View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17903_high_63 (Length: 284)
Name: NF17903_high_63
Description: NF17903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17903_high_63 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 42 - 269
Target Start/End: Original strand, 7406031 - 7406256
Alignment:
| Q |
42 |
caccacatatacttgctgttgagagtgtagacttgactctccccacccaattatcattccaaaacaaa-gttgatgacatctcttaggttagttggagga |
140 |
Q |
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| T |
7406031 |
caccacatatactagttgttgagagtgtagacttgactctccccacccaattatcattccaaaacaaaagttgatgacatctcttaggttagttggag-- |
7406128 |
T |
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| Q |
141 |
ggggtcacttgaattaataataatgtaatagttttcttcatgcaaatcagtatatgggcatgaatacacttcacgaatattggtctttcaaaaataaaat |
240 |
Q |
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| T |
7406129 |
-gggtcacttgaattaataatataataatagttttcttcatgcaaatcagtatatgggcatgaatacacttcacgaatattggtctttaaaaaataaaat |
7406227 |
T |
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| Q |
241 |
atagaatattggtctttcaatgatatata |
269 |
Q |
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| T |
7406228 |
atagaatattggtctttcaattatatata |
7406256 |
T |
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