View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17903_low_50 (Length: 319)
Name: NF17903_low_50
Description: NF17903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17903_low_50 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 7 - 248
Target Start/End: Complemental strand, 12033432 - 12033191
Alignment:
| Q |
7 |
tcgaagaaaatttgaggtgtaacaaaatttgagatgtagcaaaccaaataaaattaattctctctcaagacctcgtcggtcaatctatcaaaccgtgtag |
106 |
Q |
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| T |
12033432 |
tcgaataaaatttgaggtgtaacaaaatttgagatgtagcaaaccaaatacaattaattctctctcaagacctcgttggtcaatctatcaaaccgtgtag |
12033333 |
T |
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| Q |
107 |
catgcattctctagatcatgatttatcaaagcactagtcactacataaaggtggtcatccacattaaaatttcacgtctaatcaaattgttcaaaataac |
206 |
Q |
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| T |
12033332 |
catgcattctctagatcatgatttatcaaagcactagtcactacataaaggtggtcatccacattaaaatttcacgtctaatcaaattgttcaaaataac |
12033233 |
T |
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| Q |
207 |
ctaaggtaccatcttgttccaaattacattatattgcacagg |
248 |
Q |
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| T |
12033232 |
ctaaggtaccatcttgttccaaattacattatattacacagg |
12033191 |
T |
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