View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17901_low_8 (Length: 468)

Name: NF17901_low_8
Description: NF17901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17901_low_8
NF17901_low_8
[»] chr6 (27 HSPs)
chr6 (11-295)||(2908412-2908695)
chr6 (294-403)||(2908775-2908884)
chr6 (102-189)||(17758068-17758154)
chr6 (98-163)||(186755-186820)
chr6 (102-185)||(603129-603211)
chr6 (102-185)||(2972980-2973062)
chr6 (102-185)||(5043672-5043754)
chr6 (102-185)||(21588976-21589058)
chr6 (102-185)||(21593709-21593791)
chr6 (102-185)||(25073613-25073696)
chr6 (102-185)||(26954327-26954409)
chr6 (106-185)||(9183072-9183150)
chr6 (102-185)||(26830164-26830246)
chr6 (131-185)||(5406241-5406294)
chr6 (131-185)||(5409110-5409163)
chr6 (131-185)||(5410566-5410619)
chr6 (131-185)||(5413435-5413488)
chr6 (131-185)||(31404716-31404769)
chr6 (127-185)||(33160393-33160450)
chr6 (132-185)||(3808749-3808801)
chr6 (102-182)||(4045468-4045548)
chr6 (102-185)||(17763035-17763117)
chr6 (102-185)||(28137449-28137531)
chr6 (421-451)||(2908880-2908910)
chr6 (133-185)||(2171573-2171624)
chr6 (149-185)||(16569113-16569149)
chr6 (102-185)||(26800632-26800714)
[»] chr1 (58 HSPs)
chr1 (98-185)||(6808493-6808580)
chr1 (102-185)||(42298016-42298098)
chr1 (102-184)||(2263016-2263098)
chr1 (102-185)||(10925268-10925353)
chr1 (98-185)||(9109460-9109547)
chr1 (102-185)||(31925748-31925830)
chr1 (102-185)||(47255381-47255463)
chr1 (103-185)||(193657-193738)
chr1 (105-185)||(3156913-3156992)
chr1 (105-185)||(3189378-3189457)
chr1 (105-185)||(3198195-3198274)
chr1 (105-185)||(3207034-3207113)
chr1 (102-182)||(22079361-22079441)
chr1 (105-185)||(23555306-23555385)
chr1 (105-185)||(28220267-28220346)
chr1 (105-185)||(28223462-28223541)
chr1 (105-185)||(49918398-49918477)
chr1 (102-185)||(8550828-8550910)
chr1 (102-185)||(11348743-11348825)
chr1 (102-185)||(13547130-13547212)
chr1 (102-185)||(16455666-16455748)
chr1 (102-185)||(19754540-19754622)
chr1 (102-185)||(28265595-28265677)
chr1 (102-185)||(29136292-29136374)
chr1 (102-185)||(31659283-31659365)
chr1 (107-170)||(32471510-32471573)
chr1 (102-185)||(50169251-50169333)
chr1 (127-185)||(1833592-1833649)
chr1 (100-166)||(25652129-25652195)
chr1 (98-166)||(16914234-16914303)
chr1 (132-185)||(37168373-37168425)
chr1 (102-182)||(3460741-3460821)
chr1 (133-185)||(13549041-13549092)
chr1 (105-185)||(30476487-30476566)
chr1 (149-185)||(36683771-36683807)
chr1 (105-185)||(44455208-44455287)
chr1 (102-182)||(45644398-45644477)
chr1 (133-185)||(50167216-50167267)
chr1 (98-165)||(4535541-4535608)
chr1 (102-185)||(4552678-4552760)
chr1 (102-185)||(13138017-13138099)
chr1 (102-185)||(15820352-15820434)
chr1 (102-185)||(19752731-19752813)
chr1 (131-190)||(20762746-20762804)
chr1 (102-185)||(37282732-37282815)
chr1 (134-185)||(37503598-37503648)
chr1 (130-185)||(44650203-44650258)
chr1 (102-185)||(46064963-46065045)
chr1 (103-185)||(13659377-13659458)
chr1 (102-171)||(196963-197031)
chr1 (144-185)||(5459992-5460033)
chr1 (132-185)||(7482271-7482323)
chr1 (132-185)||(34603652-34603704)
chr1 (132-185)||(47115247-47115299)
chr1 (102-170)||(928032-928099)
chr1 (132-188)||(13938212-13938268)
chr1 (133-185)||(37876807-37876858)
chr1 (102-182)||(41360959-41361038)
[»] chr3 (46 HSPs)
chr3 (106-188)||(35138743-35138825)
chr3 (105-185)||(7762313-7762392)
chr3 (102-185)||(34491257-34491339)
chr3 (102-185)||(4569997-4570079)
chr3 (102-185)||(54593749-54593831)
chr3 (131-185)||(37408532-37408585)
chr3 (98-163)||(20937697-20937762)
chr3 (105-185)||(7764512-7764591)
chr3 (105-185)||(29810916-29810995)
chr3 (129-188)||(4055801-4055860)
chr3 (102-185)||(29196427-29196509)
chr3 (102-185)||(30236170-30236252)
chr3 (102-185)||(32891149-32891231)
chr3 (102-185)||(40735428-40735510)
chr3 (102-185)||(46173402-46173484)
chr3 (127-178)||(54739001-54739052)
chr3 (131-185)||(19683930-19683983)
chr3 (131-185)||(45095237-45095290)
chr3 (102-184)||(46860519-46860600)
chr3 (105-171)||(51398862-51398927)
chr3 (133-185)||(6095640-6095691)
chr3 (102-185)||(43401842-43401925)
chr3 (102-185)||(49199510-49199593)
chr3 (102-185)||(760892-760974)
chr3 (102-185)||(9581327-9581409)
chr3 (102-185)||(22835043-22835125)
chr3 (102-185)||(40734543-40734625)
chr3 (102-185)||(44331590-44331672)
chr3 (102-185)||(53921544-53921626)
chr3 (105-163)||(2020187-2020245)
chr3 (103-185)||(16499075-16499156)
chr3 (100-166)||(25491027-25491093)
chr3 (102-184)||(32744478-32744559)
chr3 (127-185)||(40913363-40913420)
chr3 (131-173)||(54744302-54744344)
chr3 (144-185)||(33191917-33191958)
chr3 (132-165)||(40519258-40519291)
chr3 (98-170)||(1313860-1313932)
chr3 (98-166)||(8166516-8166584)
chr3 (98-166)||(24635298-24635366)
chr3 (149-185)||(29682450-29682486)
chr3 (105-185)||(29813111-29813190)
chr3 (102-185)||(36018897-36018979)
chr3 (133-185)||(44700519-44700570)
chr3 (149-185)||(47304342-47304378)
chr3 (133-185)||(55302013-55302064)
[»] chr8 (33 HSPs)
chr8 (100-185)||(11712041-11712126)
chr8 (98-185)||(7597655-7597742)
chr8 (102-189)||(4283569-4283655)
chr8 (102-185)||(42435032-42435114)
chr8 (102-185)||(1292504-1292586)
chr8 (102-185)||(3303711-3303793)
chr8 (102-185)||(27811323-27811405)
chr8 (102-185)||(30143385-30143467)
chr8 (105-185)||(42498242-42498321)
chr8 (105-185)||(44353841-44353920)
chr8 (102-185)||(18655445-18655527)
chr8 (131-185)||(34256548-34256601)
chr8 (100-185)||(4162540-4162623)
chr8 (132-185)||(40328855-40328907)
chr8 (102-162)||(3231859-3231919)
chr8 (133-185)||(5689347-5689398)
chr8 (105-185)||(12702675-12702754)
chr8 (105-185)||(15212834-15212913)
chr8 (133-185)||(33352226-33352277)
chr8 (102-185)||(4731703-4731785)
chr8 (102-185)||(18141865-18141947)
chr8 (102-185)||(30291652-30291734)
chr8 (102-185)||(40221790-40221872)
chr8 (102-185)||(40321125-40321207)
chr8 (135-185)||(1345412-1345461)
chr8 (127-185)||(8153828-8153885)
chr8 (107-185)||(32902214-32902292)
chr8 (131-185)||(34254372-34254425)
chr8 (148-189)||(38863948-38863989)
chr8 (149-185)||(4743255-4743291)
chr8 (106-166)||(8965751-8965810)
chr8 (102-182)||(19491743-19491822)
chr8 (133-185)||(43036499-43036550)
[»] chr4 (53 HSPs)
chr4 (102-185)||(26699483-26699566)
chr4 (98-185)||(33089919-33090006)
chr4 (98-188)||(22882788-22882878)
chr4 (98-188)||(22934452-22934542)
chr4 (102-185)||(12073437-12073519)
chr4 (102-185)||(50673888-50673970)
chr4 (100-185)||(8665451-8665535)
chr4 (109-214)||(12119591-12119696)
chr4 (105-185)||(6656004-6656083)
chr4 (105-185)||(56178678-56178757)
chr4 (102-185)||(27417006-27417088)
chr4 (99-214)||(34112859-34112973)
chr4 (102-185)||(46147432-46147514)
chr4 (102-185)||(48893679-48893761)
chr4 (103-185)||(4588005-4588086)
chr4 (98-187)||(6677510-6677599)
chr4 (105-185)||(9927499-9927578)
chr4 (105-185)||(26364284-26364363)
chr4 (106-182)||(35662490-35662565)
chr4 (105-185)||(37740673-37740752)
chr4 (102-185)||(5429724-5429806)
chr4 (106-185)||(8648188-8648266)
chr4 (102-185)||(26175677-26175759)
chr4 (98-153)||(34788847-34788902)
chr4 (102-185)||(36994569-36994651)
chr4 (102-185)||(40632490-40632572)
chr4 (102-185)||(54883065-54883147)
chr4 (102-184)||(24969157-24969238)
chr4 (98-164)||(44570427-44570493)
chr4 (102-184)||(50262743-50262824)
chr4 (103-184)||(21703877-21703958)
chr4 (100-185)||(33989887-33989972)
chr4 (102-185)||(2209758-2209841)
chr4 (133-185)||(12743966-12744017)
chr4 (133-185)||(12744088-12744139)
chr4 (133-185)||(12745355-12745406)
chr4 (133-185)||(12745477-12745528)
chr4 (98-162)||(32091519-32091583)
chr4 (105-185)||(34570455-34570534)
chr4 (105-185)||(48143091-48143170)
chr4 (102-185)||(379425-379507)
chr4 (106-185)||(3913497-3913575)
chr4 (102-185)||(29254539-29254621)
chr4 (106-185)||(31474200-31474278)
chr4 (102-185)||(36463430-36463512)
chr4 (102-185)||(45687223-45687305)
chr4 (131-185)||(6542220-6542273)
chr4 (127-185)||(13992334-13992390)
chr4 (127-185)||(29999847-29999905)
chr4 (98-168)||(22628950-22629022)
chr4 (132-185)||(41964491-41964543)
chr4 (132-185)||(46703576-46703628)
chr4 (112-185)||(51337119-51337191)
[»] chr2 (32 HSPs)
chr2 (102-185)||(24398102-24398185)
chr2 (103-185)||(17057410-17057491)
chr2 (103-185)||(17085393-17085474)
chr2 (102-185)||(17490189-17490271)
chr2 (105-185)||(2334459-2334538)
chr2 (102-185)||(13121814-13121894)
chr2 (98-166)||(42261545-42261613)
chr2 (102-185)||(1631773-1631855)
chr2 (102-185)||(33648216-33648299)
chr2 (102-185)||(36773607-36773689)
chr2 (103-185)||(7815314-7815395)
chr2 (127-185)||(36988117-36988174)
chr2 (102-185)||(11049598-11049681)
chr2 (100-175)||(34811272-34811347)
chr2 (102-185)||(36318050-36318132)
chr2 (102-185)||(45726974-45727056)
chr2 (100-166)||(41454277-41454343)
chr2 (132-185)||(5723297-5723349)
chr2 (98-183)||(30218087-30218172)
chr2 (105-185)||(6595047-6595126)
chr2 (105-185)||(7451166-7451245)
chr2 (102-185)||(723785-723867)
chr2 (127-185)||(4503174-4503230)
chr2 (102-185)||(33162491-33162573)
chr2 (127-185)||(45099825-45099881)
chr2 (108-170)||(3897041-3897103)
chr2 (103-185)||(42019911-42019995)
chr2 (133-185)||(11067381-11067432)
chr2 (133-185)||(29867945-29867996)
chr2 (149-185)||(34139811-34139847)
chr2 (133-185)||(35446925-35446976)
chr2 (133-185)||(38312316-38312367)
[»] scaffold0219 (1 HSPs)
scaffold0219 (101-185)||(27483-27567)
[»] chr5 (38 HSPs)
chr5 (105-185)||(13239799-13239878)
chr5 (102-185)||(40147306-40147388)
chr5 (98-169)||(316803-316874)
chr5 (102-185)||(533814-533896)
chr5 (102-185)||(28278361-28278443)
chr5 (102-185)||(33831725-33831807)
chr5 (127-185)||(37439211-37439268)
chr5 (101-182)||(10054860-10054940)
chr5 (105-185)||(13488251-13488330)
chr5 (102-170)||(13695746-13695814)
chr5 (102-170)||(42309991-42310058)
chr5 (105-185)||(42428471-42428550)
chr5 (125-185)||(42926959-42927018)
chr5 (102-185)||(213510-213592)
chr5 (102-185)||(538070-538152)
chr5 (98-185)||(33906071-33906158)
chr5 (106-185)||(42426276-42426354)
chr5 (131-185)||(25412834-25412887)
chr5 (133-185)||(5058121-5058172)
chr5 (102-182)||(9049386-9049465)
chr5 (98-166)||(35616210-35616278)
chr5 (105-185)||(39468590-39468669)
chr5 (102-185)||(16452125-16452207)
chr5 (100-163)||(32609578-32609641)
chr5 (127-185)||(36074084-36074140)
chr5 (102-185)||(38747050-38747132)
chr5 (127-185)||(9789265-9789323)
chr5 (127-185)||(16409544-16409602)
chr5 (127-185)||(18441689-18441747)
chr5 (127-185)||(26177951-26178009)
chr5 (101-170)||(3325957-3326026)
chr5 (102-185)||(16640981-16641060)
chr5 (105-185)||(30682963-30683044)
chr5 (129-166)||(32583342-32583379)
chr5 (149-185)||(8565987-8566023)
chr5 (133-185)||(27015599-27015650)
chr5 (149-185)||(28750696-28750732)
chr5 (133-185)||(32636900-32636951)
[»] chr7 (47 HSPs)
chr7 (102-185)||(23565102-23565184)
chr7 (102-183)||(29608782-29608862)
chr7 (102-185)||(1113702-1113784)
chr7 (102-185)||(2361013-2361095)
chr7 (106-185)||(5116653-5116732)
chr7 (102-185)||(19502223-19502305)
chr7 (102-185)||(26417361-26417443)
chr7 (102-185)||(32358095-32358177)
chr7 (106-183)||(36574558-36574635)
chr7 (105-185)||(2759238-2759317)
chr7 (149-185)||(4510589-4510625)
chr7 (149-185)||(4512431-4512467)
chr7 (105-185)||(4586209-4586288)
chr7 (105-185)||(23555088-23555167)
chr7 (105-185)||(27347865-27347944)
chr7 (105-185)||(47673984-47674063)
chr7 (105-185)||(48491627-48491706)
chr7 (102-185)||(496024-496106)
chr7 (102-185)||(3259040-3259122)
chr7 (102-185)||(6359993-6360075)
chr7 (102-185)||(6432016-6432098)
chr7 (102-185)||(22270018-22270100)
chr7 (102-185)||(22328431-22328514)
chr7 (102-185)||(48599375-48599457)
chr7 (132-185)||(8359357-8359409)
chr7 (102-183)||(30024775-30024855)
chr7 (133-185)||(14069874-14069925)
chr7 (133-185)||(14379902-14379953)
chr7 (133-185)||(18126720-18126771)
chr7 (133-185)||(24525543-24525594)
chr7 (102-185)||(4253569-4253652)
chr7 (102-185)||(4508747-4508829)
chr7 (102-185)||(31733010-31733092)
chr7 (106-185)||(34310757-34310835)
chr7 (98-166)||(43363531-43363601)
chr7 (127-185)||(8153412-8153469)
chr7 (127-185)||(31518972-31519029)
chr7 (131-185)||(35853988-35854041)
chr7 (102-184)||(38671264-38671345)
chr7 (127-185)||(39731438-39731496)
chr7 (132-185)||(18396392-18396445)
chr7 (109-166)||(27073868-27073925)
chr7 (109-166)||(27204388-27204445)
chr7 (133-185)||(36146449-36146500)
chr7 (149-185)||(41317475-41317511)
chr7 (149-185)||(41649052-41649088)
chr7 (133-185)||(43864320-43864371)
[»] scaffold0176 (1 HSPs)
scaffold0176 (102-185)||(18045-18126)
[»] scaffold0002 (2 HSPs)
scaffold0002 (98-166)||(490380-490448)
scaffold0002 (131-185)||(434607-434660)
[»] scaffold0466 (1 HSPs)
scaffold0466 (102-185)||(7372-7454)
[»] scaffold0053 (1 HSPs)
scaffold0053 (100-166)||(25096-25162)
[»] scaffold0016 (1 HSPs)
scaffold0016 (131-185)||(114676-114729)
[»] scaffold0236 (1 HSPs)
scaffold0236 (132-185)||(10564-10616)
[»] scaffold0286 (1 HSPs)
scaffold0286 (127-185)||(11627-11684)
[»] scaffold0006 (1 HSPs)
scaffold0006 (103-185)||(149138-149219)


Alignment Details
Target: chr6 (Bit Score: 237; Significance: 1e-131; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 295
Target Start/End: Original strand, 2908412 - 2908695
Alignment:
Q  11 cacagattcacaacctcgtcgctcgctatcaaacattttccgttgtcaatttaaatttgtctataggatgaattactggtagttttatggagagcttgtt 110  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2908412 cacaaattcgcaacctcgtcgctcgctatcaaacattttctgttgtcaatttaaatttgtctatagaatgaattactggtagttttatggagagcttgtt 2908511  T
Q  111 gaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctcccctaacgtctggtcattgttggac 210  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  2908512 gaagataattttttacaactcttttgtatcttattgtaaagaactcattgatagtggattgaagaaatcaatctcccctaacgtc-ggtcattgttggaa 2908610  T
Q  211 cgaaatgctaattgatgttcttcttttttctctattatctttatcttgtttactctttgattattgattgctattgatacttgca 295  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  2908611 cgaaatgctaattgatgttgttcttttttctctattatctttatcttgtttattctttgattattggttgctattgatacttgca 2908695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 294 - 403
Target Start/End: Original strand, 2908775 - 2908884
Alignment:
Q  294 caattaagagacatcctaataaacatgatattccagtctctaaaaagcaccatcatcacaatctgccttagcaaaccagccgtcatgaaaatgcatacat 393  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2908775 caattaagagacatcgtaataaacatgatattccagtctctaaaaagcaccatcatcacaatctgccttagcaaaccagccgtcatgaaaatgcatacat 2908874  T
Q  394 gatagaacca 403  Q
    ||||||||||    
T  2908875 gatagaacca 2908884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 17758068 - 17758154
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctcccct 189  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||||||    
T  17758068 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctcccct 17758154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 186755 - 186820
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgata 163  Q
    ||||||||||||||||| ||| |||||| | |||||||||||||| |||||||||| |||||||||    
T  186755 tggagagcttgttgaagttaaatttttatagctcttttgtatctctttgtaaagaattcattgata 186820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 603211 - 603129
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| |||||| |||||||||||||| |||||||||||||    
T  603211 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattggagaaatcaatctc 603129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 2973062 - 2972980
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  2973062 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 2972980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 5043672 - 5043754
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||| ||||| ||| |||||||||    
T  5043672 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtagattggagagatcaatctc 5043754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 21588976 - 21589058
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  21588976 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 21589058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 21593709 - 21593791
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  21593709 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 21593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 25073613 - 25073696
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||| || ||| ||  ||| ||||||||||||  ||||||||||||||||||||||||||  |||||||||||||    
T  25073613 gagcttgttaaagctattttattgtaacccttttgtatctctatgtaaagaactcattgatagtggattagagaaatcaatctc 25073696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 26954409 - 26954327
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| | |||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  26954409 gagcttgttgaagctaatttcttgtaactcatctgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 26954327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 9183150 - 9183072
Alignment:
Q  106 ttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  9183150 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 9183072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 26830246 - 26830164
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||  | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  26830246 gagcttgttgaagctaatttcttgtaatccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 26830164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 5406294 - 5406241
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  5406294 cttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 5406241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 5409163 - 5409110
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  5409163 cttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 5409110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 5410619 - 5410566
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  5410619 cttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 5410566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 5413488 - 5413435
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  5413488 cttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 5413435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 31404769 - 31404716
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  31404769 cttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 31404716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 33160450 - 33160393
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| |||||| |||||||||||| |||||||| ||| |||||||||    
T  33160450 aactcttttgtatctctttgtaa-gaactcattgatggtggattggagagatcaatctc 33160393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 3808801 - 3808749
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  3808801 ttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 3808749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 4045468 - 4045548
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaat 182  Q
    ||||||||||||| |||||| ||  ||   |||| |||||| ||||||| |||||||||||||||||||| ||| ||||||    
T  4045468 gagcttgttgaagctaatttcttgtaatcattttatatctctttgtaaataactcattgatagtggattggagagatcaat 4045548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 17763035 - 17763117
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||  ||| || ||||||||||||||||||||| ||  |||||||||    
T  17763035 gagcttgttgaagctaatttcttgtaactcatttgtatctttttggaa-gaactcattgatagtggattggagtgatcaatctc 17763117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 28137531 - 28137449
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||| |||||| ||  ||| | ||||||| || |||||| ||||||||||||||||||||| ||| |||||||||    
T  28137531 gagcttgtttaagctaatttcttgtaacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctc 28137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 421 - 451
Target Start/End: Original strand, 2908880 - 2908910
Alignment:
Q  421 aaccaattctaacaccaagaaatgtcaaaat 451  Q
    |||||||||||||||||||||||||||||||    
T  2908880 aaccaattctaacaccaagaaatgtcaaaat 2908910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 2171624 - 2171573
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| |||  ||||||||    
T  2171624 tttgtatctctttgtaa-gaactcattgatagtggattggagagttcaatctc 2171573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 16569113 - 16569149
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  16569113 aagaactcattgatagtggattggagagatcaatctc 16569149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 26800632 - 26800714
Alignment:
Q  102 gagcttgttgaagataattttttagaactc-ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||  ||||||||||| |||||| ||||||||| ||||||||||| ||| |||||||||    
T  26800632 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctc 26800714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 6808493 - 6808580
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||| ||| || ||  |||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||    
T  6808493 tggagagcttgttgaagctaacttcttgtaactcttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctc 6808580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 42298098 - 42298016
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  42298098 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattgaagagatcaatctc 42298016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 2263098 - 2263016
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatct 184  Q
    |||||||||||||||||||| ||  ||| ||||| |||||  |||||||||||| ||||||||||||||||||| ||||||||    
T  2263098 gagcttgttgaagataatttcttgtaacccttttatatctttttgtaaagaacttattgatagtggattgaagagatcaatct 2263016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 10925268 - 10925353
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaa--agaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| ||||||  |||| ||||||||||||||||| |||||||||||||    
T  10925268 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaagaattcattgatagtggattggagaaatcaatctc 10925353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 9109547 - 9109460
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||| |||||||||| |||||| ||  ||| |||||||||||| ||||||||||| | ||||||||| |||| ||| |||||||||    
T  9109547 tggagaacttgttgaagttaatttcttgtaacccttttgtatctctttgtaaagaacacgttgatagtgtattggagagatcaatctc 9109460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 31925830 - 31925748
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  31925830 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 31925748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 47255463 - 47255381
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  47255463 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 47255381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 193657 - 193738
Alignment:
Q  103 agcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||  ||||| |||||||||| ||||||  |||||||||||||||||||| ||| |||||||||    
T  193657 agcttgttgaagctaatttcttgtaactcatttgtatctctttgtaat-aactcattgatagtggattggagagatcaatctc 193738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 3156913 - 3156992
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  3156913 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 3156992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 3189378 - 3189457
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| ||||||  |  |||||||||||||||  |||||| ||||||||||||||||||||| ||| |||||||||    
T  3189378 cttgttgaagctaatttcctgtaactcttttgtatctttttgtaa-gaactcattgatagtggattggagagatcaatctc 3189457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 3198195 - 3198274
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| ||||||  |  |||||||||||||||  |||||| ||||||||||||||||||||| ||| |||||||||    
T  3198195 cttgttgaagctaatttcctgtaactcttttgtatctttttgtaa-gaactcattgatagtggattggagagatcaatctc 3198274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 3207034 - 3207113
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| ||||||  |  |||||||||||||||  |||||| ||||||||||||||||||||| ||| |||||||||    
T  3207034 cttgttgaagctaatttcctgtaactcttttgtatctttttgtaa-gaactcattgatagtggattggagagatcaatctc 3207113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 22079361 - 22079441
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaat 182  Q
    ||||||||| ||| |||||| ||  |||  ||||||||||| |||||||||||||||||||| ||||||| ||| ||||||    
T  22079361 gagcttgttaaagctaatttcttgtaaccattttgtatctctttgtaaagaactcattgatattggattggagagatcaat 22079441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 23555385 - 23555306
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||  |||||| ||| ||||| |||||||||| |||||| ||||||||||||||||||||| |||  ||||||||    
T  23555385 cttgttgaaactaatttcttataactcatttgtatctctttgtaa-gaactcattgatagtggattggagagttcaatctc 23555306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 28220346 - 28220267
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  28220346 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 28220267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 28223541 - 28223462
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  28223541 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 28223462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 49918398 - 49918477
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  49918398 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 49918477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 8550910 - 8550828
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||| |||||| ||  ||||| |||||||| | |||||| ||||||||||||||||||||| ||| |||||||||    
T  8550910 gagcttgtttaagctaatttcttgtaactcatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctc 8550828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 11348743 - 11348825
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| || ||| ||||||||||||||||||||| ||| |||||||||    
T  11348743 gagcttgttgaagctaatttcttgtaacccatttgtatctctttctaa-gaactcattgatagtggattggagagatcaatctc 11348825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 13547212 - 13547130
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| || ||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  13547212 gagcttgttgaagctattttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 13547130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 16455666 - 16455748
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | ||||||||||  ||||| ||||||||||||||||||||| ||| |||||||||    
T  16455666 gagcttgttgaagctaatttcttgtaacccatttgtatctctgtgtaa-gaactcattgatagtggattggagagatcaatctc 16455748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 19754540 - 19754622
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  |||   |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  19754540 gagcttgttgaagctaatttcttgtaaccgatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 19754622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 28265677 - 28265595
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  28265677 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctc 28265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 29136292 - 29136374
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| || |||| | ||||||| || |||||| |||||||||||| |||||||| ||| |||||||||    
T  29136292 gagcttgttgaagctaatttcttggaacccatttgtatttctttgtaa-gaactcattgatcgtggattggagagatcaatctc 29136374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 31659283 - 31659365
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||| ||||||||||||||| ||| |||||||||    
T  31659283 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaacttattgatagtggattggagagatcaatctc 31659365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 32471510 - 32471573
Alignment:
Q  107 tgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggatt 170  Q
    |||||||| |||||| ||  |||||||||||||||| ||||||  |||||||||||||||||||    
T  32471510 tgttgaagttaatttattgcaactcttttgtatctctttgtaagaaactcattgatagtggatt 32471573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 50169333 - 50169251
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||  ||| |||||| ||  ||||| |||||||||| |||||| | ||||||||||||||||||||||| |||||||||    
T  50169333 gagcttgtcaaagctaatttcttgtaactcatttgtatctctttgtaa-gtactcattgatagtggattgaagagatcaatctc 50169251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 1833592 - 1833649
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  1833592 aactcatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 1833649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 25652129 - 25652195
Alignment:
Q  100 gagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    ||||| ||||||||| |||||| ||  |||||| ||||||||| ||||||||||||| |||||||||    
T  25652129 gagagtttgttgaagctaatttcttgtaactctcttgtatctctttgtaaagaactctttgatagtg 25652195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 16914303 - 16914234
Alignment:
Q  98 tggagagcttgttgaagataatttt-ttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    |||||||| |||||||| ||| ||| ||  ||| |||||||||||| |||||||||||||||||||||||    
T  16914303 tggagagcctgttgaagctaagtttcttctaacccttttgtatctctttgtaaagaactcattgatagtg 16914234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 37168373 - 37168425
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  37168373 ttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 37168425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 3460741 - 3460821
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaat 182  Q
    ||||||||||||| |||||| ||  ||| ||||||||| || |||||||||||  ||||||||| ||||| ||| ||||||    
T  3460741 gagcttgttgaagctaatttattgtaacccttttgtatatctttgtaaagaacatattgatagtcgattggagagatcaat 3460821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 13549092 - 13549041
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  13549092 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 13549041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 30476566 - 30476487
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||| ||  ||| | |||||||||| |||||| ||||||||||||| ||||||| | | |||||||||    
T  30476566 cttgttgaagataatttattgtaacccatttgtatctctttgtaa-gaactcattgatactggattggacagatcaatctc 30476487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 36683771 - 36683807
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||||||||| |||||||||||||    
T  36683771 aagaactcattgatagtggattgtagaaatcaatctc 36683807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 44455208 - 44455287
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||  |||||| ||  ||||| |||||||||  |||||| ||||||||||||||||||||| ||| |||||||||    
T  44455208 cttgttgaaactaatttcttgtaactcatttgtatctttttgtaa-gaactcattgatagtggattggagagatcaatctc 44455287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 45644477 - 45644398
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaat 182  Q
    ||||||||  ||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||| ||| ||||||    
T  45644477 gagcttgtcaaagctaatttcttgcaactcatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaat 45644398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 50167267 - 50167216
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| ||||||| |||||||||||||||||||| ||| |||||||||    
T  50167267 tttgtatctctttgtaaa-aactcattgatagtggattggagagatcaatctc 50167216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 4535608 - 4535541
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagt 165  Q
    |||||||||| ||||||  ||||| ||  |||  ||||||||||| ||||||||||||||||||||||    
T  4535608 tggagagcttattgaagtcaatttcttgtaacatttttgtatctctttgtaaagaactcattgatagt 4535541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 4552760 - 4552678
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||| | |||||| ||||||||||||| ||||||| ||| |||||||||    
T  4552760 gagcttgttgaagctaatttcttgtaacccctttgtatccctttgtaa-gaactcattgataatggattggagagatcaatctc 4552678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 13138099 - 13138017
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||| ||||| |||||| |||| |||||||||||||||||||| | |||||||    
T  13138099 gagcttgttgaagctaatttcttgtaacccatttgcatctctttgtaa-gaacacattgatagtggattgaagagagcaatctc 13138017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 15820352 - 15820434
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| || ||| |||||||||||||||| |||||||| || ||||||    
T  15820352 gagcttgttgaagctaatttcttgtaacacatttgtatctctttttaa-gaactcattgatagtgcattgaagagataaatctc 15820434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 19752731 - 19752813
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  |||   |||||||||| |||||| |||||||||||||| |||||| ||| |||||||||    
T  19752731 gagcttgttgaagctaatttcttgtaaccgatttgtatctctttgtaa-gaactcattgatagaggattggagagatcaatctc 19752813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 20762746 - 20762804
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctccccta 190  Q
    |||||||||||| | |||| ||||||||||||||||||||| ||| ||||||||| ||||    
T  20762746 cttttgtatctcttcgtaa-gaactcattgatagtggattggagagatcaatctctccta 20762804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 37282815 - 37282732
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| |   ||| |||||| ||||| ||||||||||||||||  |||||||||| ||| || ||||||    
T  37282815 gagcttgttgaagctaatttatggtaacccttttgcatctctttgtaaagaactcattagtagtggattggagagataaatctc 37282732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 37503648 - 37503598
Alignment:
Q  134 ttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  37503648 ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 37503598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 44650258 - 44650203
Alignment:
Q  130 tcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||| |||||| ||||||| || ||||| ||||||||||||||| |||||||||    
T  44650258 tcttttatatctctttgtaaataattcattaatagtggattgaagagatcaatctc 44650203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 46064963 - 46065045
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||| ||||||| |||||| ||  ||||| | |||||||| |||||| ||||||||| ||||||||||| ||| |||||||||    
T  46064963 gagctcgttgaagctaatttcttgtaactcatgtgtatctctttgtaa-gaactcattcatagtggattggagagatcaatctc 46065045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 13659458 - 13659377
Alignment:
Q  103 agcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||   || | ||| |||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  13659458 agcttgttgaagctaatttcttgttacccatttatatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 13659377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 197031 - 196963
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattg 171  Q
    ||||||||| ||| |||||| ||  ||||| |||||||| | |||||| |||||||||||||||||||||    
T  197031 gagcttgtttaagttaatttcttgtaactcatttgtatccctttgtaa-gaactcattgatagtggattg 196963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 5459992 - 5460033
Alignment:
Q  144 ttgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||||||||| ||||| ||| |||||||||    
T  5459992 ttgtaaagaactcattgatagtagattggagagatcaatctc 5460033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 7482323 - 7482271
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||| |||||| |||||||||||||||| |||| ||| |||||||||    
T  7482323 ttttgtatctctttgtaa-gaactcattgatagtgaattggagagatcaatctc 7482271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 34603652 - 34603704
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||| |||||| |||||| |||||||||||| |||||||||||| |||||||||    
T  34603652 ttttttatctctttgtaa-gaactcattgatggtggattgaagagatcaatctc 34603704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 47115247 - 47115299
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||| ||||||| ||| |||||||||||||||| ||| |||||||||    
T  47115247 ttttgtatctctttgtaaa-aacccattgatagtggattggagagatcaatctc 47115299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 928099 - 928032
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggatt 170  Q
    ||||||||||||| |||||| ||  ||| |||||| ||||| ||||||| |||||||| ||||||||||    
T  928099 gagcttgttgaagctaatttcttgtaacccttttggatctctttgtaaa-aactcattaatagtggatt 928032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 13938212 - 13938268
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctcccc 188  Q
    ||||||||||| ||||||  |||||||||||||||||||| ||| |||  |||||||    
T  13938212 ttttgtatctctttgtaagaaactcattgatagtggattggagagatctctctcccc 13938268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 37876858 - 37876807
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| ||||||  |||||||||||||||||||| ||| |||||||||    
T  37876858 tttgtatctctttgtaat-aactcattgatagtggattgcagagatcaatctc 37876807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 41360959 - 41361038
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaat 182  Q
    ||||||||||||  |||||| ||  ||| | |||||||||| |||||| |||||| ||||||||||||| |||| ||||||    
T  41360959 gagcttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattaaagagatcaat 41361038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 5e-20; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 35138825 - 35138743
Alignment:
Q  106 ttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctcccc 188  Q
    ||||||||| |||||| ||  |||||||||||||||| |||||||||||||||||||||||||| ||||| | ||||||||||    
T  35138825 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatggaagagaacaatctcccc 35138743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 7762313 - 7762392
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  |||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  7762313 cttgttgaagctaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 7762392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 34491257 - 34491339
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  34491257 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 34491339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 4569997 - 4570079
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||| |||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  4569997 gagcttattgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 4570079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 54593749 - 54593831
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  54593749 gagcttgttgaagctaatttattgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 54593831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 37408532 - 37408585
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  37408532 cttttgtatctctttgtaa-gaactcattgatagtggattgaagagatcaatctc 37408585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 20937697 - 20937762
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgata 163  Q
    ||||||||||||||||| |||||| ||  ||| |||||||||||| ||| ||||||||||||||||    
T  20937697 tggagagcttgttgaagttaatttcttgtaacccttttgtatctctttgaaaagaactcattgata 20937762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 7764512 - 7764591
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||| ||| |||||| ||  |||||||||||||||| |||||| ||||||||||||||||||||| ||| || ||||||    
T  7764512 cttgttaaagctaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatgaatctc 7764591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 29810916 - 29810995
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  29810916 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 29810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 4055860 - 4055801
Alignment:
Q  129 ctcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctcccc 188  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||| |||  |||||||    
T  4055860 ctcttttgtatctctttgtaagaaactcattgatagtggattgaagagatctctctcccc 4055801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 29196509 - 29196427
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||  ||| |||||| || |||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  29196509 gagcttgtcaaagctaatttcttggaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 29196427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 30236170 - 30236252
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  |||   |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  30236170 gagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 30236252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 32891149 - 32891231
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||| |||||||| |||||||||||||| ||| || ||||||    
T  32891149 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcgttgatagtggattggagagataaatctc 32891231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 40735428 - 40735510
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  |||   |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  40735428 gagcttgttgaagctaatttattgtaaccagtttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 40735510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 46173402 - 46173484
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||| ||||||||||||||||| ||| |||||||||    
T  46173402 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaattcattgatagtggattggagagatcaatctc 46173484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 54739052 - 54739001
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaat 178  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||| ||||||    
T  54739052 aactcttttatatctctctgtaaagaactcattgatagtggattggagaaat 54739001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 19683983 - 19683930
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  19683983 cttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 19683930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 45095237 - 45095290
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  45095237 cttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 45095290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 46860519 - 46860600
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatct 184  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| ||||||  |||||||||||||||||||| ||| ||||||||    
T  46860519 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaat-aactcattgatagtggattggagagatcaatct 46860600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 51398862 - 51398927
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattg 171  Q
    |||||||||| |||||| ||  ||||| |||||||||| |||||| |||||||||||||||||||||    
T  51398862 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattg 51398927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 6095691 - 6095640
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  6095691 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 6095640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 43401925 - 43401842
Alignment:
Q  102 gagcttgttgaagataattttttagaactc-ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||| |||||| |||||| ||||||||||||||||||||| |||||| ||||||    
T  43401925 gagcttgttgaagctaatttcttgtaacgcattttttatctctttgtaa-gaactcattgatagtggattggagaaattaatctc 43401842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 49199593 - 49199510
Alignment:
Q  102 gagcttgttgaagataattttttagaactc-ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | ||||||||||| |||||| ||||||||||||||||||||| ||| || ||||||    
T  49199593 gagcttgttgaagctaatttcttgtaacccattttgtatctctttgtaa-gaactcattgatagtggattggagagattaatctc 49199510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 760892 - 760974
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||| |||||| ||  ||| | |||||||| | |||||| ||||||||||||||||||||| ||| |||||||||    
T  760892 gagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctc 760974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 9581327 - 9581409
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||| |||||| ||  ||| | |||||||| | |||||| ||||||||||||||||||||| ||| |||||||||    
T  9581327 gagcttgtttaagctaatttcttttaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctc 9581409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 22835125 - 22835043
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||| |||||| ||  ||| | |||||||| | |||||| ||||||||||||||||||||| ||| |||||||||    
T  22835125 gagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctc 22835043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 40734543 - 40734625
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||  |||||| ||  ||| | |||||||| | |||||| ||||||||||||||||||||| ||| |||||||||    
T  40734543 gagcttgttgaacctaatttcttgtaacacatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctc 40734625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 44331590 - 44331672
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||  | |||||||||| |||||| ||||| ||||||||||||||| ||| |||||||||    
T  44331590 gagcttgttgaagctaatttcttgtaagccatttgtatctctttgtaa-gaacttattgatagtggattggagagatcaatctc 44331672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 53921626 - 53921544
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||| |||||| ||  ||||| ||||||||   |||||| ||||||||||||||||||||| ||| |||||||||    
T  53921626 gagcttgttaaagctaatttcttgtaactcatttgtatcattttgtaa-gaactcattgatagtggattggagagatcaatctc 53921544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 2020187 - 2020245
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgata 163  Q
    |||||||||| |||||| ||| |||  |||||||| || ||||||||||||||||||||    
T  2020187 cttgttgaagctaatttcttataaccgttttgtatttctttgtaaagaactcattgata 2020245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 16499075 - 16499156
Alignment:
Q  103 agcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||   || | ||| |||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  16499075 agcttgttgaagctaatttcttgttacccatttatatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 16499156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 25491093 - 25491027
Alignment:
Q  100 gagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    ||||||||||||||| | |||| ||| |   |||||||||||| |||||||||| ||||||||||||    
T  25491093 gagagcttgttgaagctgatttcttatactccttttgtatctctttgtaaagaaatcattgatagtg 25491027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 32744559 - 32744478
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatct 184  Q
    ||||||||| ||| |||||| ||  ||||| |||||||| | |||||| |||||| |||||||||||||||||| || |||||    
T  32744559 gagcttgtttaagctaatttcttgtaactcatttgtatcactttgtaa-gaactctttgatagtggattgaagagataaatct 32744478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 40913363 - 40913420
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||| |||||||||| |||||| |||||||| |||||||||||| ||| |||||||||    
T  40913363 aactcatttgtatctctttgtaa-gaactcatcgatagtggattggagagatcaatctc 40913420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 54744344 - 54744302
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaa 173  Q
    |||||||||||| |||||||||||| | |||||||||||||||    
T  54744344 cttttgtatctctttgtaaagaacttactgatagtggattgaa 54744302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 33191917 - 33191958
Alignment:
Q  144 ttgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||||||||||||||  ||| |||||||||    
T  33191917 ttgtaaagaactcattgatagtggattagagagatcaatctc 33191958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 40519291 - 40519258
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagt 165  Q
    ||||||||||| ||||||||||||||||||||||    
T  40519291 ttttgtatctctttgtaaagaactcattgatagt 40519258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 1313932 - 1313860
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggatt 170  Q
    ||||||||||||| ||| |||||| ||  ||  ||||||||| || ||| |||||||||||||||| ||||||    
T  1313932 tggagagcttgttaaagctaatttcttgcaagccttttgtatatctttgaaaagaactcattgatattggatt 1313860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 8166584 - 8166516
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    ||||||| ||||||||| |||| | ||| |||  ||||||||||| ||||||||||||  |||||||||    
T  8166584 tggagagtttgttgaagttaatatcttataacctttttgtatctctttgtaaagaacttgttgatagtg 8166516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 24635298 - 24635366
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    ||||||| ||||||||| |||||||||  |||| ||||||||||| || |||  || ||||||||||||    
T  24635298 tggagagtttgttgaagctaattttttgtaactattttgtatctctttataatcaattcattgatagtg 24635366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 29682450 - 29682486
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  29682450 aagaactcattgatagtggattggagagatcaatctc 29682486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 29813111 - 29813190
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||| ||||| |||||| ||||||||| ||||||||||| ||| |||||||||    
T  29813111 cttgttgaagctaatttcttgtaacccatttgcatctctttgtaa-gaactcatttatagtggattggagagatcaatctc 29813190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 36018897 - 36018979
Alignment:
Q  102 gagcttgttgaagataattttttagaactc-ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| ||||||||||| |||| ||||||||||| ||||||||||| |||  ||||||||    
T  36018897 gagcttgttgaagttaatttcttgtaactcattttgtatctctttgt-aagaactcatt-atagtggattggagaggtcaatctc 36018979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 44700570 - 44700519
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  44700570 tttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctc 44700519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 47304342 - 47304378
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  47304342 aagaactcattgatagtggattggagagatcaatctc 47304378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 55302064 - 55302013
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||| ||||||||||||||||| ||| |||||||||    
T  55302064 tttgtatctctttgtaa-gaattcattgatagtggattggagagatcaatctc 55302013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 11712126 - 11712041
Alignment:
Q  100 gagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||| |||||| ||  ||| ||||| |||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  11712126 gagagcttgttgaagctaatttcttgaaacccttttatatctctttgtaaataactcattgatagtggattgaagagatcaatctc 11712041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 7597655 - 7597742
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||| |||||| ||| ||  |||||||||||| ||||||||||  |||||||||||||||| ||| |||||||||    
T  7597655 tggagagcttgttgaagctaatttcttataatccttttgtatctctttgtaaagaatgcattgatagtggattggagagatcaatctc 7597742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 4283569 - 4283655
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctcccct 189  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||||||    
T  4283569 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctcccct 4283655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 42435114 - 42435032
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  42435114 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagaaatcaatctc 42435032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 1292586 - 1292504
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||  |||||| ||||||    
T  1292586 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggatttgagaaataaatctc 1292504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 3303793 - 3303711
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||  |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  3303793 gagcttgtttaacctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattgaagagatcaatctc 3303711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 27811323 - 27811405
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| |||| |||||||||||||||||||| |||||||||    
T  27811323 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaacccattgatagtggattgaagagatcaatctc 27811405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 30143385 - 30143467
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  30143385 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 30143467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 42498242 - 42498321
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| ||||||||| || |||||| ||||||||||||||||||||| ||| |||||||||    
T  42498242 cttgttgaagctaatttcttgtaacccttttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctc 42498321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 44353841 - 44353920
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||||| | |||||||||    
T  44353841 cttgttgaagctaatttcttgtaacacatttgtatctctttgtaa-gaactcattgatagtggattgaaaagatcaatctc 44353920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 18655445 - 18655527
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||  ||| |||||||||    
T  18655445 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattagagagatcaatctc 18655527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 34256601 - 34256548
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  34256601 cttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 34256548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 4162540 - 4162623
Alignment:
Q  100 gagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||| |||||||||| |||||| ||  ||||| |||||||||| |||||| |||||||||||||| |||||| ||| |||||||||    
T  4162540 gagaacttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatag-ggattggagatatcaatctc 4162623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 40328855 - 40328907
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  40328855 ttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 40328907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 3231919 - 3231859
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgat 162  Q
    ||||||||||||| |||||||||  |||  ||||||||||| |||||||||||| ||||||    
T  3231919 gagcttgttgaagctaattttttttaaccattttgtatctctttgtaaagaacttattgat 3231859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 5689347 - 5689398
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  5689347 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 5689398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 12702754 - 12702675
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| ||||||| |||| |||||| ||||||||||||| ||||||| ||| |||||||||    
T  12702754 cttgttgaagctaatttcttgtaacccttttgtgtctctttgtaa-gaactcattgatattggattggagagatcaatctc 12702675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 15212834 - 15212913
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||| ||||||| ||| |||||||||    
T  15212834 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgataatggattggagagatcaatctc 15212913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 33352226 - 33352277
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  33352226 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 33352277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 4731703 - 4731785
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||  |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| ||| |||||    
T  4731703 gagcttgttgaacctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcgatctc 4731785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 18141865 - 18141947
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||| | |||||| |||||| |||||||||||||| ||| |||||||||    
T  18141865 gagcttgttgaagctaatttcttgtaacccatttgtatcactttgtaa-gaactctttgatagtggattggagagatcaatctc 18141947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 30291652 - 30291734
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||| | |||||| ||| || |||||||||||||| ||| |||||||||    
T  30291652 gagcttgttgaagctaatttcttgtaactcatttgtatcactttgtaa-gaattctttgatagtggattggagagatcaatctc 30291734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 40221790 - 40221872
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||  |||||| ||  ||| | |||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  40221790 gagcttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattggagagatcaatctc 40221872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 40321125 - 40321207
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | || ||||||| ||||||| ||||| |||||||||||||| ||| |||||||||    
T  40321125 gagcttgttgaagttaatttcttgtaacccattagtatctctttgtaaa-aactctttgatagtggattggagagatcaatctc 40321207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 1345461 - 1345412
Alignment:
Q  135 tgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||| ||| ||||||||||||||||||||||||||||  ||||||||    
T  1345461 tgtatctctttg-aaagaactcattgatagtggattgaagagttcaatctc 1345412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 8153828 - 8153885
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| || |||||| ||||||||||||||| ||||| ||| |||||||||    
T  8153828 aactcttttgtatatctttgtaa-gaactcattgatagttgattggagagatcaatctc 8153885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 32902292 - 32902214
Alignment:
Q  107 tgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||| |||||| ||  |||| ||||||||||| || ||||||| |||||||||||| |||  ||| |||||||||    
T  32902292 tgttgaagctaatttcttgtaacttttttgtatctctttctaaagaattcattgatagtgaatttgagagatcaatctc 32902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 34254425 - 34254372
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||| ||||||||||||||| ||| |||||||||    
T  34254425 cttttgtatctctttgtaa-gaacttattgatagtggattggagagatcaatctc 34254372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 38863948 - 38863989
Alignment:
Q  148 aaagaactcattgatagtggattgaagaaatcaatctcccct 189  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  38863948 aaagaactcgttgatagtggattggagagatcaatctcccct 38863989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 4743291 - 4743255
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  4743291 aagaactcattgatagtggattggagagatcaatctc 4743255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 8965810 - 8965751
Alignment:
Q  106 ttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    ||||||||| |||||| ||| ||| ||||| |||||| |||||| ||||||||||||||||    
T  8965810 ttgttgaagttaatttcttataacccttttatatctctttgtaa-gaactcattgatagtg 8965751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 19491822 - 19491743
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaat 182  Q
    ||||||||||||  |||||| ||  ||| | |||||||||| |||||| |||||| ||||||||||||| |||| ||||||    
T  19491822 gagcttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattaaagagatcaat 19491743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 43036499 - 43036550
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||  ||| |||||||||    
T  43036499 tttgtatctctttgtaa-gaactcattgatagtggatttgagagatcaatctc 43036550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 26699566 - 26699483
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  |||||||||||||||| |||||||||||||||| ||| ||||||| ||| |||||||||    
T  26699566 gagcttgttgaagctaatttcttgtaactcttttgtatctctttgtaaagaactcatttataatggattggagagatcaatctc 26699483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 33089919 - 33090006
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||| |||||| ||| |||  |||||||||||  ||||||||||||||||||||||||||  ||| |||||||||    
T  33089919 tggagagcttgttgaagctaatttattataaccattttgtatctctctgtaaagaactcattgatagtggattagagagatcaatctc 33090006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 22882878 - 22882788
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctcccc 188  Q
    ||||||| ||||||||| |||||| ||  ||| |||||||||||| | ||||||||||||||| |||||||||  ||||||||||||||||    
T  22882878 tggagagtttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaatctcccc 22882788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 22934542 - 22934452
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctcccc 188  Q
    ||||||| ||||||||| |||||| ||  ||| |||||||||||| | ||||||||||||||| |||||||||  ||||||||||||||||    
T  22934542 tggagagtttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaatctcccc 22934452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 12073437 - 12073519
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  12073437 gagcttgttgaagctaatttattgtaactcatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 12073519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 50673970 - 50673888
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  50673970 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 50673888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 8665451 - 8665535
Alignment:
Q  100 gagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  8665451 gagagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 8665535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 12119591 - 12119696
Alignment:
Q  109 ttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctcccctaacgtctggtcattgttgg 208  Q
    |||||| |||||| ||  ||| |||||||||||| |||||||||||||||| ||||||||||| ||| ||||||||| || ||     ||||||||||||    
T  12119591 ttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctctcccaagagtaggtcattgttgg 12119690  T
Q  209 accgaa 214  Q
    ||||||    
T  12119691 accgaa 12119696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 6656004 - 6656083
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  6656004 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 6656083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 56178757 - 56178678
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| |||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  56178757 cttgttgaagctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 56178678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 27417088 - 27417006
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| ||||||| |||||||||||||||||||| ||| |||||||||    
T  27417088 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaaa-aactcattgatagtggattggagagatcaatctc 27417006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 34112859 - 34112973
Alignment:
Q  99 ggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctcccctaacgtctgg 198  Q
    |||||||||||||||| ||||||  |  ||| |||||| ||||| ||||||||||||||||||||||| | || ||| |||  |||||||||  ||  ||    
T  34112859 ggagagcttgttgaagctaatttcatgtaacccttttgcatctctttgtaaagaactcattgatagtgaagtggagagatctctctcccctatagt-agg 34112957  T
Q  199 tcattgttggaccgaa 214  Q
    ||||||||||||||||    
T  34112958 tcattgttggaccgaa 34112973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 46147514 - 46147432
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  46147514 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactctttgatagtggattggagacatcaatctc 46147432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 48893761 - 48893679
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  48893761 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctc 48893679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 4588005 - 4588086
Alignment:
Q  103 agcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||  ||| |||||||||||| |||||| ||||||||||||||||||||| ||| | |||||||    
T  4588005 agcttgttgaagctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagaacaatctc 4588086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 6677510 - 6677599
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctccc 187  Q
    ||||||||||||||||| |||||| ||  ||| ||||||||| || |||||||||| || |||||| ||||||  ||| |||||||||||    
T  6677510 tggagagcttgttgaagctaatttcttgtaacccttttgtatatctttgtaaagaagtctttgataatggatttgagagatcaatctccc 6677599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 9927578 - 9927499
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  9927578 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 9927499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 26364284 - 26364363
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||| ||||||||||| ||| |||||||||    
T  26364284 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattaatagtggattggagagatcaatctc 26364363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 35662490 - 35662565
Alignment:
Q  106 ttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaat 182  Q
    ||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||| ||| ||||||    
T  35662490 ttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaat 35662565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 37740673 - 37740752
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  37740673 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 37740752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 5429724 - 5429806
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||  |||||| ||||||||||||||||||||| ||| |||||||||    
T  5429724 gagcttgttgaagctaatttcttgtaacccatttgtatctatttgtaa-gaactcattgatagtggattggagagatcaatctc 5429806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 8648188 - 8648266
Alignment:
Q  106 ttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| |||||| ||| ||| | |||||||||| |||||| ||||||||||||| ||||||| ||| |||||||||    
T  8648188 ttgttgaagctaatttcttataacccatttgtatctctttgtaa-gaactcattgatattggattggagagatcaatctc 8648266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 26175759 - 26175677
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||  |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  26175759 gagcttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 26175677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 153
Target Start/End: Complemental strand, 34788902 - 34788847
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaa 153  Q
    ||||||||||||||||| |||||| ||  |||||||||||||||| ||||||||||    
T  34788902 tggagagcttgttgaagttaatttcttgtaactcttttgtatctctttgtaaagaa 34788847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 36994569 - 36994651
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||| | |||||| ||||||||||||||||||||| ||| |||||||||    
T  36994569 gagcttgttgaagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctc 36994651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 40632490 - 40632572
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  |||   |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  40632490 gagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 40632572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 54883065 - 54883147
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||  |||||||||    
T  54883065 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagggatcaatctc 54883147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 24969157 - 24969238
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatct 184  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||| ||||||| ||||||||||||||| ||| || |||||    
T  24969157 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactaattgatagtggattggagagataaatct 24969238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 44570493 - 44570427
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatag 164  Q
    ||||||||||||||||  |||||| ||  |||  ||||||||||| |||||||||||||||||||||    
T  44570493 tggagagcttgttgaaactaatttcttgtaacatttttgtatctctttgtaaagaactcattgatag 44570427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 50262824 - 50262743
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatct 184  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||| ||||| ||| ||||||||    
T  50262824 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagttgattggagatatcaatct 50262743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 21703958 - 21703877
Alignment:
Q  103 agcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatct 184  Q
    |||||||||||||| |||| ||  | |  ||||||||||  |||||||||||||||||| ||||||||| ||| ||||||||    
T  21703958 agcttgttgaagatgatttcttgtaccctttttgtatctttttgtaaagaactcattgacagtggattggagatatcaatct 21703877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 33989887 - 33989972
Alignment:
Q  100 gagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||| ||||||||| |||||| ||  ||  |||||||||||| ||||||| ||||| || ||||||||||| ||| |||||||||    
T  33989887 gagagtttgttgaagctaatttcttgtaatccttttgtatctctttgtaaataactcgttaatagtggattggagagatcaatctc 33989972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 2209758 - 2209841
Alignment:
Q  102 gagcttgttgaagataattttttagaactc-ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | ||||||||||| |||||| ||||||||||||||||||||| ||| || ||||||    
T  2209758 gagcttgttgaagctaatttcttgtaacccattttgtatctctttgtaa-gaactcattgatagtggattggagagattaatctc 2209841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 12744017 - 12743966
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  12744017 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 12743966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 12744139 - 12744088
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  12744139 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 12744088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 12745406 - 12745355
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  12745406 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 12745355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 12745528 - 12745477
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  12745528 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 12745477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 32091519 - 32091583
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgat 162  Q
    ||||||| ||||||||  |||||| ||  |||||||||||||||| ||||||||||| |||||||    
T  32091519 tggagagtttgttgaaactaatttcttgtaactcttttgtatctctttgtaaagaacacattgat 32091583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 34570534 - 34570455
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| |  ||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  34570534 cttgttgaagctaatttcttgtaacccaattgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 34570455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 48143091 - 48143170
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| |||||||||||| |  ||| ||||||||||||||||||||| ||| |||||||||    
T  48143091 cttgttgaagctaatttcttgtaacccttttgtatctcttcataa-gaactcattgatagtggattggagagatcaatctc 48143170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 379425 - 379507
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||| | |||||| ||||| ||||||||||||||| ||| |||||||||    
T  379425 gagcttgttgaagctaatttcttgtaacccatttgtatcgctttgtaa-gaactaattgatagtggattggagagatcaatctc 379507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 3913497 - 3913575
Alignment:
Q  106 ttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| |||||| ||  ||| | ||||||| || |||||| ||||||||||||||||||||| ||| |||||||||    
T  3913497 ttgttgaagctaatttcttttaacccatttgtatatctttgtaa-gaactcattgatagtggattggagagatcaatctc 3913575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 29254539 - 29254621
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | ||||| |||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  29254539 gagcttgttgaagttaatttcttgcaacccatttgtgtctctttgtaa-gaactcgttgatagtggattggagagatcaatctc 29254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 31474200 - 31474278
Alignment:
Q  106 ttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||| ||||| ||| || ||||||    
T  31474200 ttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagttgattggagagataaatctc 31474278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 36463512 - 36463430
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||| |||||||| |||| ||||||||| ||| |||||||||    
T  36463512 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttgacagtggattggagagatcaatctc 36463430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 45687305 - 45687223
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||  ||| |||||| ||| ||||| |||||||||  |||||| ||||||||||||||||||||| ||| ||| |||||    
T  45687305 gagcttgtcaaagctaatttcttataactcatttgtatctatttgtaa-gaactcattgatagtggattggagagatctatctc 45687223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 6542273 - 6542220
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  6542273 cttttgtatctctttgtaa-gaactcgttgatagtggattggagagatcaatctc 6542220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 13992390 - 13992334
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| |||  ||||||||    
T  13992390 aactcttttgtatctc-ttgtaa-gaactcattgatagtggattggagagttcaatctc 13992334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 29999905 - 29999847
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||  ||   ||||||||||||||||||||||| ||| |||||||||    
T  29999905 aactcttttgtatcttttttgtaagaactcattgatagtggattggagagatcaatctc 29999847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 22629022 - 22628950
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcatt--gtaaagaactcattgatagtgga 168  Q
    |||||||||| |||||| |||||| ||| |||||||||| |||||  |  |||||||||||||||||| ||||    
T  22629022 tggagagcttattgaagttaatttcttataactcttttgcatctctcttagtaaagaactcattgatactgga 22628950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 41964491 - 41964543
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| | |||||| ||||||||||||||||||||| ||| |||||||||    
T  41964491 ttttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctc 41964543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 46703576 - 46703628
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||| |||||| ||||||||| ||||||||||| ||| |||||||||    
T  46703576 ttttgtatctctttgtaa-gaactcatttatagtggattggagagatcaatctc 46703628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 51337119 - 51337191
Alignment:
Q  112 aagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| ||| ||| |||||||||||| || ||| |||||||||||||||| |||  ||| |||||||||    
T  51337119 aagataatttattataacccttttgtatctctttttaa-gaactcattgatagtgtattagagagatcaatctc 51337191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 24398102 - 24398185
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| |||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||    
T  24398102 gagcttgttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattgataatggattggagagatcaatctc 24398185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 17057491 - 17057410
Alignment:
Q  103 agcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||||||  ||||| |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  17057491 agcttgttgaagctaattttttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 17057410  T

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Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 17085474 - 17085393
Alignment:
Q  103 agcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||||||  ||||| |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  17085474 agcttgttgaagctaattttttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 17085393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 17490271 - 17490189
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  |||||||||||| ||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  17490271 gagcttgttgaagctaatttcttgtaactcttttgtaactctttgtaa-gaactcattgatagtggattgtagagatcaatctc 17490189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 2334538 - 2334459
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| |   |||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  2334538 cttgttgaagctaatttctagtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 2334459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 13121814 - 13121894
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||||||| ||  ||  | |||||||||| ||||| | ||||||||||||||||||||||||||||||||||    
T  13121814 gagcttgttgaagataatttcttgtaa--cctttgtatctctttgtaga-aactcattgatagtggattgaagaaatcaatctc 13121894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 42261613 - 42261545
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    ||||||||||||||||| |||||| ||  ||||||||||||| || |||||||| ||||||||||||||    
T  42261613 tggagagcttgttgaagctaatttcttgtaactcttttgtatatctttgtaaagtactcattgatagtg 42261545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 1631855 - 1631773
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||| | ||  ||| | |||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  1631855 gagcttgttgaagctaatatcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagaaatcaatctc 1631773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 33648216 - 33648299
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| ||||||  |  ||| ||||||||| || ||||||||||||||||||||| |||||| ||| |||||||||    
T  33648216 gagcttgttgaagctaatttcctgtaacccttttgtatttctttgtaaagaactcattgatagcggattggagagatcaatctc 33648299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 36773607 - 36773689
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  36773607 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctc 36773689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 7815395 - 7815314
Alignment:
Q  103 agcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||  |||||||||||||||| |||| ||||||||||| ||||||||||| ||| || ||||||    
T  7815395 agcttgttgaagctaatttcttgtaactcttttgtatctctttgt-aagaactcatttatagtggattggagagattaatctc 7815314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 36988174 - 36988117
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  36988174 aactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 36988117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 11049598 - 11049681
Alignment:
Q  102 gagcttgttgaagataattttttagaactctttt-gtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| ||||||| | |||||||||    
T  11049598 gagcttgttgaagctaatttcttataacccttttagtatctctttgtaa-gaactcattgatagtagattgaaaagatcaatctc 11049681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 34811347 - 34811272
Alignment:
Q  100 gagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaaga 175  Q
    ||||||||||||||| |||||| ||  ||||||||| |||||| ||||||  ||||||||||||||| | ||||||    
T  34811347 gagagcttgttgaagctaatttattgtaactcttttatatctctttgtaagaaactcattgatagtgaaatgaaga 34811272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 36318132 - 36318050
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||  |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  36318132 gagcttgttgaaactaatttattgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 36318050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 45726974 - 45727056
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  |||   |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  45726974 gagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 45727056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 41454277 - 41454343
Alignment:
Q  100 gagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    ||||||||||||||| |||||| |   ||||||||||||| |  |||||||||||||||||||||||    
T  41454277 gagagcttgttgaagctaatttctagcaactcttttgtatatatttgtaaagaactcattgatagtg 41454343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 5723349 - 5723297
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  5723349 ttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 5723297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 183
Target Start/End: Complemental strand, 30218172 - 30218087
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatc 183  Q
    |||||||||| |||||| |||||| ||  |||  ||||||||||| ||||||| || ||||||||||||| ||||| | |||||||    
T  30218172 tggagagcttattgaagctaatttcttgtaaccattttgtatctctttgtaaataattcattgatagtgggttgaaaagatcaatc 30218087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 6595126 - 6595047
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| |||||| ||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  6595126 cttgttgaagctaatttcttgtaacccttttgaatctctttgtaa-gaactcgttgatagtggattggagagatcaatctc 6595047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 7451166 - 7451245
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  || || |||||||||| ||||||  |||||||||||||||||||| ||| |||||||||    
T  7451166 cttgttgaagctaatttcttgtaattcatttgtatctctttgtaat-aactcattgatagtggattgcagagatcaatctc 7451245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 723867 - 723785
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||| |||||| ||  ||| | |||||||| | |||||| ||||||||||||||||||||| ||| |||||||||    
T  723867 gagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctc 723785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 4503230 - 4503174
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| |||  ||||||||    
T  4503230 aactcttttgtatctctttg--aagaactcattgatagtggattggagagttcaatctc 4503174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 33162573 - 33162491
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | ||||||||||  ||||| ||||||||||||||||||||  ||| |||||||||    
T  33162573 gagcttgttgaagctaatttcttgtaacccatttgtatctctctgtaa-gaactcattgatagtggattagagagatcaatctc 33162491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 45099825 - 45099881
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| |||  ||||||||    
T  45099825 aactcttttgtatctctttg--aagaactcattgatagtggattggagagttcaatctc 45099881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 3897041 - 3897103
Alignment:
Q  108 gttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggatt 170  Q
    ||||||| |||||||||  |||||||||||||    |||||||||||||||||| ||||||||    
T  3897041 gttgaagctaattttttgtaactcttttgtataattttgtaaagaactcattgaaagtggatt 3897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 42019995 - 42019911
Alignment:
Q  103 agcttgttgaagataattttttagaactcttttgtatctcattgt--aaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||| |||| |||||| ||  |||||||||||||||| ||||  ||| ||||||||||||||| |||  ||| |||||||||    
T  42019995 agcttgtagaagctaatttcttgtaactcttttgtatctctttgtaaaaaaaactcattgatagtgaatttgagagatcaatctc 42019911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 11067381 - 11067432
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||| |||||||||    
T  11067381 tttgtatctctttgtaa-gaactcatttataatggattgaagagatcaatctc 11067432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 29867945 - 29867996
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  29867945 tttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctc 29867996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 34139847 - 34139811
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  34139847 aagaactcattgatagtggattggagagatcaatctc 34139811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 35446976 - 35446925
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||| ||||    
T  35446976 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcactctc 35446925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 38312316 - 38312367
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| || |||||||||||||||||| ||| |||||||||    
T  38312316 tttgtatctctttgtaa-gatctcattgatagtggattggagagatcaatctc 38312367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 27567 - 27483
Alignment:
Q  101 agagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||| |||||| ||  ||||| |||||||||| ||||||| |||| ||||||||||||||| ||| |||||||||    
T  27567 agagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaaataacttattgatagtggattggagagatcaatctc 27483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 13239799 - 13239878
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  |||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  13239799 cttgttgaagctaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 13239878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 40147306 - 40147388
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  40147306 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 40147388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 316803 - 316874
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggat 169  Q
    ||||||||||||||||| |||||| ||  ||  |||||||||||| |||||||||||||||||||| |||||    
T  316803 tggagagcttgttgaagctaatttcttgtaatccttttgtatctctttgtaaagaactcattgataatggat 316874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 533814 - 533896
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||||||  ||| | |||||||||| |||||| ||||||||||||||||||||| | | |||||||||    
T  533814 gagcttgttgaagctaattttttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggaaagatcaatctc 533896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 28278361 - 28278443
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| ||||||| |||||||||||||||||||| ||| |||||||||    
T  28278361 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaaa-aactcattgatagtggattggagagatcaatctc 28278443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 33831725 - 33831807
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  33831725 gagcttgtttaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattgaagagatcaatctc 33831807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 37439211 - 37439268
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  37439211 aactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 37439268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 10054940 - 10054860
Alignment:
Q  101 agagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaat 182  Q
    |||| ||||||||| |||||| ||| ||| |||||||||||| |||||| |||||||||||||||| |||| ||| ||||||    
T  10054940 agagtttgttgaagctaatttcttataac-cttttgtatctctttgtaatgaactcattgatagtgtattggagatatcaat 10054860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 13488251 - 13488330
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  13488251 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 13488330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 13695814 - 13695746
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggatt 170  Q
    ||||||||| ||| |||||| ||  ||| |||||||||||| |||||||||||||||| ||||||||||    
T  13695814 gagcttgttaaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattaatagtggatt 13695746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 42310058 - 42309991
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggatt 170  Q
    ||||||||||||| |||||| ||  |||||||||||||||| |||| ||||||| ||||||||||||||    
T  42310058 gagcttgttgaagctaatttcttgtaactcttttgtatctctttgt-aagaacttattgatagtggatt 42309991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 42428550 - 42428471
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  42428550 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 42428471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 42926959 - 42927018
Alignment:
Q  125 agaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||| |||||||||| |||||| ||||||||||| |||||||||||||||| ||||||    
T  42926959 agaactcatttgtatctctttgtaa-gaactcattgacagtggattgaagaaataaatctc 42927018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 213510 - 213592
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  213510 gagcttgttaaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 213592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 538070 - 538152
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||| ||||| ||| |||||||||    
T  538070 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtagattggagagatcaatctc 538152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 33906158 - 33906071
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||| ||| || ||  ||  |||||||||||| |||||||||||||||||||||| ||||| | | |||||||||    
T  33906158 tggagagcttgtcgaagctaacttcttgtaatccttttgtatctctttgtaaagaactcattgatagtagattggaaagatcaatctc 33906071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 42426354 - 42426276
Alignment:
Q  106 ttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  42426354 ttgttgaagctaatttcttgcaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 42426276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 25412834 - 25412887
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  25412834 cttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 25412887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 5058121 - 5058172
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  5058121 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 5058172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 9049465 - 9049386
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaat 182  Q
    ||||||||||||| |||||| ||  |||  ||||||||||| |||||| ||||||||||| ||||||||| ||| ||||||    
T  9049465 gagcttgttgaagctaatttcttgtaaccattttgtatctctttgtaa-gaactcattgacagtggattggagagatcaat 9049386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 35616210 - 35616278
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    ||||||||| ||| ||| |||||| ||  ||| ||||||||| || |||||||||||||||||||||||    
T  35616210 tggagagctcgtttaagttaatttcttgtaacccttttgtatttctttgtaaagaactcattgatagtg 35616278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 39468669 - 39468590
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||  ||| |||||||||    
T  39468669 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattagagagatcaatctc 39468590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 16452125 - 16452207
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||| ||||||||||| ||| || ||||||    
T  16452125 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattcatagtggattggagagataaatctc 16452207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 32609578 - 32609641
Alignment:
Q  100 gagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgata 163  Q
    ||||| ||||||||| |||||| ||  ||||||||||||| || |||||||||||| |||||||    
T  32609578 gagagtttgttgaagttaatttcttgtaactcttttgtatttctttgtaaagaacttattgata 32609641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 36074140 - 36074084
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| |||  ||||||||    
T  36074140 aactcttttgtatctctttg--aagaactcattgatagtggattggagagttcaatctc 36074084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 38747050 - 38747132
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| ||| ||| ||||||||||||| |||||| ||| |||||||||    
T  38747050 gagcttgttgaagctaatttcttgtaacccatttgtatctctttggaaa-aactcattgatagaggattggagagatcaatctc 38747132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 9789323 - 9789265
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| ||   ||||||||||||||||||||||| |||  ||||||||    
T  9789323 aactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctc 9789265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 16409544 - 16409602
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| ||   ||||||||||||||||||||||| |||  ||||||||    
T  16409544 aactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctc 16409602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 18441747 - 18441689
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| ||   ||||||||||||||||||||||| |||  ||||||||    
T  18441747 aactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctc 18441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 26177951 - 26178009
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| ||   ||||||||||||||||||||||| |||  ||||||||    
T  26177951 aactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctc 26178009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 3325957 - 3326026
Alignment:
Q  101 agagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggatt 170  Q
    |||||||||||||| |||||| ||  |||  || |||||||| |||||||||||||| |||| |||||||    
T  3325957 agagcttgttgaagctaatttcttgtaaccattgtgtatctctttgtaaagaactcaatgatggtggatt 3326026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 16641060 - 16640981
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| | |||| | | |||||||||||||||| |||| ||||||   |||||||||||||| ||| |||||||||    
T  16641060 gagcttgttgaagctgatttctgataactcttttgtatctctttgt-aagaac---ttgatagtggattggagagatcaatctc 16640981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 30683044 - 30682963
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaaga-actcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| ||||||||| || ||||||  | ||||||||||||||||||| ||| |||||||||    
T  30683044 cttgttgaagctaatttcttgtaacccttttgtatttctttgtaagaatactcattgatagtggattggagagatcaatctc 30682963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 32583379 - 32583342
Alignment:
Q  129 ctcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    |||||||||||||  |||||||||||||||||||||||    
T  32583379 ctcttttgtatctttttgtaaagaactcattgatagtg 32583342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 8566023 - 8565987
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  8566023 aagaactcattgatagtggattggagagatcaatctc 8565987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 27015599 - 27015650
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| | | |||||||||    
T  27015599 tttgtatctctttgtaa-gaactcattgatagtggattgtacagatcaatctc 27015650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 28750732 - 28750696
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  28750732 aagaactcattgatagtggattggagagatcaatctc 28750696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 32636900 - 32636951
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  32636900 tttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctc 32636951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 7e-16; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 23565184 - 23565102
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||  |||||| ||  |||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  23565184 gagcttgttgaaactaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 23565102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 29608782 - 29608862
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatc 183  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||| ||| |||||||    
T  29608782 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggattggagatatcaatc 29608862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 1113702 - 1113784
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||| ||| | |||||||||| |||||| ||||||||||||||| ||||| ||| |||||||||    
T  1113702 gagcttgttgaagctaatttcttataacccatttgtatctctttgtaa-gaactcattgatagtagattggagagatcaatctc 1113784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 2361095 - 2361013
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||| ||||||||||||||||||||  ||| |||||||||    
T  2361095 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactcattgatagtggatttgagatatcaatctc 2361013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 5116653 - 5116732
Alignment:
Q  106 ttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| ||  ||  |||||||||||| ||||||||||||||||||||||| |||| ||| || ||||||    
T  5116653 ttgttgaagataatttattgtaaaccttttgtatctctttgtaaagaactcattgatagtgaattggagagataaatctc 5116732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 19502223 - 19502305
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||  ||| |||||| ||  |||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  19502223 gagcttgtcaaagctaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 19502305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 26417361 - 26417443
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||||||| ||  ||| | |||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  26417361 gagcttgttgaagataatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattggagagatcaatctc 26417443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 32358177 - 32358095
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  32358177 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 32358095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 36574635 - 36574558
Alignment:
Q  106 ttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatc 183  Q
    ||||||||| |||||| ||  ||| ||||| |||||| |||||||||||||||||||||||| ||| ||| |||||||    
T  36574635 ttgttgaagctaatttcttgtaacccttttatatctctttgtaaagaactcattgatagtggtttggagagatcaatc 36574558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 2759317 - 2759238
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||||| ||| |||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  2759317 cttgttgaagctaatttcttgtaactcatttatatctctttgtaa-gaactcattgatagtggattggagatatcaatctc 2759238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 4510625 - 4510589
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||||||||||||||||||||||||    
T  4510625 aagaactcattgatagtggattgaagaaatcaatctc 4510589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 4512467 - 4512431
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||||||||||||||||||||||||    
T  4512467 aagaactcattgatagtggattgaagaaatcaatctc 4512431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 4586209 - 4586288
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||||||  ||| | ||| |||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  4586209 cttgttgaagctaattttttgtaacccatttttatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 4586288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 23555088 - 23555167
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| |||||||| ||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  23555088 cttgttgaagctaatttcttgtaacacttttgtacctctttgtaa-gaactcattgatagtggattggagagatcaatctc 23555167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 27347865 - 27347944
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  27347865 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattgcagagatcaatctc 27347944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 47674063 - 47673984
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  47674063 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 47673984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 48491627 - 48491706
Alignment:
Q  105 cttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||  ||| | |||||||||| ||| |||||||||||||||||||||||| ||| |||||||||    
T  48491627 cttgttgaagctaatttcttgtaacccatttgtatctctttg-aaagaactcattgatagtggattggagagatcaatctc 48491706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 496106 - 496024
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| || ||| ||||||||||||||||||||| ||| |||||||||    
T  496106 gagcttgttgaagctaatttcttgcaacccatttgtatctctttataa-gaactcattgatagtggattggagagatcaatctc 496024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 3259040 - 3259122
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| ||| |||||| ||  ||||| |||||||||| ||||||| ||| |||||||||||||||| ||| |||||||||    
T  3259040 gagcttgtttaagctaatttattgtaactcatttgtatctctttgtaaa-aacccattgatagtggattggagagatcaatctc 3259122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 6360075 - 6359993
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||| ||||| ||| |||||||||    
T  6360075 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagttgattggagagatcaatctc 6359993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 6432016 - 6432098
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| |||||| |||||||||||||| ||| |||||||||    
T  6432016 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattggagagatcaatctc 6432098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 22270018 - 22270100
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||| ||||||||||||||| ||| |||||||||    
T  22270018 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactgattgatagtggattggagagatcaatctc 22270100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 22328514 - 22328431
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  |||||||||||||||| ||| || ||| ||||| ||||||||||  ||| |||||||||    
T  22328514 gagcttgttgaagctaatttcttgtaactcttttgtatctctttgcaaggaagtcattaatagtggatttgagagatcaatctc 22328431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 48599457 - 48599375
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| ||| || || |||||||||||||||||| ||| |||||||||    
T  48599457 gagcttgttgaagctaatttcttgtaactcatttgtatctctttggaa-gagctcattgatagtggattggagagatcaatctc 48599375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 8359409 - 8359357
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  8359409 ttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 8359357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 30024855 - 30024775
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatc 183  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| |||||| |||||||||||||| ||| |||||||    
T  30024855 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatc 30024775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 14069925 - 14069874
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  14069925 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 14069874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 14379953 - 14379902
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  14379953 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 14379902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 18126720 - 18126771
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| || ||||||||||    
T  18126720 tttgtatctctttgtaa-gaactcattgatagtggattggaggaatcaatctc 18126771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 24525594 - 24525543
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  24525594 tttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 24525543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 4253652 - 4253569
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| ||||||  |  ||| ||||| |||||| ||| |||||||||||||||| ||||||  ||| |||||||||    
T  4253652 gagcttgttgaagctaatttcatgtaacccttttatatctctttggaaagaactcattgataatggattagagagatcaatctc 4253569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 4508829 - 4508747
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||| |||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||| ||||||||| ||| |||||||||    
T  4508829 gagcttattgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgagagtggattggagagatcaatctc 4508747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 31733092 - 31733010
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||| ||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||| ||||||| ||| |||||||||    
T  31733092 gagcttggtgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatactggattggagagatcaatctc 31733010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 34310835 - 34310757
Alignment:
Q  106 ttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||| |||||| ||  ||| | |||||||||  |||||| ||||||||||||||||||||| ||| |||||||||    
T  34310835 ttgttgaagctaatttcttgtaacacatttgtatctttttgtaa-gaactcattgatagtggattggagagatcaatctc 34310757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 43363601 - 43363531
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctc--attgtaaagaactcattgatagtg 166  Q
    ||||||||||||||||  |||||| ||  ||||||||||||||||   ||||||| |||||||||||||||    
T  43363601 tggagagcttgttgaaactaatttattgtaactcttttgtatctctatttgtaaataactcattgatagtg 43363531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 8153412 - 8153469
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||| |||||||||| ||||||  |||||||||||||||||||| ||| |||||||||    
T  8153412 aactcatttgtatctctttgtaat-aactcattgatagtggattggagagatcaatctc 8153469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 31518972 - 31519029
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||| |||||||||| |||||| ||||||||||| ||||||||| ||| |||||||||    
T  31518972 aactcatttgtatctctttgtaa-gaactcattgacagtggattggagagatcaatctc 31519029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 35853988 - 35854041
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||  ||||||||    
T  35853988 cttttgtatctctttgtaa-gaactcattgatagtggattggagagttcaatctc 35854041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 38671345 - 38671264
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatct 184  Q
    ||||||||| ||| |||||| ||  ||| | |||||||| | |||||| ||||||||||||||||||||||||| || |||||    
T  38671345 gagcttgtttaagctaatttattgtaacacatttgtatcactttgtaa-gaactcattgatagtggattgaagagataaatct 38671264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 39731438 - 39731496
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||||||| ||   ||||||||||||||||||||||| |||  ||||||||    
T  39731438 aactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctc 39731496  T

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Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 18396392 - 18396445
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||| || ||||||| |||||||||| |||||| ||| |||||||||    
T  18396392 ttttgtatctctttataaagaattcattgatagaggattggagagatcaatctc 18396445  T

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Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 27073868 - 27073925
Alignment:
Q  109 ttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    |||||| |||||| ||  |||||||||||||||| ||||||||||||| |||| ||||    
T  27073868 ttgaagttaatttcttgtaactcttttgtatctctttgtaaagaactcgttgacagtg 27073925  T

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Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 27204445 - 27204388
Alignment:
Q  109 ttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    |||||| |||||| ||  |||||||||||||||| ||||||||||||| |||| ||||    
T  27204445 ttgaagttaatttcttgtaactcttttgtatctctttgtaaagaactcgttgacagtg 27204388  T

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Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 36146500 - 36146449
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| |||||| ||||||||||||||||||||  ||| |||||||||    
T  36146500 tttgtatctctttgtaa-gaactcattgatagtggatttgagagatcaatctc 36146449  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 41317511 - 41317475
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  41317511 aagaactcattgatagtggattggagagatcaatctc 41317475  T

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Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 41649088 - 41649052
Alignment:
Q  149 aagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  41649088 aagaactcattgatagtggattggagagatcaatctc 41649052  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 43864320 - 43864371
Alignment:
Q  133 tttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||| ||||||| |||| ||||||||||||||| ||| |||||||||    
T  43864320 tttgtatctctttgtaaa-aactaattgatagtggattggagagatcaatctc 43864371  T

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Target: scaffold0176 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 18126 - 18045
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||||| |||||||||| |||||||  ||||||||||||||||||| ||| |||||||||    
T  18126 gagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaaa--actcattgatagtggattggagagatcaatctc 18045  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 490448 - 490380
Alignment:
Q  98 tggagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    ||||||||||||||||| |||||| ||  ||||||||||||| || |||||||| ||||||||||||||    
T  490448 tggagagcttgttgaagctaatttcttgtaactcttttgtatatctttgtaaagtactcattgatagtg 490380  T

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Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 434607 - 434660
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||  ||||||||    
T  434607 cttttgtatctctttgtaa-gaactcattgatagtggattggagagttcaatctc 434660  T

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Target: scaffold0466 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 7372 - 7454
Alignment:
Q  102 gagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||||| |||||| ||  ||| | |||||||||| |||||| ||||||||||||||||||||| | | |||||||||    
T  7372 gagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggaaagatcaatctc 7454  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 25096 - 25162
Alignment:
Q  100 gagagcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtg 166  Q
    ||||| ||||||||| |||||| ||  |||  ||||||||||| |||||||||||||||||||||||    
T  25096 gagagtttgttgaaggtaatttcttgtaacctttttgtatctctttgtaaagaactcattgatagtg 25162  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 114676 - 114729
Alignment:
Q  131 cttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  114676 cttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 114729  T

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Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 10564 - 10616
Alignment:
Q  132 ttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||||||||| |||||| |||||| |||||||||||||||||| |||||||||    
T  10564 ttttgtatctctttgtaa-gaactcgttgatagtggattgaagagatcaatctc 10616  T

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Target: scaffold0286 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 11627 - 11684
Alignment:
Q  127 aactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||| |||  ||||||||    
T  11627 aactcatttgtatctctttgtaa-gaactcattgatagtggattggagagttcaatctc 11684  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 149219 - 149138
Alignment:
Q  103 agcttgttgaagataattttttagaactcttttgtatctcattgtaaagaactcattgatagtggattgaagaaatcaatctc 185  Q
    |||||||||||| |||||| ||   || | ||| |||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  149219 agcttgttgaagctaatttcttgttacccatttatatctctttgtaa-gaactcattgatagtggattggagagatcaatctc 149138  T

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