View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17903_high_41 (Length: 345)
Name: NF17903_high_41
Description: NF17903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17903_high_41 |
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| [»] scaffold0325 (1 HSPs) |
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Alignment Details
Target: scaffold0325 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0325
Description:
Target: scaffold0325; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 256
Target Start/End: Complemental strand, 7562 - 7319
Alignment:
| Q |
13 |
aaaattgaataaaataaaattttattgtgttaccttctttccgtaaggatcattatcaaaatttccatcatcaaattcagcagaagacctcttatgactt |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7562 |
aaaattgaataaaataaaattttattgtgttaccttctttccgtaaggatcattatcaaaatttccatcatcaaattcagcagaagacctcttatgactt |
7463 |
T |
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| Q |
113 |
acagtatctaattcataacgatgaaagaaacaataagaaaatgttgaatgaattgaatagcattaccatgtgaannnnnnnatgagaaaagtaaaacctg |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
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| T |
7462 |
acagtatctaattcataacgatgaaagaaacaataagaaaatgttgaatgaattgaatagcattagcatgtgaatttttttatgagaaaagtaaaacctg |
7363 |
T |
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| Q |
213 |
aacgcgttccggtaactcgttctccgaaatcaaattcctgctgt |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7362 |
aacgcgttccggtaactcgttctccgaaatcaaattcctgctgt |
7319 |
T |
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