View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17903_low_64 (Length: 290)
Name: NF17903_low_64
Description: NF17903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17903_low_64 |
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Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 8902996 - 8903259
Alignment:
| Q |
13 |
gagagagagtgtgacggagaagttgaaggagtttatgggggaatatactgatgatactcttgtggtatgattctcaatgttaacgattttgattgtgtag |
112 |
Q |
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| T |
8902996 |
gagagagagtgtgacggagaagttgaaggagtttatgggggaatatactgatgatactcttgtggtatgattctcaatgttaacgattttgattgtgtag |
8903095 |
T |
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| Q |
113 |
tgtgcgtttgtttttggattgttgaatgcatgatgtgaattagggttagggttccttgtaatgttgttgctattggaggtttgatttgattgattaatct |
212 |
Q |
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| T |
8903096 |
tgtgcgtttgtttttggattgttgaatgcatgatgtgaattagggttagggttccttgtgatgttgttactattggaggtttgatttgattgattaatct |
8903195 |
T |
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| Q |
213 |
ttgttttgtgttagtgataatgttttgggatatgatttgtgtgatgtgatttttatgatggaag |
276 |
Q |
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| T |
8903196 |
ttgctttgtgttagtgataatgttttgggatatgatttgtgtgatgtgatttttatgatggaag |
8903259 |
T |
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