View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17903_low_73 (Length: 265)
Name: NF17903_low_73
Description: NF17903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17903_low_73 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 40960303 - 40960534
Alignment:
| Q |
14 |
aaaatctaaccaactaaacaaacaccactaaattacctaagcatacaatgtaaaccatttgtaaaagaggcaaggtggacccgaattcttccccaaaaac |
113 |
Q |
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| T |
40960303 |
aaaatctaaccaactaaacaaacaccactaaattacctaagcatacaatgtaaaccattcgtaaaagaggcaaggtggacccgaattcttccc-aaaaac |
40960401 |
T |
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| Q |
114 |
aaactccaagacaaactttttatcgcctctacaacctccggcactttagatgctttaaaaccgaagattttgtcgttccttgccttccaagtgttggata |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40960402 |
aaactccaagacaaactttttatcgcctctacaacctccggcactttagatgctttaaaaccgaagattttgtcgttccttgccttccaagtgttggata |
40960501 |
T |
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| Q |
214 |
gaagtagtaaaggaattgttggtacatcttaaa |
246 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
40960502 |
gaagtagtaaaggaattgttggtacatcttaaa |
40960534 |
T |
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