt 38503236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 1931880 - 1931838
Alignment:
Q  68 tgtccatgtgagtttaacttatttggtaagggataatgcataa 110  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||    
T  1931880 tgtccacgtgagcttagcttatttggtaagggataatgcataa 1931838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 12256517 - 12256475
Alignment:
Q  148 ttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||    
T  12256517 ttattcacctttaaggtgaatttctctagccgctaggctactt 12256475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 5039747 - 5039796
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  ||||||||| |||||||||| || |||||||||||    
T  5039747 accccacttattcatctttaaggtaaatttctctagccactagactactt 5039796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 9628116 - 9628161
Alignment:
Q  75 gtgagtttaacttatttggtaagggataatgcataacatatgcagg 120  Q
    ||||| |||||| |||||||||| |||||||||||| |||||||||    
T  9628116 gtgagcttaactcatttggtaagagataatgcataatatatgcagg 9628161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 1572178 - 1572226
Alignment:
Q  142 ccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||  ||| |||||||||||||||| || |||||||||||    
T  1572178 ccccacttattcatcttaaaggtgaatttctctagccactagactactt 1572226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 37886253 - 37886204
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  37886253 accccacttattcacctttaaggtgaatttctctaaccgttagactactt 37886204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 37592250 - 37592201
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  37592250 accccacttatttacctttaaggtgaatttctctagccgctagactactt 37592201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 42678419 - 42678303
Alignment:
Q  76 tgagtttaacttatttggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtgaatttctc 173  Q
    ||||||||||||| |||||||||||||||||| || ||  | ||||   ||  |||||| |||  | |||||||||||||  ||||||||||||||||||    
T  42678419 tgagtttaacttacttggtaagggataatgcacaatatgcgtagggatcggagttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 42678320  T
Q  174 taaccgctagactactt 190  Q
    ||||| ||||| |||||    
T  42678319 taaccactagattactt 42678303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 43684291 - 43684377
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctc 173  Q
    |||||||||||||||||||||    |||||||||  | ||||||||| ||| || ||||||||||||| |||||||||||||||||||    
T  43684291 atttggtaagggataatgcatttg-tatgcaggggctgaggttcgaaccccgaacaccccacttattcacctttaaggtgaatttctc 43684377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 31149184 - 31149093
Alignment:
Q  88 atttggtaagggataatgcataacatatgcagggta-aggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaacc 178  Q
    |||||||||||||||||||| || || ||||||||  ||||||||| |||  | ||||||||| ||   |||||||||||||||||||||||    
T  31149184 atttggtaagggataatgcacaatatgtgcagggttgaggttcgaaccccagacaccccactttttaatctttaaggtgaatttctctaacc 31149093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 34107507 - 34107610
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg-taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagact 186  Q
    |||||||||||||||||||| || || ||||||| | ||| |  ||||||  | |||||||||||||  |||||||||||||||||||| || |||| ||    
T  34107507 atttggtaagggataatgcacaatatgtgcaggggtcagggttcaaacccggacaccccacttattcatctttaaggtgaatttctctagccactaggct 34107606  T
Q  187 actt 190  Q
    ||||    
T  34107607 actt 34107610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 43027205 - 43027271
Alignment:
Q  124 aggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||| |||  | |||||| |||||| ||||||||||||||||||||| || |||||||||||    
T  43027205 aggttcgaaccccagacaccccatttattcacctttaaggtgaatttctctagccactagactactt 43027271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 42541222 - 42541271
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||| || ||||||||||||||||||||| ||||||| ||||||    
T  42541222 accccacttactcacctttaaggtgaatttctctagccgctaggctactt 42541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 17376466 - 17376430
Alignment:
Q  157 tttaaggtgaatttctctaaccgctagactacttaac 193  Q
    ||||||||||||||||||||||||||| |||||||||    
T  17376466 tttaaggtgaatttctctaaccgctaggctacttaac 17376430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 178
Target Start/End: Complemental strand, 3330291 - 3330192
Alignment:
Q  81 ttaacttatttggtaagggataatgcataacatatgcag-ggtaag-gttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaacc 178  Q
    |||||| |||| ||||||||||||||| || || ||||| |||  | ||||||| |||  | |||||||||||||  |||||||||||||||||||||||    
T  3330291 ttaactcatttagtaagggataatgcacaatatgtgcagaggtcggagttcgaaccccggacaccccacttattcatctttaaggtgaatttctctaacc 3330192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 18424178 - 18424128
Alignment:
Q  143 cccacttattctcctttaaggtgaatttctctaaccgctagactacttaac 193  Q
    |||||||||||  |||||||||||||||||||| || |||| |||||||||    
T  18424178 cccacttattcatctttaaggtgaatttctctagccactaggctacttaac 18424128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 5207159 - 5207208
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| |||||||| ||||||||| || || |||||||||||    
T  5207159 accccacttattcacctttaagatgaatttctttagccactagactactt 5207208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 41541568 - 41541519
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| | ||||||||||||||||||  ||||||| ||||||    
T  41541568 accccacttattcacttttaaggtgaatttctctggccgctaggctactt 41541519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 10745526 - 10745490
Alignment:
Q  147 cttattctcctttaaggtgaatttctctaaccgctag 183  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  10745526 cttattcacctttaaggtgaatttatctaaccgctag 10745490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 45201665 - 45201713
Alignment:
Q  145 cacttattctcctttaaggtgaatttctctaaccgctagactacttaac 193  Q
    ||||||||| | |||||||||||||| |||| | |||||||||||||||    
T  45201665 cacttattcacttttaaggtgaatttttctagctgctagactacttaac 45201713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 19424058 - 19424162
Alignment:
Q  88 atttggtaagggataatgcataacatatgcagggtaagg--ttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagac 185  Q
    ||||| ||||||||||||||||  ||||||||||   ||  |||||| |||  | ||||||||||||| ||||||||||||||||||||| ||||||| |    
T  19424058 atttgataagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagccgctaggc 19424157  T
Q  186 tactt 190  Q
    |||||    
T  19424158 tactt 19424162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 29332351 - 29332400
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  29332351 accccacttattcacctttaaggtgaatttctctagccgctaggctactt 29332400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 190
Target Start/End: Complemental strand, 35195688 - 35195590
Alignment:
Q  94 taagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||||||||  ||||||||||   | |||||||| |||  | || |||||||||| |||||||||| |||||||||| ||||||| ||||||    
T  35195688 taagggataatgcatattatatgcagggaccagggttcgaaccccgtacactccacttattcacctttaaggtaaatttctctagccgctaggctactt 35195590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 20267919 - 20267873
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagacta 187  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||    
T  20267919 accccacttatttacctttaaggtgaatttctctaaccactagacta 20267873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 40288310 - 40288356
Alignment:
Q  145 cacttattctcctttaaggtgaatttctctaaccgctagactactta 191  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||||    
T  40288310 cacttattcacttttaagatgaatttctctaaccgctagactactta 40288356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 42851531 - 42851569
Alignment:
Q  155 cctttaaggtgaatttctctaaccgctagactacttaac 193  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  42851531 cctttaaggtgaatttctctaaccgctaaactacttaac 42851569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 2350419 - 2350354
Alignment:
Q  125 ggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||| ||| || ||||||||||||| ||||||| |||||||||| || ||||||| ||||||    
T  2350419 ggttcgaaccccgaacaccccacttattcacctttaaagtgaatttctttagccgctaggctactt 2350354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 10123097 - 10123032
Alignment:
Q  125 ggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||| ||| || |||||||||||||  |||||||||||||||||||| || |||| ||||||    
T  10123097 ggttcgaaccccaaacaccccacttattcatctttaaggtgaatttctctagccactaggctactt 10123032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 12973373 - 12973257
Alignment:
Q  76 tgagtttaacttatttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctc 173  Q
    |||||||| || |||||||||||||||||||| || ||||||||||    || ||| ||  ||| | |||||||||||||  ||||||||| |||||||     
T  12973373 tgagtttagctcatttggtaagggataatgcacaatatatgcaggggccgagattcaaactcctgacaccccacttattcatctttaaggtaaatttctt 12973274  T
Q  174 taaccgctagactactt 190  Q
    || || |||||||||||    
T  12973273 tagccactagactactt 12973257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 193
Target Start/End: Complemental strand, 22853856 - 22853737
Alignment:
Q  76 tgagtttaacttatttggtaagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctc 173  Q
    |||| |||||| ||||| ||||||||||| ||||  ||||| ||||  | ||||||||| | | || ||  ||||||||||| |||||| ||||||||||    
T  22853856 tgagcttaactcatttgataagggataatacatagaatatgtaggggctgaggttcgaacctcaaacacttcacttattctcttttaagatgaatttctc 22853757  T
Q  174 taaccgctagactacttaac 193  Q
    ||  ||||| ||||||||||    
T  22853756 tagacgctatactacttaac 22853737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 24253666 - 24253622
Alignment:
Q  146 acttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||    
T  24253666 acttattcgcctttaagatgaatttctctaaccgttagactactt 24253622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 27160494 - 27160553
Alignment:
Q  75 gtgagtttaacttatttggtaagggataatgcataacatatgcaggg--taaggttcgaa 132  Q
    ||||||||| || |||| |||||||||||||||||| ||||||||||  |||||||||||    
T  27160494 gtgagtttagctcatttagtaagggataatgcataatatatgcaggggctaaggttcgaa 27160553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 190
Target Start/End: Original strand, 8310668 - 8310769
Alignment:
Q  90 ttggtaagggataatgcataacatatgcagggt--aaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagacta 187  Q
    |||||||| ||||||| || | ||||||||||   | |||||||| |||  |||||||||| ||| | |||||||||||||||||| ||||||||| |||    
T  8310668 ttggtaagagataatgtattatatatgcaggggtcagggttcgaaccccggataccccact-attttactttaaggtgaatttctccaaccgctaggcta 8310766  T
Q  188 ctt 190  Q
    |||    
T  8310767 ctt 8310769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 50302934 - 50302830
Alignment:
Q  88 atttggtaagggataatgcataacatatgcaggg---taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctaga 184  Q
    ||||||||||||||||||||||| || ||||| |   |  |||||||| |||| | || | ||||||||  |||||||||||||||||||| || |||||    
T  50302934 atttggtaagggataatgcataatatgtgcagagggctggggttcgaa-ccctgacactctacttattcatctttaaggtgaatttctctagccactaga 50302836  T
Q  185 ctactt 190  Q
    ||||||    
T  50302835 ctactt 50302830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 8893911 - 8893969
Alignment:
Q  125 ggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctag 183  Q
    |||||||| ||| || |||||||||||||  |||||||||||||||||| |||| ||||    
T  8893911 ggttcgaaccccaaacaccccacttattcatctttaaggtgaatttctccaaccactag 8893969  T

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Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 190
Target Start/End: Complemental strand, 42946543 - 42946446
Alignment:
Q  95 aagggataatgcataacatatgcaggg--taaggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||||  ||||||||||  |  |||| ||| |||  | ||||||||||||| |||| |||||||||||||||| ||| ||| ||||||    
T  42946543 aagggataatgcatattatatgcaggggctggggtttgaaccccggacaccccacttattcaccttaaaggtgaatttctctagccgttaggctactt 42946446  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 22779274 - 22779339
Alignment:
Q  125 ggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||| ||| || ||||||||||||| |||||||  |||||||||||| ||  ||||||||||    
T  22779274 ggttcgaaccccaaacaccccacttattcacctttaaaatgaatttctctagccaatagactactt 22779339  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 27980168 - 27980127
Alignment:
Q  134 ccctaataccccacttattctcctttaaggtgaatttctcta 175  Q
    |||||| ||||||||||||| |||||||||| ||||||||||    
T  27980168 ccctaacaccccacttattcacctttaaggtaaatttctcta 27980127  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 41618804 - 41618739
Alignment:
Q  125 ggttcgaaaccctaataccccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||| ||| || ||| || |||||| | ||||||||||||||||||| |||| |||||||||    
T  41618804 ggttcgaatcccgaacacctcagttattcacatttaaggtgaatttctctagccgccagactactt 41618739  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 46532523 - 46532482
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgcta 182  Q
    ||||||||  ||| ||||||||||||||||||||||||||||    
T  46532523 accccactatttcacctttaaggtgaatttctctaaccgcta 46532482  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 49895802 - 49895839
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaacc 178  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  49895802 accccacttattcacctttaagatgaatttctctaacc 49895839  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 52720755 - 52720800
Alignment:
Q  145 cacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||  |||||| |||||||||||||||| |||||||||||    
T  52720755 cacttattcatctttaaagtgaatttctctaaccactagactactt 52720800  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 63889 - 63841
Alignment:
Q  143 cccacttattc-tcctttaaggtgaatttctctaaccgctagactactt 190  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  63889 cccacttattcattctttaaggtgaatttctctaaccactagactactt 63841  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 419779 - 419828
Alignment:
Q  141 accccacttattctcctttaaggtgaatttctctaaccgctagactactt 190  Q
    |||||||||||||  |||||||||||||||||||| || |||| ||||||    
T  419779 accccacttattcatctttaaggtgaatttctctagccactaggctactt 419828  T

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