View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17903_low_56 (Length: 307)

Name: NF17903_low_56
Description: NF17903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17903_low_56
NF17903_low_56
[»] chr8 (43 HSPs)
chr8 (13-248)||(4061687-4061922)
chr8 (135-272)||(16008394-16008534)
chr8 (135-224)||(15218289-15218378)
chr8 (135-224)||(35323871-35323960)
chr8 (150-209)||(29520506-29520565)
chr8 (135-224)||(35249777-35249870)
chr8 (159-224)||(3801857-3801922)
chr8 (223-278)||(14742075-14742130)
chr8 (226-273)||(39953262-39953309)
chr8 (224-278)||(1064955-1065009)
chr8 (223-277)||(14742832-14742886)
chr8 (223-269)||(16917416-16917462)
chr8 (223-272)||(1928586-1928635)
chr8 (223-272)||(11523722-11523771)
chr8 (223-272)||(25473402-25473451)
chr8 (223-272)||(36545383-36545432)
chr8 (223-271)||(2216520-2216568)
chr8 (147-222)||(30453859-30453935)
chr8 (223-271)||(35914601-35914649)
chr8 (223-271)||(44529459-44529507)
chr8 (223-271)||(45419469-45419517)
chr8 (223-278)||(490569-490624)
chr8 (223-262)||(18741866-18741905)
chr8 (223-262)||(18746830-18746869)
chr8 (226-272)||(30812815-30812861)
chr8 (226-272)||(31309590-31309636)
chr8 (227-277)||(32569704-32569754)
chr8 (223-277)||(44047526-44047580)
chr8 (223-272)||(15215411-15215460)
chr8 (223-260)||(23492268-23492305)
chr8 (223-272)||(35324007-35324056)
chr8 (223-272)||(36565240-36565289)
chr8 (223-272)||(41031419-41031468)
chr8 (223-272)||(41031525-41031574)
chr8 (223-272)||(42854003-42854052)
chr8 (227-277)||(5205413-5205460)
chr8 (223-255)||(12491154-12491186)
chr8 (226-262)||(18473981-18474017)
chr8 (223-271)||(26363720-26363768)
chr8 (226-262)||(33666586-33666622)
chr8 (223-255)||(35085153-35085185)
chr8 (223-255)||(36394964-36394996)
chr8 (228-260)||(42584597-42584629)
[»] chr2 (46 HSPs)
chr2 (135-272)||(37520591-37520729)
chr2 (135-224)||(1648008-1648097)
chr2 (135-224)||(16290743-16290832)
chr2 (135-213)||(8561087-8561165)
chr2 (142-224)||(11992914-11992996)
chr2 (135-224)||(45329647-45329736)
chr2 (171-224)||(23766909-23766962)
chr2 (171-224)||(23796102-23796155)
chr2 (223-278)||(227423-227478)
chr2 (223-278)||(17670702-17670757)
chr2 (223-278)||(38328363-38328418)
chr2 (223-278)||(38430118-38430172)
chr2 (223-277)||(3635317-3635371)
chr2 (223-272)||(4807829-4807878)
chr2 (223-272)||(9531599-9531648)
chr2 (223-272)||(12520061-12520110)
chr2 (230-275)||(20935445-20935490)
chr2 (223-272)||(25834912-25834961)
chr2 (223-272)||(28508912-28508961)
chr2 (223-272)||(30306266-30306315)
chr2 (223-272)||(43573129-43573178)
chr2 (225-277)||(8560800-8560852)
chr2 (223-271)||(12474927-12474975)
chr2 (223-271)||(38452686-38452734)
chr2 (223-271)||(41763043-41763091)
chr2 (223-278)||(451641-451696)
chr2 (223-270)||(18959145-18959192)
chr2 (223-278)||(25384703-25384758)
chr2 (223-277)||(3866306-3866360)
chr2 (226-272)||(12470896-12470942)
chr2 (226-272)||(12489801-12489847)
chr2 (223-277)||(12734934-12734988)
chr2 (162-220)||(28218514-28218572)
chr2 (226-272)||(35643185-35643231)
chr2 (226-272)||(44437720-44437766)
chr2 (223-272)||(2610822-2610871)
chr2 (223-272)||(7326159-7326208)
chr2 (226-271)||(17429287-17429332)
chr2 (223-271)||(937209-937257)
chr2 (223-255)||(8181014-8181046)
chr2 (224-272)||(15775844-15775892)
chr2 (223-255)||(16521023-16521055)
chr2 (223-275)||(19863468-19863520)
chr2 (223-275)||(19867800-19867852)
chr2 (223-275)||(19872701-19872753)
chr2 (223-271)||(36183685-36183733)
[»] chr3 (37 HSPs)
chr3 (133-224)||(51450772-51450863)
chr3 (135-224)||(52136315-52136404)
chr3 (135-224)||(31566267-31566356)
chr3 (135-224)||(7023147-7023236)
chr3 (134-224)||(9256258-9256348)
chr3 (223-278)||(5169066-5169121)
chr3 (223-278)||(48508469-48508524)
chr3 (223-278)||(54128613-54128668)
chr3 (223-277)||(12096699-12096753)
chr3 (222-272)||(39512776-39512826)
chr3 (226-271)||(14415260-14415305)
chr3 (223-272)||(52139034-52139083)
chr3 (223-272)||(53519814-53519863)
chr3 (226-278)||(311302-311354)
chr3 (223-271)||(31566161-31566209)
chr3 (223-271)||(38060948-38060996)
chr3 (223-262)||(41529995-41530034)
chr3 (223-262)||(52927857-52927896)
chr3 (223-277)||(7895874-7895928)
chr3 (223-261)||(24778619-24778657)
chr3 (226-272)||(35032765-35032811)
chr3 (223-261)||(40991665-40991703)
chr3 (223-277)||(45374471-45374525)
chr3 (223-277)||(47555326-47555380)
chr3 (227-277)||(53262379-53262429)
chr3 (151-220)||(11316281-11316350)
chr3 (223-260)||(21862752-21862789)
chr3 (228-273)||(37083290-37083335)
chr3 (223-272)||(45834599-45834648)
chr3 (227-272)||(48532196-48532241)
chr3 (223-272)||(49503567-49503616)
chr3 (223-272)||(52156083-52156132)
chr3 (223-271)||(15296141-15296189)
chr3 (230-274)||(31454222-31454266)
chr3 (223-259)||(32350151-32350187)
chr3 (223-275)||(45486845-45486897)
chr3 (223-271)||(49042171-49042219)
[»] chr1 (68 HSPs)
chr1 (135-224)||(32079305-32079394)
chr1 (135-224)||(49350479-49350568)
chr1 (135-224)||(52920979-52921068)
chr1 (139-224)||(4001850-4001935)
chr1 (137-224)||(49527443-49527530)
chr1 (135-224)||(51850761-51850850)
chr1 (142-224)||(9599915-9599997)
chr1 (159-224)||(8670813-8670878)
chr1 (145-213)||(52815018-52815086)
chr1 (137-224)||(1290198-1290285)
chr1 (135-224)||(15424517-15424604)
chr1 (165-224)||(52463095-52463154)
chr1 (147-224)||(6985621-6985696)
chr1 (161-224)||(6039612-6039675)
chr1 (223-277)||(4029356-4029410)
chr1 (135-201)||(16538782-16538848)
chr1 (223-272)||(28090693-28090742)
chr1 (222-262)||(8203143-8203183)
chr1 (223-271)||(21769711-21769759)
chr1 (223-271)||(28533701-28533749)
chr1 (223-262)||(26299302-26299341)
chr1 (223-278)||(43481791-43481846)
chr1 (223-277)||(25979225-25979279)
chr1 (223-277)||(30202124-30202178)
chr1 (223-272)||(1210979-1211028)
chr1 (223-272)||(1704861-1704910)
chr1 (223-272)||(8796443-8796492)
chr1 (223-272)||(29577486-29577535)
chr1 (223-272)||(41560463-41560512)
chr1 (223-272)||(44941775-44941824)
chr1 (223-276)||(52561584-52561637)
chr1 (227-279)||(34444594-34444646)
chr1 (224-272)||(38758019-38758067)
chr1 (224-272)||(38807670-38807718)
chr1 (223-271)||(49347393-49347441)
chr1 (223-271)||(52921314-52921362)
chr1 (223-278)||(2914116-2914171)
chr1 (223-278)||(4318838-4318893)
chr1 (223-262)||(22175379-22175418)
chr1 (223-262)||(37462885-37462924)
chr1 (223-278)||(51602290-51602345)
chr1 (226-272)||(4707220-4707266)
chr1 (222-260)||(19908046-19908084)
chr1 (222-272)||(27847799-27847849)
chr1 (223-277)||(41165516-41165570)
chr1 (226-272)||(51440764-51440810)
chr1 (227-272)||(696508-696553)
chr1 (222-271)||(4380193-4380241)
chr1 (223-272)||(9592968-9593017)
chr1 (223-272)||(15086156-15086205)
chr1 (223-272)||(22090330-22090379)
chr1 (225-262)||(29129020-29129057)
chr1 (223-272)||(34792348-34792397)
chr1 (223-272)||(37311754-37311803)
chr1 (223-272)||(42539211-42539260)
chr1 (223-272)||(44751718-44751767)
chr1 (223-255)||(4590548-4590580)
chr1 (227-279)||(5690428-5690480)
chr1 (223-271)||(12231592-12231640)
chr1 (223-271)||(25715326-25715374)
chr1 (223-255)||(32404542-32404574)
chr1 (223-279)||(37430412-37430468)
chr1 (223-271)||(40568410-40568458)
chr1 (223-271)||(42337790-42337838)
chr1 (223-255)||(46423232-46423264)
chr1 (222-262)||(50830643-50830683)
chr1 (135-175)||(51444589-51444629)
chr1 (232-272)||(52901039-52901079)
[»] chr6 (17 HSPs)
chr6 (135-224)||(20430575-20430664)
chr6 (145-224)||(6079585-6079664)
chr6 (223-272)||(3206458-3206507)
chr6 (223-278)||(28085610-28085665)
chr6 (223-272)||(34504-34553)
chr6 (223-272)||(12890809-12890858)
chr6 (162-223)||(26489368-26489429)
chr6 (223-279)||(5258140-5258196)
chr6 (180-224)||(6056338-6056382)
chr6 (223-271)||(9707004-9707052)
chr6 (223-271)||(33730199-33730247)
chr6 (223-271)||(34934830-34934878)
chr6 (223-262)||(608395-608434)
chr6 (143-213)||(2544947-2545017)
chr6 (223-272)||(12133901-12133950)
chr6 (223-271)||(1615223-1615271)
chr6 (223-259)||(6906839-6906875)
[»] chr5 (42 HSPs)
chr5 (135-224)||(2078546-2078635)
chr5 (135-219)||(10293688-10293772)
chr5 (147-224)||(39668787-39668864)
chr5 (143-224)||(32489109-32489190)
chr5 (153-224)||(11069371-11069442)
chr5 (138-209)||(25160-25231)
chr5 (223-278)||(2915489-2915544)
chr5 (223-274)||(18855841-18855892)
chr5 (165-224)||(22703833-22703892)
chr5 (171-224)||(3292666-3292719)
chr5 (223-278)||(4496618-4496673)
chr5 (223-274)||(7678711-7678762)
chr5 (223-272)||(408493-408542)
chr5 (223-272)||(1287578-1287627)
chr5 (226-279)||(28976851-28976904)
chr5 (223-272)||(29816616-29816665)
chr5 (223-272)||(36551380-36551429)
chr5 (223-271)||(3302078-3302126)
chr5 (223-271)||(16347380-16347428)
chr5 (223-262)||(218061-218100)
chr5 (226-277)||(4653489-4653540)
chr5 (223-262)||(5558375-5558414)
chr5 (226-277)||(12492378-12492429)
chr5 (223-262)||(14668005-14668044)
chr5 (223-262)||(30213809-30213848)
chr5 (223-278)||(32442119-32442173)
chr5 (223-262)||(38685201-38685240)
chr5 (223-278)||(41894307-41894362)
chr5 (223-277)||(10639536-10639590)
chr5 (227-277)||(14665950-14666000)
chr5 (227-277)||(15588384-15588434)
chr5 (226-272)||(28411913-28411959)
chr5 (223-272)||(7359260-7359309)
chr5 (223-272)||(11675764-11675813)
chr5 (223-260)||(13561397-13561434)
chr5 (223-260)||(20457007-20457044)
chr5 (223-272)||(38132570-38132619)
chr5 (223-260)||(39040990-39041027)
chr5 (223-272)||(42576244-42576293)
chr5 (223-255)||(1275498-1275530)
chr5 (227-271)||(3000977-3001021)
chr5 (223-255)||(27386574-27386606)
[»] scaffold0279 (1 HSPs)
scaffold0279 (135-224)||(18383-18472)
[»] scaffold0024 (1 HSPs)
scaffold0024 (139-224)||(48265-48350)
[»] scaffold0245 (1 HSPs)
scaffold0245 (137-224)||(16603-16690)
[»] scaffold0001 (1 HSPs)
scaffold0001 (167-224)||(440116-440173)
[»] chr4 (50 HSPs)
chr4 (147-219)||(54529556-54529628)
chr4 (223-277)||(35690505-35690559)
chr4 (135-213)||(16000230-16000304)
chr4 (223-278)||(50238608-50238663)
chr4 (223-278)||(50238694-50238749)
chr4 (223-274)||(56375524-56375575)
chr4 (223-277)||(21528522-21528576)
chr4 (135-224)||(27453172-27453259)
chr4 (223-277)||(30634100-30634154)
chr4 (223-277)||(44719355-44719409)
chr4 (223-277)||(55007980-55008034)
chr4 (223-272)||(436463-436512)
chr4 (227-272)||(28236420-28236465)
chr4 (223-272)||(39100535-39100584)
chr4 (223-272)||(45209204-45209253)
chr4 (223-272)||(46153942-46153991)
chr4 (223-272)||(47265194-47265243)
chr4 (225-262)||(49686929-49686966)
chr4 (223-272)||(52569514-52569563)
chr4 (223-272)||(56130404-56130453)
chr4 (223-271)||(31959814-31959862)
chr4 (223-271)||(46236723-46236771)
chr4 (223-271)||(48622543-48622591)
chr4 (226-277)||(1211386-1211437)
chr4 (223-278)||(6957832-6957887)
chr4 (223-262)||(7544540-7544579)
chr4 (223-262)||(7947171-7947210)
chr4 (223-262)||(27450189-27450228)
chr4 (223-262)||(39708667-39708706)
chr4 (223-262)||(50862865-50862904)
chr4 (223-277)||(1777011-1777065)
chr4 (223-277)||(8286673-8286727)
chr4 (223-273)||(15665335-15665385)
chr4 (223-277)||(19061929-19061983)
chr4 (135-224)||(883536-883625)
chr4 (223-272)||(12494897-12494946)
chr4 (223-272)||(19969415-19969464)
chr4 (225-262)||(20047670-20047707)
chr4 (223-272)||(25427861-25427910)
chr4 (167-224)||(38475072-38475129)
chr4 (223-272)||(48174092-48174141)
chr4 (223-272)||(49939733-49939782)
chr4 (223-255)||(4441087-4441119)
chr4 (223-255)||(15661888-15661920)
chr4 (223-271)||(23906297-23906345)
chr4 (222-262)||(26024859-26024899)
chr4 (223-255)||(26037521-26037553)
chr4 (226-278)||(31961259-31961311)
chr4 (151-191)||(42309152-42309192)
chr4 (223-271)||(49738550-49738598)
[»] chr7 (44 HSPs)
chr7 (223-279)||(31869094-31869150)
chr7 (176-220)||(36232115-36232159)
chr7 (223-277)||(4604781-4604835)
chr7 (223-277)||(12841269-12841323)
chr7 (223-277)||(28208322-28208376)
chr7 (223-277)||(29650618-29650672)
chr7 (223-277)||(31005439-31005493)
chr7 (223-277)||(31682596-31682650)
chr7 (223-277)||(43491542-43491596)
chr7 (223-272)||(2885721-2885770)
chr7 (223-272)||(11594194-11594243)
chr7 (223-272)||(27649014-27649063)
chr7 (163-220)||(30089118-30089175)
chr7 (223-272)||(37618179-37618228)
chr7 (223-272)||(39906371-39906420)
chr7 (223-272)||(41483721-41483770)
chr7 (224-277)||(44855168-44855221)
chr7 (223-272)||(48515509-48515558)
chr7 (223-271)||(40979928-40979976)
chr7 (166-224)||(46833173-46833228)
chr7 (223-262)||(6263493-6263532)
chr7 (223-262)||(6375102-6375141)
chr7 (223-262)||(28708615-28708654)
chr7 (227-278)||(32631802-32631853)
chr7 (223-262)||(35906210-35906249)
chr7 (223-262)||(46355865-46355904)
chr7 (226-272)||(14593989-14594035)
chr7 (226-272)||(16013512-16013558)
chr7 (226-272)||(21244282-21244328)
chr7 (223-277)||(36869231-36869285)
chr7 (223-261)||(40138958-40138996)
chr7 (223-277)||(40630668-40630722)
chr7 (223-277)||(42969932-42969986)
chr7 (223-273)||(47652781-47652831)
chr7 (227-272)||(1011284-1011329)
chr7 (226-267)||(6682590-6682631)
chr7 (223-260)||(7273334-7273371)
chr7 (223-272)||(25891122-25891171)
chr7 (223-272)||(42187675-42187724)
chr7 (223-272)||(43281908-43281957)
chr7 (223-272)||(45836481-45836530)
chr7 (226-278)||(27893556-27893608)
chr7 (226-262)||(34745984-34746020)
chr7 (223-255)||(36652226-36652258)
[»] scaffold0168 (1 HSPs)
scaffold0168 (223-278)||(28882-28937)
[»] scaffold0018 (1 HSPs)
scaffold0018 (223-272)||(31702-31751)
[»] scaffold0491 (1 HSPs)
scaffold0491 (223-262)||(3671-3710)
[»] scaffold0050 (1 HSPs)
scaffold0050 (165-207)||(70415-70457)
[»] scaffold1318 (1 HSPs)
scaffold1318 (223-260)||(565-602)
[»] scaffold0157 (1 HSPs)
scaffold0157 (223-272)||(25531-25580)


Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 4061687 - 4061922
Alignment:
Q  13 agcatagggcaaaatggatgagaagaaaacatagccacaaaacttaaatgaatcgatgcaaattaatgtattactactgcattctgtacatgtattaaat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4061687 agcatagggcaaaatggatgagaagaaaacatagccacaaaacttaaatgaatcgatgcaaattaatgtattactactgcattctgtacatgtattaaat 4061786  T
Q  113 ctacacaaagtcggttagatacaatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttg 212  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4061787 ctacacaaagtcgcatagatacaatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacgtaaaactttg 4061886  T
Q  213 tcaaatctctatccatgtagccgaccccacttagtg 248  Q
    ||||||||||||||||||||||||||||||||||||    
T  4061887 tcaaatctctatccatgtagccgaccccacttagtg 4061922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 272
Target Start/End: Complemental strand, 16008534 - 16008394
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat-ccat--gta 231  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||  |||   ||    
T  16008534 aatcctgccaaggccggtcccaagcctgggtaaaaggagagggttgtgttaggcctcgacagccaacgtaaaactttgttgaatctctatgacatagata 16008435  T
Q  232 gccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    | ||||||||||||||| |||||||||||||  ||||||||    
T  16008434 ggcgaccccacttagtgggataagacttggttgttgttgtt 16008394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 15218378 - 15218289
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||||| || |||| ||||| |||||| |||||||||    
T  15218378 aatcctgccaaggtcggtcctaagttcgggtaaaaggagagggttgtgttaagcctcgatagtcaacgtaaaattttgtcgaatctctat 15218289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 35323871 - 35323960
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||| |||||| | ||||||| ||| |||||||| ||| ||||| || ||||||||||||||||||||||| |||||| |||||||||    
T  35323871 aatcctaccaaggtcagtcccaagcccaggtaaaagaagacggttgggtcaggcctcgacagccaacttaaaattttgtcgaatctctat 35323960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 29520506 - 29520565
Alignment:
Q  150 ggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaact 209  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  29520506 ggtcccaagcccgggtaaaaggagagggttgtgttaggcctctacaaccaacgtaaaact 29520565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 35249777 - 35249870
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacag----ccaacttaaaactttgtcaaatctctat 224  Q
    ||||||| |||| | |||||||| |||| ||||||| ||||||||||| |||||||||||||    ||||| |||||||||||| |||||||||    
T  35249777 aatcctgtcaagactggtcccaagcccgcgtaaaagaagagggttgtgataggcctcgacagacaaccaacataaaactttgtcgaatctctat 35249870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 3801857 - 3801922
Alignment:
Q  159 cccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||| ||||||||||| ||||||||| ||||||| ||||| |||||||||||  |||||||||    
T  3801857 cccgggtgaaaggagagggctgtgttaggtctcgacaaccaacgtaaaactttgttgaatctctat 3801922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 14742130 - 14742075
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  14742130 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 14742075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 39953309 - 39953262
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtta 273  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||    
T  39953309 catgtagccgaccccacttagtgggataagacttggttgttgttgtta 39953262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 1064955 - 1065009
Alignment:
Q  224 tccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    ||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  1064955 tccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 1065009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 14742886 - 14742832
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| |||||| ||||    
T  14742886 atccatgtagccaaccccacttagtgggataaggcttggtgatggttgttgttgt 14742832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 16917416 - 16917462
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgtt 269  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  16917416 atccatgtagccgtccccacttagtgggataagacttggttattgtt 16917462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 1928635 - 1928586
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  1928635 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 1928586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 11523771 - 11523722
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  11523771 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 11523722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 25473451 - 25473402
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  25473451 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 25473402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 36545383 - 36545432
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  36545383 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 36545432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 2216520 - 2216568
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    ||||||||||||||||||||| |||| |||||| ||||||| |||||||    
T  2216520 atccatgtagccgaccccactcagtgagataaggcttggtggttgttgt 2216568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 30453935 - 30453859
Alignment:
Q  147 gccggtcccaaacccgggtaaaaggagagggttgtgttaggc-ctcgacagccaacttaaaactttgtcaaatctct 222  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||  | |||| ||||| |||||||| ||| |||||||    
T  30453935 gccggtcccaagcccggataaaaagagagggttgtgttaggcagttgacaaccaacgtaaaacttagtcgaatctct 30453859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 35914649 - 35914601
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    ||||||||||| |||||||||||||| |||||||||||||  |||||||    
T  35914649 atccatgtagctgaccccacttagtgagataagacttggttgttgttgt 35914601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 44529459 - 44529507
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  44529459 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 44529507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 45419469 - 45419517
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  45419469 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 45419517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 490569 - 490624
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| |||| |  |||||||| |||||    
T  490569 atccatgtagccgaccccacttagtgggataaggcttgtttgttgttgttgttgta 490624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 18741866 - 18741905
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  18741866 atccaagtagccgaccccacttagtgggataagacttggt 18741905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 18746830 - 18746869
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  18746830 atccaagtagccgaccccacttagtgggataagacttggt 18746869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 30812861 - 30812815
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| || ||| ||||||| ||||||||    
T  30812861 catgtagccgaccccacttagtgggaaaaggcttggtggttgttgtt 30812815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 31309590 - 31309636
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||| |||||||||| |||||||||||||  ||||||||    
T  31309590 catgtagccgacaccacttagtgggataagacttggttgttgttgtt 31309636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 32569754 - 32569704
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||||||| |||||| |||||||||||||  |||||||| ||||    
T  32569754 atgtagccgaccccatttagtgggataagacttggttgttgttgttgttgt 32569704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 44047580 - 44047526
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||| |||||||||||||| |||||| ||||||  |||||||| ||||    
T  44047580 atccatgtagctgaccccacttagtgggataaggcttggttgttgttgttgttgt 44047526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 15215460 - 15215411
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||  |||||| ||||||  ||||||||    
T  15215460 atccatgtagccgaccccacttagtaggataaggcttggttgttgttgtt 15215411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 23492268 - 23492305
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttg 260  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  23492268 atccatgtagccgaccccacttagtgagataaggcttg 23492305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 35324007 - 35324056
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||| |||||||||||||||||||| |||||| ||||||  ||||||||    
T  35324007 atccacgtagccgaccccacttagtgggataaggcttggttgttgttgtt 35324056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 36565289 - 36565240
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| || |||  ||||||||    
T  36565289 atccatgtagccgaccccacttagtgggataaggctcggttgttgttgtt 36565240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 41031468 - 41031419
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||| ||||||||||||||||||| |||||| ||||||  ||||||||    
T  41031468 atccatatagccgaccccacttagtgggataaggcttggttgttgttgtt 41031419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 41031574 - 41031525
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||| ||||||||||||||||||| |||||| ||||||  ||||||||    
T  41031574 atccatatagccgaccccacttagtgggataaggcttggttgttgttgtt 41031525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 42854052 - 42854003
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||| |||||| ||||||  |||||| ||||||||    
T  42854052 atccatgtagccgaccccatttagtgggataaggtttggtggttgttgtt 42854003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 5205413 - 5205460
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||| ||||||||||||||| ||||||||||||   |||||||||||||    
T  5205413 atgtaggcgaccccacttagtgggataagacttgg---ttgttgttattgt 5205460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 12491186 - 12491154
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  12491186 atccatgtagccgaccccacttagtgggataag 12491154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 18474017 - 18473981
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||| |||||||||| |||||||||||||    
T  18474017 catgtagccgacaccacttagtgggataagacttggt 18473981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 26363720 - 26363768
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||| |||||||||| |||| |||||||||||||  |||||||    
T  26363720 atccatgtagtcgaccccactcagtgggataagacttggttgttgttgt 26363768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 33666622 - 33666586
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggt 262  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  33666622 catgtagtcgaccctacttagtgtgataagacttggt 33666586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 35085185 - 35085153
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  35085185 atccatgtagccgaccccacttagtgggataag 35085153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 36394996 - 36394964
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  36394996 atccatgtagccgaccccacttagtgggataag 36394964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 260
Target Start/End: Original strand, 42584597 - 42584629
Alignment:
Q  228 tgtagccgaccccacttagtgtgataagacttg 260  Q
    ||||||||||||||||||||| |||||||||||    
T  42584597 tgtagccgaccccacttagtgggataagacttg 42584629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 37520591 - 37520729
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat-ccatgtagc 233  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||  ||    
T  37520591 aatcctgccaaggccggtcccaagcccgggtaaaaggagagggttgtgttaggcctcgacagccaacgtaaaactttgtcgaatctctatgacatggcgc 37520690  T
Q  234 cgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||| |||||| ||||||  ||||||||    
T  37520691 cgaccccacttagtgggataaggcttggttgttgttgtt 37520729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 1648008 - 1648097
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  1648008 aatcctgccaaggccggtcccaagcccgggtaaaaggagagggttgtgttaggcctcgacagccaacgtaaaactttgtcgaatctctat 1648097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 16290743 - 16290832
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  16290743 aatcctgccaaggccggtcccaagcccgggtaaaaggaaagggttgtgttaggcctcgatagccaacgtaaaactttgtcgaatctctat 16290832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 8561165 - 8561087
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgt 213  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8561165 aatcctgccaaggccggtcccaagcctgggtaaaaggagagggttgtgttaggcctcgacagccaacgtaaaactttgt 8561087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 11992914 - 11992996
Alignment:
Q  142 ccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  11992914 ccaaggccggtcccaagcccgggtaaaagaagagggttgtgttaggcctcgacagccaacataaaactttgtcgaatctctat 11992996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 45329736 - 45329647
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||| ||| |||||||| ||||| || | |||||||||||||||||||||||| ||||||||||||| ||||||||| || |||||||||    
T  45329736 aatcatgctaaggccggccccaagcctgagtaaaaggagagggttgtgttaggtctcgacagccaacgtaaaactttatcgaatctctat 45329647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 23766962 - 23766909
Alignment:
Q  171 gagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  23766962 gagagggttgtgttaggcctcgacagccaacgtaaaactttgtcgaatctctat 23766909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 23796155 - 23796102
Alignment:
Q  171 gagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  23796155 gagagggttgtgttaggcctcgacagccaacgtaaaactttgtcgaatctctat 23796102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 227423 - 227478
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  227423 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 227478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 17670702 - 17670757
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  17670702 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 17670757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 38328418 - 38328363
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  38328418 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 38328363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 38430118 - 38430172
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||| |||||    
T  38430118 atccatgtagccgaccccacttagtgagataaggcttggtg-ttgttgttgttgta 38430172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 3635371 - 3635317
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  3635371 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 3635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 4807829 - 4807878
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  4807829 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 4807878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 9531648 - 9531599
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  9531648 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 9531599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 12520110 - 12520061
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  12520110 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 12520061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 20935445 - 20935490
Alignment:
Q  230 tagccgaccccacttagtgtgataagacttggtgattgttgttatt 275  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||    
T  20935445 tagccgaccccacttagtgtgataagacttggttgttgtagttatt 20935490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 25834912 - 25834961
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  25834912 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 25834961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 28508912 - 28508961
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  28508912 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 28508961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 30306266 - 30306315
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  30306266 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 30306315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 43573178 - 43573129
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  43573178 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 43573129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 8560852 - 8560800
Alignment:
Q  225 ccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||||||| |||||||| |||||||||||||  |||||||| ||||    
T  8560852 ccatgtagccgacccaacttagtgggataagacttggttgttgttgttgttgt 8560800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 12474975 - 12474927
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  12474975 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12474927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 38452734 - 38452686
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  38452734 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 38452686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 41763091 - 41763043
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  41763091 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 41763043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 451696 - 451641
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| || ||| ||||||  |||||||| |||||    
T  451696 atccatgtagccgaccccacttagtgggacaaggcttggttgttgttgttgttgta 451641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 18959145 - 18959192
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttg 270  Q
    ||||||||||| |||||||||||||| |||||| |||||| |||||||    
T  18959145 atccatgtagctgaccccacttagtgggataaggcttggttattgttg 18959192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 25384703 - 25384758
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||| ||| ||||||||| |||||| ||||||| |||||||| |||||    
T  25384703 atccatgtagccaacctcacttagtgggataaggcttggtggttgttgttgttgta 25384758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 3866306 - 3866360
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||  |||||| ||||||  |||||||| ||||    
T  3866306 atccatgtagccgaccccacttagtaggataaggcttggttgttgttgttgttgt 3866360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 12470942 - 12470896
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||| |||||| |||||| ||||||| ||||||||    
T  12470942 catgtagccgaccccatttagtgggataaggcttggtggttgttgtt 12470896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 12489847 - 12489801
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  12489847 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 12489801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 12734934 - 12734988
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||| ||||||||||||||| |||||| ||||||  |||||||| ||||    
T  12734934 atccatgtagtcgaccccacttagtgggataaggcttggttgttgttgttgttgt 12734988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 28218572 - 28218514
Alignment:
Q  162 gggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatct 220  Q
    ||||||||||||||||||||||||||| || || | |||| ||||| |||||| |||||    
T  28218572 gggtaaaaggagagggttgtgttaggcttcaacggtcaacgtaaaattttgtctaatct 28218514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 35643185 - 35643231
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  35643185 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 35643231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 44437766 - 44437720
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  44437766 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 44437720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 2610822 - 2610871
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||| |||||||||||||||| |||||| ||||||  ||||||||    
T  2610822 atccatgtaaccgaccccacttagtgagataaggcttggttgttgttgtt 2610871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 7326208 - 7326159
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||| ||||||||||||| |||||| ||||||  ||||||||    
T  7326208 atccatgtagccaaccccacttagtgggataaggcttggttgttgttgtt 7326159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 17429287 - 17429332
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    ||||||||||||||||||||||| |||||| ||||||  |||||||    
T  17429287 catgtagccgaccccacttagtgagataaggcttggttgttgttgt 17429332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 937209 - 937257
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    ||||||||||| |||| ||||| ||| ||||||||||||| ||||||||    
T  937209 atccatgtagctgacctcacttggtgggataagacttggttattgttgt 937257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 8181014 - 8181046
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  8181014 atccatgtagccgaccccacttagtgggataag 8181046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 15775892 - 15775844
Alignment:
Q  224 tccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||  ||||| ||||||  ||||||||    
T  15775892 tccatgtagccgaccccacttagtggaataaggcttggttgttgttgtt 15775844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 16521055 - 16521023
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  16521055 atccatgtagccgaccccacttagtgggataag 16521023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 19863468 - 19863520
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttatt 275  Q
    ||||||||||||| |||||||||||| |||||  ||||||  |||||||||||    
T  19863468 atccatgtagccgtccccacttagtgggataaagcttggttgttgttgttatt 19863520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 19867800 - 19867852
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttatt 275  Q
    ||||||||||||| |||||||||||| |||||  ||||||  |||||||||||    
T  19867800 atccatgtagccgtccccacttagtgggataaagcttggttgttgttgttatt 19867852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 19872701 - 19872753
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttatt 275  Q
    ||||||||||||| |||||||||||| |||||  ||||||  |||||||||||    
T  19872701 atccatgtagccgtccccacttagtgggataaagcttggttgttgttgttatt 19872753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 36183685 - 36183733
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||  |||||| ||||||  |||||||    
T  36183685 atccatgtagccgaccccacttagtaggataaggcttggttgttgttgt 36183733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 224
Target Start/End: Complemental strand, 51450863 - 51450772
Alignment:
Q  133 acaatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  51450863 acaatcctgccaaggccggtcccaagcccgggtaaaaggagagggttgtgttaggcctcgacagccaacgtaaaactttgtcgaatatctat 51450772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 52136315 - 52136404
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| |||||||||||| |||||||||    
T  52136315 aatcctgccaaggccggtcccaagcccgggtaaaaggagagggttgtgttaggccttgatagccaacgtaaaactttgtcgaatctctat 52136404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 31566356 - 31566267
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||  |||||||||    
T  31566356 aatcctgccaaagccggtcccaagcccgggtaaaaggagagggttgtgttaggcctcgacagccaacgtagaactttgtagaatctctat 31566267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 7023147 - 7023236
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||||| |||| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  7023147 aatcctgctaaggtcggtcccaagcccaggtaaaaggagagggttgtgttaggcctcaacagccaacgtaaaactttatcaaatctctat 7023236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 224
Target Start/End: Original strand, 9256258 - 9256348
Alignment:
Q  134 caatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||||  ||||||||| || || | ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| |||||||||    
T  9256258 caatcctatcaaggccggccctaagctcgggtaaaaggagagggttgtgttaggcctcaacagccaacgtaaaattttgtcgaatctctat 9256348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 5169066 - 5169121
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  5169066 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 5169121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 48508469 - 48508524
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  48508469 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 48508524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 54128613 - 54128668
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||| ||||||||||||||| |||||| ||||||  ||||||||||||||    
T  54128613 atccatgtaggcgaccccacttagtgggataaggcttggttgttgttgttattgta 54128668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 12096753 - 12096699
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  12096753 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 12096699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 39512776 - 39512826
Alignment:
Q  222 tatccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  39512776 tatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 39512826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 14415305 - 14415260
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||    
T  14415305 catgtagccgaccccacttagtgggataagacttggttgttgttgt 14415260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 52139034 - 52139083
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  52139034 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 52139083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 53519814 - 53519863
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  53519814 atccatgtagccgaccccacttagtgagataaggcttggttgttgttgtt 53519863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 311354 - 311302
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    ||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  311354 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 311302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 31566209 - 31566161
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  31566209 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31566161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 38060948 - 38060996
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| ||||||| |||||  |||||||    
T  38060948 atccatgtagccgaccccacttagtgggataagaattggttgttgttgt 38060996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 41529995 - 41530034
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  41529995 atccatgtagccgaccccacttagtgggataaggcttggt 41530034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 52927896 - 52927857
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  52927896 atccatgtagccgaccccacttagtgggataaggcttggt 52927857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 7895928 - 7895874
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||||||||||||||| || |||||| ||||||  |||||||| ||||    
T  7895928 atccatgtagccgaccccacttaatgggataaggcttggttgttgttgttgttgt 7895874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 24778657 - 24778619
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttgg 261  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  24778657 atccatgtagccgaccccacttagtgggataaggcttgg 24778619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 35032811 - 35032765
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| |||||| |||||| |||| ||||    
T  35032811 catgtagccgaccccacttagtgggataaggcttggttattgatgtt 35032765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 40991665 - 40991703
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttgg 261  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  40991665 atccatgtagctgaccccacttagtgagataagacttgg 40991703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 45374525 - 45374471
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||| |||||||||||||| |||||| ||||||  |||||||| ||||    
T  45374525 atccatgtagctgaccccacttagtgggataaggcttggttgttgttgttgttgt 45374471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 47555380 - 47555326
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||| ||||||||||||| |||||| ||||||  |||||||| ||||    
T  47555380 atccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgttgt 47555326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 53262379 - 53262429
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  53262379 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 53262429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 11316281 - 11316350
Alignment:
Q  151 gtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatct 220  Q
    ||||||| ||| | |||||||||| ||||||||||| ||| |||| ||||  |||| |||||||||||||    
T  11316281 gtcccaagccctgctaaaaggagacggttgtgttagaccttgacatccaaagtaaagctttgtcaaatct 11316350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 21862789 - 21862752
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttg 260  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  21862789 atccatgtagccgaccccacttagtgagataaggcttg 21862752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 37083335 - 37083290
Alignment:
Q  228 tgtagccgaccccacttagtgtgataagacttggtgattgttgtta 273  Q
    ||||||||||||||||||||| |||||| ||||||  |||||||||    
T  37083335 tgtagccgaccccacttagtgggataaggcttggttgttgttgtta 37083290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 45834648 - 45834599
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||| ||||||||||||| |||||| ||||||  ||||||||    
T  45834648 atccatgtagccaaccccacttagtgggataaggcttggttgttgttgtt 45834599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 48532196 - 48532241
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||| |||||| ||||||  ||||||||    
T  48532196 atgtagccgaccccacttagtgggataaggcttggttgttgttgtt 48532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 49503616 - 49503567
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||| |||||||| |||||| ||||||  ||||||||    
T  49503616 atccatgtagccgaccctacttagtgggataaggcttggttgttgttgtt 49503567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 52156132 - 52156083
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| || |||  ||||||||    
T  52156132 atccatgtagccgaccccacttagtgggataaggctcggttgttgttgtt 52156083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 15296141 - 15296189
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||| ||||||||||||||||| |||||| ||||||  |||||||    
T  15296141 atccatgtggccgaccccacttagtgggataaggcttggttgttgttgt 15296189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 31454266 - 31454222
Alignment:
Q  230 tagccgaccccacttagtgtgataagacttggtgattgttgttat 274  Q
    ||||||||||||||||||| |||||| ||||||  ||||||||||    
T  31454266 tagccgaccccacttagtgggataaggcttggttgttgttgttat 31454222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 32350187 - 32350151
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagactt 259  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  32350187 atccatgtagccgacccaacttagtgagataagactt 32350151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 45486897 - 45486845
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttatt 275  Q
    ||||||||||||| |||||||||||| |||||  ||||||  |||||||||||    
T  45486897 atccatgtagccggccccacttagtgggataaagcttggttgttgttgttatt 45486845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 49042171 - 49042219
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||| ||| |||||| ||||||  |||||||    
T  49042171 atccatgtagccgaccccacttggtgagataaggcttggttgttgttgt 49042219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 6e-34; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 32079305 - 32079394
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  32079305 aatcctgccaaggccggtctcaagcccgggtaaaaggagagggttgtgttaggcctcgacagccaacgtaaaactttgtcgaatctctat 32079394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 49350568 - 49350479
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  49350568 aatcctgccaaggccggtcccaagcccaggtaaaaggagagggttgtgttaggcctcgacagccaacgtaaaactttgtcgaatctctat 49350479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 52920979 - 52921068
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  52920979 aatcctgccaaggccggtcccaagcccgggtaaaaggagagggttgtgttaggccttgacagccaacataaaactttgtcgaatctctat 52921068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 4001850 - 4001935
Alignment:
Q  139 ctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  4001850 ctgccaaggccggccccaagcccgggtaaaaggagagggttgtgttaggcctcgacagccaacgtaaaactttgtcgaatctctat 4001935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 49527530 - 49527443
Alignment:
Q  137 tcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||| |||||||||||  |||||||||    
T  49527530 tcctgccaaggccggtcccaagctcgggtaaaaggagaggattgtgttaggcctcgacagccaacgtaaaactttgttgaatctctat 49527443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 51850761 - 51850850
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||    
T  51850761 aatcctgccaaggccagtcccaagcctgggtaaaaggagagggttgtgttaggcctcgacatccaacataaaacttcgtcgaatctctat 51850850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 9599915 - 9599997
Alignment:
Q  142 ccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  9599915 ccaaggcgggtcccaagctcgggtaaaaggagagggttgtgttaggcctcgacagccaacgtaaaactttgtcggatctctat 9599997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 8670878 - 8670813
Alignment:
Q  159 cccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||    
T  8670878 cccgggtaaaaggagagggttgtgttaggcctcgacagccaatgtaaaactttgtcgaatctctat 8670813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 52815018 - 52815086
Alignment:
Q  145 aggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgt 213  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  52815018 aggccggtcccaaactcgggtaaaaggagagggttgtgttaggccttgacaaccaacgtaaaactttgt 52815086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 1290285 - 1290198
Alignment:
Q  137 tcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||| |||||| |||||||||| ||||||||| |  |||||||||    
T  1290285 tcctgccaaggccggtcccaagcccgggtaaaaaaagagggttgtgtcaggccttgacagccaacgtaaaactttttagaatctctat 1290198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 15424604 - 15424517
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||| |||||||||||||||| || || |||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  15424604 aatcctaccaaggccggtcccaagcc-ggataaaaggagagg-ttgtgttaggccacgacaaccaacgtaaaactttgtcaaatctctat 15424517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 52463154 - 52463095
Alignment:
Q  165 taaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  52463154 taaaaggagagggttgtgttagacctcgactgccaacttaaaactttgtcgaatctctat 52463095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 6985696 - 6985621
Alignment:
Q  147 gccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||| ||||| | ||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||    
T  6985696 gccggtcccaagcccggatgaaaggagagggttgtgttaggc--cgacagccaacgtaaaactttgtcgaatctctat 6985621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 6039612 - 6039675
Alignment:
Q  161 cgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||||||||||| |||||| ||||||||| ||||||||| |||||||||||  |||||||||    
T  6039612 cgggtaaaaggagaaggttgtattaggcctcaacagccaacgtaaaactttgttgaatctctat 6039675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 4029356 - 4029410
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||| ||||    
T  4029356 atccatgtagccgaccccacttagtgggataagacttggttgttgttgttgttgt 4029410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 16538848 - 16538782
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaac 201  Q
    ||||||||||||| ||||||||| | | |||||||||||| ||||||||||| |||||||| |||||    
T  16538848 aatcctgccaaggtcggtcccaagctctggtaaaaggagatggttgtgttagacctcgacaaccaac 16538782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 28090742 - 28090693
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||    
T  28090742 atccatgtagccgaccccacttagtgggataagacttggttgttgttgtt 28090693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 8203183 - 8203143
Alignment:
Q  222 tatccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  8203183 tatccatgtagccgaccccacttagtgtgataagatttggt 8203143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 21769759 - 21769711
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    ||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  21769759 atccatgtagccgaccccacttagtgtgataaggcttggttgttgttgt 21769711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 28533701 - 28533749
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||    
T  28533701 atccatgtagccgaccccacttagtgggataagacttggttgttgttgt 28533749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 26299302 - 26299341
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  26299302 atccatgtagccgaccccacttagtgggataagacttggt 26299341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 43481846 - 43481791
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  43481846 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 43481791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 25979279 - 25979225
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  25979279 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 25979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 30202178 - 30202124
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  30202178 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 30202124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 1210979 - 1211028
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  1210979 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 1211028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 1704861 - 1704910
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||| || ||||||||||||||||||||||||||||  ||||||||    
T  1704861 atccatgttgctgaccccacttagtgtgataagacttggttgttgttgtt 1704910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 8796443 - 8796492
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  8796443 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 8796492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 29577486 - 29577535
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  29577486 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 29577535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 41560463 - 41560512
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  41560463 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 41560512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 44941824 - 44941775
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  44941824 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 44941775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 52561637 - 52561584
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattg 276  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||| |||||    
T  52561637 atccatgtagccgaccccacttagtgggataaggcttggttgttgttggtattg 52561584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 34444594 - 34444646
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgttattgtag 279  Q
    |||||||||||||||||||||| |||||| ||||||  |||||||| ||||||    
T  34444594 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgtag 34444646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 38758067 - 38758019
Alignment:
Q  224 tccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  38758067 tccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 38758019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 38807718 - 38807670
Alignment:
Q  224 tccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  38807718 tccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 38807670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 49347441 - 49347393
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  49347441 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 49347393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 52921314 - 52921362
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  52921314 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 52921362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 2914171 - 2914116
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||| ||||||||||||| |||||| ||||||  |||||||| |||||    
T  2914171 atccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgttgta 2914116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 4318893 - 4318838
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| || ||| ||||||  |||||||| |||||    
T  4318893 atccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgttgta 4318838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 22175379 - 22175418
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  22175379 atccatgtagccgaccccacttagtgggataaggcttggt 22175418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 37462924 - 37462885
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  37462924 atccatgtagccgaccccacttagtgggataaggcttggt 37462885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 51602290 - 51602345
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||| ||||||||||||| |||||| ||||||  |||||||| |||||    
T  51602290 atccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgttgta 51602345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 4707266 - 4707220
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  4707266 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 4707220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 260
Target Start/End: Complemental strand, 19908084 - 19908046
Alignment:
Q  222 tatccatgtagccgaccccacttagtgtgataagacttg 260  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  19908084 tatccatgtagccgaccccacttagtgggataaggcttg 19908046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 27847849 - 27847799
Alignment:
Q  222 tatccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||| | ||||||||| |||||| |||||| |||||||||    
T  27847849 tatccatgtagccgatctcacttagtgggataaggcttggtcattgttgtt 27847799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 41165516 - 41165570
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| || ||| ||||||  |||||||| ||||    
T  41165516 atccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgttgt 41165570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 51440810 - 51440764
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||| |||||||||||||||| |||||||||||||  ||||||||    
T  51440810 catgtaaccgaccccacttagtgggataagacttggttgttgttgtt 51440764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 696508 - 696553
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||| |||||| ||||||  ||||||||    
T  696508 atgtagccgaccccacttagtgggataaggcttggttgttgttgtt 696553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 4380193 - 4380241
Alignment:
Q  222 tatccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||| |||||||| |||||||||||||  |||||||    
T  4380193 tatccatgtagccgaccc-acttagtgggataagacttggttgttgttgt 4380241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 9592968 - 9593017
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| || |||||| ||||||  ||||||||    
T  9592968 atccatgtagccgaccccacttaatgggataaggcttggttgttgttgtt 9593017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 15086156 - 15086205
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||| ||||||||||||| |||||| ||||||  ||||||||    
T  15086156 atccatgtagccaaccccacttagtgggataaggcttggttgttgttgtt 15086205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 22090330 - 22090379
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||| |||| |||||| ||||||  ||||||||    
T  22090330 atccatgtagccgaccccactaagtgggataaggcttggttgttgttgtt 22090379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 29129020 - 29129057
Alignment:
Q  225 ccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  29129020 ccatgtagccgaccccacttagtgagataaggcttggt 29129057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 34792397 - 34792348
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| || |||||| ||||||  ||||||||    
T  34792397 atccatgtagccgaccccacttaatgggataaggcttggttgttgttgtt 34792348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 37311803 - 37311754
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| || ||| ||||||  ||||||||    
T  37311803 atccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgtt 37311754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 42539260 - 42539211
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||| ||||||||||||||| || ||| |||||| |||||||||    
T  42539260 atccatgtagacgaccccacttagtgggaaaaggcttggttattgttgtt 42539211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 44751718 - 44751767
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||| ||||||||| |||||| ||||||  ||||||||    
T  44751718 atccatgtagccgacctcacttagtgggataaggcttggttgttgttgtt 44751767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 4590580 - 4590548
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  4590580 atccatgtagccgaccccacttagtgggataag 4590548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 5690480 - 5690428
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgttattgtag 279  Q
    |||||| |||||| |||||||| ||||||| |||||| || ||||||||||||    
T  5690480 atgtagtcgaccctacttagtgagataagatttggtggtttttgttattgtag 5690428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 12231592 - 12231640
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||  |||||| ||||||  |||||||    
T  12231592 atccatgtagccgaccccacttagtaggataaggcttggttgttgttgt 12231640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 25715374 - 25715326
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||| ||||||||| |||||| ||||||  |||||||    
T  25715374 atccatgtagccgacctcacttagtgggataaggcttggttgttgttgt 25715326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 32404574 - 32404542
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  32404574 atccatgtagccgaccccacttagtgggataag 32404542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 37430468 - 37430412
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgtag 279  Q
    |||||| ||||||| ||||||||||| |||||| ||||||  |||||||| ||||||    
T  37430468 atccatatagccgatcccacttagtgagataaggcttggttgttgttgttgttgtag 37430412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 40568458 - 40568410
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||| ||||||||||||| |||||| ||||||  |||||||    
T  40568458 atccatgtagccaaccccacttagtgggataaggcttggttgttgttgt 40568410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 42337790 - 42337838
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||| ||||||||||||| |||||| ||||||  |||||||    
T  42337790 atccatgtagccaaccccacttagtgggataaggcttggttgttgttgt 42337838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 46423264 - 46423232
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  46423264 atccatgtagccgaccccacttagtgggataag 46423232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 50830683 - 50830643
Alignment:
Q  222 tatccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    ||||||||||||||||||||||||||| | |||| ||||||    
T  50830683 tatccatgtagccgaccccacttagtggggtaaggcttggt 50830643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 51444629 - 51444589
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagag 175  Q
    ||||||||||| ||||||||||| | |||||||||||||||    
T  51444629 aatcctgccaaagccggtcccaagcacgggtaaaaggagag 51444589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 52901039 - 52901079
Alignment:
Q  232 gccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||| |||||| ||||||| ||||||||    
T  52901039 gccgaccccacttagtgggataaggcttggtggttgttgtt 52901079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 20430664 - 20430575
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  20430664 aatcctgccaaggccggtcccaagctcgggtaaaaggagagggttgtgttaggcctcgacagccaacgtaaaactttgttgaatctctat 20430575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 6079585 - 6079664
Alignment:
Q  145 aggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||||||    
T  6079585 aggccggtcccaagcccgggtaaaaggagagggttgcgttaggcctcgacagtcaacgtaaaactttgtcgaatctctat 6079664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 3206507 - 3206458
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  3206507 atccatgtagccgaccccacttagtgggataagacttggttattgttgtt 3206458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 28085610 - 28085665
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  28085610 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 28085665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 34553 - 34504
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||||||||    
T  34553 atccatgtagctgaccccacttagtgggataagacttggttgttgttgtt 34504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 12890809 - 12890858
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  12890809 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 12890858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 26489368 - 26489429
Alignment:
Q  162 gggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctcta 223  Q
    ||||| ||||||||||||||||||| |||||||| ||||| ||||| ||||||  |||||||    
T  26489368 gggtataaggagagggttgtgttagtcctcgacaaccaacgtaaaattttgtcgcatctcta 26489429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 5258196 - 5258140
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgtag 279  Q
    ||||| |||||||||||||||||||| |||||| ||||||  |||||||| ||||||    
T  5258196 atccacgtagccgaccccacttagtgggataagtcttggttgttgttgttgttgtag 5258140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 6056382 - 6056338
Alignment:
Q  180 gtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||    
T  6056382 gtgttaggtctcgacagccaacgtaaaactttatcaaatctctat 6056338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 9707004 - 9707052
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  9707004 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 9707052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 33730199 - 33730247
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  33730199 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 33730247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 34934878 - 34934830
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  34934878 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 34934830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 608395 - 608434
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  608395 atccatgtagccgaccctacttagtgggataagacttggt 608434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 2545017 - 2544947
Alignment:
Q  143 caaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgt 213  Q
    ||||||| ||||||||   ||||||||||||| ||||||||||| | | ||||| |||| |||||||||||    
T  2545017 caaggccagtcccaaatttgggtaaaaggagaaggttgtgttagacattgacagtcaacgtaaaactttgt 2544947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 12133950 - 12133901
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| || ||| ||||||  ||||||||    
T  12133950 atccatgtagccgaccccacttagtgagaaaaggcttggttgttgttgtt 12133901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 1615271 - 1615223
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||| || |||||| |||||||||||||  |||||||    
T  1615271 atccatgtagccgacctcatttagtgggataagacttggttgttgttgt 1615223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 6906875 - 6906839
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagactt 259  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  6906875 atccatgtagccgacccaacttagtgcgataagactt 6906839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 2078635 - 2078546
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||    
T  2078635 aatcctgccaaggccggtcccaagcccggataaaaggagagggttgtgttaggcctcgacagccaaagtaaaactttgtcgaatctctat 2078546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 10293772 - 10293688
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatc 219  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||| |||||||||||| ||||    
T  10293772 aatcctgccaaggccggtcccaaactcgggtaaaaggagagggttgtgttaggcctcgacatgcaacgtaaaactttgtcgaatc 10293688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 39668864 - 39668787
Alignment:
Q  147 gccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  39668864 gccggtcccaagcccgggtaaaaggtgagggttgtgttagtcctcgacagccaacgtaaaactttgtcgaatctctat 39668787  T

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Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 32489109 - 32489190
Alignment:
Q  143 caaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||||||| |||| | || ||||||||||||||||||||||| ||||||||| |||| |||||||||||| |||| ||||    
T  32489109 caaggccggttccaagctcgagtaaaaggagagggttgtgttagacctcgacagtcaacgtaaaactttgtcgaatccctat 32489190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 11069442 - 11069371
Alignment:
Q  153 cccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||| |||||  ||||||||||| |||||||||    
T  11069442 cccaagcccgggtaaaaggagagcgttgtgttaggcctcaacaaccaacgcaaaactttgtcgaatctctat 11069371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 25160 - 25231
Alignment:
Q  138 cctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaact 209  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||| ||||||| | ||||| | |||||||    
T  25160 cctgccaaggccggtcccaaatccgggtaaaaggagagaattgtgtcaggcctctatagccagcgtaaaact 25231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 2915544 - 2915489
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| |||||| ||||||||| |||||    
T  2915544 atccatgtagccgaccccacttagtgggataaggcttggttattgttgttgttgta 2915489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 18855841 - 18855892
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttat 274  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  18855841 atccatgtagccgaccccacttagtgggataagacttggttgttgttgttat 18855892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 22703892 - 22703833
Alignment:
Q  165 taaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||||||| ||| |||||    
T  22703892 taaaaggagagggttgtgttagacctcgacagccaacacaaaactttgtcgaatttctat 22703833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 3292666 - 3292719
Alignment:
Q  171 gagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||| ||||    
T  3292666 gagagggttgtgttaggcctcaacagccaacataaaactttgtcgaatcactat 3292719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 4496618 - 4496673
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  4496618 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 4496673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 7678711 - 7678762
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttat 274  Q
    |||||||||||||||||||||||||| ||||| |||||||  ||||||||||    
T  7678711 atccatgtagccgaccccacttagtgggataaaacttggttgttgttgttat 7678762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 408542 - 408493
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  408542 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 408493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 1287627 - 1287578
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| |||||| |||| ||||    
T  1287627 atccatgtagccgaccccacttagtgggataaggcttggttattgatgtt 1287578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 28976904 - 28976851
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgttattgtag 279  Q
    ||||||||||||||||||||||| |||||| ||||||  |||||||| ||||||    
T  28976904 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgtag 28976851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 29816616 - 29816665
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  29816616 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 29816665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 36551380 - 36551429
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  36551380 atccatgtagccgaccccacttagtgagataaggcttggttgttgttgtt 36551429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 3302078 - 3302126
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  3302078 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 3302126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 16347428 - 16347380
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    ||||||||||||||||| |||||||| |||||||||||||  |||||||    
T  16347428 atccatgtagccgaccctacttagtgggataagacttggttgttgttgt 16347380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 218100 - 218061
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  218100 atccatgtagccgaccccacctagtgggataagacttggt 218061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 4653489 - 4653540
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||| |||||||||||||||| |||||||||||||  |||||||| ||||    
T  4653489 catgtatccgaccccacttagtgagataagacttggttgttgttgttgttgt 4653540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 5558375 - 5558414
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  5558375 atccatgtagccgaccccacttagtgggataaggcttggt 5558414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 12492429 - 12492378
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  12492429 catgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 12492378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 14668005 - 14668044
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  14668005 atccatgtaaccgaccccacttagtgggataagacttggt 14668044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 30213809 - 30213848
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  30213809 atccatgtagccgaccccacttagtgggataaggcttggt 30213848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 32442173 - 32442119
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    ||||||||||||||| |||||||||| |||||| |||||| ||||||||| |||||    
T  32442173 atccatgtagccgactccacttagtgggataag-cttggttattgttgttgttgta 32442119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 38685201 - 38685240
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  38685201 atccatgtagccgaccccacttagtgggataaggcttggt 38685240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 41894307 - 41894362
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||| ||||||||||||| |||||||||| ||  |||||||| |||||    
T  41894307 atccatgtagccaaccccacttagtgggataagactttgttgttgttgttgttgta 41894362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 10639536 - 10639590
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||| ||| |||||| ||||||  |||||||| ||||    
T  10639536 atccatgtagccgaccccactttgtgggataaggcttggttgttgttgttgttgt 10639590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 14665950 - 14666000
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  14665950 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 14666000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 15588434 - 15588384
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||||| |||||||| |||||| ||||||||| |||||| ||||    
T  15588434 atgtagccgaccctacttagtgggataaggcttggtgatggttgttgttgt 15588384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 28411913 - 28411959
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  28411913 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 28411959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 7359309 - 7359260
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||| |||||||||||||| || ||||||||||  ||||||||    
T  7359309 atccatgtagctgaccccacttagtgggacaagacttggttgttgttgtt 7359260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 11675764 - 11675813
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||  |||||| ||||||  ||||||||    
T  11675764 atccatgtagccgaccccacttagttggataaggcttggttgttgttgtt 11675813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 13561434 - 13561397
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttg 260  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  13561434 atccatgtagccgaccccacttagtgggataaggcttg 13561397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 20457007 - 20457044
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttg 260  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  20457007 atccatgtagccgaccccacttagtgggataaggcttg 20457044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 38132570 - 38132619
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||| ||||||||||||||||| |||||| ||||||  ||||||||    
T  38132570 atccatgtggccgaccccacttagtgggataaggcttggttgttgttgtt 38132619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 39040990 - 39041027
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttg 260  Q
    ||||||||||||||||||||||| || |||||||||||    
T  39040990 atccatgtagccgaccccacttaatgggataagacttg 39041027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 42576244 - 42576293
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||| |||||||| |||||| ||||||  ||||||||    
T  42576244 atccatgtagccgacccgacttagtgggataaggcttggttgttgttgtt 42576293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 1275498 - 1275530
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  1275498 atccatgtagccgaccccacttagtgggataag 1275530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 3000977 - 3001021
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||| |||||| ||||||  |||||||    
T  3000977 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 3001021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 27386574 - 27386606
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  27386574 atccatgtagccgaccccacttagtgggataag 27386606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 18383 - 18472
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||||||| ||||| |||||||||||| |||||||||    
T  18383 aatcctgccaaagccggtcccaagcccgggtaaaaggagaaggttgtgttaagcctcgacaaccaacgtaaaactttgtcgaatctctat 18472  T

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Target: scaffold0024 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 48350 - 48265
Alignment:
Q  139 ctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||| || |||||| || |||||||||    
T  48350 ctgccaaggccggtcccaagtccgggtaaaaggagagggtttcgttaggcctcgacagccaacatataactttatcgaatctctat 48265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 16690 - 16603
Alignment:
Q  137 tcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||| |||||| |||||||||| ||||||||| |  |||||||||    
T  16690 tcctgccaaggccggtcccaagcccgggtaaaaaaagagggttgtgtcaggccttgacagccaacgtaaaactttttagaatctctat 16603  T

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Target: scaffold0001 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 440116 - 440173
Alignment:
Q  167 aaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  440116 aaaggagaggattgtgttaggcctcgacagccaacgtaaaactttgtcaaatctctat 440173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 54529556 - 54529628
Alignment:
Q  147 gccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatc 219  Q
    |||||||||||  | |||||||| ||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  54529556 gccggtcccaaggctgggtaaaaagagagggttgtgttaggcctcgacagccaacgtaacactttgtcgaatc 54529628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 35690505 - 35690559
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||| ||||    
T  35690505 atccatgtagccgaccccacttagtgggataagacttggtttttgttgttgttgt 35690559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 16000230 - 16000304
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgt 213  Q
    |||||| ||||| ||||||||||  |||||||||||||||||||||||||    |||||||| |||| |||||||||||    
T  16000230 aatcctaccaagaccggtcccaagtccgggtaaaaggagagggttgtgtt----ctcgacagtcaacgtaaaactttgt 16000304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 50238663 - 50238608
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  50238663 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 50238608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 50238749 - 50238694
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  50238749 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 50238694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 56375524 - 56375575
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttat 274  Q
    |||||||||||||||| ||||||||| |||||||||||||  ||||||||||    
T  56375524 atccatgtagccgacctcacttagtgggataagacttggttgttgttgttat 56375575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 21528522 - 21528576
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  21528522 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 21528576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 27453259 - 27453172
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||| |||||| || |||||| |||| |||||||||   |||| ||||| ||||||||||||||| |||||||||| | |||||||||    
T  27453259 aatcctaccaaggtcgatcccaagcccgagtaaaaggaa--ggttatgttatgcctcgacagccaacgtaaaactttgccgaatctctat 27453172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 30634154 - 30634100
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  30634154 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 30634100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 44719409 - 44719355
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||||||||| |||||||| |||||||||||||  |||||||| ||||    
T  44719409 atccatgtagccgaccctacttagtgggataagacttggttgttgttgttgttgt 44719355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 55007980 - 55008034
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  55007980 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 55008034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 436463 - 436512
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  436463 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 436512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 28236420 - 28236465
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||    
T  28236420 atgtagccgaccccacttagtgggataagacttggttgttgttgtt 28236465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 39100584 - 39100535
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  39100584 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 39100535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 45209253 - 45209204
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  45209253 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 45209204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 46153942 - 46153991
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  46153942 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 46153991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 47265243 - 47265194
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||| ||||||||| |||||| |||||| |||||||||    
T  47265243 atccatgtagccgacctcacttagtgggataaggcttggttattgttgtt 47265194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 49686929 - 49686966
Alignment:
Q  225 ccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||| |||||||||||||    
T  49686929 ccatgtagccgaccccacttagtgggataagacttggt 49686966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 52569563 - 52569514
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  52569563 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 52569514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 56130404 - 56130453
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  56130404 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 56130453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 31959862 - 31959814
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  31959862 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31959814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 46236723 - 46236771
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||  |||||| ||||||| |||||||    
T  46236723 atccatgtagccgaccccacttagtaggataaggcttggtggttgttgt 46236771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 48622591 - 48622543
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  48622591 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 48622543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 1211437 - 1211386
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||| || |||||||||||||  |||||||| ||||    
T  1211437 catgtagccgaccccacttaatgggataagacttggttgttgttgttgttgt 1211386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 6957832 - 6957887
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||| ||||||||||| |||||| ||||||  |||||||| |||||    
T  6957832 atccatgtagccgatcccacttagtgggataaggcttggttgttgttgttgttgta 6957887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 7544579 - 7544540
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  7544579 atccatgtagccgaccccacttagtgggataagccttggt 7544540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 7947171 - 7947210
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  7947171 atccatgtagccgaccccacttagtgggataaggcttggt 7947210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 27450228 - 27450189
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  27450228 atccatgtagccgaccccacttagtgggataaggcttggt 27450189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 39708667 - 39708706
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  39708667 atccatgtagtcgaccccacttagtgggataagacttggt 39708706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 50862865 - 50862904
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  50862865 atccatgtagccgaccccacttagtgggataaggcttggt 50862904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 1777065 - 1777011
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||||||||||||||| || |||||| ||||||  |||||||| ||||    
T  1777065 atccatgtagccgaccccacttaatgggataaggcttggttgttgttgttcttgt 1777011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 8286673 - 8286727
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||||| |||||||||||| |||||| ||||||  |||||||| ||||    
T  8286673 atccatgtagccgcccccacttagtgggataaggcttggttgttgttgttgttgt 8286727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 15665335 - 15665385
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtta 273  Q
    ||||||||||| |||||||||||||| |||||| ||||||  |||||||||    
T  15665335 atccatgtagctgaccccacttagtgggataaggcttggttgttgttgtta 15665385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 19061983 - 19061929
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||| ||||| |||||| ||||||  |||||||| ||||    
T  19061983 atccatgtagccgaccccacctagtgggataaggcttggttgttgttgttgttgt 19061929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 883625 - 883536
Alignment:
Q  135 aatcctgccaaggccggtcccaaacccgggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    ||||||||||||| |||| |||| | | |||||||| |||| ||||||||||||||  ||||  ||| ||| ||||| || |||||||||    
T  883625 aatcctgccaaggtcggttccaagctcaggtaaaagcagagagttgtgttaggccttcacagtaaacataatactttatcgaatctctat 883536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 12494897 - 12494946
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||| |||||||||||||| |||||| ||||||  ||||||||    
T  12494897 atccatgtagcggaccccacttagtgggataaggcttggttgttgttgtt 12494946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 19969415 - 19969464
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| || |||  ||||||||    
T  19969415 atccatgtagccgaccccacttagtgggataaggctcggttgttgttgtt 19969464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 20047670 - 20047707
Alignment:
Q  225 ccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  20047670 ccatgtagccggccccacttagtgggataagacttggt 20047707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 25427910 - 25427861
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||| ||||||||||||| || |||||||||||||  ||||||||    
T  25427910 atccatgtaaccgaccccacttaatgagataagacttggttgttgttgtt 25427861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 38475129 - 38475072
Alignment:
Q  167 aaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||| ||||| |||||||||||||| | ||||||| |||||| ||||| |||||||||    
T  38475129 aaagaagaggcttgtgttaggcctcaatagccaacgtaaaacgttgtcgaatctctat 38475072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 48174141 - 48174092
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||| |||||||||||||| |||||| ||||||  ||||||||    
T  48174141 atccatgtagcagaccccacttagtgggataaggcttggttgttgttgtt 48174092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 49939782 - 49939733
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| || |||  ||||||||    
T  49939782 atccatgtagccgaccccacttagtgggataaggctcggttgttgttgtt 49939733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 4441087 - 4441119
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  4441087 atccatgtagccgaccccacttagtgggataag 4441119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 15661920 - 15661888
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  15661920 atccatgtagccgaccccacttagtgggataag 15661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 23906345 - 23906297
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    ||||||||||| |||||||||||||| |||||| ||||||  |||||||    
T  23906345 atccatgtagctgaccccacttagtgggataaggcttggttgttgttgt 23906297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 26024899 - 26024859
Alignment:
Q  222 tatccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    ||||||||||||||||| ||||||||| |||||| ||||||    
T  26024899 tatccatgtagccgacctcacttagtgggataaggcttggt 26024859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 26037553 - 26037521
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  26037553 atccatgtagccgaccccacttagtgggataag 26037521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 31961311 - 31961259
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    ||||||||||||| ||||||||| |||||| ||||||  |||||||| |||||    
T  31961311 catgtagccgacctcacttagtgggataaggcttggttgttgttgttgttgta 31961259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 42309192 - 42309152
Alignment:
Q  151 gtcccaaacccgggtaaaaggagagggttgtgttaggcctc 191  Q
    ||||||| ||||| |||||||| ||||||||||||||||||    
T  42309192 gtcccaagcccggataaaaggatagggttgtgttaggcctc 42309152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 49738598 - 49738550
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    ||||||||||||||||||| |||||| |||||| ||||||  |||||||    
T  49738598 atccatgtagccgaccccatttagtgggataaggcttggttgttgttgt 49738550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 31869150 - 31869094
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgtag 279  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||||    
T  31869150 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttcttgtag 31869094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 36232115 - 36232159
Alignment:
Q  176 ggttgtgttaggcctcgacagccaacttaaaactttgtcaaatct 220  Q
    |||||||||||||||||||||||||| |||||||||||| |||||    
T  36232115 ggttgtgttaggcctcgacagccaacataaaactttgtcgaatct 36232159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 4604781 - 4604835
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||| ||||||||||||| |||||||||||||  |||||||| ||||    
T  4604781 atccatgtagccaaccccacttagtgggataagacttggttcttgttgttgttgt 4604835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 12841323 - 12841269
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  12841323 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 12841269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 28208376 - 28208322
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  28208376 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 28208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 29650618 - 29650672
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  29650618 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 29650672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 31005439 - 31005493
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  31005439 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 31005493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 31682650 - 31682596
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  31682650 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 31682596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 43491542 - 43491596
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  43491542 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 43491596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 2885770 - 2885721
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  2885770 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 2885721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 11594194 - 11594243
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  11594194 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 11594243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 27649014 - 27649063
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  27649014 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 27649063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 30089118 - 30089175
Alignment:
Q  163 ggtaaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatct 220  Q
    ||||||||||||||||||| ||| | ||||||||| ||| |||||||||||| |||||    
T  30089118 ggtaaaaggagagggttgtattaagtctcgacagctaacgtaaaactttgtcgaatct 30089175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 37618179 - 37618228
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  37618179 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 37618228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 39906420 - 39906371
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  39906420 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 39906371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 41483721 - 41483770
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| ||||||| |||||  ||||||||    
T  41483721 atccatgtagccgaccccacttagtgggataagatttggttgttgttgtt 41483770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 44855221 - 44855168
Alignment:
Q  224 tccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||||||||||||||||| |||||| ||||||  |||||||| ||||    
T  44855221 tccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 44855168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 48515509 - 48515558
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||| ||||||||||||||||||||| |||||||||||||  ||||||||    
T  48515509 atccgtgtagccgaccccacttagtgggataagacttggtttttgttgtt 48515558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 40979976 - 40979928
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgt 271  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  40979976 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 40979928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 46833228 - 46833173
Alignment:
Q  166 aaaaggagagggttgtgttaggcctcgacagccaacttaaaactttgtcaaatctctat 224  Q
    |||||||||||||||||||||||||   || ||||| |||||||||||| |||||||||    
T  46833228 aaaaggagagggttgtgttaggcct---caaccaacgtaaaactttgtcgaatctctat 46833173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 6263493 - 6263532
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  6263493 atccatgtagccgaccccacttagtgggataaggcttggt 6263532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 6375102 - 6375141
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  6375102 atccatgtagccgaccccacttagtgggataaggcttggt 6375141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 28708615 - 28708654
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  28708615 atccatgtagccgaccccacttagtgggataaggcttggt 28708654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 32631802 - 32631853
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  32631802 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 32631853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 35906249 - 35906210
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  35906249 atccatgtagccgaccccacttagtgggataaggcttggt 35906210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 46355904 - 46355865
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  46355904 atccatgtagccgaccccacttagtgagataaggcttggt 46355865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 14593989 - 14594035
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  14593989 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 14594035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 16013512 - 16013558
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  16013512 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 16013558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 21244328 - 21244282
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  21244328 catgtagccgaccccacttagtgggataaggcttggttgttgttgtt 21244282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 36869285 - 36869231
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    ||||||||||||||||||||||| || |||||| ||||||  |||||||| ||||    
T  36869285 atccatgtagccgaccccacttaatgggataaggcttggttgttgttgttgttgt 36869231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 40138996 - 40138958
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttgg 261  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  40138996 atccatgtagcagaccccacttagtgcgataagacttgg 40138958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 40630668 - 40630722
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| || ||| ||||||  |||||||| ||||    
T  40630668 atccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgttgt 40630722  T

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Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 42969932 - 42969986
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgt 277  Q
    |||||||||||||||||||||||||| |||||| ||| || |||| |||| ||||    
T  42969932 atccatgtagccgaccccacttagtgggataaggctttgttattgatgttgttgt 42969986  T

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Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 47652781 - 47652831
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtta 273  Q
    |||| ||||||||||||||||||||| |||||| ||||||  |||||||||    
T  47652781 atccctgtagccgaccccacttagtgggataaggcttggttgttgttgtta 47652831  T

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Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 1011284 - 1011329
Alignment:
Q  227 atgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||| |||||| ||||||  ||||||||    
T  1011284 atgtagccgaccccacttagtgggataaggcttggttgttgttgtt 1011329  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 6682590 - 6682631
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattg 267  Q
    ||||||||||||||||||||||| |||||| |||||| ||||    
T  6682590 catgtagccgaccccacttagtgggataaggcttggttattg 6682631  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 7273334 - 7273371
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttg 260  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  7273334 atccatgtagccgaccccacttagtgggataaggcttg 7273371  T

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Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 25891122 - 25891171
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||  |||||| ||||||  ||||||||    
T  25891122 atccatgtagccgaccccacttagtacgataaggcttggttgttgttgtt 25891171  T

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Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 42187675 - 42187724
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||| ||  ||||||||    
T  42187675 atccatgtagccgaccccacttagtgggataaggctttgttgttgttgtt 42187724  T

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Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 43281908 - 43281957
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| || ||| ||||||  ||||||||    
T  43281908 atccatgtagccgaccccacttagtgggacaaggcttggttgttgttgtt 43281957  T

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Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 45836530 - 45836481
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| || |||  ||||||||    
T  45836530 atccatgtagccgaccccacttagtgggataaggctcggttgttgttgtt 45836481  T

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Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 27893608 - 27893556
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||| |||||||| |||||| ||||||  |||||||| |||||    
T  27893608 catgtagccgaccctacttagtgcgataaggcttggttgttgttgttgttgta 27893556  T

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Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 34745984 - 34746020
Alignment:
Q  226 catgtagccgaccccacttagtgtgataagacttggt 262  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  34745984 catgtagccgaccccacttagtgggataaggcttggt 34746020  T

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Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 36652226 - 36652258
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataag 255  Q
    |||||||||||||||||||||||||| ||||||    
T  36652226 atccatgtagccgaccccacttagtgggataag 36652258  T

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Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 28937 - 28882
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgttattgta 278  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  28937 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgta 28882  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 31702 - 31751
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    |||||||||||||||||||||||||| |||||| ||||||  ||||||||    
T  31702 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 31751  T

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Target: scaffold0491 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 3671 - 3710
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggt 262  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  3671 atccaagtagccgaccccacttagtgggataagacttggt 3710  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 70415 - 70457
Alignment:
Q  165 taaaaggagagggttgtgttaggcctcgacagccaacttaaaa 207  Q
    |||||||||||| |||||||||||||||||||| ||| |||||    
T  70415 taaaaggagaggattgtgttaggcctcgacagctaacataaaa 70457  T

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Target: scaffold1318 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 565 - 602
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttg 260  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  565 atccatgtagccgaccccacttagtgggataaggcttg 602  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 25580 - 25531
Alignment:
Q  223 atccatgtagccgaccccacttagtgtgataagacttggtgattgttgtt 272  Q
    ||||||||||| |||||||||||||| |||||| ||||||  ||||||||    
T  25580 atccatgtagcggaccccacttagtgggataaggcttggttgttgttgtt 25531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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