View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17902_high_9 (Length: 297)
Name: NF17902_high_9
Description: NF17902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17902_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 21 - 288
Target Start/End: Original strand, 675527 - 675798
Alignment:
| Q |
21 |
tcctctcacttataaaagtgtttaataaatacttctcaagtatatagtattatatataagaaaaagttgaataagcaaaattgaatgtatttaaacaaat |
120 |
Q |
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| T |
675527 |
tcctctcacttataaaagtgtttaacaaatacttctcaagtatataatattatatataagaaaaagttgaataagcaaaattgaatgtatttaaacaaat |
675626 |
T |
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| Q |
121 |
tttagactaataatatcaacttttattgactcaatttttcttatatataagaccaaaaataataacgatcgatgcata----nnnnnnncaaatattttt |
216 |
Q |
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| T |
675627 |
tttagactaataatatcaacttttattgactcaatttttcttatatataagaccaaaaataataacgatcaatgcgtattttttttttccaaatatttta |
675726 |
T |
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| Q |
217 |
cctgcaactattatatgagttgtatttacgtgactcaacacattctatattaaaagctgtagagagtataat |
288 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
675727 |
cctgcaactattatatgagttgcatttacgtgactcaacacattctatattaaaagctgtagagagtataat |
675798 |
T |
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