View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17903_low_62 (Length: 295)
Name: NF17903_low_62
Description: NF17903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17903_low_62 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 47 - 277
Target Start/End: Original strand, 38118525 - 38118755
Alignment:
| Q |
47 |
gcttgggacaatgttgagtcaagacatactcaaagccttgcaatcaaagctcaccaaaattacacaatcaaacctccaacaacctcagatagagtcatag |
146 |
Q |
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| T |
38118525 |
gcttgggacaatgttgagtcaagacatactcaaagccttgcaatcaaagctcaccaaaattacacaatcaaacctccaacaacctcagatagagtcatag |
38118624 |
T |
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| Q |
147 |
ttttgctcaacacacaaaacactatagacaatgttcgtcattggtctgttaacaacgtatcatttttccttcctcacaccccttatcttgttgcacttaa |
246 |
Q |
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| T |
38118625 |
ttttgctcaacacacaaaacactatagacaatgttcgtcattggtctgttaacaacgtatcatttttccttcctcacaccccttatcttgttgcacttaa |
38118724 |
T |
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| Q |
247 |
agagaatataactggtgaattcaaccaaaca |
277 |
Q |
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| T |
38118725 |
agagaatataactggtgaattcaaccaaaca |
38118755 |
T |
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