View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17903_high_80 (Length: 249)
Name: NF17903_high_80
Description: NF17903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17903_high_80 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 34283319 - 34283553
Alignment:
| Q |
1 |
ataccaaattatttttctatgtcttatataaattgattttaagatatgttgtgtttttgatatgttctaatgaagaggccacgtataatacaaattatag |
100 |
Q |
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| T |
34283319 |
ataccaaattatttttctctgtcttatataaattgattttaagatatgttgtgttttggatatgttctaatgaagaggccacgtataatacaaattatag |
34283418 |
T |
|
| Q |
101 |
aatcttggtcaagtcaaatttactttatgcatgtaattcatggactggtcatagtcataactaaataccgtgccaaaagttcaagttcaagacatgaaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
34283419 |
aatcttggtcaagtcaaatttactttatgcatgtaattcatggactggtcatagtcataactatataccgtgccaaaagttcaagttcaagacatgaaag |
34283518 |
T |
|
| Q |
201 |
aacgcgtgatcaatctcagaaaacccctatttgat |
235 |
Q |
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|||||||||||||||| | |||||||||||||||| |
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| T |
34283519 |
aacgcgtgatcaatcttaaaaaacccctatttgat |
34283553 |
T |
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