View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17903_low_36 (Length: 364)

Name: NF17903_low_36
Description: NF17903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17903_low_36
NF17903_low_36
[»] chr5 (40 HSPs)
chr5 (98-325)||(18728489-18728720)
chr5 (98-325)||(33256406-33256637)
chr5 (98-325)||(32087520-32087751)
chr5 (100-325)||(35395339-35395566)
chr5 (117-325)||(43317966-43318178)
chr5 (105-322)||(38177987-38178208)
chr5 (105-322)||(38205211-38205432)
chr5 (117-325)||(35292288-35292499)
chr5 (123-264)||(38597012-38597157)
chr5 (232-325)||(38596874-38596967)
chr5 (243-323)||(32089928-32090008)
chr5 (243-323)||(33257763-33257843)
chr5 (243-323)||(40330518-40330598)
chr5 (117-321)||(17574328-17574535)
chr5 (138-321)||(36057540-36057727)
chr5 (258-323)||(42619297-42619362)
chr5 (243-323)||(32835884-32835964)
chr5 (1-57)||(35395609-35395665)
chr5 (9-56)||(18728399-18728446)
chr5 (250-323)||(18726573-18726646)
chr5 (1-49)||(32087801-32087849)
chr5 (117-285)||(30468186-30468358)
chr5 (117-321)||(34327645-34327853)
chr5 (105-178)||(32838394-32838467)
chr5 (243-316)||(38176647-38176720)
chr5 (243-316)||(38203871-38203944)
chr5 (9-52)||(33256683-33256726)
chr5 (243-321)||(8541272-8541350)
chr5 (243-321)||(24541248-24541326)
chr5 (243-315)||(35291064-35291136)
chr5 (117-321)||(18624914-18625122)
chr5 (142-282)||(24496792-24496936)
chr5 (243-321)||(2852896-2852974)
chr5 (243-321)||(7269447-7269525)
chr5 (243-321)||(12738737-12738815)
chr5 (243-321)||(12801560-12801638)
chr5 (243-321)||(30463910-30463988)
chr5 (117-182)||(2179940-2180005)
chr5 (117-182)||(8539828-8539893)
chr5 (117-173)||(42620690-42620746)
[»] chr3 (62 HSPs)
chr3 (98-341)||(23888659-23888907)
chr3 (105-325)||(23774158-23774381)
chr3 (105-325)||(48633883-48634111)
chr3 (105-325)||(18430165-18430389)
chr3 (105-335)||(45257114-45257348)
chr3 (105-325)||(24382787-24383011)
chr3 (187-325)||(45898324-45898466)
chr3 (105-325)||(41020897-41021121)
chr3 (117-325)||(31887358-31887570)
chr3 (154-325)||(40508854-40509029)
chr3 (105-325)||(33113075-33113298)
chr3 (105-281)||(33852564-33852744)
chr3 (105-325)||(51454140-51454368)
chr3 (118-276)||(1845839-1846001)
chr3 (142-325)||(39641770-39641957)
chr3 (117-323)||(2977235-2977445)
chr3 (98-158)||(45898264-45898324)
chr3 (117-321)||(53190686-53190893)
chr3 (243-323)||(45897058-45897138)
chr3 (1-57)||(45898166-45898222)
chr3 (117-321)||(2226079-2226286)
chr3 (258-323)||(18428757-18428822)
chr3 (117-321)||(27899007-27899215)
chr3 (117-321)||(30599844-30600052)
chr3 (117-321)||(51684620-51684828)
chr3 (258-323)||(33850990-33851055)
chr3 (243-323)||(1847648-1847728)
chr3 (243-323)||(23887206-23887286)
chr3 (243-323)||(33111849-33111929)
chr3 (243-323)||(40508501-40508581)
chr3 (243-323)||(48635376-48635456)
chr3 (243-321)||(2660222-2660300)
chr3 (134-321)||(21348733-21348924)
chr3 (243-321)||(38193511-38193589)
chr3 (263-325)||(40998521-40998583)
chr3 (243-321)||(41979353-41979431)
chr3 (243-321)||(46308817-46308895)
chr3 (243-321)||(53094274-53094352)
chr3 (21-57)||(24382699-24382735)
chr3 (117-233)||(42279609-42279725)
chr3 (117-233)||(48830732-48830848)
chr3 (9-56)||(23888570-23888617)
chr3 (117-321)||(41977760-41977967)
chr3 (117-321)||(54898447-54898654)
chr3 (243-321)||(3150262-3150340)
chr3 (117-183)||(7884800-7884866)
chr3 (243-289)||(37865426-37865472)
chr3 (243-321)||(54900075-54900153)
chr3 (244-317)||(24381758-24381831)
chr3 (21-57)||(18430085-18430121)
chr3 (21-57)||(51454066-51454102)
chr3 (243-318)||(31885531-31885606)
chr3 (243-321)||(2661909-2661987)
chr3 (243-321)||(38191905-38191983)
chr3 (243-325)||(41944582-41944664)
chr3 (243-321)||(44794218-44794295)
chr3 (243-321)||(44795891-44795969)
chr3 (243-321)||(46310437-46310515)
chr3 (243-321)||(53187752-53187830)
chr3 (117-182)||(23293096-23293161)
chr3 (117-181)||(17515464-17515528)
chr3 (251-319)||(23291582-23291650)
[»] chr1 (48 HSPs)
chr1 (98-325)||(46638694-46638925)
chr1 (98-325)||(36895397-36895628)
chr1 (98-340)||(31801624-31801870)
chr1 (105-325)||(42134488-42134712)
chr1 (105-325)||(35479870-35480093)
chr1 (105-325)||(27940614-27940838)
chr1 (105-281)||(45380878-45381058)
chr1 (105-325)||(33685143-33685366)
chr1 (105-325)||(44157439-44157662)
chr1 (105-325)||(47269350-47269574)
chr1 (105-325)||(18183838-18184061)
chr1 (111-262)||(6575261-6575414)
chr1 (243-323)||(5784870-5784950)
chr1 (243-323)||(31803703-31803783)
chr1 (258-323)||(11152553-11152618)
chr1 (258-323)||(45379093-45379158)
chr1 (243-323)||(27952503-27952583)
chr1 (9-57)||(36895308-36895356)
chr1 (117-321)||(2869589-2869797)
chr1 (117-321)||(4855873-4856080)
chr1 (117-321)||(34778045-34778252)
chr1 (258-325)||(47264130-47264197)
chr1 (258-323)||(46636773-46636838)
chr1 (243-323)||(33679267-33679347)
chr1 (243-323)||(35478095-35478175)
chr1 (258-323)||(44159312-44159377)
chr1 (9-53)||(31801916-31801960)
chr1 (263-323)||(36894830-36894890)
chr1 (117-321)||(6818584-6818792)
chr1 (258-313)||(18180518-18180573)
chr1 (117-321)||(25278274-25278482)
chr1 (9-56)||(46638604-46638651)
chr1 (21-55)||(6575448-6575482)
chr1 (243-321)||(26223597-26223675)
chr1 (243-321)||(34776579-34776657)
chr1 (243-321)||(46582020-46582098)
chr1 (244-321)||(8167952-8168029)
chr1 (117-182)||(15104594-15104659)
chr1 (134-233)||(51122007-51122106)
chr1 (243-321)||(8169569-8169647)
chr1 (243-321)||(25276752-25276830)
chr1 (243-321)||(25278989-25279067)
chr1 (243-321)||(33602680-33602758)
chr1 (243-321)||(37345963-37346041)
chr1 (243-321)||(46583592-46583670)
chr1 (134-183)||(27087434-27087483)
chr1 (21-57)||(42134759-42134795)
chr1 (261-321)||(52641898-52641958)
[»] chr4 (46 HSPs)
chr4 (98-325)||(2827413-2827641)
chr4 (105-325)||(44558387-44558611)
chr4 (105-321)||(51041825-51042044)
chr4 (105-325)||(44794654-44794878)
chr4 (116-325)||(10372611-10372824)
chr4 (105-325)||(10762587-10762811)
chr4 (111-277)||(27624860-27625030)
chr4 (105-295)||(35996099-35996293)
chr4 (105-325)||(47941817-47942041)
chr4 (105-325)||(2350398-2350625)
chr4 (117-322)||(4519385-4519594)
chr4 (243-325)||(39923010-39923092)
chr4 (243-323)||(42879283-42879363)
chr4 (258-323)||(44992816-44992881)
chr4 (243-323)||(2828414-2828494)
chr4 (243-323)||(39085155-39085235)
chr4 (243-323)||(44792942-44793022)
chr4 (258-325)||(10371063-10371130)
chr4 (258-323)||(43778397-43778462)
chr4 (1-57)||(2827683-2827739)
chr4 (243-323)||(4520454-4520534)
chr4 (243-321)||(4173741-4173819)
chr4 (263-325)||(10767973-10768035)
chr4 (243-321)||(43507177-43507255)
chr4 (243-321)||(43508654-43508732)
chr4 (243-321)||(43519434-43519512)
chr4 (243-340)||(39083630-39083727)
chr4 (243-308)||(47942749-47942814)
chr4 (117-193)||(2693159-2693235)
chr4 (243-323)||(35997770-35997850)
chr4 (212-321)||(41761747-41761860)
chr4 (243-322)||(44556629-44556708)
chr4 (243-321)||(35401759-35401837)
chr4 (243-289)||(39190822-39190868)
chr4 (245-321)||(320903-320979)
chr4 (21-57)||(27625070-27625106)
chr4 (117-233)||(51012028-51012143)
chr4 (251-294)||(230473-230516)
chr4 (21-56)||(44558300-44558335)
chr4 (243-321)||(319283-319361)
chr4 (243-325)||(32652105-32652187)
chr4 (243-325)||(39189388-39189470)
chr4 (243-321)||(39345574-39345652)
chr4 (243-325)||(39921500-39921582)
chr4 (258-308)||(51040758-51040808)
chr4 (117-182)||(11601823-11601888)
[»] chr2 (37 HSPs)
chr2 (98-334)||(29909547-29909787)
chr2 (98-325)||(39284-39515)
chr2 (98-334)||(92234-92473)
chr2 (105-336)||(37417268-37417503)
chr2 (105-325)||(15372505-15372729)
chr2 (105-325)||(25619666-25619890)
chr2 (105-325)||(42001616-42001839)
chr2 (105-325)||(15432334-15432558)
chr2 (105-325)||(41706545-41706769)
chr2 (133-325)||(42879362-42879557)
chr2 (243-323)||(11021541-11021621)
chr2 (210-325)||(39562-39681)
chr2 (243-323)||(41145-41225)
chr2 (243-323)||(28248178-28248258)
chr2 (243-323)||(33201-33281)
chr2 (1-57)||(39187-39243)
chr2 (232-323)||(361453-361544)
chr2 (117-321)||(16763086-16763293)
chr2 (1-52)||(29909451-29909502)
chr2 (258-323)||(15373906-15373971)
chr2 (243-323)||(41708433-41708513)
chr2 (117-321)||(14389010-14389218)
chr2 (243-321)||(16764612-16764690)
chr2 (258-323)||(42880829-42880894)
chr2 (9-57)||(92145-92193)
chr2 (117-181)||(10716809-10716873)
chr2 (117-294)||(19908172-19908353)
chr2 (21-57)||(25619943-25619979)
chr2 (117-321)||(17696216-17696424)
chr2 (117-321)||(39664674-39664882)
chr2 (243-321)||(14387359-14387437)
chr2 (21-53)||(42001893-42001925)
chr2 (243-294)||(24208098-24208149)
chr2 (243-325)||(11023049-11023130)
chr2 (117-182)||(6797660-6797725)
chr2 (117-178)||(11315263-11315324)
chr2 (258-323)||(37418787-37418852)
[»] chr7 (48 HSPs)
chr7 (98-325)||(46996589-46996820)
chr7 (102-323)||(33038688-33038913)
chr7 (105-325)||(47341576-47341804)
chr7 (117-325)||(23953811-23954023)
chr7 (105-325)||(40784352-40784576)
chr7 (105-325)||(46812476-46812700)
chr7 (105-325)||(8423175-8423399)
chr7 (105-340)||(35344184-35344423)
chr7 (117-295)||(2167515-2167697)
chr7 (185-323)||(38614886-38615027)
chr7 (232-325)||(38613506-38613599)
chr7 (117-339)||(2492319-2492544)
chr7 (117-323)||(27955378-27955588)
chr7 (243-323)||(4321046-4321126)
chr7 (243-323)||(30108573-30108653)
chr7 (243-323)||(46994668-46994748)
chr7 (243-323)||(3690158-3690238)
chr7 (243-323)||(8421424-8421504)
chr7 (243-323)||(45465187-45465267)
chr7 (243-323)||(46810713-46810793)
chr7 (117-321)||(39859135-39859343)
chr7 (243-321)||(33775418-33775496)
chr7 (232-284)||(11682828-11682880)
chr7 (243-323)||(47339784-47339864)
chr7 (243-321)||(27666101-27666179)
chr7 (243-321)||(35403620-35403698)
chr7 (243-323)||(35342433-35342513)
chr7 (21-57)||(47341498-47341534)
chr7 (243-321)||(56340-56418)
chr7 (243-321)||(13169684-13169762)
chr7 (243-321)||(35401979-35402057)
chr7 (134-321)||(37796104-37796295)
chr7 (243-325)||(45463676-45463758)
chr7 (258-323)||(36762698-36762763)
chr7 (246-295)||(38614798-38614847)
chr7 (258-323)||(40785566-40785631)
chr7 (21-57)||(40784626-40784662)
chr7 (117-176)||(34691133-34691192)
chr7 (117-180)||(38613618-38613681)
chr7 (243-321)||(24226591-24226669)
chr7 (20-57)||(2167753-2167790)
chr7 (258-323)||(33037701-33037766)
chr7 (117-182)||(35693276-35693341)
chr7 (117-182)||(46439436-46439501)
chr7 (243-323)||(2168837-2168917)
chr7 (332-364)||(13961763-13961795)
chr7 (21-57)||(33038614-33038650)
chr7 (21-57)||(46812391-46812427)
[»] chr8 (54 HSPs)
chr8 (98-294)||(33750271-33750471)
chr8 (104-322)||(31821427-31821640)
chr8 (105-325)||(42897668-42897892)
chr8 (105-325)||(33160042-33160266)
chr8 (105-325)||(37525917-37526141)
chr8 (105-325)||(462266-462488)
chr8 (105-325)||(32822367-32822590)
chr8 (105-325)||(1320623-1320847)
chr8 (105-325)||(31201037-31201261)
chr8 (105-325)||(38882691-38882915)
chr8 (105-340)||(8654491-8654729)
chr8 (258-323)||(31823494-31823559)
chr8 (258-323)||(33748340-33748405)
chr8 (243-316)||(24526911-24526984)
chr8 (230-323)||(25373612-25373705)
chr8 (134-323)||(9184391-9184584)
chr8 (1-57)||(33750173-33750229)
chr8 (243-323)||(40019164-40019244)
chr8 (230-323)||(25707291-25707384)
chr8 (1-57)||(31821687-31821743)
chr8 (117-321)||(8609714-8609921)
chr8 (117-321)||(13108263-13108470)
chr8 (243-321)||(27691164-27691242)
chr8 (243-323)||(461184-461264)
chr8 (152-321)||(13282488-13282660)
chr8 (243-323)||(31199493-31199573)
chr8 (258-309)||(32824289-32824340)
chr8 (250-321)||(34681074-34681145)
chr8 (117-321)||(38547238-38547445)
chr8 (243-321)||(601705-601783)
chr8 (117-285)||(5036491-5036667)
chr8 (243-321)||(26238736-26238814)
chr8 (243-321)||(27692838-27692916)
chr8 (243-325)||(28433752-28433834)
chr8 (243-321)||(29239188-29239266)
chr8 (243-321)||(33762714-33762792)
chr8 (243-321)||(38548832-38548910)
chr8 (243-321)||(42943427-42943505)
chr8 (117-182)||(9673091-9673156)
chr8 (243-320)||(13283996-13284073)
chr8 (258-323)||(38881436-38881501)
chr8 (243-308)||(42894799-42894864)
chr8 (134-182)||(11722732-11722780)
chr8 (243-319)||(13106816-13106892)
chr8 (21-57)||(32822641-32822677)
chr8 (21-57)||(33159959-33159995)
chr8 (243-294)||(15308262-15308313)
chr8 (243-294)||(15488631-15488682)
chr8 (243-289)||(1322317-1322363)
chr8 (243-321)||(29237161-29237239)
chr8 (243-321)||(33707216-33707294)
chr8 (243-321)||(33761079-33761157)
chr8 (243-321)||(35509224-35509302)
chr8 (243-323)||(33368767-33368847)
[»] chr6 (21 HSPs)
chr6 (117-316)||(3018338-3018541)
chr6 (105-325)||(29077334-29077558)
chr6 (101-325)||(2968145-2968373)
chr6 (105-325)||(4641361-4641585)
chr6 (105-325)||(29112306-29112530)
chr6 (243-325)||(17950567-17950649)
chr6 (272-325)||(3018528-3018581)
chr6 (258-323)||(30639619-30639684)
chr6 (258-325)||(29114794-29114861)
chr6 (258-323)||(35174399-35174464)
chr6 (134-294)||(32439015-32439178)
chr6 (243-321)||(32518498-32518576)
chr6 (117-182)||(11355375-11355440)
chr6 (117-323)||(20523374-20523584)
chr6 (243-319)||(13613618-13613694)
chr6 (243-325)||(17952078-17952160)
chr6 (117-182)||(7049910-7049975)
chr6 (117-323)||(10568407-10568617)
chr6 (117-233)||(6899587-6899703)
chr6 (117-181)||(14338381-14338445)
chr6 (134-178)||(24662615-24662659)
[»] scaffold0477 (1 HSPs)
scaffold0477 (105-325)||(6528-6752)
[»] scaffold1041 (1 HSPs)
scaffold1041 (230-308)||(2121-2199)
[»] scaffold0058 (3 HSPs)
scaffold0058 (243-321)||(3304-3382)
scaffold0058 (243-321)||(4476-4554)
scaffold0058 (243-321)||(14344-14422)


Alignment Details
Target: chr5 (Bit Score: 175; Significance: 4e-94; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 98 - 325
Target Start/End: Original strand, 18728489 - 18728720
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||    
T  18728489 ctcaacattttccaattcaatcaaattagtcccttaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcaaggtgacagatcagcaa 18728588  T
Q  198 ggctaacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
    ||||||||||| ||||||||||||||||||||||    |||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  18728589 ggctaacagagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccg 18728688  T
Q  294 acgtgtgaaaattcagggacgaatttgatggt 325  Q
    ||  ||||||||||||||||||||||||||||    
T  18728689 acaagtgaaaattcagggacgaatttgatggt 18728720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 98 - 325
Target Start/End: Complemental strand, 33256637 - 33256406
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||    
T  33256637 ctcaacatttttcaattcaatcaaattagtccctgaacacgtggcttccttcttgccactcgtacaagacaacacagcatgcaaggtgacagatcagcaa 33256538  T
Q  198 ggctaacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
    ||||||| |||||||||||||||||||| |||||    |||||||||| ||||||| || |||||||||||||||||||||||| ||| |||||||||||    
T  33256537 ggctaacggaggacttggacggagggacttttttgatggacgtctgacaaattcaaagattaagttgatatttcgcataattgaaggatgaagttggccg 33256438  T
Q  294 acgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||| |||||||||||||||||||||||||    
T  33256437 acgtgtaaaaattcagggacgaatttgatggt 33256406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 98 - 325
Target Start/End: Complemental strand, 32087751 - 32087520
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||| |||    
T  32087751 ctcaacattttccaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgatagatcagcaa 32087652  T
Q  198 ggctaacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
    ||||||||||| ||||||||||||||||||||||    |||||||||  |||| | |||||||||||||||||||||||||| |||||||||||||  ||    
T  32087651 ggctaacagagcacttggacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaagttgatcg 32087552  T
Q  294 acgtgtgaaaattcagggacgaatttgatggt 325  Q
    ||| ||||||||||||||||||||||||||||    
T  32087551 acgcgtgaaaattcagggacgaatttgatggt 32087520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 100 - 325
Target Start/End: Complemental strand, 35395566 - 35395339
Alignment:
Q  100 caacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaagg 199  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||||||| |||| |||| || ||    
T  35395566 caactttttccaattcaatcaaattagtccctgaacatgtggcttccttcttgccacgcgtacaagacaacac--catgcaaggcgacatatcagcatgg 35395469  T
Q  200 ctaacagaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgac 295  Q
    ||||||||| ||||||||||||||||||||||||    ||||| || |||||| | ||||| ||||||||||||||||||||||||||||||||||||||    
T  35395468 ctaacagagcacttggacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgac 35395369  T
Q  296 gtgtgaaaattcagggacgaatttgatggt 325  Q
    ||||||||||||||||| ||||||||||||    
T  35395368 gtgtgaaaattcagggatgaatttgatggt 35395339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 117 - 325
Target Start/End: Original strand, 43317966 - 43318178
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| | |||||||||||||||| |||||||  |||||||||| ||||||||||  || |||| |||  || ||||||||||| |||||||    
T  43317966 atcaaattagtccttgaacacgtggcttcctttttgccacatgtacaagacagcacaacatgctgggcgacatatcggcatggctaacagagcacttgga 43318065  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||||||||    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||  |||||||||   | |||||||| |||    
T  43318066 cggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattcaagga 43318165  T
Q  313 cgaatttgatggt 325  Q
    |||||||||||||    
T  43318166 cgaatttgatggt 43318178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 322
Target Start/End: Original strand, 38177987 - 38178208
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||| ||| |||||||| ||||||| | |||||||| ||||||| |||| ||| ||||||||||||||| |||||| |  |||| |||| || |||||||    
T  38177987 tttttcaaatcaatcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaacacagcatgcaggacgacatatcagcatggctaac 38178086  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||| || |||||| ||||||||||||    |||||||||| ||||||   ||||| |||||||||||||||||||||||| ||| ||| |||||  |||    
T  38178087 ggagcacatggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccgacccgtg 38178186  T
Q  301 aaaattcagggacgaatttgat 322  Q
    |||||| | |||||||||||||    
T  38178187 aaaatttaaggacgaatttgat 38178208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 322
Target Start/End: Original strand, 38205211 - 38205432
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||| ||| |||||||| ||||||| | |||||||| ||||||| |||| ||| ||||||||||||||| |||||| |  |||| |||| || |||||||    
T  38205211 tttttcaaatcaatcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaacacagcatgcaggacgacatatcagcatggctaac 38205310  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||| || |||||| ||||||||||||    |||||||||| ||||||   ||||| |||||||||||||||||||||||| ||| ||| |||||  |||    
T  38205311 ggagcacatggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccgacccgtg 38205410  T
Q  301 aaaattcagggacgaatttgat 322  Q
    |||||| | |||||||||||||    
T  38205411 aaaatttaaggacgaatttgat 38205432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 117 - 325
Target Start/End: Original strand, 35292288 - 35292499
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| | ||||||| |||||||| |||||||| |||||||||| |||||||||   || |||||||||  |  |||||| ||| | |||||    
T  35292288 atcaaattagtccttgaacacgtagcttcctttttgccacgtgtacaagacagcacaacatgttgggcgacagatcagaatagctaacggagcatttgga 35292387  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||| ||||||||    |||||||||| |||||| |||||||||||||||||||||||||||| ||| ||  |||||| ||   | |||||||| |||    
T  35292388 cggaggaaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgaaggatgattttggcc-acccataaaaattcaagga 35292486  T
Q  313 cgaatttgatggt 325  Q
    |||||||||||||    
T  35292487 cgaatttgatggt 35292499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 123 - 264
Target Start/End: Complemental strand, 38597157 - 38597012
Alignment:
Q  123 ttagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagg 222  Q
    ||||||| | |||||| |||||||||||||||||| ||||||||||||||| |||||| || ||||||||| || ||||||| ||  |||||||| ||||    
T  38597157 ttagtccttgaacacgcggcttccttcttgccacgtgtacaagacaacacagcatgcagggcgacagatcagcacggctaacggaacacttggacagagg 38597058  T
Q  223 gaccttttt----gacgtctgacgaattcaaggactaagttgatat 264  Q
    |||||||||    |||||||||| |||| | |||||||||||||||    
T  38597057 gacctttttgatggacgtctgacaaattaagggactaagttgatat 38597012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 38596967 - 38596874
Alignment:
Q  232 gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    ||||||| || |||||| |||||||||||||||||||||||||||||||||||| |||||||||   | |||||||| ||||||||||||||||    
T  38596967 gacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccgacccataaaaattcaaggacgaatttgatggt 38596874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 32089928 - 32090008
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||    
T  32089928 aattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatg 32090008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 33257763 - 33257843
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||| |||||||||||||||||||  || |||||||||||||||| ||||||    
T  33257763 aattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtaaaaattcagggacgaagttgatg 33257843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 40330518 - 40330598
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||| ||||||    
T  40330518 aattcagggattaaattgatatttcgcataattgagggacgattttggccgacccgtgaaaattcagggacgaagttgatg 40330598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 321
Target Start/End: Complemental strand, 17574535 - 17574328
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||| ||||  ||| ||   ||||| |||   |||||    
T  17574535 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacggagcttttgga 17574437  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||    ||||||   |||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| |||    
T  17574436 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 17574337  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  17574336 cgaatttga 17574328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 321
Target Start/End: Original strand, 36057540 - 36057727
Alignment:
Q  138 gtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagggacctttttga---- 233  Q
    |||||| |||| ||| |||| ||||| |||||||||||||||||| ||||| |||| ||    |||| |||   ||||||||||||||| ||||||        
T  36057540 gtggctgccttgttgacacgtgtacatgacaacacaacatgcaagatgacacatcatcaccattaacggagcttttggacggagggaccattttgatgga 36057639  T
Q  234 cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    ||||||   |||||| || |||| | ||||||||||| |||| ||||||||| ||||||||  | |||||||||| ||||||||||||    
T  36057640 cgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttga 36057727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 42619362 - 42619297
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||| ||||||    
T  42619362 ttgatatttcgcataattgagggacgaaattgaccgacccgtgaaaattcagggacgaagttgatg 42619297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 32835964 - 32835884
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||| ||||||||| ||| |||||  ||||||||||||||||||| ||||||    
T  32835964 aattcagggattaaattgatatttcgcataattaagggacgaatttgaccgacccgtgaaaattcagggacgaagttgatg 32835884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 35395665 - 35395609
Alignment:
Q  1 caaggacatttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||    
T  35395665 caaggacgtgtttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 35395609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 18728399 - 18728446
Alignment:
Q  9 tttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcagggg 56  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18728399 tttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcagggg 18728446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 250 - 323
Target Start/End: Complemental strand, 18726646 - 18726573
Alignment:
Q  250 ggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    ||||||| |||||||||||||||||||||||||||||||||   ||  || |||||||||||||||| ||||||    
T  18726646 ggactaaattgatatttcgcataattgagggacgaagttggggaacccgtaaaaattcagggacgaagttgatg 18726573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32087849 - 32087801
Alignment:
Q  1 caaggacatttttgatgttttgaaatgtgaagaaggaggtatgggtaat 49  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  32087849 caaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaat 32087801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 285
Target Start/End: Original strand, 30468186 - 30468358
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  |||||||| | |||| ||| |||| ||||| ||||||||||||||||||  ||||  ||| ||   ||||| |||   |||||    
T  30468186 atcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacggagcttttgga 30468285  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaa 285  Q
    |||||||||| ||||    ||||||||   |||||||||||||| | ||||||||||| ||||||| ||||||    
T  30468286 cggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaa 30468358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 321
Target Start/End: Complemental strand, 34327853 - 34327645
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||| |||||| |||||||||||  |||| |||| ||   |||||||||   |||||    
T  34327853 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacgcaacatgcaagaggacacatcatcaccactaacagagcttttgga 34327754  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    ||||| |||| ||||||    ||||||   |||||| ||||||| | ||||||||||| |||| || |||||| |||||| |  |  ||||||||| |||    
T  34327753 cggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacgaatttggccaattttagaaaattcaagga 34327654  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  34327653 cgaatttga 34327645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 32838394 - 32838467
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatg 178  Q
    |||||||| ||| |||||||| ||| | ||||||||||||||||||||| | | ||||||||||||||| ||||    
T  32838394 ttttccaaatcattcaaattattccttgaacacgtggcttccttcttgctatgtgtacaagacaacacagcatg 32838467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 316
Target Start/End: Complemental strand, 38176720 - 38176647
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaa 316  Q
    |||||| ||| ||| |||||||||||||||||| ||||||||| |||||| ||   ||||||||||||||||||    
T  38176720 aattcagggattaaattgatatttcgcataattaagggacgaatttggccaacccatgaaaattcagggacgaa 38176647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 316
Target Start/End: Complemental strand, 38203944 - 38203871
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaa 316  Q
    |||||| ||| ||| |||||||||||||||||| ||||||||| |||||| ||   ||||||||||||||||||    
T  38203944 aattcagggattaaattgatatttcgcataattaagggacgaatttggccaacccatgaaaattcagggacgaa 38203871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 33256726 - 33256683
Alignment:
Q  9 tttttgatgttttgaaatgtgaagaaggaggtatgggtaatgca 52  Q
    ||||||||||| || |||||||||||||||||||||||||||||    
T  33256726 tttttgatgttctggaatgtgaagaaggaggtatgggtaatgca 33256683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 8541272 - 8541350
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||||||||||| | ||||||||||| |||| ||||||||| ||||||||  | | ||||||||  |||||||||||    
T  8541272 aattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttga 8541350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 24541248 - 24541326
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | ||||||||  |||||||||||    
T  24541248 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttga 24541326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 35291136 - 35291064
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacga 315  Q
    |||||| ||| ||| |||||||||| |||| |||||||| ||| ||||||||   ||||||||||||||||||    
T  35291136 aattcagggattaaattgatatttcacatagttgagggatgaatttggccgaaccgtgaaaattcagggacga 35291064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 18624914 - 18625122
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  |||||||| | |||| ||| |||| ||| ||||||||||||||||||||  |||| |||| ||   ||||| |||   |||||    
T  18624914 atcaaattagtccttgtacacgtggttgccttgttgacacgtgtataagacaacacaacatgcaagaagacacatcatcactactaacggagcttttgga 18625013  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||| ||||| ||||    ||||  ||   |||||| ||||||| | |||||||| || |||| ||||||||| || || ||   ||||||||||| |||    
T  18625014 cggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacgaatttagctgatcagtgaaaattcaagga 18625113  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  18625114 cgaatttga 18625122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 24496936 - 24496792
Alignment:
Q  142 cttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagggacctttttga----cgtc 237  Q
    ||||||| ||| |||| |||| |||||||| | |||||| |  ||||||||| |||   |||||||  | ||||||||| ||||| ||||||    ||||    
T  24496936 cttccttgttgacacgtgtacgagacaacatagcatgcaggacgacagatcagcaatagtaacagaacatttggacggatggaccattttgatgaacgtc 24496837  T
Q  238 tgacgaattcaaggactaagttgatatttcgcataattgagggac 282  Q
    | || |||||| ||| ||| |||||||||| ||||||||||||||    
T  24496836 tcacaaattcagggattaatttgatatttcacataattgagggac 24496792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 2852974 - 2852896
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| | ||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  2852974 aattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttga 2852896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 7269447 - 7269525
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| || |||||  | | ||||||||  |||||||||||    
T  7269447 aattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttga 7269525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 12738737 - 12738815
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| | ||||||||||| |||| ||| ||||| ||||||||  | | |||||||| ||||||||||||    
T  12738737 aattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttga 12738815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 12801560 - 12801638
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| | ||||||||||| |||| ||| ||||| ||||||||  | | |||||||| ||||||||||||    
T  12801560 aattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttga 12801638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 30463988 - 30463910
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| | ||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  30463988 aattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttga 30463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 2180005 - 2179940
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||||||||||| |  ||| |||||| |||| ||| |||| ||||| ||||||||||||||||||    
T  2180005 atcaaattagtccttgtacatgtggctgccttgttgacacgtgtacatgacaacacaacatgcaag 2179940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 8539893 - 8539828
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||| ||||||||||||||||||    
T  8539893 atcaatttagtccttgcacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaag 8539828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 42620690 - 42620746
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacaca 173  Q
    ||||| |||||||||| ||||||||||| ||| || ||||| ||||||| |||||||    
T  42620690 atcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacaca 42620746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 6e-90; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 98 - 341
Target Start/End: Original strand, 23888659 - 23888907
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| |||    
T  23888659 ctcaacattttccaattcaatcaaattagtccctgaacatgtggcttccttcttgccacgcgtacaagacaacacagtatgcaaggcgacagatcagcaa 23888758  T
Q  198 ggctaacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
    ||||||| ||||| ||||||||||||||||||||    ||||| |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  23888759 ggctaacggaggatttggacggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccg 23888858  T
Q  294 acgtgtgaaaattcagggacgaatttgatggtcgactc-tttataaaac 341  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  23888859 acgtgtgaaaattcagggacgaatttgatggttcactcgtttataaaac 23888907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 23774381 - 23774158
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| |||||| ||||||||| | |||||||||||||||| |||||||| ||||||||||||||| |||||| || |||||||||||| |||||||    
T  23774381 ttttccaaatcaatcgaattagtccttgaacacgtggcttccttattgccacgtgtacaagacaacacatcatgcagggcgacagatcaacatggctaac 23774282  T
Q  205 agaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
    |||| |||| |||| |||||| |||||||    |||||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||||||  |||    
T  23774281 agagcacttagacg-agggacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtg 23774183  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| ||||||||||||||||    
T  23774182 aaaattcaaggacgaatttgatggt 23774158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 48634111 - 48633883
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaa----cacaacatgcaaggtgacagatcaacaaggc 200  Q
    |||| |||||||||||||||||||| | |||||||||||||||| |||||||| |||||||||||    |||| |||||| || |||||||||||| |||    
T  48634111 tttttcaattcaatcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagacaaacaacacatcatgcagggcgacagatcaacatggc 48634012  T
Q  201 taacagaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacg 296  Q
    |||| ||| ||||||||||||||||||||||||    |||||||| |||||| |||||||||||||||||||||||||||| ||||||| ||| |||||     
T  48634011 taacggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacc 48633912  T
Q  297 tgtgaaaattcagggacgaatttgatggt 325  Q
     ||||||||||| ||||||||||||||||    
T  48633911 cgtgaaaattcaaggacgaatttgatggt 48633883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 18430165 - 18430389
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||||| ||||||||||||||  |||||| || ||||  ||| || |||||||    
T  18430165 ttttccaattcaatcaaattagtccttgaacacgtggtttccttcttgccacgtgtacaagacaacacggcatgcagggcgacatgtcaccatggctaac 18430264  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||| ||||||||||||||||||||||    ||||||||||  ||||| |||||||||||||||||||||||||||||||| ||| ||||| |||  ||     
T  18430265 ggagcacttggacggagggacctttttattggacgtctgacatattcagggactaagttgatatttcgcataattgagggatgaatttggctgacccgtt 18430364  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| ||||||||||||||||    
T  18430365 aaaattcaaggacgaatttgatggt 18430389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 105 - 335
Target Start/End: Original strand, 45257114 - 45257348
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||||||||| |||||||||||||||||||||| || | ||  ||| || | |||||    
T  45257114 ttttccaattcaatcaaattagtccttgaacacgtggcttcattcttgccacgtgtacaagacaacacaacatgcagggcggcatgtcagcatgactaac 45257213  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||| |||||||||||||||| |||||    |||||||||| |||||| | |||||||||||||||  ||||||||||||| ||| |||||||||  |||    
T  45257214 ggagcacttggacggagggacattttttatggacgtctgacaaattcaggaactaagttgatattttacataattgagggatgaatttggccgacccgtg 45257313  T
Q  301 aaaattcagggacgaatttgatggtcgactcttta 335  Q
    |||||||| | ||||||||||||||  ||||||||    
T  45257314 aaaattcaagaacgaatttgatggttcactcttta 45257348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 24382787 - 24383011
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | |||||||||||||||| ||||| ||  || |||||||||||||||||| || |||| |||| || |||||||    
T  24382787 ttttccaattcaatcaaattagtccttgaacacgtggcttcctttttgccccgtatataagacaacacaacatgcagggcgacatatcagcatggctaac 24382886  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     || |||||||||||||||||||||||    |||||||||| ||| || |||||||||||||||||| ||||||||| ||| ||| |||||||||  ||     
T  24382887 ggatgacttggacggagggacctttttgatggacgtctgacaaatccatggactaagttgatatttctcataattgaaggatgaatttggccgacccgta 24382986  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| |||| |||||||||||    
T  24382987 aaaattcaaggaccaatttgatggt 24383011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 187 - 325
Target Start/End: Original strand, 45898324 - 45898466
Alignment:
Q  187 cagatcaacaaggctaacagaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggac 282  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||    |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  45898324 cagatcagcaaggctaacggaggacttggacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggac 45898423  T
Q  283 gaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
     ||||||| ||||||||||||||||||||||||||||||||||    
T  45898424 aaagttggtcgacgtgtgaaaattcagggacgaatttgatggt 45898466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 41020897 - 41021121
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| |||| ||||| ||| ||||  ||| || |||||||    
T  41020897 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacagcatgccaggcgacatgtcagcatggctaac 41020996  T
Q  205 agaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||||    |||||||| |||||| |||  || |||| |||||||||||||||||||| || |||||||||| |||    
T  41020997 ggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtg 41021096  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||||||||||||||||||||    
T  41021097 aaaattcagggacgaatttgatggt 41021121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 117 - 325
Target Start/End: Original strand, 31887358 - 31887570
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| | ||||  |||||||||| |||||||| ||||||||||||||| ||||||||| |||| |||| || ||||||| ||| |||||||    
T  31887358 atcaaattagtccttgaacatatggcttcctttttgccacgtgtacaagacaacacagcatgcaaggcgacaaatcagcatggctaacggagcacttgga 31887457  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||||||||    ||| |||||| |||||| |||||||||||||||||||||||||||| ||  ||| ||| ||||   ||||||||||| |||    
T  31887458 cggagggacctttttgatagacatctgacaaattcagggactaagttgatatttcgcataattgatggttgaatttgaccgatccgtgaaaattcaagga 31887557  T
Q  313 cgaatttgatggt 325  Q
    |||||||||||||    
T  31887558 cgaatttgatggt 31887570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 154 - 325
Target Start/End: Original strand, 40508854 - 40509029
Alignment:
Q  154 cacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagggacctttttga----cgtctgacgaattcaa 249  Q
    |||| ||||| |||||||||||||||| || ||||||||| || | ||||| ||  |||||||||||||||| |||||||    |||||||| |||||||    
T  40508854 cacgtgtacatgacaacacaacatgcagggcgacagatcagcacgactaacggaacacttggacggagggacatttttgatggacgtctgacaaattcaa 40508953  T
Q  250 ggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    ||| |||||||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||    
T  40508954 ggattaagttgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcaaggacgaatttgatggt 40509029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 33113075 - 33113298
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||| ||| ||||||||||||| | |||||||||||||||| |||||||| |||||||||| | ||||||||  || ||||||||  || |||||||    
T  33113075 ttttccacttccatcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagacagcgcaacatgctgggcgacagatcggcatggctaac 33113174  T
Q  205 agaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||  ||||| ||||||||||||||||||    |||||||| |||| | |||||||||||||||||||||||||||||||| ||  |||||||||  ||     
T  33113175 ggatcacttg-acggagggacctttttgatggacgtctgacaaatttagggactaagttgatatttcgcataattgagggatgattttggccgacccgta 33113273  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| |||| |||||||||||    
T  33113274 aaaattcaaggactaatttgatggt 33113298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 105 - 281
Target Start/End: Original strand, 33852564 - 33852744
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||  ||||||||||||||||||||| || ||||  ||| || |||||||    
T  33852564 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtctacaagacaacacaacatgcagggcgacatgtcaccatggctaac 33852663  T
Q  205 agaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgaggga 281  Q
     ||| |||||||| |||||||||||||||    |||||||  ||||||   | ||| ||||||||||||||||||||||||    
T  33852664 ggagcacttggacagagggacctttttgatggacgtctgataaattcagaaattaaattgatatttcgcataattgaggga 33852744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 51454140 - 51454368
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatc----aacaaggc 200  Q
    |||| ||||| |||| ||||||||| | |||||||||| |||||||||||||| ||| ||||||||||| |||||| || |||| ||     |||| |||    
T  51454140 tttttcaatttaatctaattagtccttgaacacgtggcctccttcttgccacgtgtataagacaacacatcatgcagggggacatatatatgaacatggc 51454239  T
Q  201 taacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacg 296  Q
    |||| ||  |||||||| ||||||| |||||    || || |||| ||||||| |||||| |||||||||||||||||||||| | ||| ||||||||      
T  51454240 taacggatcacttggacagagggacattttttatggatgtttgacaaattcaaagactaatttgatatttcgcataattgaggaatgaatttggccgatc 51454339  T
Q  297 tgtgaaaattcagggacgaatttgatggt 325  Q
     ||||||||||| ||||||||||||||||    
T  51454340 cgtgaaaattcaaggacgaatttgatggt 51454368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 118 - 276
Target Start/End: Complemental strand, 1846001 - 1845839
Alignment:
Q  118 tcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggac 217  Q
    |||||||||||| | |||||||||||||||| |||||||| ||| | |||| |||| |||||| || |||| ||||||| || |||| ||| ||||||||    
T  1846001 tcaaattagtccttgaacacgtggcttcctttttgccacgtgtataggacatcacatcatgcagggcgacatatcaacatggttaacggagcacttggac 1845902  T
Q  218 ggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattg 276  Q
    |||||||| |||||    |||||||| | ||||||| |||||||||||||||| |||||||||    
T  1845901 ggagggacgtttttgatggacgtctgtcaaattcaaagactaagttgatattttgcataattg 1845839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 142 - 325
Target Start/End: Original strand, 39641770 - 39641957
Alignment:
Q  142 cttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagggaccttttt----gacgtc 237  Q
    |||||||||| ||||  ||| |||||||||||||||||| |  |  ||||||||| ||||||| ||| ||||| ||||||||||||||||     |||||    
T  39641770 cttccttcttaccacatgtataagacaacacaacatgcaggacggtagatcaacatggctaacggagtacttgaacggagggaccttttttatgaacgtc 39641869  T
Q  238 tgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||| |||| |||||||||||||||| || | ||||||||| || ||| |||||||||  || |||||||| |||| |||||||||||    
T  39641870 tgacaaatttaaggactaagttgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacaaatttgatggt 39641957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 117 - 323
Target Start/End: Original strand, 2977235 - 2977445
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| | |||| |||| ||||||||||||||| |||  |||||||| | |||||| || |||| |||| ||  |||||| ||| ||||||     
T  2977235 atcaaattagtccttgaacatgtggtttccttcttgccacgtgtattagacaacatagcatgcagggcgacaaatcagcatcgctaacggagcacttggg 2977334  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||| ||||||||||    ||||| |||| |||| | ||||| | |||||||||||||||||| ||||| ||| ||||||||   || |||||||| |||    
T  2977335 cggatggacctttttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattcaagga 2977434  T
Q  313 cgaatttgatg 323  Q
    |||||||||||    
T  2977435 cgaatttgatg 2977445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 45898264 - 45898324
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgc 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45898264 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgc 45898324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 53190686 - 53190893
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||||||||||||| ||||  ||| ||   ||||| |||   |||||    
T  53190686 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaagg-gacacgtcatcaccactaacggagcttttgga 53190784  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||    ||||||   |||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| |||    
T  53190785 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 53190884  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  53190885 cgaatttga 53190893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 45897138 - 45897058
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||| ||||||| ||||||    
T  45897138 aattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaggacgaagttgatg 45897058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 45898166 - 45898222
Alignment:
Q  1 caaggacatttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45898166 caaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 45898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 2226079 - 2226286
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||| ||||  ||| ||   |||||||||   |||||    
T  2226079 atcaatttagtccttgtacacgtggctaccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacagagtttttgga 2226177  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||| | ||||||    ||||||   |||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| |||    
T  2226178 cggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 2226277  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  2226278 cgaatttga 2226286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 18428822 - 18428757
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||||||||||||||||||||| |||||  || |||||||||||||||| ||||||    
T  18428822 ttgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcagggacgaagttgatg 18428757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 27899007 - 27899215
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  |||| ||||| |||| ||| |||| ||||| ||||||||||||||||||  ||||  ||| ||   ||||| |||   |||||    
T  27899007 atcaaattagtccttgtacacatggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacggagcttttgga 27899106  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||    ||||||||   |||||| ||||||| | ||||||||||| |||| | ||||||| ||||||||  | | |||||||| |||    
T  27899107 cggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaagga 27899206  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  27899207 cgaatttga 27899215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 30599844 - 30600052
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| || | ||||||||||||||| ||||||||  |||| |||| ||   |||||||||   |||||    
T  30599844 atcaatttagtccttgtacacgtggctgccttattgacatgtgtacaagacaacacagcatgcaagaggacacatcatcaccactaacagagcttttgga 30599943  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||    |||||||    |||||| ||||||| | ||||||||||| |||| |||||| || ||||||||  ||| |||||| | |||    
T  30599944 cggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttgtaaaaatttaagga 30600043  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  30600044 cgaatttga 30600052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 321
Target Start/End: Complemental strand, 51684828 - 51684620
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  ||||||| || |||| ||| |||| ||||| |||||||||||| |||||  |||| |||| ||   ||||| |||   |||||    
T  51684828 atcaaattagtccttgtacacgtgtctgccttgttgacacgtgtacaggacaacacaacacgcaagaggacacatcatcaccactaacggagcttttgga 51684729  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||    ||||||   |||||||||||||| | ||||||| ||| |||| ||||| ||| ||||| ||  | |||||||||| |||    
T  51684728 cggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctgatttttgaaaattcaagga 51684629  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  51684628 cgaatttga 51684620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 33851055 - 33850990
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    ||||||||||| |||||||||||||||||||| |||||  ||||||||||||| ||||| ||||||    
T  33851055 ttgatatttcggataattgagggacgaagttgaccgacccgtgaaaattcaggaacgaaattgatg 33850990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 1847648 - 1847728
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||| |||||||||||||| ||| |||||||||  ||||||||||| |||| |||||||||    
T  1847648 aattcagggattaaattgatattttgcataattgagggatgaatttggccgacccgtgaaaattcaaggacaaatttgatg 1847728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 23887286 - 23887206
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||   | |||||||| ||||||| ||||||    
T  23887286 aattcagggattaaattgatatttcgcataattgagggacgaagttagccgacccataaaaattcaaggacgaagttgatg 23887206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 33111929 - 33111849
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||| ||| ||||   ||||||||||||||||||| ||||||    
T  33111929 aattcagggattaaattgatatttcgcataattgagggatgaatttgaccgagccgtgaaaattcagggacgaagttgatg 33111849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 40508581 - 40508501
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||| ||||||||||||| ||||||||| ||| |||||  ||||||||||||||||||| ||||||    
T  40508581 aattcagggattaaattgagatttcgcataattaagggacgaatttgtccgacccgtgaaaattcagggacgaagttgatg 40508501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 48635376 - 48635456
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||| ||||||||| ||| ||||   ||||||||||||||||||| ||||||    
T  48635376 aattcagggattaaattgatatttcgcataattaagggacgaatttgaccgatccgtgaaaattcagggacgaaattgatg 48635456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 2660300 - 2660222
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||||||||||| ||||||||||||| |||| ||||||||| |||| |||  | | |||||||| ||||||||||||    
T  2660300 aattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaattcaaggacgaatttga 2660222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 321
Target Start/End: Complemental strand, 21348924 - 21348733
Alignment:
Q  134 acacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagggacctttttga 233  Q
    |||||||||  |||| ||| |||| ||||| ||||||||||||||||||  |||| || | ||   |||||||||   ||||||||||||||| ||||||    
T  21348924 acacgtggccgccttattgacacgtgtacatgacaacacaacatgcaagaggacacattatcaccactaacagagcttttggacggagggaccattttga 21348825  T
Q  234 ----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
        ||||||   |||||| ||||||| | ||||||||||| |||| | ||||||| ||||||||  | | |||||||| |||| |||||||    
T  21348824 tggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacaaatttga 21348733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 38193511 - 38193589
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  38193511 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 38193589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 325
Target Start/End: Complemental strand, 40998583 - 40998521
Alignment:
Q  263 atttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||||||||||||||||| || ||| |||||| |||||||||||||||| || ||||||||    
T  40998583 atttcgcataattgagggactaatttgaccgacgcgtgaaaattcagggactaacttgatggt 40998521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 41979353 - 41979431
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  41979353 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 41979431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 46308895 - 46308817
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  46308895 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 46308817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 53094274 - 53094352
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  53094274 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 53094352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 24382699 - 24382735
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  24382699 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 24382735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 42279725 - 42279609
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  ||||||| || |||| ||| |||| ||| ||||||||||||||||||||  |||| |||| ||   |||||||||   |||||    
T  42279725 atcaaattagtccttgtacacgtgtctgccttgttgacacgtgtataagacaacacaacatgcaagaggacacatcatcaccactaacagagcttttgga 42279626  T
Q  217 cggagggacctttttga 233  Q
    |||||||||| ||||||    
T  42279625 cggagggaccattttga 42279609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 48830732 - 48830848
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  |||||||| | |||| ||| |||| ||||| ||||||||||||||||||  |||| |||| ||   |||||||||   |||||    
T  48830732 atcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacatcatcaccactaacagagcttttgga 48830831  T
Q  217 cggagggacctttttga 233  Q
    |||||||||| ||||||    
T  48830832 cggagggaccattttga 48830848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 23888570 - 23888617
Alignment:
Q  9 tttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcagggg 56  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  23888570 tttttgatgttctgaaatgtgaagaaagagatatgggtaatgcagggg 23888617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 321
Target Start/End: Complemental strand, 41977967 - 41977760
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  ||||||| || |||| ||| |||| ||||||||||||||||||||||||| ||||  ||| ||    ||||  ||   |||||    
T  41977967 atcaatttagtccttgtacacgtgactgccttgttgacacgtgtacaagacaacacaacatgcaagg-gacacgtcatcaccattaacgaagcttttgga 41977869  T
Q  217 cggagggacctttttgacg----tctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||||    ||||   |||||| ||||||| ||||||||||||  |||| ||||||| | ||||||||  | | |||||||| |||    
T  41977868 cggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatttggccgattttttaaaattcaagga 41977769  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  41977768 cgaatttga 41977760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 321
Target Start/End: Complemental strand, 54898654 - 54898447
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| |||||||||||| |||||||||||| ||||  ||| |    ||||| |||   |||||    
T  54898654 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacgcaacatgcaagg-gacacgtcatcgtcactaacggagcttttgga 54898556  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    ||||| |||| ||||||    ||||||   |||||| ||||||| | ||||||||||| |||| ||||||||| ||| ||||  | | |||||||| |||    
T  54898555 cggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagga 54898456  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  54898455 cgaatttga 54898447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 3150340 - 3150262
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  3150340 aattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 3150262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 7884800 - 7884866
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaagg 183  Q
    ||||| ||||||| || ||| |||||| |||| ||| |||| |||||||||||||||||||||||||    
T  7884800 atcaatttagtccttatacatgtggctgccttgttgacacgtgtacaagacaacacaacatgcaagg 7884866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 37865472 - 37865426
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttg 289  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  37865472 aattcagggattaaattgatatttcgcataattgagggacgaagttg 37865426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 54900075 - 54900153
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| |||| || ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  54900075 aattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 54900153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 317
Target Start/End: Complemental strand, 24381831 - 24381758
Alignment:
Q  244 attcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaat 317  Q
    |||||| || ||| |||||||||||||||||||||||| ||| ||||||||   || |||||||| ||||||||    
T  24381831 attcaaagattaaattgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaat 24381758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 18430085 - 18430121
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    |||||||||||||| ||||||||||||||||||||||    
T  18430085 tgaaatgtgaagaatgaggtatgggtaatgcaggggc 18430121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 51454066 - 51454102
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    ||||||||||||||||||||||| |||||||||||||    
T  51454066 tgaaatgtgaagaaggaggtatgtgtaatgcaggggc 51454102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 318
Target Start/End: Complemental strand, 31885606 - 31885531
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatt 318  Q
    |||||||| ||||| |||||||||||||||||| ||||| ||| ||| |||||  || ||||| || |||||||||    
T  31885606 aattcaagtactaaattgatatttcgcataattaagggatgaatttgaccgacccgtaaaaatccaaggacgaatt 31885531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 2661909 - 2661987
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| | ||||||| |||| |||  | | |||||||| ||||||||||||    
T  2661909 aattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttga 2661987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 38191983 - 38191905
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| |||||| |  | | |||||| | ||||||||||||    
T  38191983 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttga 38191905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 41944664 - 41944582
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||| ||||||  |||||||||||   ||||| |||||||| ||||||||    |||||||||||||||||| ||||||||    
T  41944664 aattcagggactattttgatatttcgttaaattgggggacgaatttggccgatccctgaaaattcagggacgaaattgatggt 41944582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 44794295 - 44794218
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||| ||| ||||||||  | | |||||||| ||||||||||||    
T  44794295 aattcagggactaatttgatatttcgcaaaattcagggatgaaattggccga-ttttcaaaattcaaggacgaatttga 44794218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 44795891 - 44795969
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||| ||||| || |||||  | | |||||||| ||||||||||||    
T  44795891 aattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttga 44795969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 46310437 - 46310515
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | ||||||||  |||||||||||    
T  46310437 aattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttga 46310515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 53187830 - 53187752
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| |||| |||||||    
T  53187830 aattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttga 53187752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 23293096 - 23293161
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||| ||||||||||||||||||    
T  23293096 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaag 23293161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 17515528 - 17515464
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaa 181  Q
    ||||| ||||||| |  |||||||||| |||| ||| || | |||||||||||||||||||||||    
T  17515528 atcaatttagtccttgtacacgtggctgccttattgacaagtgtacaagacaacacaacatgcaa 17515464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 23291650 - 23291582
Alignment:
Q  251 gactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaattt 319  Q
    |||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||    
T  23291650 gactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaattt 23291582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 98 - 325
Target Start/End: Original strand, 46638694 - 46638925
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||     
T  46638694 ctcaacattttccaattcaatcaaattcgtccctgaacacgtggcttcctttttgccacgcgtacaagacaacacaacatgcaaggcgacagatcagcat 46638793  T
Q  198 ggctaacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
    ||||||| ||| ||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46638794 ggctaacggagcacttggacggagggacctttttggtggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggatgaagttggccg 46638893  T
Q  294 acgtgtgaaaattcagggacgaatttgatggt 325  Q
    ||| ||||||||||||| ||||||||||||||    
T  46638894 acgcgtgaaaattcaggaacgaatttgatggt 46638925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 98 - 325
Target Start/End: Original strand, 36895397 - 36895628
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||     
T  36895397 ctcaacattttccaattcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcagcat 36895496  T
Q  198 ggctaacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
    ||||||| ||| ||||||||| ||||||||||||    |||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||    
T  36895497 ggctaacggagcacttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaagttgaccg 36895596  T
Q  294 acgtgtgaaaattcagggacgaatttgatggt 325  Q
    ||| |||||||||||||||| |||||||||||    
T  36895597 acgcgtgaaaattcagggacaaatttgatggt 36895628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 98 - 340
Target Start/End: Complemental strand, 31801870 - 31801624
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    ||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||  |||| |||| ||     
T  31801870 ctcaacattttccaattcaatcaaattcgtccctgaacacgtgacttccttcttgccacgcgtacaagacaacacaacatgcaagacgacaaatcagcat 31801771  T
Q  198 ggctaacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
    ||||||| ||| ||||||||||||||||||||||    ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  31801770 ggctaacggagcacttggacggagggacctttttgatggacgtctcacaaatttaaggactaagttgatatttcgcataattgagggacgaagttgaccg 31801671  T
Q  294 acgtgtgaaaattcagggacgaatttgatggtcgactctttataaaa 340  Q
    ||||||||||||| ||||||||||||||| ||  ||||| |||||||    
T  31801670 acgtgtgaaaatttagggacgaatttgattgtttactctatataaaa 31801624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 42134712 - 42134488
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||| ||||||||||||||| |||||| |||||||  |||||| |||||||    
T  42134712 ttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggtgacatgtcaacatggctaac 42134613  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||| ||||||||||||||||||||||    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||  |||||||||  ||     
T  42134612 ggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgta 42134513  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| ||||||||||||||||    
T  42134512 aaaattcaaggacgaatttgatggt 42134488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 35479870 - 35480093
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| | |||||| || ||||||||| | | ||||||    
T  35479870 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttcttgccacgcgtacaagacaacaaagcatgcatggcgacagatcagc-atgctaac 35479968  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
    |||| ||||||||||| ||||||||||    |||||||||| ||||||  || |||||||||||||||||||||||||||| ||| ||||| ||   |||    
T  35479969 agagcacttggacggaaggacctttttgatggacgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctgatccgtg 35480068  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| ||||||| ||||||||    
T  35480069 aaaattcaaggacgaagttgatggt 35480093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 27940838 - 27940614
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||| |||  ||| || |||||||    
T  27940838 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacatcatgcaaggttacatgtcagcatggctaac 27940739  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||    |||||||||  |||||||||| ||| |||||||||||||||||||||||||||| ||| || || ||||    
T  27940738 ggagcccgttaacggagggacctttttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacgaatttgaccaacctgtg 27940639  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    ||||||||||||| || ||||||||    
T  27940638 aaaattcagggactaaattgatggt 27940614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 105 - 281
Target Start/End: Original strand, 45380878 - 45381058
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||| |||||| || ||||  ||| || |||||||    
T  45380878 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcgacatgtcaccatggctaac 45380977  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgaggga 281  Q
     ||| ||||||||||||| ||||||||    |||||||||| |||||| | ||||||||||||||||||||||||||||||    
T  45380978 ggagcacttggacggaggaacctttttgatggacgtctgacaaattcatgaactaagttgatatttcgcataattgaggga 45381058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 33685143 - 33685366
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||| || |||| |||  || |||||||    
T  33685143 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaactcaacatgcagggcgacacatcggcatggctaac 33685242  T
Q  205 agaggacttggacggagggaccttt---ttgacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtga 301  Q
     ||| ||||||| ||||||| ||||   | ||  | |||| ||||||| || ||| |||||||||||||||||||||||| ||| ||| |||||  || |    
T  33685243 ggagcacttggatggagggatcttttgatggagatgtgacaaattcaatgattaaattgatatttcgcataattgagggatgaatttgaccgacccgtaa 33685342  T
Q  302 aaattcagggacgaatttgatggt 325  Q
    ||||||||||||||||||||||||    
T  33685343 aaattcagggacgaatttgatggt 33685366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 44157662 - 44157439
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||  |||  | |||| ||    
T  44157662 ttttccaattcaatcaaattagtct-tgaacacgtggcttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcactatggctgac 44157564  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||| |||| |||||| |||| |||||    ||||||| || |||||| ||||||||||||||||| |||||||||||||| ||| |||||||||  |||    
T  44157563 ggagcacttagacggaaggactttttttatggacgtctaacaaattcagggactaagttgatattttgcataattgagggatgaatttggccgacccgtg 44157464  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||| | |||||| |||||||||    
T  44157463 aaaatttaaggacgagtttgatggt 44157439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 47269350 - 47269574
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| |||| ||||| ||  ||||  ||| || |||||||    
T  47269350 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacaccatgccagacgacatgtcagcatggctaac 47269449  T
Q  205 agaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||||    ||| |||| |||||| |||  || |||| |||||| ||||||||||||| || |||||||||| |||    
T  47269450 ggagcccgttaacggagggacctttttgatggacgtttgacaaattcagggatgaaattgaaatttcgtataattgagggactaatttggccgacgcgtg 47269549  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||||||||||||||||||||    
T  47269550 aaaattcagggacgaatttgatggt 47269574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 18183838 - 18184061
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||| ||| ||||||||||||| | ||||||||||||| || |||||||| |||||||||||||||||||||  |  |||| |||| || |||||||    
T  18183838 ttttccacttccatcaaattagtccttgaacacgtggcttcttttttgccacgtgtacaagacaacacaacatgctggacgacaaatcagcatggctaac 18183937  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||| |||| || | |||||| |||||    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||  ||||||||   ||     
T  18183938 ggagcactt-gatgaagggacatttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgaaccgta 18184036  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    ||||||||  |||||||||||||||    
T  18184037 aaaattcaaagacgaatttgatggt 18184061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 111 - 262
Target Start/End: Complemental strand, 6575414 - 6575261
Alignment:
Q  111 aattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagagga 210  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||| |  |||| |||| || |||  |||||| |    
T  6575414 aattcaatcaaattagtccttgaacacgtggcttccttcttgccacgcgtacaagacaacaaagcatgcatgacgacatatcagcatggc--acagagca 6575317  T
Q  211 cttggacggagggacctttttgac----gtctgacgaattcaaggactaagttgat 262  Q
    ||| |||||| ||||||||||||     ||||||| |||||| |||||||||||||    
T  6575316 ctttgacggaaggacctttttgatagatgtctgacaaattcagggactaagttgat 6575261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 5784870 - 5784950
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||||    
T  5784870 aattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtgaaaattcagggacgaagttgatg 5784950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 31803703 - 31803783
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||    
T  31803703 aattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatg 31803783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 11152618 - 11152553
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||    
T  11152618 ttgatatttcgcataattgagggacgaaattggccgacccgtgaaaattcagggacgaagttgatg 11152553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 45379158 - 45379093
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||    
T  45379158 ttgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatg 45379093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 27952503 - 27952583
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  |||| ||||||||||| || ||||||    
T  27952503 aattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatg 27952583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 36895308 - 36895356
Alignment:
Q  9 tttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36895308 tttttgatgttgtgaaatgtgaagaaggaggtatgggtaatgcaggggc 36895356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 321
Target Start/End: Complemental strand, 2869797 - 2869589
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  ||| |||||| |||| ||| |||| ||||| ||||||||| |||||||| ||||| |||| ||   |||||||||   |||||    
T  2869797 atcaatttagtccttgtacatgtggctgccttgttgacacgtgtacaggacaacacatcatgcaagatgacacatcatcaccactaacagagcttttgga 2869698  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||    ||||||||   |||| |  |||||| | ||||||||||| |||| ||||||||| ||| ||||  | |||||||||| |||    
T  2869697 cggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttgaaaattcaagga 2869598  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  2869597 cgaatttga 2869589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 4855873 - 4856080
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  ||||||| || |||| ||| |||| ||||||||||||||||||||||||| ||||  ||| ||    |||| |||   |||||    
T  4855873 atcaatttagtccttgtacacgtgactgccttgttgacacgtgtacaagacaacacaacatgcaagg-gacacgtcatcaccattaacggagcttttgga 4855971  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||    ||||||   |||||| ||||||| ||||||||||||| |||| ||||||| | ||||||||  | | |||||||| |||    
T  4855972 cggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaagga 4856071  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  4856072 cgaatttga 4856080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 34778045 - 34778252
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| |||||||||||||||| |||||||| ||||  ||| ||   ||||| |||   |||||    
T  34778045 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaatatgcaagg-gacacgtcatcaccactaacggagcttttgga 34778143  T
Q  217 cggagggacctttttgacg----tctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| |||||| |    ||||   |||||| ||||||| ||||||||||||| |||| ||||||| | ||||||||  | | |||||||| |||    
T  34778144 cggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaagga 34778243  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  34778244 cgaatttga 34778252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 47264197 - 47264130
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||| |||||||||||||||||||| || |||||||||| |||||||||||||||| || ||||||||    
T  47264197 ttgaaatttcgcataattgagggactaaattggccgacgcgtgaaaattcagggactaacttgatggt 47264130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 46636838 - 46636773
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||||||||| |||||||||| ||||||  |||||||||||| |||||| ||||||    
T  46636838 ttgatatttcgcataattgaaggacgaagttagccgacccgtgaaaattcagagacgaagttgatg 46636773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 33679347 - 33679267
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||| ||| |||||||||||||||||||||||||||| ||||| |||  || |||||||| |||| || ||||||    
T  33679347 aattcaaggattaaattgatatttcgcataattgagggacgaatttggctgacccgtaaaaattcatggacaaaattgatg 33679267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 35478175 - 35478095
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||| ||||||||||||||| || |||||||||  ||||||||||||||| ||| ||||||    
T  35478175 aattcagggattaaattgatattttgcataattgagggactaatttggccgacccgtgaaaattcagggatgaagttgatg 35478095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 44159312 - 44159377
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    ||||||||| |||||||| ||||||||| ||| ||||  |||||||||||||||||||| ||||||    
T  44159312 ttgatattttgcataattaagggacgaaattgaccgatctgtgaaaattcagggacgaagttgatg 44159377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 31801960 - 31801916
Alignment:
Q  9 tttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcag 53  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  31801960 tttttgatgttctgaaatgtgaagaagtaggtatgggtaatgcag 31801916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 323
Target Start/End: Complemental strand, 36894890 - 36894830
Alignment:
Q  263 atttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||||  ||||||||||||||||  || |||||||||||||||| ||||||    
T  36894890 atttcgcataattgaatgacgaagttggccgacccgtaaaaattcagggacgaagttgatg 36894830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 6818584 - 6818792
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  |||||||||| |||| ||| |||| ||||| ||||||||||||||||||  ||||  ||| ||   ||||| |||   |||||    
T  6818584 atcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacatgtcatcaccactaacggagcttttgga 6818683  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||    ||||||||   |||||| ||||||| | ||||||| ||  |||  ||||||||  ||||||||  | | |||||||| |||    
T  6818684 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagtttggccgattttttaaaattcaagga 6818783  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  6818784 cgaatttga 6818792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 18180573 - 18180518
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggac 313  Q
    |||||||||||||||||||||||| ||| ||||||||   ||||||||||||||||    
T  18180573 ttgatatttcgcataattgagggatgaatttggccgagtcgtgaaaattcagggac 18180518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 25278274 - 25278482
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| || |||||||||| |||| ||| |||| ||||| |||| |||| ||||||||  ||||  ||| ||   ||||| |||   |||||    
T  25278274 atcaatttagtccttatacacgtggctgccttgttgacacgtgtacatgacagcacatcatgcaagaggacacgtcatcaccactaacggagcttttgga 25278373  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||    ||| ||   |||||||||||||| | | ||||||||| |||| ||||||||| ||| ||||  | | |||||||| |||    
T  25278374 cggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagga 25278473  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  25278474 cgaatttga 25278482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 46638604 - 46638651
Alignment:
Q  9 tttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcagggg 56  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  46638604 tttttgatgttctgaaatgtgaagaaggagttatggataatgcagggg 46638651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 6575482 - 6575448
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggg 55  Q
    |||||||||||||||||||||||||||||||||||    
T  6575482 tgaaatgtgaagaaggaggtatgggtaatgcaggg 6575448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 26223675 - 26223597
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  26223675 aattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 26223597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 34776657 - 34776579
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  34776657 aattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 34776579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 46582098 - 46582020
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| |||| |||||||    
T  46582098 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttga 46582020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 8168029 - 8167952
Alignment:
Q  244 attcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    ||||| ||||||| ||||||||||||| |||| || |||||| ||||||||  | | |||||||| ||||||||||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttga 8167952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 15104659 - 15104594
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||||||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||    
T  15104659 atcaaattagtccttgtacacgtggctgccttattgacacgtgtacaagacaacacagcatgcaag 15104594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 233
Target Start/End: Complemental strand, 51122106 - 51122007
Alignment:
Q  134 acacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagggacctttttga 233  Q
    ||||||| ||||||| ||| |||| ||||| |||||||||||||||| || | ||| ||||||   ||||||||    ||||||||||||||| ||||||    
T  51122106 acacgtgacttcctttttgacacgtgtacatgacaacacaacatgcagggagccagctcaacatcactaacagaccttttggacggagggaccattttga 51122007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 8169569 - 8169647
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||| | | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  8169569 aattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 8169647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 25276830 - 25276752
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| | ||| ||| ||||||||  | | |||||||| ||||||||||||    
T  25276830 aattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttga 25276752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 25278989 - 25279067
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| | ||||||||||| |||| ||| ||||| ||||| ||  | |||||||||| ||||||||||||    
T  25278989 aattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttga 25279067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 33602680 - 33602758
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| |||||||||| || |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  33602680 aattcagggactaatttgatatttcacaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 33602758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 37345963 - 37346041
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||| ||| |||| |||  | | |||||||| ||||||||||||    
T  37345963 aattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttga 37346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 46583592 - 46583670
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| |||||| || ||| ||||  | | |||||||| ||||||||||||    
T  46583592 aattcagggactaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttga 46583670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 27087483 - 27087434
Alignment:
Q  134 acacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaagg 183  Q
    |||||||||| |||| ||| |||| ||||||||||||||| |||||||||    
T  27087483 acacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagg 27087434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 42134795 - 42134759
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    |||||||||||||| |||||||||||||||| |||||    
T  42134795 tgaaatgtgaagaaagaggtatgggtaatgccggggc 42134759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 52641958 - 52641898
Alignment:
Q  261 atatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||||||| |||| ||||||||| ||||| ||  | |||||||||| ||||||||||||    
T  52641958 atatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttga 52641898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 161; Significance: 8e-86; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 98 - 325
Target Start/End: Complemental strand, 2827641 - 2827413
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| |||    
T  2827641 ctcaacatttttcaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacatcatgcaagacgacagatcagcaa 2827542  T
Q  198 ggctaacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
    ||||||| ||||||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||| ||||||||||||||   ||||||||    
T  2827541 ggctaacggaggacttggacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggac---gttggccg 2827445  T
Q  294 acgtgtgaaaattcagggacgaatttgatggt 325  Q
    ||||||||||||| ||||||||||||||||||    
T  2827444 acgtgtgaaaatttagggacgaatttgatggt 2827413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 44558387 - 44558611
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| || |||||||    
T  44558387 ttttcaaattcaatcaaatgagtccttgaacacgtggcttccttcttgccacgcgtacaagacaacagagcatgcatggtgacagatcagcatggctaac 44558486  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
    | || ||||||||||| ||||||||||    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||  |||    
T  44558487 atagcacttggacggaaggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtg 44558586  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| ||||||| ||||||||    
T  44558587 aaaattcaaggacgaagttgatggt 44558611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 105 - 321
Target Start/End: Original strand, 51041825 - 51042044
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||| ||| |||||||||||||||||| || ||||||||| || |||||||    
T  51041825 ttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaacacaacatgcagggcgacagatcagcatggctaac 51041924  T
Q  205 agaggacttggacggagggacctttt---tgacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtga 301  Q
    | || ||||||| |||||||||||||   ||||||||||| |||||| |||||||||||||||||| ||||||||||||| ||| ||| ||||| ||| |    
T  51041925 aaagcacttggatggagggacctttttgatgacgtctgacaaattcatggactaagttgatatttcacataattgagggatgaatttgaccgacctgtaa 51042024  T
Q  302 aaattcagggacgaatttga 321  Q
    ||||| | ||||||||||||    
T  51042025 aaatttaaggacgaatttga 51042044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 44794654 - 44794878
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||  ||| || |||||||    
T  44794654 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacatcacagcatgcaaggcgacatgtcagcatggctaac 44794753  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||    |||||||||  |||||| ||| ||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  44794754 ggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacgtgtg 44794853  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    ||||||||||||| || ||||||||    
T  44794854 aaaattcagggactaaattgatggt 44794878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 116 - 325
Target Start/End: Original strand, 10372611 - 10372824
Alignment:
Q  116 aatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgg 215  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||  ||| || ||||||| |||  | |      
T  10372611 aatcaaattcgtccctgaacacgtggcttctttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatggctaacggagtccgtta 10372710  T
Q  216 acggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggg 311  Q
    ||||||||||||||||||    |||||||| |||||| |||  || ||||||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  10372711 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 10372810  T
Q  312 acgaatttgatggt 325  Q
    ||||||||||||||    
T  10372811 acgaatttgatggt 10372824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 10762811 - 10762587
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| |||| ||||| ||| ||||  ||| || |||||||    
T  10762811 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacagcatgccaggcgacatgtcagcatggctaac 10762712  T
Q  205 agaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||||    |||||||| |||||| |||  || |||| |||||||||||||||||||| || |||||||||| |||    
T  10762711 ggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtg 10762612  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||||||||||||||||||||    
T  10762611 aaaattcagggacgaatttgatggt 10762587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 27625030 - 27624860
Alignment:
Q  111 aattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagagga 210  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| | |||||| || |||||||||||| ||||||||||| |    
T  27625030 aattcaatcaaattagtccttgaacacgtggcttccttcttgccacacgtacaagacaacaaagcatgcatggcgacagatcaacatggctaacagagca 27624931  T
Q  211 cttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattga 277  Q
    ||| ||||||  |||||||||    |||||||||| |||||| ||||||||||||||||||||||||||||    
T  27624930 ctttgacggaatgacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattga 27624860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 105 - 295
Target Start/End: Complemental strand, 35996293 - 35996099
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||  ||| || |||||||    
T  35996293 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacaacatgcatggcgacatgtcagcatggctaac 35996194  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgac 295  Q
     ||| ||||||||||||||||||||||    |||||||||  |||||| ||| ||| ||||||||| ||| |||||||||||||| ||| |||||    
T  35996193 ggagcacttggacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacgaatttgaccgac 35996099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 47942041 - 47941817
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||| || |||||||    
T  47942041 ttttccaaatcaatcaaattcgtccttgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcatggctaac 47941942  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||    |||||||||  |||||| ||| ||| ||||||||||||||||||||| |||||| ||| |||||  ||     
T  47941941 ggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaatttgaccgacccgta 47941842  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    ||||||||||||| || ||||||||    
T  47941841 aaaattcagggactaaattgatggt 47941817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 2350398 - 2350625
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaag---acaacacaacatgcaaggtgacagatcaacaaggct 201  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||   |||||||| ||||||  | ||||  ||| || ||||    
T  2350398 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagagtacaacacagcatgcagagcgacatgtcagcatggct 2350497  T
Q  202 aacagaggacttggacggagggacctttttg----acgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgt 297  Q
    ||| ||| |||||||| ||||||||||||||    ||||||||  ||||||  || ||| ||||||||||||||||||||||||| || |||||||||      
T  2350498 aacggagcacttggacagagggacctttttgatgaacgtctgataaattcagagattaaattgatatttcgcataattgagggacaaatttggccgaccc 2350597  T
Q  298 gtgaaaattcagggacgaatttgatggt 325  Q
     ||||||||||||||| || ||||||||    
T  2350598 atgaaaattcagggactaaattgatggt 2350625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 117 - 322
Target Start/End: Complemental strand, 4519594 - 4519385
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| | |||||||| ||| ||| |||||||| ||||||||||||||| |||||| || ||||||||| || ||||||| ||| | |||||    
T  4519594 atcaaattagtccttgaacacgtgactttctttttgccacgtgtacaagacaacacagcatgcagggcgacagatcagcatggctaacggagcatttgga 4519495  T
Q  217 cggagggacctttttgacg----tctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    ||||||||||||||||| |    ||| || ||||||| | ||||| ||||||||||||||||||||||| ||| |||||| ||  || |||||||| |||    
T  4519494 cggagggacctttttgatgaatgtctaacaaattcaaaggctaagctgatatttcgcataattgagggatgaatttggccaaccggtaaaaattcaagga 4519395  T
Q  313 cgaatttgat 322  Q
    ||||||||||    
T  4519394 cgaatttgat 4519385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 243 - 325
Target Start/End: Original strand, 39923010 - 39923092
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  39923010 aattcagggattaaattgatatttcgcataattgagggacgaagttggccgacctgtaaaaattcagggacgaaattgatggt 39923092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 42879363 - 42879283
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||    
T  42879363 aattcatggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatg 42879283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 44992881 - 44992816
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||    
T  44992881 ttgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatg 44992816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 2828414 - 2828494
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||| ||| ||||||||||||||||||||||||| ||||||||||||   | |||||||||||||||| ||||||    
T  2828414 aattcaaggattaaattgatatttcgcataattgagggacaaagttggccgacccataaaaattcagggacgaagttgatg 2828494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 39085155 - 39085235
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||||| |||||  || |||||||||||||||| ||||||    
T  39085155 aattcatggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcagggacgaagttgatg 39085235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 44793022 - 44792942
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  |||| ||||||||||| || ||||||    
T  44793022 aattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatg 44792942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 10371130 - 10371063
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    ||||||||||||||||||||||||| || || ||||||| |||||||||||||||| || ||||||||    
T  10371130 ttgatatttcgcataattgagggactaatttagccgacgcgtgaaaattcagggactaagttgatggt 10371063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 43778462 - 43778397
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||||||||||||||||||||| |||||  || |||||||| ||||||| ||||||    
T  43778462 ttgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcaaggacgaagttgatg 43778397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2827739 - 2827683
Alignment:
Q  1 caaggacatttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    ||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||    
T  2827739 caaggacgtttttgattttctgaaatgtggagaaggaggtatgggtaatgcaggggc 2827683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 4520454 - 4520534
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||| |||||||||||||||||||||||||| ||| ||| |||||||||   | |||||||| ||||||| ||||||    
T  4520454 aattcaagaactaagttgatatttcgcataattgatggatgaatttggccgactcataaaaattcaaggacgaagttgatg 4520534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 4173741 - 4173819
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  4173741 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 4173819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 10767973 - 10768035
Alignment:
Q  263 atttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||||||||||||||||| || |||||||||| ||||||||||||| || || ||||||||    
T  10767973 atttcgcataattgagggactaatttggccgacgcgtgaaaattcaggaactaacttgatggt 10768035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 43507255 - 43507177
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  43507255 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 43507177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 43508654 - 43508732
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  43508654 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 43508732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 43519512 - 43519434
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  43519512 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 43519434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 340
Target Start/End: Complemental strand, 39083727 - 39083630
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggtcgactctttataaaa 340  Q
    |||||| ||||||  |||||||||||   |||| ||||||||| |||||||||   |||||||||||||||||| ||||||||  |||| ||||||||    
T  39083727 aattcagggactattttgatatttcgttaaatttagggacgaatttggccgacccctgaaaattcagggacgaaattgatggttcactcattataaaa 39083630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 47942749 - 47942814
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattca 308  Q
    |||||||||| ||| |||||||||||||||||||||||||||| ||| |||||  |||| ||||||    
T  47942749 aattcaaggattaaattgatatttcgcataattgagggacgaatttgaccgacccgtgataattca 47942814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 2693159 - 2693235
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatca 193  Q
    ||||||||||||| |  |||||||||| |||||||| |||| ||||| ||||||||| |||||||| ||||| ||||    
T  2693159 atcaaattagtccttgtacacgtggctgccttcttgacacgtgtacaggacaacacagcatgcaagatgacacatca 2693235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 35997770 - 35997850
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||||  |||||||||| ||||| |||||||||  |||||||||||||||| || ||||||    
T  35997770 aattcagggattaaattgatatttcttataattgaggaacgaatttggccgacccgtgaaaattcagggacaaagttgatg 35997850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 41761747 - 41761860
Alignment:
Q  212 ttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 307  Q
    ||||||||||||||| ||||||    ||||||   |||||| ||||||| | ||||||||||| ||||  |||||||| ||||||||  | |||||||||    
T  41761747 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacgaatttggccgatttttgaaaattc 41761846  T
Q  308 agggacgaatttga 321  Q
    | ||||||||||||    
T  41761847 aaggacgaatttga 41761860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 44556708 - 44556629
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgat 322  Q
    |||||| ||||||| |||||||||| |||||||||||||| || ||| |||||  || ||||||||||||| || |||||    
T  44556708 aattcatggactaaattgatatttcacataattgagggactaatttgaccgacccgtaaaaattcagggacaaagttgat 44556629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 35401837 - 35401759
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||||||||||| | |||||||| || |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  35401837 aattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 35401759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 39190822 - 39190868
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttg 289  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  39190822 aattcacggattaaattgatatttcgcataattgagggacgaagttg 39190868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 320903 - 320979
Alignment:
Q  245 ttcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||||||||| ||||||||||||| |||| | ||| ||| ||||||||  | | |||||||| ||||||||||||    
T  320903 ttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttga 320979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 27625106 - 27625070
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    |||||| ||||||||||||||||||||||||||||||    
T  27625106 tgaaatctgaagaaggaggtatgggtaatgcaggggc 27625070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 51012143 - 51012028
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||| ||||  ||| ||   |||||||||   |||||    
T  51012143 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaagg-gacacgtcatcactactaacagagcttttgga 51012045  T
Q  217 cggagggacctttttga 233  Q
    |||||||||| ||||||    
T  51012044 cggagggaccattttga 51012028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 230516 - 230473
Alignment:
Q  251 gactaagttgatatttcgcataattgagggacgaagttggccga 294  Q
    |||||| |||||||||||||||||||||||||||  ||||||||    
T  230516 gactaatttgatatttcgcataattgagggacgattttggccga 230473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 44558300 - 44558335
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcagggg 56  Q
    |||||||| |||||||||||||||||||||||||||    
T  44558300 tgaaatgtaaagaaggaggtatgggtaatgcagggg 44558335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 319361 - 319283
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| | ||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  319361 aattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 319283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 32652187 - 32652105
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||||||||||  |||||||||||   ||||| |||||||| ||||||||    ||||||||||| |||||| ||||||||    
T  32652187 aattcaaggactattttgatatttcgttaaattgggggacgaatttggccgaaccctgaaaattcagtgacgaaattgatggt 32652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 39189470 - 39189388
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||| ||||||  |||||||||||   ||||  |||||||| |||||||||   |||||||||||||||||| ||||||||    
T  39189470 aattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 39189388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 39345652 - 39345574
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| | | ||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  39345652 aattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 39921582 - 39921500
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||| ||||||  |||||||||||   ||||  |||||||| |||||||||   |||||||||||||||||| ||||||||    
T  39921582 aattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 39921500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 51040808 - 51040758
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattca 308  Q
    |||||||||||||||||||| ||| ||| |||||||||  |||||||||||    
T  51040808 ttgatatttcgcataattgaaggatgaatttggccgacccgtgaaaattca 51040758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 11601888 - 11601823
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||||||||||| || |||||||  | |||||||| |||| ||||| |||||||||||| |||||    
T  11601888 atcaaattagtccttatacacgtgattgccttcttgacacgtgtacatgacaacacaacacgcaag 11601823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 160; Significance: 3e-85; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 98 - 334
Target Start/End: Original strand, 29909547 - 29909787
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||     
T  29909547 ctcaactttttcaaattcaatcaaattagtcccttaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaacgcgacagatcaacat 29909646  T
Q  198 ggctaacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
    ||||||||||| ||||||||||||||||||||||    |||||||||| |||| | ||||||| ||||||||||||||||||||||||| ||||||||||    
T  29909647 ggctaacagagcacttggacggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgagggacaaagttggccg 29909746  T
Q  294 acgtgtgaaaattcagggacgaatttgatggtcgactcttt 334  Q
    ||| |||||||||||||||| |||||||||||  |||||||    
T  29909747 acgcgtgaaaattcagggacaaatttgatggttcactcttt 29909787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 98 - 325
Target Start/End: Original strand, 39284 - 39515
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  |||| |||| ||     
T  39284 ctcaacattttccaattcaatcaaatttgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacatatcagcat 39383  T
Q  198 ggctaacagaggacttggacggagggacctttttg----acgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
    ||||||| ||  |||||||||| ||||||||||||    ||||||||| |||||| |||||||||||||||||||||||||||||| || |||||||| |    
T  39384 ggctaacggaacacttggacggggggacctttttgatgaacgtctgacaaattcagggactaagttgatatttcgcataattgaggtacaaagttggctg 39483  T
Q  294 acgtgtgaaaattcagggacgaatttgatggt 325  Q
    ||| |||||||||| ||||| |||||||||||    
T  39484 acgcgtgaaaattcggggacaaatttgatggt 39515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 98 - 334
Target Start/End: Original strand, 92234 - 92473
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||  |||| |||| ||     
T  92234 ctcaacattttccaattcaatcaaatttgtccctgaacacgtggcttccttcttgccacacgtacaagacaacacagcatgcaagacgacatatcagcat 92333  T
Q  198 ggctaacagaggacttggacggagggacctttttg----acgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
    ||||||| ||| |||||||| ||||||||||||||    ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | |    
T  92334 ggctaacggagcacttggactgagggacctttttgatgaacgtctgacaaattcaaagactaagttgatatttcgcataattgaggtacgaagttgactg 92433  T
Q  294 acgtgtgaaaattcagggacgaatttgatggtcgactcttt 334  Q
    | | |||||||||||||||| |||||||||||  |||||||    
T  92434 atgcgtgaaaattcagggac-aatttgatggttcactcttt 92473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 105 - 336
Target Start/End: Complemental strand, 37417503 - 37417268
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||| |||||||||| | ||||||||||||||||||||||||| ||||||||||||||| |||||| ||  |||||||| || |||||||    
T  37417503 ttttccaaatcaattaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcaacagatcagcatggctaac 37417404  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||| ||||||||| ||||||||||||    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||   ||    
T  37417403 ggagcacttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccatg 37417304  T
Q  301 aaaattcagggacgaatttgatggtcgactctttat 336  Q
    |||||||| |||||||| |||||||  |||||||||    
T  37417303 aaaattcaaggacgaatatgatggttcactctttat 37417268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 15372729 - 15372505
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  | | || |||||||    
T  15372729 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgttagcatggctaac 15372630  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||    |||||||||  |||||| ||| ||| ||||||||| ||||||||||||| |||| |||||||||  |||    
T  15372629 ggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcataattgaggggcgaatttggccgacccgtg 15372530  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    ||||||||||||| || ||||||||    
T  15372529 aaaattcagggactaaattgatggt 15372505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 25619890 - 25619666
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||| |||||||||||||||||||| | |||| |||||||| ||||||||||| ||| |||||||| |||||||||  | |||||||||||| |||||||    
T  25619890 tttttcaattcaatcaaattagtccttgaacatgtggcttctttcttgccacgtgtataagacaacgcaacatgcagagcgacagatcaacatggctaac 25619791  T
Q  205 agaggacttggacggagggacctttttgacg----tctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||| ||||||| |||||||||||||||| |    | |||| |||||| ||||||||||||||||| |||||||||||||| ||| ||| |||||   |     
T  25619790 ggagcacttggatggagggacctttttgatggacatatgacaaattcagggactaagttgatattttgcataattgagggatgaatttgaccgacccata 25619691  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| ||||||||||||||||    
T  25619690 aaaattcaaggacgaatttgatggt 25619666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 42001839 - 42001616
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||| ||||| | |||||||| ||||||||||| |||| |||||||||||| ||||||||| || |||| ||||||| |||||||    
T  42001839 ttttccaattcaatcaaatcagtccttgaacacgtgacttccttcttgtcacgtgtacaagacaactcaacatgcagggcgacacatcaacatggctaac 42001740  T
Q  205 agaggacttggacggagggacctttt---tgacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtga 301  Q
      || ||||||| ||| | |||||||   ||| ||||||| |||||||||| ||| ||||||||||||||||| ||||||  || |||| | ||  || |    
T  42001739 gaagcacttggatggatgaacctttttgatgatgtctgacaaattcaaggattaaattgatatttcgcataatagagggataaatttggacaacccgtaa 42001640  T
Q  302 aaattcagggacgaatttgatggt 325  Q
    ||||||| ||||||||||||||||    
T  42001639 aaattcaaggacgaatttgatggt 42001616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 15432558 - 15432334
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | ||||| || |||||||||||||||| |||||||||||||||||||||| || ||||  ||| || | ||||     
T  15432558 ttttccaattcaatcaaattagtccttgaacacatgacttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcagcatgactaat 15432459  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
    |||| ||||||||| | | ||||||||    |||||||||| ||||||  |||||| |||||||||||||||||||||||| ||| ||| |||||   |     
T  15432458 agagcacttggacgaatgaacctttttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgagggatgaatttgaccgacccata 15432359  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| |||  |||||||||||    
T  15432358 aaaattcaaggataaatttgatggt 15432334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 41706769 - 41706545
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||  ||| || |||||||    
T  41706769 ttttccaaatcaatcaaattcgtccctgaacacgtgacttccttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatggctaac 41706670  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||    |||||  ||  |||||| ||| ||| |||||||||||||||||||||||||||| ||| |||||  |||    
T  41706669 ggagcccgttaacggagggacctttttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacccgtg 41706570  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||||| || || ||||||||    
T  41706569 aaaattcaggaactaaattgatggt 41706545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 133 - 325
Target Start/End: Complemental strand, 42879557 - 42879362
Alignment:
Q  133 aacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagggaccttttt- 231  Q
    |||||||| ||||||||||| |||| ||||||||||||||| |||||| || |||| |||| || | ||||| ||  ||||||||||||||||||||||     
T  42879557 aacacgtgacttccttcttgtcacgtgtacaagacaacacagcatgcagggcgacatatcagcatgactaacggaacacttggacggagggacctttttg 42879458  T
Q  232 ---gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
       |||||||||| ||||||  |||||||||||| |||||||||||| ||||| ||| ||| |||||  || |||||| | ||||||||||||||||    
T  42879457 atggacgtctgacaaattcatagactaagttgat-tttcgcataattaagggatgaatttgaccgacccgtaaaaatttaaggacgaatttgatggt 42879362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 11021621 - 11021541
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  11021621 aattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatg 11021541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 325
Target Start/End: Complemental strand, 39681 - 39562
Alignment:
Q  210 acttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaat 305  Q
    ||||||||||||||||||||||    |||| ||||  |||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  || |||||    
T  39681 acttggacggagggacctttttaatcgacgcctgataaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtaaaaat 39582  T
Q  306 tcagggacgaatttgatggt 325  Q
    |||||||| || ||||||||    
T  39581 tcagggactaaattgatggt 39562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 41145 - 41225
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||    
T  41145 aattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcagggacgaagttgatg 41225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 28248178 - 28248258
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||    
T  28248178 aattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatg 28248258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 33281 - 33201
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||| ||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||    
T  33281 aattcagggattaaattgatatttcacataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatg 33201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39187 - 39243
Alignment:
Q  1 caaggacatttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  39187 caaggacgttttttatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 39243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 323
Target Start/End: Complemental strand, 361544 - 361453
Alignment:
Q  232 gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||| ||  ||||||||    |||||||||| ||||||| ||||||    
T  361544 gacgtctgacgaattcaatgactaatttgatatttcacataattgagggatgattttggccgattcatgaaaattcaaggacgaagttgatg 361453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 321
Target Start/End: Complemental strand, 16763293 - 16763086
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||| ||||||||||||| ||||  ||| |    |||||||||   |||||    
T  16763293 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaaacaacatgcaagg-gacacgtcatcgccactaacagagattttgga 16763195  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||    ||||||   |||||| ||||||| | ||||||||||| |||| ||||||||| ||| ||||  | | |||||||| |||    
T  16763194 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcaagga 16763095  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  16763094 cgaatttga 16763086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29909451 - 29909502
Alignment:
Q  1 caaggacatttttgatgttttgaaatgtgaagaaggaggtatgggtaatgca 52  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  29909451 caaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgca 29909502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 15373906 - 15373971
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||| || ||||||    
T  15373906 ttgatatttcgcataattgaggaacgaatttggccgacctgtgataattcagggactaagttgatg 15373971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 41708433 - 41708513
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  |||| ||||||| ||| || ||||||    
T  41708433 aattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagagactaagttgatg 41708513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 14389010 - 14389218
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||||||||||||  |||| |||| ||   |||||  |    |||||    
T  14389010 atcaagttagtccttgtacacgtggctgccttattgacacgtgtacaagacaacacaacatgcaagaggacacatcatcactactaacgaaacttttgga 14389109  T
Q  217 cggagggacctttttgacg----tctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| |||||| |    | ||   |||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | ||||||||||  ||    
T  14389110 cggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatga 14389209  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  14389210 cgaatttga 14389218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 16764612 - 16764690
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  16764612 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttga 16764690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 42880829 - 42880894
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||||||| ||||||||| ||| |||||  || |||||||||||||||| ||||||    
T  42880829 ttgatatttcgcataattaagggacgaatttgaccgacccgtaaaaattcagggacgaagttgatg 42880894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 92145 - 92193
Alignment:
Q  9 tttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  92145 ttttttatgttctgaaatgtgaagaaggaggtatgggtaatgcaagggc 92193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 10716809 - 10716873
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaa 181  Q
    |||||||| |||| |  ||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  10716809 atcaaattggtccttgtacacgtggcttccttgttgacacgtgtacaagacaacacaacatgcaa 10716873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 294
Target Start/End: Original strand, 19908172 - 19908353
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  ||||||||||  ||| ||| |||| ||||| ||||||||| ||||||||  ||||  ||| ||   ||||| |||   |||||    
T  19908172 atcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaacacagcatgcaagaggacacgtcatcaccactaacggagcttttgga 19908271  T
Q  217 cggagggacctttttgacg----tctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 294  Q
    |||||||||| ||||||||    ||||   |||||||||||||| | ||||||||||| |||| |||||| || ||||||||    
T  19908272 cggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccga 19908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 25619979 - 25619943
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  25619979 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 25619943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 321
Target Start/End: Complemental strand, 17696424 - 17696216
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||| ||||| |||| ||| |||| ||||| |||||||||||||||||| ||||| |||| ||   ||||| |||   |||||    
T  17696424 atcaatttagtccttgtacacatggctgccttgttgacacgtgtacaggacaacacaacatgcaagatgacacatcatcaccactaacggagcttttgga 17696325  T
Q  217 cggagggaccttt----ttgacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    ||||| |||| ||    ||||||| ||   |||||| ||||||| | |||||||  || |||| ||||| ||| ||||||||  | |||||||||| |||    
T  17696324 cggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatgaatttggccgatttttgaaaattcaagga 17696225  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  17696224 cgaatttga 17696216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 39664674 - 39664882
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  |||||||||| |||| ||| |||| ||||| ||||||||| |  |||||  |||| |||| ||   ||||| |||   |||||    
T  39664674 atcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacagctagcaagaggacacatcatcaccactaacggagcttttgga 39664773  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||    ||||||   |||||| ||||||| | ||||||||| | ||||  |||||||| ||||||||  | | |||||||| |||    
T  39664774 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatttggccgattttttaaaattcaagga 39664873  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  39664874 cgaatttga 39664882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 14387437 - 14387359
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  14387437 aattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 14387359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 42001925 - 42001893
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcag 53  Q
    |||||||||||||||||||||||||||||||||    
T  42001925 tgaaatgtgaagaaggaggtatgggtaatgcag 42001893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 24208098 - 24208149
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 294  Q
    |||||| ||||||| ||||||||||| |||||| ||||||||| ||||||||    
T  24208098 aattcagggactaatttgatatttcgaataattcagggacgaaattggccga 24208149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 325
Target Start/End: Original strand, 11023049 - 11023130
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||| ||||||  |||||||||||   ||||| |||||||| |||||||||   |||||||||||||||||| ||||||||    
T  11023049 aattcagggactattttgatatttcgttaaattgggggacgaatttggccgaccc-tgaaaattcagggacgaaattgatggt 11023130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 6797725 - 6797660
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||    
T  6797725 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaag 6797660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 11315263 - 11315324
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatg 178  Q
    |||||||| |||| |  ||| ||||||||||| ||| |||| ||||||||||||||||||||    
T  11315263 atcaaattggtccttgtacatgtggcttccttgttgacacgtgtacaagacaacacaacatg 11315324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 37418787 - 37418852
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    ||||||||| |||||||| | ||||||| |||||||||  ||||||||||| | ||||| ||||||    
T  37418787 ttgatattttgcataattaaaggacgaatttggccgacccgtgaaaattcaagtacgaagttgatg 37418852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 98 - 325
Target Start/End: Original strand, 46996589 - 46996820
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||     
T  46996589 ctcaacattttccaattcaatcaaattcgtccttgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacagatcagcat 46996688  T
Q  198 ggctaacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
     |||||| ||| ||||||||||||||||||||||    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  46996689 cgctaacggagcacttggacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccg 46996788  T
Q  294 acgtgtgaaaattcagggacgaatttgatggt 325  Q
    ||| ||||||||||||||||||||||||||||    
T  46996789 acgcgtgaaaattcagggacgaatttgatggt 46996820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 102 - 323
Target Start/End: Original strand, 33038688 - 33038913
Alignment:
Q  102 acattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggct 201  Q
    |||||||||||||||||||||| ||||| | ||||| |||||||||||||| |||| ||| |||||||||||||||||| |  |||||||||||| | ||    
T  33038688 acattttccaattcaatcaaatcagtccttgaacacatggcttccttcttgacacgtgtataagacaacacaacatgcaggacgacagatcaacatgcct 33038787  T
Q  202 aacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgt 297  Q
    ||||||| ||||||||||||||||||||||    |||||||||  |||||| |||||||||||||||||||||||||||||||| ||| ||| |||||      
T  33038788 aacagagcacttggacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgaccc 33038887  T
Q  298 gtgaaaattcagggacgaatttgatg 323  Q
     | |||||||| ||||||||||||||    
T  33038888 ataaaaattcaaggacgaatttgatg 33038913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 47341576 - 47341804
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag----gtgacagatcaacaaggc 200  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||| |||||| |    | ||||  ||  || |||    
T  47341576 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcatgcagggcgacatgtccccatggc 47341675  T
Q  201 taacagaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacg 296  Q
    |||| ||| ||||||||||||  ||||||||||    |||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||     
T  47341676 taacggagcacttggacggagatacctttttgattaacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacc 47341775  T
Q  297 tgtgaaaattcagggacgaatttgatggt 325  Q
     ||||||||||| ||||||||||||||||    
T  47341776 cgtgaaaattcaaggacgaatttgatggt 47341804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 117 - 325
Target Start/End: Complemental strand, 23954023 - 23953811
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    |||||||||||||   |||||||||||||||| |||||||| |||||||||||||||||||||| || |||| |||| || ||||||| ||| |||||||    
T  23954023 atcaaattagtcctggaacacgtggcttcctttttgccacgtgtacaagacaacacaacatgcatggcgacatatcagcatggctaacggagcacttgga 23953924  T
Q  217 cggagggaccttt----ttgacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||||||    |||||||||||| |||||| |||||||||||||||||||||||||||| ||||||| ||  |||||  || |||||| | |||    
T  23953923 cggagggacctttttgattgacgtctgacaaattcacggactaagttgatatttcgcataattgatggacgaattttaccgacccgtaaaaatttaagga 23953824  T
Q  313 cgaatttgatggt 325  Q
    |||||||||||||    
T  23953823 cgaatttgatggt 23953811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 40784576 - 40784352
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||| ||| |||||||||||||||||| |  ||||||||| || |  ||||    
T  40784576 ttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaacacaacatgcaggacgacagatcagcatgattaac 40784477  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
    || | | ||||||||||||||||||||    || ||||||| ||||||| ||||||||||||||||||||||||||| ||| ||| || || |||| ||     
T  40784476 agcgcatttggacggagggacctttttgatggatgtctgacaaattcaaagactaagttgatatttcgcataattgaaggatgaatttagctgacgcgta 40784377  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| | ||||||||||||||    
T  40784376 aaaattcaagaacgaatttgatggt 40784352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 46812476 - 46812700
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||| |||||||||||| |||||| | |||||||||||||||||||||||| |||||||||||||||| |||||| || |||| |||| || |||||||    
T  46812476 ttttcaaattcaatcaaagtagtccttgaacacgtggcttccttcttgccacacgtacaagacaacacagcatgcagggcgacatatcagcatggctaac 46812575  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
    |||| |||||||||||  |||||||||    |||||||||| |||| | ||||||| |||||||||| | ||||||||||| ||| |||||||||  ||     
T  46812576 agagcacttggacggaatgacctttttgatggacgtctgacaaatttagggactaaattgatatttcacgtaattgagggatgaatttggccgactcgta 46812675  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| ||||||| ||||||||    
T  46812676 aaaattcaaggacgaagttgatggt 46812700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 8423175 - 8423399
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||  ||| || |||||||    
T  8423175 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatggctaac 8423274  T
Q  205 agaggacttggacggagggaccttt----ttgacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||    |||||||||||  |||||| ||| ||| ||||||||||||||||||||||||| || ||||| |||  |||    
T  8423275 ggagcccgttaacggagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggacaaatttggctgacccgtg 8423374  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    ||||||||||||| || ||||||||    
T  8423375 aaaattcagggactaaattgatggt 8423399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 105 - 340
Target Start/End: Original strand, 35344184 - 35344423
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||  |||  ||| || |||||||    
T  35344184 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggcaacatgtcagcatggctaac 35344283  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||    ||||||| |  |||||| ||| ||| |||||||||||||||||||||||||||| ||||| |||  |||    
T  35344284 ggagcccgttaacggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaatttggctgacccgtg 35344383  T
Q  301 aaaattcagggacgaatttgatggtcgactctttataaaa 340  Q
    ||||||| ||||| || ||||||||  ||||||| |||||    
T  35344384 aaaattcggggactaaattgatggttcactctttttaaaa 35344423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 2167697 - 2167515
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| | ||| |||||||| ||| |||||||| ||||||||||||||| |||||| |||||||  ||| || ||||||  ||| |||||||    
T  2167697 atcaaattagtccttgaacgcgtggctttctttttgccacgtgtacaagacaacacatcatgcagggtgacacgtcagcatggctaatggagcacttgga 2167598  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgac 295  Q
    |||||||||||||||||    |||||||| |||||| |||||||||||||||||||||||||||||||| ||| ||| |||||    
T  2167597 cggagggacctttttgatgggcgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgac 2167515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 185 - 323
Target Start/End: Original strand, 38614886 - 38615027
Alignment:
Q  185 gacagatcaacaaggctaacagaggacttggacggagggaccttttt---gacgtctgacgaattcaaggactaagttgatatttcgcataattgaggga 281  Q
    ||||||||| || ||||||||||| |||| ||||||||||| |||||   |||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  38614886 gacagatcagcatggctaacagagcacttagacggagggacatttttatggacgtctgacaaattcagggactaagttaatatttcgcataattgaggga 38614985  T
Q  282 cgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
     ||| |||  ||||  ||||||||| | ||||||||||||||    
T  38614986 tgaatttgatcgacccgtgaaaatttaaggacgaatttgatg 38615027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 38613506 - 38613599
Alignment:
Q  232 gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||| | ||||||||||||||||    
T  38613506 gacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattgaaggacgaatttgatggt 38613599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 117 - 339
Target Start/End: Complemental strand, 2492544 - 2492319
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| | |||||||| ||||||| |||||||| |||||||||| || | ||||   || || ||||||||| ||||||| ||| ||||| |    
T  2492544 atcaaattagtccttgaacacgtgacttcctttttgccacgtgtacaagacagcagagcatgttgggcgatagatcaacatggctaacggagcacttgaa 2492445  T
Q  217 cggagggaccttttt---gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggac 313  Q
    |||||| || |||||   ||||| |||  |||||||| | |||||||||||||||||||||||| |||  |  ||| |||||  || |||||||  ||||    
T  2492444 cggaggaacttttttatggacgtttgaaaaattcaagtattaagttgatatttcgcataattgaaggataattttgaccgacccgtaaaaattcgaggac 2492345  T
Q  314 gaatttgatggtcgactctttataaa 339  Q
    ||||||||||||  ||||||| ||||    
T  2492344 gaatttgatggtttactctttttaaa 2492319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 323
Target Start/End: Complemental strand, 27955588 - 27955378
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    |||||||| |||| | ||||| |||||||||| |||||| | ||||||||||||||||||||||    |||| |||| || | ||||| ||| |||||||    
T  27955588 atcaaattggtccttgaacacatggcttccttgttgccaagtgtacaagacaacacaacatgcagcacgacacatcagcatgactaacggagcacttgga 27955489  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    ||||||||||| |||    |||||||||| ||||||   | ||||||||||||||| | |||||||||| ||| || || ||   || |||||||| |||    
T  27955488 cggagggacctctttgatggacgtctgacaaattcagaaattaagttgatatttcgtaaaattgagggatgaatttagctgatccgtaaaaattcaagga 27955389  T
Q  313 cgaatttgatg 323  Q
    |||||||||||    
T  27955388 cgaatttgatg 27955378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 4321126 - 4321046
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||    
T  4321126 aattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatg 4321046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 30108653 - 30108573
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||    
T  30108653 aattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatg 30108573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 46994748 - 46994668
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||    
T  46994748 aattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatg 46994668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 3690238 - 3690158
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||||||  ||| |||||||| ||||||| ||||||    
T  3690238 aattcaaggattaaattgatatttcgcataattgaggaacgaagttggccgaactgtaaaaattcaaggacgaagttgatg 3690158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 8421504 - 8421424
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  |||| ||||||||||| || ||||||    
T  8421504 aattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatg 8421424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 45465187 - 45465267
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||||| |||||  || |||||||| ||||||| ||||||    
T  45465187 aattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcaaggacgaagttgatg 45465267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 46810793 - 46810713
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||||||||||||||||||| || ||||||||   ||||||||||||||||||| ||||||    
T  46810793 aattcagggattaaattgatatttcgcataattgagggactaatttggccgatccgtgaaaattcagggacgaagttgatg 46810713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 39859135 - 39859343
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  ||||||||||  ||| ||| |||| ||||| ||||||||| ||||||||  ||||  ||| ||   ||||| |||   |||||    
T  39859135 atcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaacacagcatgcaagaggacacgtcatcaccactaacggagcttttgga 39859234  T
Q  217 cggagggacctttttgacg----tctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||||    ||||   |||||||||||||| | ||||||||||| |||| |||||| || ||||||||  | | |||||||| |||    
T  39859235 cggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgattttttaaaattcaagga 39859334  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  39859335 cgaatttga 39859343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 33775496 - 33775418
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||| ||| |||||||||||||||||||| ||||||||||| |||||  || |||||||||||||||| ||||    
T  33775496 aattcagggattaaattgatatttcgcataattgaaggacgaagttgaccgacccgtaaaaattcagggacgaagttga 33775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 11682880 - 11682828
Alignment:
Q  232 gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacga 284  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  11682880 gacgtctaacgaattcaaggactaatttgatattttgcataattgagggacga 11682828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 47339864 - 47339784
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    ||||||| || ||| |||||||||||||| |||||| ||||||||||||||||  ||  ||||||||||||||| ||||||    
T  47339864 aattcaaagattaaattgatatttcgcatcattgagagacgaagttggccgacccgtagaaattcagggacgaagttgatg 47339784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 27666101 - 27666179
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  27666101 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 27666179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 35403620 - 35403698
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  35403620 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttga 35403698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 35342513 - 35342433
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||||||||||||||||||| || |||||||||  || | ||||||||||| || ||||||    
T  35342513 aattcagggattaaattgatatttcgcataattgagggacaaatttggccgacccgtaataattcagggactaagttgatg 35342433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 47341498 - 47341534
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  47341498 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 47341534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 56418 - 56340
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| || |||||  | | |||||||| ||||||||||||    
T  56418 aattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 56340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 13169684 - 13169762
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| | ||||||||||| |||| |||||| || ||||||||  | |||||||||| ||||||||||||    
T  13169684 aattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttga 13169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 35402057 - 35401979
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| || |||||  | | |||||||| ||||||||||||    
T  35402057 aattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttga 35401979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 321
Target Start/End: Original strand, 37796104 - 37796295
Alignment:
Q  134 acacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagggaccttttt-- 231  Q
    |||||||||| |||||||| |||| ||| ||||||||||||||||||||  |||| |||| ||  |||||| |||    |||||||||||||  ||||      
T  37796104 acacgtggctgccttcttgacacgtgtagaagacaacacaacatgcaagaggacacatcagcatcgctaacggagcttatggacggagggactattttga 37796203  T
Q  232 --gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
      |||||| |   |||||| ||||||| | ||||||||||| ||||   ||||||| ||||| ||  | |||||||||| |||| |||||||    
T  37796204 tggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaaggacaaatttga 37796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 45463758 - 45463676
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||| ||||||  |||||||||||   |||| ||||||||| |||||||||   |||||||||||||||||| ||||||||    
T  45463758 aattcagggactattttgatatttcgttaaatttagggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 45463676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 36762698 - 36762763
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||| |||||||||||||| || ||||||||   || |||||||||||||||| ||||||    
T  36762698 ttgatatttcacataattgagggactaatttggccgatccgtaaaaattcagggacgaagttgatg 36762763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 38614798 - 38614847
Alignment:
Q  246 tcaaggactaagttgatatttcgcataattgagggacgaagttggccgac 295  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||| |||||    
T  38614798 tcaaggactaagttgatattttgcataattgagggatgaatttgaccgac 38614847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 40785566 - 40785631
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||| |||||||||| || ||| |||||||||  ||||||||||| ||||||| ||||||    
T  40785566 ttgatatttcacataattgagagatgaatttggccgacccgtgaaaattcaaggacgaaattgatg 40785631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 40784662 - 40784626
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    ||||||||||||||||||||||| |||||||||||||    
T  40784662 tgaaatgtgaagaaggaggtatgagtaatgcaggggc 40784626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 34691192 - 34691133
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaaca 176  Q
    ||||| ||| |||||  ||||||||||||||| |||||||| ||||||| ||||||||||    
T  34691192 atcaatttaatccctgtacacgtggcttccttgttgccacgtgtacaagccaacacaaca 34691133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 38613681 - 38613618
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgca 180  Q
    ||||| ||||||| | |||||||||||| ||| || ||||| ||||||||||||||| ||||||    
T  38613681 atcaagttagtccttgaacacgtggctttctttttcccacgtgtacaagacaacacaccatgca 38613618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 24226669 - 24226591
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    ||||||||||| || | | ||||||||| |||| | ||||||| ||||||||  | |||||||||| ||||||||||||    
T  24226669 aattcaaggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttga 24226591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 2167790 - 2167753
Alignment:
Q  20 ttgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  2167790 ttgaaatgtgaggaaggaggtatgggtaatacaggggc 2167753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 33037766 - 33037701
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||| ||||||||||||| ||| |||||||||   | |||||||| ||||||| ||||||    
T  33037766 ttgatatttcacataattgagggatgaatttggccgacacataaaaattcaaggacgaacttgatg 33037701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 35693276 - 35693341
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| |||||||||||||| |||||||||    
T  35693276 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacactacatgcaag 35693341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 46439436 - 46439501
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||| ||||||| |  |||||||||| || | ||| |||| ||||||||||||||||||||||||    
T  46439436 atcaatttagtccatgtacacgtggctgccctgttgacacgtgtacaagacaacacaacatgcaag 46439501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 2168837 - 2168917
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||| |||||||||  | ||||| ||||| ||| |||| ||||  || |||||||| ||||||| ||||||    
T  2168837 aattcaaggactaaattgatatttttcttaattaagggatgaatttggacgaccagtaaaaattcaaggacgaagttgatg 2168917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 364
Target Start/End: Complemental strand, 13961795 - 13961763
Alignment:
Q  332 tttataaaacataggtaaaaatgtaaggatatt 364  Q
    ||||||| |||||||||||||||||||||||||    
T  13961795 tttataagacataggtaaaaatgtaaggatatt 13961763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 33038614 - 33038650
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    |||||||||||||||||||||||  ||||||||||||    
T  33038614 tgaaatgtgaagaaggaggtatgtataatgcaggggc 33038650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 46812391 - 46812427
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    |||||||||||||| |||||||| |||||||||||||    
T  46812391 tgaaatgtgaagaatgaggtatgagtaatgcaggggc 46812427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 3e-73; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 98 - 294
Target Start/End: Original strand, 33750271 - 33750471
Alignment:
Q  98 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaa 197  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||     
T  33750271 ctcaacattttccaattcaatcaaattcgtccctgaacacatggcttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcaacat 33750370  T
Q  198 ggctaacagaggacttggacggagggacctttttg----acgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 293  Q
     |||||||||| |||||||||||||||||||||||    | ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33750371 cgctaacagagcacttggacggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccg 33750470  T
Q  294 a 294  Q
    |    
T  33750471 a 33750471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 104 - 322
Target Start/End: Complemental strand, 31821640 - 31821427
Alignment:
Q  104 attttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaa 203  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||         ||||||||||||| ||||||||  ||||||||| |||||||||    
T  31821640 atttttcaattcaatcaaattagtccctgaacacgtggcttccttctt---------acaagacaacacatcatgcaagacgacagatcagcaaggctaa 31821550  T
Q  204 cagaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgt 299  Q
    ||||||||||||||||||||||||||||||    |||||||  |||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31821549 cagaggacttggacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgt 31821450  T
Q  300 gaaaattcagggacgaatttgat 322  Q
    |||||||||||||||||||||||    
T  31821449 gaaaattcagggacgaatttgat 31821427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 42897668 - 42897892
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| | |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||| |||||| |  ||||||||| || |||||||    
T  42897668 ttttccaaataaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcaggacgacagatcagcatggctaac 42897767  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
    |||| ||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||     
T  42897768 agagcacttggacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggccgacccgta 42897867  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| ||||| ||||||||||    
T  42897868 aaaattcaaggacggatttgatggt 42897892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 33160042 - 33160266
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtg-gcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaa 203  Q
    ||||||||||||||||||||||||| | |||||||| |||| |||||||||||| ||| |||||||||||||||||| || ||||||||| || ||||||    
T  33160042 ttttccaattcaatcaaattagtccttgaacacgtgagctt-cttcttgccacgtgtataagacaacacaacatgcagggcgacagatcagcatggctaa 33160140  T
Q  204 cagaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgt 299  Q
    ||||| |||| |  ||||||||||||||||    |||||||| ||||||  ||||||||||||||||| ||||||||||||| ||| ||||||||| |||    
T  33160141 cagagcacttaggtggagggacctttttgatgggcgtctgacaaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctgt 33160240  T
Q  300 gaaaattcagggacgaatttgatggt 325  Q
    ||||||||| ||||||||||||||||    
T  33160241 gaaaattcaaggacgaatttgatggt 33160266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 37525917 - 37526141
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||| ||||||||||||||| || |  |||||||||||| | |||||    
T  37525917 ttttccaattgaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtataagacaacacaacatacaggacgacagatcaacatgactaac 37526016  T
Q  205 agaggacttggacggagggacctttttgacg----tctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
    || | |||||||||||||||||||||||| |    |||||  |||||| |||||||||||||||||||||||||||| | | ||| ||| |||||| |||    
T  37526017 agcgcacttggacggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcgcataattgaagaatgaatttgaccgacgcgtg 37526116  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| ||||||||||||||||    
T  37526117 aaaattcaaggacgaatttgatggt 37526141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 462266 - 462488
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||| ||||||||||||||||||| | |||||   ||||||||||||||||| ||| |||| ||||||||||||| || |||| |||| || |||||||    
T  462266 ttttcaaattcaatcaaattagtccttgaacact--gcttccttcttgccacgtgtataagataacacaacatgcacggcgacaaatcagcatggctaac 462363  T
Q  205 agaggacttggacggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
    |||| ||||||| ||||||| ||||||||    ||| |||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||  |||     
T  462364 agagcacttggatggagggatctttttgatggacgtttgacaaattcaaggactaagttgatatttcgcataattgacggatgaatttggccgatctgta 462463  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    ||||||||  |||||||||||||||    
T  462464 aaaattcaatgacgaatttgatggt 462488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 32822590 - 32822367
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||| || ||||||||| | | ||||||    
T  32822590 ttttcaaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacaaagcatgcatggcgacagatcagc-atgctaac 32822492  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
    | || ||||||||||| ||||||||||    ||| |||||| |||||| |||||||||||||||||   |||||||||||| ||| ||||||||    |     
T  32822491 aaagcacttggacggaaggacctttttgatggacatctgacaaattcagggactaagttgatattttaaataattgagggatgaatttggccgatccata 32822392  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| ||||||| ||||||||    
T  32822391 aaaattcaaggacgaagttgatggt 32822367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 1320847 - 1320623
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||| |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| | |||||| || ||||  ||| || |||| ||    
T  1320847 tttttcaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacatagcatgcagggcgacatgtcaccatggctgac 1320748  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||  ||||||||||| ||||||| ||    |||||||||| |||||| ||||||||||||||||| |||||||||||||| ||| || ||||||  |||    
T  1320747 ggaacacttggacggaaggaccttatttatggacgtctgacaaattcagggactaagttgatattttgcataattgagggatgaatttagccgacccgtg 1320648  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||| | |||| |||||||||||    
T  1320647 aaaatttaaggacaaatttgatggt 1320623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 31201037 - 31201261
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| ||||| || ||||||||||||||||| |||||||||||||| ||||||||| ||||  ||| || |||||||    
T  31201037 ttttccaaatcaatcaaattcgtccctgaacacatgacttccttcttgccacgcatacaagacaacacatcatgcaaggcgacatgtcagcatggctaac 31201136  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||    |||||||||  |||||| ||| ||| |||||||||||||||||||| ||||||| |||||||||  |||    
T  31201137 ggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccgacccgtg 31201236  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    ||||||||||||| || ||||||||    
T  31201237 aaaattcagggactaaattgatggt 31201261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 38882691 - 38882915
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||| ||| || ||||| |||| | |||||||| ||||||| |||||||| ||||||||||||||| |||||| |  |||||||||||| |||||||    
T  38882691 ttttccacttccattaaattggtccttgaacacgtgacttccttgttgccacgagtacaagacaacacagcatgcaggacgacagatcaacatggctaac 38882790  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||| |||||||||||||||| |||||    |||||||||| |||||| ||| ||| ||||||| ||||||| |||| ||| ||| ||| ||||   |||    
T  38882791 ggagcacttggacggagggacattttttatggacgtctgacaaattcagggattaaattgatatctcgcatagttgaaggatgaatttgaccgatccgtg 38882890  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||| ||||||||||||||||    
T  38882891 aaaattcaaggacgaatttgatggt 38882915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 105 - 340
Target Start/End: Complemental strand, 8654729 - 8654491
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||||||   |||||| || ||||  ||| || |||||||    
T  8654729 ttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaacattgcatgcagggcgacatgtcagcatggctaac 8654630  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     ||| ||||||||||||||||| ||||    |||||||||  |||||||| | |||  ||||||||||||||||||||| ||||| ||| |||||  ||     
T  8654629 ggagcacttggacggagggacccttttgatggacgtctgataaattcaagaattaa-atgatatttcgcataattgaggaacgaatttgaccgactcgta 8654531  T
Q  301 aaaattcagggacgaatttgatggtcgactctttataaaa 340  Q
    ||||||||| ||| || ||||||||  ||||||| |||||    
T  8654530 aaaattcagagactaaattgatggttcactctttttaaaa 8654491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 31823494 - 31823559
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  31823494 ttgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatg 31823559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 33748405 - 33748340
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||    
T  33748405 ttgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatg 33748340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 316
Target Start/End: Complemental strand, 24526984 - 24526911
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaa 316  Q
    |||||| ||| ||| |||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||    
T  24526984 aattcagggattaaattgatatttcacataattgagggacgaagttggccgacccgtgtaaattcagggacgaa 24526911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 25373612 - 25373705
Alignment:
Q  230 ttgacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||||| |||||| | | |||||||||||||||||||||||||| | ||| |||||||| | ||||||||||| ||| ||| ||||||    
T  25373612 ttgacgtctgacaaattcaggaattaagttgatatttcgcataattgaggaatgaatttggccgatgcgtgaaaattcaaggatgaacttgatg 25373705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 323
Target Start/End: Complemental strand, 9184584 - 9184391
Alignment:
Q  134 acacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagggacctttttga 233  Q
    |||||||| |||||| ||| |||  ||||||||||||||| |||||| || ||||||||| ||   ||||   || | ||||||||||||||| ||| ||    
T  9184584 acacgtggattccttgttgacacatgtacaagacaacacatcatgcagggcgacagatcagcagcactaatgaagcatttggacggagggaccatttcga 9184485  T
Q  234 ----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
        |||||||| |||||| ||||||| |||||||||||| || ||| | |||||| ||||||||   ||| ||||||| ||||||| ||||||    
T  9184484 tcgacgtctgacaaattcagggactaatttgatatttcgcgtagttgggcgacgaatttggccgattcgtgcaaattcaaggacgaaattgatg 9184391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33750173 - 33750229
Alignment:
Q  1 caaggacatttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  33750173 caaggacgtttttgatgttcagaaatgtgaagaaggaggtatgggtaatgcaggggc 33750229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 40019244 - 40019164
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || ||||||||  |||||| ||||||    
T  40019244 aattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaagacgaagttgatg 40019164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 25707291 - 25707384
Alignment:
Q  230 ttgacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    ||||||||| || |||||| ||| |||||||||||||||||||||||||||| ||| |||||||| | || |||||| | ||| ||| ||||||    
T  25707291 ttgacgtctcacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatgcgtaaaaatttaaggatgaacttgatg 25707384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31821743 - 31821687
Alignment:
Q  1 caaggacatttttgatgttttgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||    
T  31821743 caaggacattttttatgttctgaaatgtgaagaaggatgtatgggtaatgcaagggc 31821687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 8609714 - 8609921
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| | | |||| ||||||||||||||| ||||||||| ||||  ||| ||   ||||| |||   |||||    
T  8609714 atcaatttagtccttgtacacgtggctgccttgtcgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacggagcttttgga 8609812  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||    ||||||   |||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| | |    
T  8609813 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagaa 8609912  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  8609913 cgaatttga 8609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 321
Target Start/End: Original strand, 13108263 - 13108470
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||| ||||  ||| ||   |||||  ||   |||||    
T  13108263 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacgaagcttttgga 13108361  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||    ||||||   |||||| ||||||| ||||||||||||| |||| ||||||| | || |||||  | | |||||||| |||    
T  13108362 cggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttagccgattttttaaaattcaagga 13108461  T
Q  313 cgaatttga 321  Q
    |||||||||    
T  13108462 cgaatttga 13108470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 27691242 - 27691164
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  27691242 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 27691164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 461264 - 461184
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| ||| |||||| ||||||||||||| ||| |||||||||  ||||||||||| ||||||| ||||||    
T  461264 aattcagggattaaattgttatttcacataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttgatg 461184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 321
Target Start/End: Complemental strand, 13282660 - 13282488
Alignment:
Q  152 gccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagggacctttttga----cgtctgacgaattc 247  Q
    |||||| ||||||||||||| | ||||||||| |||| |||| ||   ||||| |||   ||||||||||||||| ||||||    ||| ||   |||||    
T  13282660 gccacgtgtacaagacaacagagcatgcaagg-gacacatcatcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattc 13282562  T
Q  248 aaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    | ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  13282561 agggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 13282488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 31199573 - 31199493
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||| ||| ||| |||||||||| ||||||| ||||||||| |||||||||  |||| ||||||||||| || ||||||    
T  31199573 aattcagggattaaattgatatttctcataattaagggacgaatttggccgacccgtgataattcagggactaagttgatg 31199493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 32824289 - 32824340
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcag 309  Q
    ||||||||||||||||||||||||| || |||||||||  ||||||||||||    
T  32824289 ttgatatttcgcataattgagggactaatttggccgacccgtgaaaattcag 32824340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 34681074 - 34681145
Alignment:
Q  250 ggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    ||||||| | ||||||||||| |||| ||||||||| ||||||||  | |||||||||| ||||||||||||    
T  34681074 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttga 34681145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 321
Target Start/End: Complemental strand, 38547445 - 38547238
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||| ||||  ||| ||   ||||| |||   |||||    
T  38547445 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacggagcttttgga 38547347  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
     ||||||||| ||||    ||||||||   |||||| ||||||| ||||||||||||| |||| | ||||| | ||||||||  | | |||||||| |||    
T  38547346 tggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtatttggccgattttttaaaattcaagga 38547247  T
Q  313 cgaatttga 321  Q
    |||| ||||    
T  38547246 cgaacttga 38547238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 601705 - 601783
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  601705 aattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 285
Target Start/End: Complemental strand, 5036667 - 5036491
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagag----gact 212  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||||||||||||  |||| |||| ||   |||||||||     | |    
T  5036667 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaagaggacacatcatcatcactaacagagctttaatt 5036568  T
Q  213 tggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaa 285  Q
    ||||||||| |||| ||||    ||||||||   |||||||||||||| | |||||||| || |||| |||||||||    
T  5036567 tggacggagagaccattttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacgaa 5036491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 26238814 - 26238736
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    ||||| |||||||| | ||||||||||| |||| ||||||||| ||||| ||  | |||||||||| ||||||||||||    
T  26238814 aattcgaggactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttga 26238736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 27692838 - 27692916
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||| ||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  27692838 aattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 27692916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 325
Target Start/End: Original strand, 28433752 - 28433834
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||| ||||||  |||||||||||   |||||||||||||| ||||||||    |||||||||||||||||| ||||||||    
T  28433752 aattcagggactattttgatatttcgttaaattgagggacgaatttggccgatccttgaaaattcagggacgaaattgatggt 28433834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 29239188 - 29239266
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  29239188 aattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttga 29239266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 33762714 - 33762792
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  33762714 aattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 33762792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 38548832 - 38548910
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||| ||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  38548832 aattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 38548910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 42943427 - 42943505
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  42943427 aattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 42943505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 9673091 - 9673156
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||||||||||| |  |||||||||| |||| ||| |||| ||||| ||||||||||||||||||    
T  9673091 atcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaag 9673156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 13283996 - 13284073
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttg 320  Q
    |||||| ||||||| ||||||||||||| |||| |||||| || ||||||||  | | |||||||| |||||||||||    
T  13283996 aattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttg 13284073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 38881501 - 38881436
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||| ||||||||||||||||||| ||| ||||| ||   ||||||||||| ||||||||||||||    
T  38881501 ttgacatttcgcataattgagggatgaatttggctgattcgtgaaaattcaaggacgaatttgatg 38881436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 42894864 - 42894799
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattca 308  Q
    |||||| ||| ||| |||||||||||||||||| ||||||||| |||| ||||  |||||||||||    
T  42894864 aattcagggattaaattgatatttcgcataattaagggacgaatttggtcgacccgtgaaaattca 42894799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 11722732 - 11722780
Alignment:
Q  134 acacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||||||||||||| ||| |||| |||||| |||||||||||||||||    
T  11722732 acacgtggcttccttgttgacacgtgtacaacacaacacaacatgcaag 11722780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 13106892 - 13106816
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaattt 319  Q
    |||||| ||||||| ||||||||||||| |||| ||||| ||| ||||||||  | | |||||||| ||||||||||    
T  13106892 aattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaattt 13106816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 32822677 - 32822641
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    |||||||||||||||||||||||||||||| ||||||    
T  32822677 tgaaatgtgaagaaggaggtatgggtaatgtaggggc 32822641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 33159959 - 33159995
Alignment:
Q  21 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 57  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33159959 tgaaatgtgaagaaggaggtatgggtgatgcaggggc 33159995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 15308262 - 15308313
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 294  Q
    |||||| ||||||| ||||||||||| |||||| ||||||||| ||||||||    
T  15308262 aattcagggactaatttgatatttcgaataattcagggacgaaattggccga 15308313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 15488631 - 15488682
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 294  Q
    |||||| ||||||| ||||||||||| |||||| ||||||||| ||||||||    
T  15488631 aattcagggactaatttgatatttcgaataattcagggacgaaattggccga 15488682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 1322317 - 1322363
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttg 289  Q
    |||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  1322317 aattcagggattaaattgatattttgcataattgagggacgaagttg 1322363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 29237239 - 29237161
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||| | |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  29237239 aattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 29237161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 33707294 - 33707216
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||| | |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  33707294 aattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 33707216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 33761157 - 33761079
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||||| ||  | | ||||||||  |||||||||||    
T  33761157 aattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttga 33761079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 35509302 - 35509224
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| |||| |||||||    
T  35509302 aattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttga 35509224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 33368847 - 33368767
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    |||||||||| ||| ||||||||||||||||||||| || ||| | | ||||   || ||||||||  |||||||||||||    
T  33368847 aattcaaggattaaattgatatttcgcataattgagagatgaattcgaccgattcgtaaaaattcaaagacgaatttgatg 33368767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 117 - 316
Target Start/End: Original strand, 3018338 - 3018541
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||  || ||||||||| ||||||| ||| |||||||    
T  3018338 atcaaattcgtccctgaacatgtggcttccgtcttgccacgcgtacaagacaacacatcatgcaagacgatagatcaacatggctaacggagcacttgga 3018437  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
     ||||||||||||||||    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3018438 tggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcaggga 3018537  T
Q  313 cgaa 316  Q
    ||||    
T  3018538 cgaa 3018541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 29077558 - 29077334
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  ||| || |||||||    
T  29077558 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacatgtcagcatggctaac 29077459  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||    |||||||||| |||||| |||  || |||| |||||||||||||||||||| || |||||||||| |||    
T  29077458 ggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtg 29077359  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    |||||||||||||||||||||||||    
T  29077358 aaaattcagggacgaatttgatggt 29077334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 101 - 325
Target Start/End: Complemental strand, 2968373 - 2968145
Alignment:
Q  101 aacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggc 200  Q
    |||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||| || |||    
T  2968373 aacattttccaaatcaatcaaattcgtctctgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcacggc 2968274  T
Q  201 taacagaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacg 296  Q
    |||| |||  | |  ||||| ||||||||||    |||||||||  |||||| ||| ||| |||||||||||||||||||||||||||| ||||  |||     
T  2968273 taacggagcccgttaacggatggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgggagacc 2968174  T
Q  297 tgtgaaaattcagggacgaatttgatggt 325  Q
     ||||||||| |||||| || ||||||||    
T  2968173 cgtgaaaattgagggactaaattgatggt 2968145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 4641585 - 4641361
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||  |||  ||| || |||||||    
T  4641585 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggaaacatgtcagcatggctaac 4641486  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||    || ||||||  |||||| ||| ||| |||||||||| ||||||||||||||||| |||||||||  |||    
T  4641485 ggagcccgttaacggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtg 4641386  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    ||||||||||||| || ||||||||    
T  4641385 aaaattcagggactaaattgatggt 4641361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 105 - 325
Target Start/End: Complemental strand, 29112530 - 29112306
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| |||| ||||| ||| ||||  ||| || |||||||    
T  29112530 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacagcatgccaggcgacatgtcagcatggctaac 29112431  T
Q  205 agaggacttggacggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  ||||||||||||||||    |||||||||| |||||| |||  || |||| |||||||||||||||||||| || |||||||||| |||    
T  29112430 ggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtg 29112331  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    ||||||||||||| || ||||||||    
T  29112330 aaaattcagggactaacttgatggt 29112306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 17950649 - 17950567
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||    
T  17950649 aattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggatgaaattgatggt 17950567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 3018528 - 3018581
Alignment:
Q  272 aattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3018528 aattcagggacgaagttggccgacgcgtgaaaattcagggacgaatttgatggt 3018581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 30639684 - 30639619
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    ||||||||| ||||||||||||||| || |||||||||  ||||||||||||||||||| ||||||    
T  30639684 ttgatattttgcataattgagggactaatttggccgacccgtgaaaattcagggacgaagttgatg 30639619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 325
Target Start/End: Original strand, 29114794 - 29114861
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||| ||||||||||||||| |||| || |||||||||| |||||||||||||||| || ||||||||    
T  29114794 ttgaaatttcgcataattgaaggactaatttggccgacgcgtgaaaattcagggactaacttgatggt 29114861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 35174464 - 35174399
Alignment:
Q  258 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 323  Q
    ||||||||||| |||||||||  |||||||||||||||  || |||||||||||||||| ||||||    
T  35174464 ttgatatttcgtataattgagaaacgaagttggccgacccgtaaaaattcagggacgaagttgatg 35174399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 294
Target Start/End: Original strand, 32439015 - 32439178
Alignment:
Q  134 acacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttggacggagggaccttttt-- 231  Q
    |||||||||| |||| ||| |||| ||||||||||||||| ||||||||| ||||  ||| ||   ||||||||    ||||||||||||||| ||||      
T  32439015 acacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaagg-gacacgtcatcactactaacagatcttttggacggagggaccattttga 32439113  T
Q  232 --gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 294  Q
      ||||||||   |||||| ||||||| | ||||||||||| |||| ||||||||| ||| ||||    
T  32439114 tggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga 32439178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 32518498 - 32518576
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||| ||| ||||||||  | | |||||||| ||||||||||||    
T  32518498 aattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttga 32518576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 11355440 - 11355375
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||||||||||| |  |||||||||| |||| ||| |||| ||||| ||||||||||||||||||    
T  11355440 atcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaag 11355375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 323
Target Start/End: Complemental strand, 20523584 - 20523374
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||| ||||||||  ||||||||  |||| |||| ||   ||||||||    |||||    
T  20523584 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaggacaacacggcatgcaagaagacacatcatcaccactaacagaacttttgga 20523485  T
Q  217 cggagggacctttttga----cgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||| ||||||    ||||||   |||||| ||||||| | ||||||||||| |||| | ||||||| ||| ||||  | |||||||||  |||    
T  20523484 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttgaccgatttttgaaaattctagga 20523385  T
Q  313 cgaatttgatg 323  Q
     ||||||||||    
T  20523384 agaatttgatg 20523374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 13613618 - 13613694
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaattt 319  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||||||    
T  13613618 aattcagggactaatttgatatttcgcaaaattcagggacgaatttgaccgatttttcaaaattcaaggacgaattt 13613694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 325
Target Start/End: Original strand, 17952078 - 17952160
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 325  Q
    |||||| ||||||  |||||||||||   ||||  |||||||| |||||||||   |||||||||||||||||| ||||||||    
T  17952078 aattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 17952160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 7049975 - 7049910
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaag 182  Q
    ||||||||||||| |  |||||||| | |||| ||| |||| ||||| ||||||||||||||||||    
T  7049975 atcaaattagtccttgtacacgtggatgccttgttgacacgtgtacatgacaacacaacatgcaag 7049910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 323
Target Start/End: Complemental strand, 10568617 - 10568407
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  ||| |||||| |||| ||| |||| ||||| |||||||||||||||||   |||| |||| ||   ||||| |||   |||||    
T  10568617 atcaaattagtccttgtacatgtggctgccttgttgacacgtgtacatgacaacacaacatgcaaaaggacacatcatcaccactaacggagcttttgga 10568518  T
Q  217 cggagggaccttttt----gacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 312  Q
    |||||||||  ||||    ||||||||   |||||| ||||||| |  |||||||||  |||| | ||||||| ||| | ||  | |||||||||| |||    
T  10568517 cggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacgaatttgactgatttttgaaaattcaagga 10568418  T
Q  313 cgaatttgatg 323  Q
    |||||||||||    
T  10568417 cgaatttgatg 10568407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 6899703 - 6899587
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaacagaggacttgga 216  Q
    ||||||||||||| |  |||||||| | |||| ||| |||| ||||| || |||||||||||||||  |||| |||| |||  ||||| |||   |||||    
T  6899703 atcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgataacacaacatgcaagaggacacatcatcaacactaacggagcttttgga 6899604  T
Q  217 cggagggacctttttga 233  Q
    || ||||||| ||||||    
T  6899603 cgaagggaccattttga 6899587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 14338381 - 14338445
Alignment:
Q  117 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaa 181  Q
    |||||||| |||| |  ||||||||||||||| ||| |||| ||||| ||||||||| |||||||    
T  14338381 atcaaattggtccttgtacacgtggcttccttgttgacacgtgtacaggacaacacatcatgcaa 14338445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 24662659 - 24662615
Alignment:
Q  134 acacgtggcttccttcttgccacgcgtacaagacaacacaacatg 178  Q
    ||||||| ||||||| ||| |||| ||||||||||||||||||||    
T  24662659 acacgtgtcttccttgttgacacgtgtacaagacaacacaacatg 24662615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 6528 - 6752
Alignment:
Q  105 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaaggtgacagatcaacaaggctaac 204  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||| || |||||||    
T  6528 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggtgacatgtcagcatggctaac 6627  T
Q  205 agaggacttggacggagggacctttttgacg----tctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 300  Q
     |||  | |  |||||||||||||||||| |    |||||  |||||| ||| ||| |||||||||| ||||||||||||||||| |||||||||  |||    
T  6628 ggagcccgttaacggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtg 6727  T
Q  301 aaaattcagggacgaatttgatggt 325  Q
    ||||||||||||| || ||||||||    
T  6728 aaaattcagggactaaattgatggt 6752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 308
Target Start/End: Complemental strand, 2199 - 2121
Alignment:
Q  230 ttgacgtctgacgaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattca 308  Q
    |||||||||||| |||| | ||| |||||||||||||||||||||||||||| ||| |||| ||| | || ||||||||    
T  2199 ttgacgtctgacaaatttagggattaagttgatatttcgcataattgagggatgaatttggtcgatgcgtaaaaattca 2121  T

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Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 3382 - 3304
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| |||||| || ||||||||  | | |||||||| ||||||||||||    
T  3382 aattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttga 3304  T

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Target: scaffold0058; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 4554 - 4476
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| |||||| || ||||||||  | | |||||||| ||||||||||||    
T  4554 aattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttga 4476  T

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Target: scaffold0058; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 14344 - 14422
Alignment:
Q  243 aattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 321  Q
    |||||| ||||||| ||||||||||||| |||| ||||||||| || |||||  | | |||||||| ||||||||||||    
T  14344 aattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 14422  T

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