View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17903_low_69 (Length: 276)
Name: NF17903_low_69
Description: NF17903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17903_low_69 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 2097879 - 2098129
Alignment:
| Q |
1 |
cctcatttccgcctctcctcctatttattcaggtgtttgcatttcctcaatgatgataggatggtaaaactgttgtatcttttcaatcatgatttcgtac |
100 |
Q |
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| T |
2097879 |
cctcatttccgcctctcctcctattttttcaggtgtttgcatttcctcaatgatgataggatggtaaaactgttgtatcttttcattcatgatttcgtac |
2097978 |
T |
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| Q |
101 |
ttttatactagtacttctgtgtcgtcctccaattaaaaaacaaatactccattattagggtatctccaacccgtggtattacattaccaggaaagtcacc |
200 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
2097979 |
ttttatactagtacttctgtgtcgtcctccaattataaaacaaatactccattattagggtatctccaacccgtggtattacattacgaggaaagtcacc |
2098078 |
T |
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| Q |
201 |
aacacgggaacaccaaacacgctgattataacctaccgccaactttctaat |
251 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||| |||| |
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| T |
2098079 |
aacacgggaacaccaaacacgctgattataacctatcgccaactttataat |
2098129 |
T |
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