View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17903_high_33 (Length: 378)
Name: NF17903_high_33
Description: NF17903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17903_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 11 - 359
Target Start/End: Original strand, 8861245 - 8861595
Alignment:
| Q |
11 |
cacagaggccagaaaaactagacctagatgctaatggtactgtttgactgattttccagtttacatccaaattcattaagatttt-ggtaactcggtcnn |
109 |
Q |
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| T |
8861245 |
cacagaggccagaaaaactagacctagatgctaatggtactgtttgactgattttccagtttacatccaaattcattaagatttttggtaactctgtcaa |
8861344 |
T |
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| Q |
110 |
nnnnnn-cataccaagaagagattgtacaaaatgcagaatatcttatcattattattttcatgctacaaaaataataagggcacgcactaccaaatccac |
208 |
Q |
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| T |
8861345 |
aaaaaaacataccaagaagagattgtacaaaatgcagaatatcttatcattattattttcatgctacaaaaataataagggcacgcactaccaaatccac |
8861444 |
T |
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| Q |
209 |
tgaaaacatgatagtacaagtctaaattatttcacagacaagttaaagacaaaattttgattgtgaccaagccaaattcacactatgaaagagaggaaag |
308 |
Q |
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| T |
8861445 |
tgaaaacatgatagtacaagtctaaattatttcacagacaagttaaagacaaaattttgattgtgaccaagccaaattcacactatgaaagagaggaaag |
8861544 |
T |
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| Q |
309 |
aaagtaccgactcatttaacatgggtttagtttagtatatttagttggagc |
359 |
Q |
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| T |
8861545 |
aaagtaccgactcatttaacatgggtttagtttagtatatttagttggagc |
8861595 |
T |
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