View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17904_high_14 (Length: 206)

Name: NF17904_high_14
Description: NF17904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17904_high_14
NF17904_high_14
[»] chr2 (72 HSPs)
chr2 (130-195)||(20347330-20347395)
chr2 (130-195)||(30191046-30191111)
chr2 (130-195)||(32673009-32673074)
chr2 (130-195)||(6171323-6171388)
chr2 (5-64)||(11883621-11883680)
chr2 (6-61)||(20347162-20347217)
chr2 (130-183)||(11883746-11883799)
chr2 (7-64)||(11883923-11883980)
chr2 (7-64)||(30191222-30191279)
chr2 (5-61)||(24832329-24832385)
chr2 (5-64)||(20347461-20347520)
chr2 (6-64)||(30190922-30190980)
chr2 (7-59)||(6171156-6171207)
chr2 (1-61)||(18296693-18296753)
chr2 (135-186)||(26737655-26737706)
chr2 (5-64)||(40469726-40469785)
chr2 (5-59)||(6495723-6495777)
chr2 (10-64)||(15920781-15920835)
chr2 (130-184)||(40221489-40221543)
chr2 (6-59)||(29230281-29230334)
chr2 (130-183)||(40469607-40469660)
chr2 (5-61)||(6171456-6171512)
chr2 (5-61)||(8851582-8851638)
chr2 (5-64)||(26737480-26737537)
chr2 (6-61)||(2639482-2639537)
chr2 (130-185)||(15920911-15920966)
chr2 (10-61)||(18055316-18055367)
chr2 (6-61)||(26841586-26841641)
chr2 (7-61)||(26737781-26737835)
chr2 (10-59)||(29343584-29343633)
chr2 (7-64)||(40469427-40469484)
chr2 (5-61)||(2638818-2638874)
chr2 (8-60)||(6495468-6495519)
chr2 (5-61)||(26692394-26692450)
chr2 (5-61)||(37720202-37720258)
chr2 (6-61)||(5378660-5378715)
chr2 (6-61)||(7664247-7664302)
chr2 (9-63)||(15321394-15321446)
chr2 (9-64)||(18055050-18055103)
chr2 (10-61)||(26692820-26692871)
chr2 (135-186)||(32672847-32672897)
chr2 (6-61)||(41790912-41790967)
chr2 (5-64)||(43495307-43495366)
chr2 (10-64)||(43495481-43495535)
chr2 (7-61)||(7664673-7664727)
chr2 (130-184)||(17345854-17345908)
chr2 (6-64)||(17346032-17346089)
chr2 (7-61)||(17850978-17851032)
chr2 (7-61)||(26842238-26842292)
chr2 (5-63)||(32673141-32673198)
chr2 (4-61)||(7980003-7980059)
chr2 (8-61)||(18296077-18296130)
chr2 (7-60)||(32672842-32672895)
chr2 (5-61)||(8851146-8851202)
chr2 (130-186)||(15321512-15321567)
chr2 (7-59)||(40221313-40221364)
chr2 (6-61)||(5379959-5380014)
chr2 (130-177)||(6495544-6495591)
chr2 (10-61)||(7591204-7591255)
chr2 (10-64)||(17345736-17345788)
chr2 (7-61)||(7591850-7591904)
chr2 (12-60)||(6171334-6171383)
chr2 (135-184)||(11883628-11883676)
chr2 (135-184)||(11883927-11883975)
chr2 (12-64)||(17345859-17345912)
chr2 (8-61)||(18750126-18750178)
chr2 (135-184)||(24832336-24832384)
chr2 (12-60)||(26737657-26737706)
chr2 (135-184)||(40469730-40469778)
chr2 (7-64)||(43495602-43495658)
chr2 (135-183)||(17346037-17346083)
chr2 (12-59)||(40469607-40469655)
[»] scaffold1221 (3 HSPs)
scaffold1221 (130-195)||(1604-1669)
scaffold1221 (10-64)||(1781-1834)
scaffold1221 (7-61)||(1511-1564)
[»] scaffold0802 (3 HSPs)
scaffold0802 (130-195)||(1286-1351)
scaffold0802 (7-64)||(1118-1175)
scaffold0802 (7-64)||(1417-1474)
[»] chr8 (73 HSPs)
chr8 (130-195)||(15156051-15156116)
chr8 (130-195)||(34313930-34313995)
chr8 (130-195)||(43162403-43162468)
chr8 (130-195)||(12281247-12281312)
chr8 (6-64)||(15155882-15155940)
chr8 (130-195)||(765857-765922)
chr8 (7-64)||(37752413-37752470)
chr8 (130-195)||(41662269-41662334)
chr8 (1-64)||(43246173-43246236)
chr8 (7-64)||(12281423-12281480)
chr8 (7-64)||(15156182-15156239)
chr8 (130-183)||(37752237-37752290)
chr8 (6-64)||(16928941-16928999)
chr8 (7-64)||(34313765-34313820)
chr8 (7-64)||(16929239-16929296)
chr8 (7-64)||(41662400-41662457)
chr8 (7-64)||(43245871-43245928)
chr8 (130-183)||(43245994-43246047)
chr8 (130-190)||(9465695-9465755)
chr8 (1-61)||(9823361-9823421)
chr8 (5-64)||(18020085-18020142)
chr8 (9-64)||(765736-765791)
chr8 (5-64)||(12281122-12281181)
chr8 (5-64)||(41662105-41662164)
chr8 (130-184)||(18019910-18019964)
chr8 (7-61)||(22851390-22851444)
chr8 (7-61)||(37752084-37752138)
chr8 (7-64)||(43162234-43162290)
chr8 (6-61)||(13937389-13937444)
chr8 (7-61)||(9822748-9822802)
chr8 (7-61)||(23123338-23123392)
chr8 (7-61)||(39724048-39724102)
chr8 (7-60)||(3463946-3463999)
chr8 (6-59)||(13026634-13026687)
chr8 (11-64)||(43162536-43162588)
chr8 (9-61)||(74688-74739)
chr8 (130-182)||(74864-74916)
chr8 (5-61)||(13936721-13936776)
chr8 (135-183)||(16929067-16929115)
chr8 (29-64)||(9465871-9465906)
chr8 (10-61)||(13027281-13027332)
chr8 (9-64)||(23123514-23123567)
chr8 (6-61)||(34498555-34498610)
chr8 (1-64)||(37670253-37670314)
chr8 (7-57)||(3307338-3307388)
chr8 (130-184)||(7127828-7127882)
chr8 (6-47)||(767720-767760)
chr8 (14-63)||(7127660-7127708)
chr8 (14-63)||(9930837-9930885)
chr8 (135-184)||(16929243-16929291)
chr8 (130-184)||(33748161-33748217)
chr8 (28-64)||(74981-75017)
chr8 (5-57)||(6092775-6092825)
chr8 (130-186)||(22786933-22786989)
chr8 (9-61)||(25438794-25438846)
chr8 (6-61)||(3463641-3463694)
chr8 (10-61)||(34498125-34498176)
chr8 (6-61)||(37396707-37396762)
chr8 (5-59)||(17431285-17431339)
chr8 (7-61)||(37397145-37397199)
chr8 (10-56)||(37669958-37670004)
chr8 (130-184)||(37670132-37670186)
chr8 (5-59)||(41662519-41662573)
chr8 (5-54)||(9465605-9465653)
chr8 (130-183)||(11007654-11007707)
chr8 (135-184)||(12281427-12281475)
chr8 (12-64)||(18019915-18019968)
chr8 (10-59)||(22786843-22786892)
chr8 (1-61)||(20861638-20861698)
chr8 (5-61)||(24473768-24473824)
chr8 (5-61)||(25439126-25439181)
chr8 (130-174)||(43597913-43597957)
chr8 (158-186)||(43598754-43598782)
[»] chr4 (74 HSPs)
chr4 (134-195)||(3930346-3930407)
chr4 (130-195)||(13198727-13198792)
chr4 (130-195)||(22681702-22681767)
chr4 (130-193)||(11241558-11241621)
chr4 (5-64)||(13198903-13198962)
chr4 (6-64)||(16555514-16555572)
chr4 (6-64)||(3930477-3930534)
chr4 (130-183)||(16555695-16555748)
chr4 (1-61)||(9023680-9023740)
chr4 (5-61)||(24775783-24775839)
chr4 (5-64)||(18077199-18077258)
chr4 (6-61)||(56505692-56505747)
chr4 (7-61)||(16555817-16555871)
chr4 (130-184)||(49178639-49178693)
chr4 (7-64)||(11241389-11241446)
chr4 (6-59)||(22681881-22681934)
chr4 (131-184)||(27304894-27304947)
chr4 (130-186)||(8488307-8488363)
chr4 (8-64)||(22681576-22681631)
chr4 (130-182)||(35393599-35393651)
chr4 (6-61)||(5205987-5206042)
chr4 (5-64)||(35393773-35393831)
chr4 (6-61)||(39744465-39744520)
chr4 (6-61)||(50678778-50678833)
chr4 (10-64)||(13198606-13198660)
chr4 (7-64)||(3930179-3930235)
chr4 (7-60)||(5206231-5206283)
chr4 (8-64)||(7603146-7603200)
chr4 (4-61)||(28196773-28196830)
chr4 (10-59)||(47219203-47219252)
chr4 (11-64)||(49178813-49178866)
chr4 (5-61)||(293217-293273)
chr4 (130-182)||(5206138-5206190)
chr4 (8-64)||(8488479-8488534)
chr4 (5-61)||(36095815-36095871)
chr4 (5-57)||(39415528-39415580)
chr4 (6-61)||(28196345-28196400)
chr4 (10-61)||(36096475-36096526)
chr4 (6-61)||(45830196-45830251)
chr4 (7-61)||(169439-169493)
chr4 (5-62)||(8182171-8182229)
chr4 (7-64)||(27304718-27304773)
chr4 (7-61)||(32703650-32703704)
chr4 (7-61)||(50679424-50679478)
chr4 (8-64)||(8181992-8182049)
chr4 (135-184)||(8181996-8182045)
chr4 (135-184)||(8182173-8182222)
chr4 (135-184)||(16555818-16555866)
chr4 (7-60)||(23540253-23540306)
chr4 (8-61)||(25161879-25161932)
chr4 (12-64)||(27304890-27304943)
chr4 (5-61)||(8488186-8488242)
chr4 (6-58)||(9380744-9380796)
chr4 (5-61)||(26207746-26207802)
chr4 (5-61)||(32703223-32703279)
chr4 (5-61)||(43051252-43051308)
chr4 (135-185)||(5206230-5206278)
chr4 (6-61)||(9023243-9023298)
chr4 (6-61)||(11241661-11241715)
chr4 (7-61)||(4239366-4239420)
chr4 (7-61)||(9380307-9380361)
chr4 (130-184)||(13198603-13198656)
chr4 (5-61)||(169011-169068)
chr4 (8-61)||(11529169-11529222)
chr4 (135-184)||(16555520-16555568)
chr4 (135-184)||(18077203-18077251)
chr4 (5-54)||(39912052-39912101)
chr4 (8-61)||(43292038-43292091)
chr4 (135-184)||(49178817-49178865)
chr4 (157-186)||(54509114-54509143)
chr4 (12-59)||(16555695-16555743)
chr4 (5-61)||(26207359-26207414)
chr4 (158-186)||(39415251-39415279)
chr4 (5-61)||(43050605-43050661)
[»] chr1 (61 HSPs)
chr1 (130-195)||(17518470-17518535)
chr1 (130-195)||(47955429-47955494)
chr1 (130-195)||(8108888-8108953)
chr1 (130-195)||(41083031-41083096)
chr1 (6-64)||(47955605-47955663)
chr1 (5-64)||(13589656-13589714)
chr1 (5-64)||(47955304-47955363)
chr1 (6-64)||(17518302-17518359)
chr1 (6-64)||(31848189-31848247)
chr1 (6-64)||(41083208-41083265)
chr1 (10-63)||(8108724-8108777)
chr1 (130-183)||(22149580-22149633)
chr1 (5-61)||(8108993-8109049)
chr1 (5-61)||(39692000-39692056)
chr1 (5-59)||(22149701-22149755)
chr1 (5-61)||(49284407-49284463)
chr1 (9-64)||(17518599-17518653)
chr1 (5-64)||(22149401-22149458)
chr1 (10-64)||(1176839-1176893)
chr1 (7-61)||(6002237-6002291)
chr1 (7-61)||(48190771-48190825)
chr1 (5-61)||(20480166-20480221)
chr1 (6-61)||(26815119-26815174)
chr1 (10-61)||(28634157-28634208)
chr1 (6-61)||(32163043-32163098)
chr1 (6-61)||(44911024-44911079)
chr1 (6-61)||(48191355-48191410)
chr1 (5-56)||(50615238-50615289)
chr1 (5-56)||(50623066-50623117)
chr1 (7-61)||(9347126-9347180)
chr1 (7-61)||(26814694-26814748)
chr1 (5-59)||(50429654-50429708)
chr1 (7-61)||(50615621-50615674)
chr1 (7-61)||(50623449-50623502)
chr1 (10-63)||(1177016-1177069)
chr1 (7-64)||(41082909-41082966)
chr1 (5-61)||(48104676-48104732)
chr1 (5-61)||(48313792-48313848)
chr1 (6-61)||(19008750-19008805)
chr1 (7-62)||(20371352-20371406)
chr1 (130-181)||(31848016-31848067)
chr1 (10-61)||(50430081-50430132)
chr1 (7-57)||(1176717-1176766)
chr1 (3-61)||(4692433-4692491)
chr1 (7-61)||(21687025-21687079)
chr1 (7-61)||(27172116-27172169)
chr1 (7-61)||(48105116-48105170)
chr1 (7-60)||(20480613-20480665)
chr1 (10-59)||(42611616-42611665)
chr1 (8-61)||(47498495-47498547)
chr1 (5-57)||(999110-999161)
chr1 (9-61)||(6002894-6002946)
chr1 (135-183)||(22149701-22149748)
chr1 (5-57)||(27172545-27172597)
chr1 (5-57)||(31847893-31847945)
chr1 (10-57)||(31848019-31848067)
chr1 (5-61)||(33085669-33085725)
chr1 (8-59)||(46056904-46056953)
chr1 (130-182)||(46057016-46057068)
chr1 (10-58)||(46823846-46823894)
chr1 (9-61)||(50526472-50526524)
[»] chr7 (73 HSPs)
chr7 (130-195)||(3687523-3687588)
chr7 (130-195)||(9412191-9412256)
chr7 (5-64)||(9412021-9412080)
chr7 (7-64)||(3687353-3687411)
chr7 (6-64)||(9412322-9412380)
chr7 (7-64)||(3687653-3687710)
chr7 (130-183)||(13772793-13772846)
chr7 (7-64)||(13772898-13772955)
chr7 (8-64)||(8953886-8953941)
chr7 (6-60)||(6908212-6908265)
chr7 (5-61)||(3205093-3205149)
chr7 (5-61)||(17156965-17157021)
chr7 (5-61)||(20419324-20419380)
chr7 (5-61)||(22740154-22740210)
chr7 (5-61)||(44600135-44600191)
chr7 (6-61)||(13772640-13772695)
chr7 (6-61)||(33628660-33628715)
chr7 (130-184)||(6908391-6908445)
chr7 (7-61)||(44599489-44599543)
chr7 (6-55)||(23686723-23686772)
chr7 (7-64)||(29292038-29292095)
chr7 (9-62)||(34235977-34236030)
chr7 (7-61)||(5349733-5349784)
chr7 (5-61)||(13744233-13744288)
chr7 (5-61)||(37972396-37972452)
chr7 (6-61)||(10533033-10533088)
chr7 (6-61)||(13863312-13863367)
chr7 (10-61)||(18863970-18864021)
chr7 (9-64)||(29291808-29291863)
chr7 (6-61)||(37889259-37889314)
chr7 (8-58)||(5735253-5735303)
chr7 (7-61)||(9035293-9035347)
chr7 (8-61)||(18925322-18925373)
chr7 (10-64)||(27096339-27096392)
chr7 (10-64)||(27181911-27181964)
chr7 (7-61)||(37888833-37888887)
chr7 (5-59)||(38826915-38826969)
chr7 (8-62)||(39983700-39983754)
chr7 (7-61)||(48359320-48359373)
chr7 (10-55)||(5735553-5735598)
chr7 (135-184)||(18925230-18925279)
chr7 (7-60)||(23686421-23686473)
chr7 (130-183)||(33628501-33628554)
chr7 (7-60)||(35079960-35080012)
chr7 (20-61)||(35080223-35080263)
chr7 (7-60)||(38191566-38191619)
chr7 (6-62)||(9034866-9034922)
chr7 (5-53)||(13863964-13864012)
chr7 (130-186)||(15567164-15567220)
chr7 (7-59)||(18925062-18925114)
chr7 (5-57)||(29292920-29292972)
chr7 (5-57)||(38191260-38191312)
chr7 (135-183)||(38191388-38191435)
chr7 (6-61)||(8643766-8643821)
chr7 (10-61)||(20418891-20418942)
chr7 (10-61)||(22740591-22740641)
chr7 (9-64)||(33628397-33628451)
chr7 (4-55)||(42418588-42418639)
chr7 (6-61)||(46816311-46816366)
chr7 (33-63)||(5349489-5349519)
chr7 (132-182)||(5349641-5349691)
chr7 (10-60)||(6908485-6908534)
chr7 (130-184)||(8953721-8953775)
chr7 (135-181)||(27096170-27096216)
chr7 (135-181)||(27182087-27182133)
chr7 (135-184)||(9412028-9412076)
chr7 (153-185)||(5735398-5735430)
chr7 (156-184)||(15567017-15567045)
chr7 (5-61)||(16198977-16199033)
chr7 (7-55)||(27096047-27096094)
chr7 (7-55)||(27182209-27182256)
chr7 (5-61)||(30857904-30857960)
chr7 (5-61)||(36527382-36527437)
[»] chr6 (43 HSPs)
chr6 (130-195)||(18242022-18242087)
chr6 (5-64)||(18241852-18241911)
chr6 (6-64)||(3403986-3404044)
chr6 (130-183)||(3403867-3403920)
chr6 (130-183)||(30388242-30388295)
chr6 (130-184)||(2762606-2762660)
chr6 (7-61)||(3403717-3403771)
chr6 (130-184)||(10039844-10039898)
chr6 (6-56)||(21032285-21032335)
chr6 (130-186)||(33972188-33972244)
chr6 (6-61)||(10039675-10039729)
chr6 (5-64)||(21031977-21032035)
chr6 (4-61)||(7654548-7654605)
chr6 (7-64)||(11656779-11656836)
chr6 (12-64)||(12714436-12714488)
chr6 (5-57)||(31598732-31598783)
chr6 (6-61)||(33829636-33829691)
chr6 (10-64)||(3825530-3825583)
chr6 (130-184)||(11656603-11656657)
chr6 (6-64)||(13579648-13579705)
chr6 (7-61)||(33828990-33829044)
chr6 (10-63)||(30388360-30388413)
chr6 (5-62)||(33655114-33655170)
chr6 (7-64)||(33971994-33972050)
chr6 (5-61)||(2354810-2354866)
chr6 (5-64)||(23250590-23250648)
chr6 (5-60)||(31598274-31598328)
chr6 (130-185)||(33658563-33658618)
chr6 (130-184)||(13579529-13579583)
chr6 (7-57)||(30388062-30388111)
chr6 (12-64)||(2762611-2762664)
chr6 (12-64)||(10039840-10039893)
chr6 (12-63)||(11656608-11656660)
chr6 (14-64)||(21032107-21032158)
chr6 (8-59)||(22755091-22755142)
chr6 (5-54)||(2762782-2762829)
chr6 (7-61)||(10087858-10087912)
chr6 (7-61)||(33974299-33974353)
chr6 (135-184)||(3403722-3403770)
chr6 (135-184)||(3403990-3404038)
chr6 (135-184)||(11656783-11656831)
chr6 (12-60)||(18242033-18242082)
chr6 (7-64)||(18242153-18242210)
[»] chr5 (56 HSPs)
chr5 (130-195)||(25115880-25115945)
chr5 (130-195)||(25174972-25175037)
chr5 (5-64)||(18433313-18433372)
chr5 (6-64)||(25175148-25175206)
chr5 (6-62)||(25116060-25116116)
chr5 (130-183)||(18433138-18433191)
chr5 (130-182)||(26020573-26020625)
chr5 (7-61)||(18433015-18433069)
chr5 (5-61)||(26020448-26020504)
chr5 (130-182)||(34576988-34577040)
chr5 (130-181)||(5779742-5779793)
chr5 (130-184)||(5187645-5187699)
chr5 (6-63)||(5187828-5187885)
chr5 (6-63)||(25115756-25115813)
chr5 (6-63)||(25174848-25174905)
chr5 (5-61)||(19514963-19515019)
chr5 (6-57)||(16466746-16466797)
chr5 (6-61)||(22428933-22428987)
chr5 (6-61)||(22429196-22429250)
chr5 (7-61)||(18817611-18817665)
chr5 (10-60)||(23011383-23011432)
chr5 (6-64)||(33324835-33324893)
chr5 (10-60)||(41382896-41382945)
chr5 (7-60)||(23011079-23011131)
chr5 (10-59)||(31569910-31569958)
chr5 (5-61)||(41383167-41383222)
chr5 (6-61)||(12498566-12498621)
chr5 (6-61)||(12498928-12498983)
chr5 (6-61)||(18816951-18817006)
chr5 (6-61)||(26570728-26570783)
chr5 (6-61)||(26571164-26571219)
chr5 (5-59)||(34147512-34147566)
chr5 (7-61)||(34577164-34577217)
chr5 (6-59)||(43464194-43464246)
chr5 (10-61)||(9665560-9665609)
chr5 (7-59)||(37780744-37780796)
chr5 (10-61)||(11351427-11351478)
chr5 (7-53)||(12441320-12441364)
chr5 (13-64)||(16726084-16726135)
chr5 (10-61)||(21207229-21207280)
chr5 (7-58)||(22729008-22729058)
chr5 (135-186)||(23011381-23011430)
chr5 (10-61)||(34576870-34576920)
chr5 (130-184)||(9869739-9869793)
chr5 (135-184)||(5187831-5187879)
chr5 (7-60)||(9665828-9665879)
chr5 (130-179)||(12441196-12441245)
chr5 (135-184)||(18433020-18433068)
chr5 (8-61)||(22729440-22729492)
chr5 (8-57)||(25941018-25941067)
chr5 (5-60)||(9869558-9869611)
chr5 (5-61)||(11350806-11350861)
chr5 (7-59)||(12441042-12441093)
chr5 (5-61)||(37610200-37610255)
chr5 (5-61)||(37780318-37780373)
chr5 (5-61)||(43463754-43463809)
[»] chr3 (65 HSPs)
chr3 (130-195)||(10293730-10293795)
chr3 (130-195)||(20968886-20968951)
chr3 (7-64)||(10293906-10293963)
chr3 (5-64)||(20968716-20968775)
chr3 (5-58)||(17441066-17441119)
chr3 (130-183)||(18875012-18875065)
chr3 (5-62)||(47871121-47871177)
chr3 (130-182)||(9026855-9026907)
chr3 (130-184)||(13657622-13657676)
chr3 (7-61)||(20969019-20969073)
chr3 (7-64)||(18875188-18875245)
chr3 (5-61)||(53687886-53687942)
chr3 (6-61)||(40848961-40849016)
chr3 (7-61)||(3644783-3644837)
chr3 (6-60)||(18874881-18874935)
chr3 (6-60)||(45060872-45060926)
chr3 (11-60)||(4947263-4947312)
chr3 (7-60)||(8314013-8314066)
chr3 (7-64)||(10293608-10293665)
chr3 (7-63)||(17372298-17372354)
chr3 (7-55)||(45060596-45060644)
chr3 (10-61)||(27238900-27238951)
chr3 (6-61)||(36180990-36181045)
chr3 (6-61)||(48159896-48159951)
chr3 (7-61)||(3353128-3353181)
chr3 (6-60)||(8315083-8315136)
chr3 (6-56)||(42455789-42455839)
chr3 (7-57)||(42627550-42627599)
chr3 (7-61)||(42673296-42673349)
chr3 (7-60)||(1927772-1927825)
chr3 (133-182)||(4947384-4947433)
chr3 (130-183)||(45060774-45060826)
chr3 (10-61)||(3644720-3644772)
chr3 (133-185)||(18874885-18874936)
chr3 (5-61)||(26007180-26007235)
chr3 (10-64)||(1101087-1101141)
chr3 (10-61)||(9026739-9026789)
chr3 (10-61)||(14015964-14016014)
chr3 (10-61)||(23630035-23630086)
chr3 (5-60)||(53766580-53766635)
chr3 (130-184)||(1101091-1101144)
chr3 (6-60)||(1101182-1101236)
chr3 (10-60)||(3644538-3644588)
chr3 (130-184)||(3644721-3644775)
chr3 (7-61)||(9027033-9027086)
chr3 (10-64)||(14015697-14015751)
chr3 (130-184)||(17372474-17372528)
chr3 (8-61)||(17372594-17372645)
chr3 (7-61)||(21896511-21896564)
chr3 (10-64)||(26540694-26540747)
chr3 (7-61)||(42672978-42673031)
chr3 (7-61)||(47666335-47666389)
chr3 (7-61)||(48160333-48160387)
chr3 (12-64)||(4947386-4947439)
chr3 (12-60)||(10293735-10293784)
chr3 (130-182)||(14015873-14015926)
chr3 (135-184)||(18875192-18875240)
chr3 (6-59)||(47665910-47665963)
chr3 (130-186)||(17440880-17440936)
chr3 (12-59)||(18875017-18875065)
chr3 (6-61)||(21895656-21895712)
chr3 (8-60)||(22429159-22429211)
chr3 (5-61)||(40848519-40848574)
chr3 (6-61)||(47870822-47870877)
chr3 (158-190)||(47871117-47871149)
[»] scaffold0110 (3 HSPs)
scaffold0110 (130-185)||(45683-45738)
scaffold0110 (5-64)||(45535-45593)
scaffold0110 (6-64)||(45804-45861)
[»] scaffold0319 (4 HSPs)
scaffold0319 (5-64)||(6392-6451)
scaffold0319 (130-183)||(6575-6628)
scaffold0319 (7-64)||(6694-6750)
scaffold0319 (135-184)||(6399-6447)
[»] scaffold0192 (3 HSPs)
scaffold0192 (5-64)||(25366-25425)
scaffold0192 (130-183)||(25247-25300)
scaffold0192 (135-184)||(25370-25418)
[»] scaffold0001 (8 HSPs)
scaffold0001 (7-64)||(438930-438987)
scaffold0001 (130-181)||(439021-439072)
scaffold0001 (5-64)||(183660-183718)
scaffold0001 (6-64)||(439196-439254)
scaffold0001 (10-60)||(183367-183416)
scaffold0001 (130-181)||(183544-183595)
scaffold0001 (135-181)||(439203-439248)
scaffold0001 (135-184)||(438935-438983)
[»] scaffold0328 (2 HSPs)
scaffold0328 (7-61)||(6152-6206)
scaffold0328 (7-61)||(6795-6849)
[»] scaffold0002 (2 HSPs)
scaffold0002 (7-64)||(411923-411979)
scaffold0002 (130-176)||(412044-412090)
[»] scaffold0015 (3 HSPs)
scaffold0015 (130-186)||(16976-17032)
scaffold0015 (7-64)||(17153-17209)
scaffold0015 (7-64)||(16853-16908)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-64)||(205685-205743)
[»] scaffold0598 (2 HSPs)
scaffold0598 (9-59)||(6609-6659)
scaffold0598 (130-184)||(6752-6806)
[»] scaffold0376 (2 HSPs)
scaffold0376 (4-61)||(7452-7508)
scaffold0376 (7-64)||(7597-7653)
[»] scaffold0460 (1 HSPs)
scaffold0460 (5-57)||(328-380)
[»] scaffold0035 (2 HSPs)
scaffold0035 (8-64)||(72967-73023)
scaffold0035 (130-184)||(73086-73140)
[»] scaffold0535 (1 HSPs)
scaffold0535 (5-57)||(10010-10062)
[»] scaffold0041 (1 HSPs)
scaffold0041 (5-61)||(38695-38751)
[»] scaffold0176 (1 HSPs)
scaffold0176 (6-61)||(20043-20098)
[»] scaffold0069 (1 HSPs)
scaffold0069 (7-62)||(50506-50560)
[»] scaffold0017 (2 HSPs)
scaffold0017 (7-61)||(185274-185328)
scaffold0017 (8-61)||(184840-184893)
[»] scaffold0029 (1 HSPs)
scaffold0029 (5-62)||(9903-9960)


Alignment Details
Target: chr2 (Bit Score: 66; Significance: 2e-29; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 20347395 - 20347330
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20347395 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 20347330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 30191046 - 30191111
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30191046 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 30191111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 32673074 - 32673009
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32673074 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccctcacttatatt 32673009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 6171388 - 6171323
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  6171388 tgttcaattgcacttttgccccttatctttttgttaattgtgcgattttgcaccctcacttatatt 6171323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 11883621 - 11883680
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  11883621 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 11883680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 20347162 - 20347217
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20347162 aggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccc 20347217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 11883746 - 11883799
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11883746 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 11883980 - 11883923
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  11883980 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 11883923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 30191279 - 30191222
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  30191279 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 30191222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 24832329 - 24832385
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  24832329 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 24832385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 20347520 - 20347461
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  20347520 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 20347461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 30190922 - 30190980
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  30190922 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 30190980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 6171156 - 6171207
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6171156 ggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcacc 6171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18296753 - 18296693
Alignment:
Q  1 aaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  18296753 aaacaaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 26737706 - 26737655
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctc 186  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccctc 26737655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 40469785 - 40469726
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||| |||||||||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  40469785 aaggtttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctc 40469726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 6495777 - 6495723
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||    
T  6495777 aaggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 15920781 - 15920835
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttgcaccccctc 15920835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 40221543 - 40221489
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  40221543 tgttcaattgcgcttttgccccctatctttttgctaattgtgcgattttgcaccc 40221489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 29230281 - 29230334
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  29230281 aggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 40469660 - 40469607
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  40469660 tgttcaattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 6171512 - 6171456
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||||||||  ||||||| |||||||||||||    
T  6171512 aaggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccc 6171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 8851638 - 8851582
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  8851638 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 8851582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 26737480 - 26737537
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||    
T  26737480 aaggcttaattgcacttttctcct--atcttttgctaattgtgcgattttgcaccccctc 26737537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 2639537 - 2639482
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  2639537 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 2639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 15920966 - 15920911
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccct 185  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||    
T  15920966 tgttcaattgcacttttgccccctaactttttgctaattgtgcgattttacaccct 15920911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 18055367 - 18055316
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  18055367 ttaattgcactttttccctctaccttttgtcaattgtgcgattttgcacccc 18055316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 26841586 - 26841641
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  26841586 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26841641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 26737835 - 26737781
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| || |||||||||| ||| ||||||||||||||||||    
T  26737835 ggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccc 26737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 29343584 - 29343633
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  29343584 ttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 40469427 - 40469484
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||| | |||||||  |||||||||| |||||||||||||||||||||||||    
T  40469427 ggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctc 40469484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 2638818 - 2638874
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| ||||| || ||||||||||  |||||||||||||||||||||    
T  2638818 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 2638874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 6495468 - 6495519
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  6495468 gcttaattgcacttttcctccctatcttt-gttaattgtgcgattttgcaccc 6495519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26692394 - 26692450
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||| |||||||||||||| ||||||||  ||||| |||||||||||||||||||||    
T  26692394 aaggtttaattgcactttttccctctatagtttgtcaattgtgcgattttgcacccc 26692450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 37720202 - 37720258
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  37720202 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37720258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 5378660 - 5378715
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  5378660 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 5378715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 7664247 - 7664302
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||| | |||||||||||||||||||||    
T  7664247 aggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcacccc 7664302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 15321394 - 15321446
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccct 63  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||| |||||    
T  15321394 cttaattgcacttttcccct--atcttttgttaattgtgcaattttgcatcccct 15321446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 18055050 - 18055103
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  18055050 cttaattgcacttttcccc-cta-cttttgctaattgtgcgattttgcaccccctc 18055103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 26692871 - 26692820
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 26692820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 32672847 - 32672897
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctc 186  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  32672847 aattgcacttttgttccttatctttt-gttaattgtgcgattttgcaccctc 32672897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 41790967 - 41790912
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| |||| |||||  |||||||||||||||| ||||    
T  41790967 aggcttaattgcacttttcccccctatattttgccaattgtgcgattttgcccccc 41790912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 43495307 - 43495366
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||  |||| ||||| ||||||||||||||| || ||||||    
T  43495307 aaggcttaattgcacttttcccacctatattttgctaattgtgcgatttttcatcccctc 43495366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 43495535 - 43495481
Alignment:
Q  10 ttaattgcacttttcccctctatctttt-gttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  43495535 ttaattgcacttttcccc-ctatctttttgtcaattgtgcgattttgcaccccctc 43495481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 7664727 - 7664673
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| | ||||  ||||| |||||||||||||||||||||    
T  7664727 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 7664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 17345854 - 17345908
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||||||| |||||    
T  17345854 tgttcaattgcacttttgccccctatatttttgttaattgtgcgatttttcaccc 17345908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 17346089 - 17346032
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||| || | ||||||||| |||||||||||||||||||| ||||    
T  17346089 aggcttaattgcactttttcctt-tatcttttgctaattgtgcgattttgcacctcctc 17346032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 17850978 - 17851032
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 17851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 26842292 - 26842238
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||| |||||||||| || ||||||||||  |||||||||||||||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26842238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 32673198 - 32673141
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccct 63  Q
    |||| |||||||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  32673198 aaggtttaattgcactttttccc-ctatcttttgccaattgtgcgattttgcaccccct 32673141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 7980059 - 7980003
Alignment:
Q  4 caaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||| || |||||  |||| ||||||||||||||||||||||    
T  7980059 caaggcttaattgcactttttcc-tctatagtttgctaattgtgcgattttgcacccc 7980003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 18296077 - 18296130
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||| ||||||| || ||||||||||  |||||||||||||||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 32672842 - 32672895
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||||||||   |  |||||||||||||||||||||||||||||||    
T  32672842 ggcttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccc 32672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 8851146 - 8851202
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||| |||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  8851146 aaggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 8851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 15321512 - 15321567
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctc 186  Q
    |||| ||||||||||||||||| ||||||||| | || |||||||||||||||||||    
T  15321512 tgtttaattgcacttttgtcccctatcttttt-ccaactgtgcgattttgcaccctc 15321567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 40221313 - 40221364
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    ||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||    
T  40221313 ggcttaattgcacctttcccc-ctatcttttgctaattgttcgattttgcacc 40221364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 5380014 - 5379959
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  |||   |||||||||||||||||||||    
T  5380014 aggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcacccc 5379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 6495544 - 6495591
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattt 177  Q
    |||| ||||||||||||||||| ||||||||||| |||||||| ||||    
T  6495544 tgtttaattgcacttttgtcccctatctttttgccaattgtgctattt 6495591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 7591204 - 7591255
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||| ||||||| || ||||||||||  |||||||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 7591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 17345736 - 17345788
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||  |||||||| ||||| ||| |||||||||||||||    
T  17345736 ttaattgcacttttcccct--atcttttgctaattatgcaattttgcaccccctc 17345788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 7591904 - 7591850
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||  |||| |  ||||||||||| |||||||||||||||||||||    
T  7591904 ggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcacccc 7591850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 6171383 - 6171334
Alignment:
Q  12 aattgcacttttcccctctatctttt-gttaattgtgcgattttgcaccc 60  Q
    |||||||||||| |||  |||||||| |||||||||||||||||||||||    
T  6171383 aattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 6171334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 11883628 - 11883676
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  11883628 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 11883676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 11883975 - 11883927
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  11883975 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 11883927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 17345859 - 17345912
Alignment:
Q  12 aattgcacttttcccctctatctttt-gttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||| ||| |||| |||| ||||||||||||||||| |||||||||    
T  17345859 aattgcacttttgccccctatatttttgttaattgtgcgatttttcaccccctc 17345912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 18750178 - 18750126
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| ||||| ||||  ||||| |||||||||||||||||||||    
T  18750178 gcttaattgcacttctcccc-ctatagtttgtcaattgtgcgattttgcacccc 18750126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 24832336 - 24832384
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  24832336 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 24832384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  12 aattgcacttttcccctctatctttt-gttaattgtgcgattttgcaccc 60  Q
    |||||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 40469778 - 40469730
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  40469778 aattgcactttttccccctatctttt-gctaattgtgcgattttgcaccc 40469730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 43495658 - 43495602
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||| || | |||| ||||| |||||||||||||||||| ||||||    
T  43495658 ggcttaattgcactttcccac-ctatattttgctaattgtgcgattttgcatcccctc 43495602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 17346083 - 17346037
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  17346083 aattgcactttt-tcctttatctttt-gctaattgtgcgattttgcacc 17346037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 40469655 - 40469607
Alignment:
Q  12 aattgcacttttcccctctatc-ttttgttaattgtgcgattttgcacc 59  Q
    ||||||||||||||||  |||| ||||| ||||||||||||||||||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 62; Significance: 6e-27; HSPs: 3)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 1604 - 1669
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1604 tgttcaattgcacttttgtctcttatctttttgctaattgtgcgattttgcaccctcacttatatt 1669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 1834 - 1781
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  1834 ttaattgcacttttcccc-ctatcttttgtttattgtgcgattttgcacctcctc 1781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 1511 - 1564
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||| || |||||||||||  ||||||| |||||||||||||    
T  1511 ggcttaattgcactttttcc-tctatcttttgccaattgtgtgattttgcacccc 1564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 62; Significance: 6e-27; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 1351 - 1286
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1351 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccctcacttatatt 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 1118 - 1175
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  1118 ggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctc 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 1474 - 1417
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||||||    
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctc 1417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 6e-27; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 15156116 - 15156051
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15156116 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccctcacttatatt 15156051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 34313995 - 34313930
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34313995 tgttcaattgcacttttgtcccttatctttttgctaattgtacgattttgcaccctcacttatatt 34313930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 43162468 - 43162403
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43162468 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcatcctcacttatatt 43162403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 12281247 - 12281312
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  12281247 tgttcaattgcacttttgccccttatctttttgctaactgtgcgattttgcaccctcacttatatt 12281312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 15155882 - 15155940
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15155882 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 15155940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 765857 - 765922
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  765857 tgttcaattgcacttttgccccttatctttttgctaaccgtgcgattttgcaccctcacttatatt 765922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 37752470 - 37752413
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37752470 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 37752413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 41662334 - 41662269
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||    
T  41662334 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttacaccttcacttatatt 41662269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43246236 - 43246173
Alignment:
Q  1 aaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  43246236 aaacaaggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccctc 43246173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 12281480 - 12281423
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  12281480 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 12281423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 15156239 - 15156182
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcaccccctc 15156182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 37752237 - 37752290
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37752237 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 37752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 16928941 - 16928999
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  16928941 aggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcaccccctc 16928999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 34313765 - 34313820
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  34313765 ggcttaattgcacttttcccct--atcttttgttaattgtgcgattttgcaccccctc 34313820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 16929296 - 16929239
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccctc 16929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 41662457 - 41662400
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 41662400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 43245871 - 43245928
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  43245871 ggcttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctc 43245928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 43245994 - 43246047
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  43245994 tgttcaattacacttttgccccttatctttttgctaattgtgcgattttgcacc 43246047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 9465695 - 9465755
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcactt 190  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| |||||    
T  9465695 tgttcaattgcacttttgccccctatctttttgctaactgtgcgattttgcacccccactt 9465755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9823421 - 9823361
Alignment:
Q  1 aaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  9823421 aaacaaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 9823361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 18020142 - 18020085
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  18020142 aaggcttaattgcacttttaccct--atcttttgttaattgtgcgattttgcaccccctc 18020085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 765736 - 765791
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 765791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 12281122 - 12281181
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| ||||    
T  12281122 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctc 12281181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 41662105 - 41662164
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||    
T  41662105 aaggcttaattgcacattttccccatatcttttgttaattgtgcgattttgcaccccctc 41662164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 18019910 - 18019964
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  18019910 tgttcaattgcacttttgccccctatctttttcctaattgtgcgattttgcaccc 18019964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 22851390 - 22851444
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 22851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 37752084 - 37752138
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcacccc 37752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 43162234 - 43162290
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  43162234 ggcttaattgcacttttcccc-ctatattttgttaattgtgcgattttgcacctcctc 43162290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 13937444 - 13937389
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| |||| |||||| |||||||||| ||||||||||    
T  13937444 aggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcacccc 13937389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 9822748 - 9822802
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| || ||||||||| | |||||||||||||||||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcacccc 9822802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 23123338 - 23123392
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||    
T  23123338 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacacccc 23123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 39724102 - 39724048
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 39724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 3463999 - 3463946
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||| ||||||||    
T  3463999 ggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccc 3463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 13026634 - 13026687
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    ||||||||||||||||||| || ||||||||||  |||||||||||||||||||    
T  13026634 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 13026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 43162588 - 43162536
Alignment:
Q  11 taattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  43162588 taattgcacttttcccc-ctatcttttgtcaatcgtgcgattttgcaccccctc 43162536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 74688 - 74739
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| || |||||||| ||||||||||||||||||||||    
T  74688 cttaattgcacttttccc-tccatcttttgctaattgtgcgattttgcacccc 74739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 74916 - 74864
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcac 182  Q
    |||| ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  74916 tgtttaattgcacttttgtcccctatctttttgtcaattgtgcgattttgcac 74864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 13936721 - 13936776
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| |||||||||   |||||||||||||||||||||    
T  13936721 aaggcttaattgcacttttcccc-ctatcttttaccaattgtgcgattttgcacccc 13936776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 16929067 - 16929115
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  16929067 aattgcacttttgccccttatctttttgttaattgtgagattttgcacc 16929115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 9465906 - 9465871
Alignment:
Q  29 ctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  9465906 ctatcttttgttaattgtgcgattttgcaccccctc 9465871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 13027332 - 13027281
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 13027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 23123567 - 23123514
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  23123567 cttaattgcacttt-cccct-tatcttttgctaattgtgcgattttgcaccccctc 23123514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 34498610 - 34498555
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  34498610 aggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcacccc 34498555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37670314 - 37670253
Alignment:
Q  1 aaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||| |||||||||||||||| || |||||||| ||||||||||| |||||||||||||||    
T  37670314 aaacaagtcttaattgcacttttctcc-ctatcttt-gttaattgtgcaattttgcaccccctc 37670253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 3307338 - 3307388
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    |||||||||||| ||||| || ||||||||||| |||||||||||||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgca 3307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 7127882 - 7127828
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||  ||| ||||||||||||||||| | ||||||||||||    
T  7127882 tgttcaattgcacttttaccccctatctttttgctaattgcgtgattttgcaccc 7127828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 767760 - 767720
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtg 47  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  767760 aggcttaattgcacttttcccc-ctatcttttgttaattgtg 767720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 7127660 - 7127708
Alignment:
Q  14 ttgcacttttcccctctatcttttgttaattgtgcgattttgcaccccct 63  Q
    |||||||||||||| |||||||||| |||||||||||||||||| |||||    
T  7127660 ttgcacttttcccc-ctatcttttgctaattgtgcgattttgcatcccct 7127708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 9930885 - 9930837
Alignment:
Q  14 ttgcacttttcccctctatcttttgttaattgtgcgattttgcaccccct 63  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  9930885 ttgcactttccccct-tatcttttgttaattgtgcgattttgcactccct 9930837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 16929291 - 16929243
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  16929291 aattgcacttttctcccctatctttt-gctaattgtgcgattttgcaccc 16929243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 33748217 - 33748161
Alignment:
Q  130 tgttcaattgcacttttgtcccttatcttttt--gctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||| ||| ||| |||||  |||||||||||||||||||||||    
T  33748217 tgttcaattgcacttttgccccctatttttttttgctaattgtgcgattttgcaccc 33748161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 75017 - 74981
Alignment:
Q  28 tctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||| |||||||||||||||||||||||||    
T  75017 tctatcttttgctaattgtgcgattttgcaccccctc 74981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 6092775 - 6092825
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||||||||    
T  6092775 aaggcttaattgca-ttttcccc-ctatcttttgtcaattgtgcgattttgca 6092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 22786933 - 22786989
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctc 186  Q
    |||| ||||||||||||| ||||||||| ||||  | ||||||||||||||||||||    
T  22786933 tgtttaattgcacttttgccccttatctatttgtcagttgtgcgattttgcaccctc 22786989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 25438794 - 25438846
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25438846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 3463641 - 3463694
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||| || |||||||| |||||||||||||||||||| ||||||||||||    
T  3463641 aggcttaattaca-ttttcccc-ctatcttttgttaattgtgcaattttgcacccc 3463694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 34498125 - 34498176
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 34498176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 37396707 - 37396762
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||   ||||||||||||||||||||    
T  37396707 aggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcacccc 37396762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 17431285 - 17431339
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||||||||||||||  |||  ||||| |||||||||||||| ||||    
T  17431285 aaggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacc 17431339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 37397199 - 37397145
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||| ||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 37397145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 37669958 - 37670004
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgc 56  Q
    |||||||||||||||| |  ||||||||||||||||||| |||||||    
T  37669958 ttaattgcacttttcctccttatcttttgttaattgtgcaattttgc 37670004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 37670186 - 37670132
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||| ||||||| |||||| || ||| ||||||||||||||| ||||||||||||    
T  37670186 tgtttaattgcatttttgtaccatatttttttgctaattgtgtgattttgcaccc 37670132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 41662519 - 41662573
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||||||||||||||  |||  ||||  |||||||||||||||||||    
T  41662519 aaggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 41662573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 9465605 - 9465653
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 54  Q
    ||||||||||||||||||||| | ||||||||||| |||||||| |||||    
T  9465605 aaggcttaattgcacttttcctc-ctatcttttgtcaattgtgcaatttt 9465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 11007654 - 11007707
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||| |||||||||||||  || ||||||||||| |||||||||||||| ||||    
T  11007654 tgtttaattgcacttttgctccctatctttttgccaattgtgcgattttacacc 11007707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 12281475 - 12281427
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  |||||||||||| | |||||||||||||||||||||    
T  12281475 aattgcacttttcccccttatctttt-gttaattgtgcgattttgcaccc 12281427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 18019915 - 18019968
Alignment:
Q  12 aattgcacttttcccctctatcttttgt-taattgtgcgattttgcaccccctc 64  Q
    |||||||||||| ||| |||||||||   |||||||||||||||||||||||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcaccccctc 18019968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 22786843 - 22786892
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||||| ||| |||||||||  |||||||| |||||||||||    
T  22786843 ttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20861698 - 20861638
Alignment:
Q  1 aaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| |||| ||| ||||  | ||  |||||||||||||||||||||    
T  20861698 aaacaaggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcacccc 20861638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 24473824 - 24473768
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||  | ||||  ||||  |||||||||||||||||||||    
T  24473824 aaggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcacccc 24473768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 25439181 - 25439126
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||| |||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  25439181 aaggtttaattgcactttttccc-ctatagtttgtcaattgtgcgattttgcacccc 25439126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 43597913 - 43597957
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcga 174  Q
    ||||||||||  |||||| ||| ||||||||||||||||||||||    
T  43597913 tgttcaattgtgcttttgccccctatctttttgctaattgtgcga 43597957  T

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Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 186
Target Start/End: Complemental strand, 43598782 - 43598754
Alignment:
Q  158 ttttgctaattgtgcgattttgcaccctc 186  Q
    |||||||||||||||||||||||||||||    
T  43598782 ttttgctaattgtgcgattttgcaccctc 43598754  T

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Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 3930407 - 3930346
Alignment:
Q  134 caattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3930407 caattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 3930346  T

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Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 13198727 - 13198792
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13198727 tgttcaattgcacttttgtcccttatcttttttctaattgtgcgattttgcaccctcacttatatt 13198792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 22681702 - 22681767
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22681702 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacattcacttatatt 22681767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 11241621 - 11241558
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttata 193  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11241621 tgttcaatttcacttttgccccttatctttttgctaattgtgcgattttgcaccctcacttata 11241558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 13198962 - 13198903
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13198962 aaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 13198903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 16555514 - 16555572
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  16555514 aggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 16555572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 3930534 - 3930477
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  3930534 aggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcaccccctc 3930477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 16555748 - 16555695
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  16555748 tgttcaattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9023740 - 9023680
Alignment:
Q  1 aaacaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  9023740 aaacaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 9023680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 24775839 - 24775783
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  24775839 aaggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcacccc 24775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 18077258 - 18077199
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||| || |||| ||||| |||||||||||||||||||||||||    
T  18077258 aaggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccctc 18077199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 56505692 - 56505747
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  56505692 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 56505747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 16555871 - 16555817
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcacccc 16555817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 49178639 - 49178693
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  49178639 tgttcaattgcacttttgccccctatctttttgccaattgtgcgattttgcaccc 49178693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 11241389 - 11241446
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||||||| ||||||    
T  11241389 ggcttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatcccctc 11241446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 22681934 - 22681881
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  22681934 aggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 27304947 - 27304894
Alignment:
Q  131 gttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  27304947 gttcaattgcactttttccccctatctttttgctaattgtgcgattttgcaccc 27304894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 8488307 - 8488363
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctc 186  Q
    |||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||    
T  8488307 tgttcaattgcacttttgccccctatgtttttgctaattgtgcaattttgcaccctc 8488363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 22681576 - 22681631
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  22681576 gcttaattgcactttccccc-ctatcttttgtcaattgtgcgattttgcaccccctc 22681631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 35393599 - 35393651
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcac 182  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  35393599 tgttcaattgaacttttgccccctatctttttgctaattgtgcgattttgcac 35393651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 5205987 - 5206042
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||| | ||||||||||||||||  |||||||||||||||    
T  5205987 aggcttaattgcacttttcctccctatcttttgttaatttggcgattttgcacccc 5206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 35393831 - 35393773
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||| || |||||||||| ||||||||||| |||||||||||||    
T  35393831 aaggcttaattgcacttttcacc-ctatcttttgctaattgtgcgaatttgcaccccctc 35393773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 39744520 - 39744465
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  39744520 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 39744465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 50678778 - 50678833
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  50678778 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 50678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 13198606 - 13198660
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctc 13198660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 3930179 - 3930235
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||| ||| ||||||||| |||||| |||||||||||||||||||    
T  3930179 ggcttaattgcactttttccc-ctatcttttattaattatgcgattttgcaccccctc 3930235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 5206283 - 5206231
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  5206283 ggcttaattgcacttttcccccttatctttt-ttaattgtgcgattttgcaccc 5206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 7603146 - 7603200
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||  ||||||| |||||||||| |||||||||||||||    
T  7603146 gcttaattgcacttttcccct--atctttttttaattgtgcaattttgcaccccctc 7603200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 28196830 - 28196773
Alignment:
Q  4 caaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  28196830 caaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 28196773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 47219252 - 47219203
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  47219252 ttaattgcatttttcacctctatcttttgctaattgtgcgattttgcacc 47219203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 49178866 - 49178813
Alignment:
Q  11 taattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||| || ||||||||||  ||||||||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccctc 49178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 293273 - 293217
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  293273 aaggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 293217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 5206190 - 5206138
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcac 182  Q
    ||||||||||||||| |  ||| ||||||||||||||||||||||||||||||    
T  5206190 tgttcaattgcacttcttccccctatctttttgctaattgtgcgattttgcac 5206138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 8488534 - 8488479
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||||    
T  8488534 gcttaattgcacttttcgcct-tatctttttctaattgtgcgattttgcaccccctc 8488479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 36095815 - 36095871
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| ||||| || ||||||||||  |||||||||||||||||||||    
T  36095815 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 36095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 39415580 - 39415528
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||    
T  39415580 aaggcttaactgcactttttccctctatcttttgctaattgtgcaattttgca 39415528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 28196345 - 28196400
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  28196345 aggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcacccc 28196400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 36096526 - 36096475
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 36096475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 45830251 - 45830196
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||| ||||||||| || ||||||||||| |||||||||||||| ||||||    
T  45830251 aggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacacccc 45830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 169493 - 169439
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||| |||||||| ||||  ||||| |||||||||||||||||||||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacccc 169439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 8182229 - 8182171
Alignment:
Q  5 aaggcttaattgcacttttcccctctatctttt-gttaattgtgcgattttgcaccccc 62  Q
    |||||||||||||||||||| || |||| |||| | |||||||||||||||||||||||    
T  8182229 aaggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcaccccc 8182171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 27304718 - 27304773
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||| ||||||||||  ||||| || |||||||||||||||||||||||||    
T  27304718 ggcttaattgcccttttcccct--atcttctgctaattgtgcgattttgcaccccctc 27304773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 32703704 - 32703650
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 50679478 - 50679424
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| || ||||||||||  |||||| ||||||||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcacccc 50679424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 8181992 - 8182049
Alignment:
Q  8 gcttaattgcacttttcccctctatc-ttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||| ||| ||||| |||||  ||||||||||||||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccccctc 8182049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 8181996 - 8182045
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||| ||| |||| |||||| ||||||||||||||||||||    
T  8181996 aattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccc 8182045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 8182222 - 8182173
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  8182222 aattgcacttttcacccctatttttttgctaattgtgcgattttgcaccc 8182173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 16555866 - 16555818
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  16555866 aattgcacttttcccccttatctttt-gctaattgtgcgattttgcaccc 16555818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 23540306 - 23540253
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||||||||| || ||||  ||||| ||||||||||||||||||||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccc 23540253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 25161879 - 25161932
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25161932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 27304943 - 27304890
Alignment:
Q  12 aattgcacttttcccctctatctttt-gttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||| ||| ||||||||| | |||||||||||||||||||||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcaccccctc 27304890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 8488186 - 8488242
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| ||||   |  ||||||||||||||||||||||||||||||||    
T  8488186 aaggcttaattgcattttttttccatatcttttgttaattgtgcgattttgcacccc 8488242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 9380796 - 9380744
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcac 58  Q
    |||||||||||||||||||||| ||||  ||||  ||||||||||||||||||    
T  9380796 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 9380744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 26207802 - 26207746
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| |||||||| ||||  ||||  |||||||||||||||||||||    
T  26207802 aaggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 26207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 32703223 - 32703279
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||  |||||||||||| ||||||||    
T  32703223 aaggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcacccc 32703279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 43051308 - 43051252
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| ||||| || ||||||||||  ||||||| |||||||||||||    
T  43051308 aaggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcacccc 43051252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 5206278 - 5206230
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccct 185  Q
    ||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  5206278 aattgcacttttcccccttatcttttt--taattgtgcgattttgcaccct 5206230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 9023243 - 9023298
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| || ||||  ||||  |||||||||||||||||||||    
T  9023243 aggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcacccc 9023298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 11241715 - 11241661
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||| |||||||||| ||||||||||  ||||||| |||||||||||||    
T  11241715 aggcttaattgtacttttcccc-ctatcttttgccaattgtgggattttgcacccc 11241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 4239420 - 4239366
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||| ||| ||||  ||||  |||||||||||||||||||||    
T  4239420 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 4239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 9380307 - 9380361
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||| ||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 9380361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 13198603 - 13198656
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||| |||||||||||| ||| ||||||||| || ||||||||||||||||||||    
T  13198603 tgtttaattgcacttttctcctttatctttt-gccaattgtgcgattttgcaccc 13198656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 169011 - 169068
Alignment:
Q  5 aaggcttaattgcacttttc-ccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||| ||| ||||  ||||  |||||||||||||||||||||    
T  169011 aaggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcacccc 169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 11529169 - 11529222
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| | ||| ||||||  ||||||| |||||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcacccc 11529222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 16555520 - 16555568
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  |||||||||||| | |||||||||||||||||||||    
T  16555520 aattgcacttttcccccttatctttt-gttaattgtgcgattttgcaccc 16555568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 18077251 - 18077203
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  18077251 aattgcacttttcacccctat-tttttgctaattgtgcgattttgcaccc 18077203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 39912052 - 39912101
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 54  Q
    ||||||||||||||||||||| | ||||  ||| ||||||||||||||||    
T  39912052 aaggcttaattgcacttttcctccctatagtttattaattgtgcgatttt 39912101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 43292038 - 43292091
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||  || ||||  ||||| |||||||||||||||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcacccc 43292091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 49178865 - 49178817
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  49178865 aattgcacttttctcccctatctttt-gccaattgtgcgattttgcaccc 49178817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 186
Target Start/End: Complemental strand, 54509143 - 54509114
Alignment:
Q  157 tttttgctaattgtgcgattttgcaccctc 186  Q
    ||||||||||||||||||||||||||||||    
T  54509143 tttttgctaattgtgcgattttgcaccctc 54509114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 16555743 - 16555695
Alignment:
Q  12 aattgcacttttcccctctatctttt-gttaattgtgcgattttgcacc 59  Q
    ||||||||||||||||  |||||||| | ||||||||||||||||||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26207359 - 26207414
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| |||| ||||  ||||  |||||||||||||||||||||    
T  26207359 aaggcttaattgcactttccccc-ctatagtttgccaattgtgcgattttgcacccc 26207414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 186
Target Start/End: Original strand, 39415251 - 39415279
Alignment:
Q  158 ttttgctaattgtgcgattttgcaccctc 186  Q
    |||||||||||||||||||||||||||||    
T  39415251 ttttgctaattgtgcgattttgcaccctc 39415279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 43050605 - 43050661
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||| |||||||||||||||  | |||||||||   |||||||||||||||||||||    
T  43050605 aaggtttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 43050661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 6e-27; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 17518535 - 17518470
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17518535 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccctcacttatatt 17518470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 47955429 - 47955494
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47955429 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcaattatatt 47955494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 8108953 - 8108888
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||    
T  8108953 tgttcaattgcacttttgccccatatctttttgctaattgtgcgattttacaccctcacttatatt 8108888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 41083031 - 41083096
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  41083031 tgttcaattgtacttttgccccttatctttttactaattgtgcgattttgcaccctcacttatatt 41083096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 47955663 - 47955605
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  47955663 aggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 47955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 13589714 - 13589656
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  13589714 aaggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcaccccctc 13589656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 47955304 - 47955363
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  47955304 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 47955363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 17518302 - 17518359
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  17518302 aggcttaattgcacctttcccct-tatcttttgttaattgtgcgattttgcaccccctc 17518359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 31848247 - 31848189
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  31848247 aggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctc 31848189  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 41083265 - 41083208
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  41083265 aggcttaattgcacttttcccc-ctatcttttgttagttgtgcgattttgcaccccctc 41083208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 8108724 - 8108777
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccct 63  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  8108724 ttaattgcacttttcctccctatcttttgttaattgtgcgattttgcaccccct 8108777  T

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Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 22149633 - 22149580
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22149633 tgtttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 8109049 - 8108993
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  8109049 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 8108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 39692056 - 39692000
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  39692056 aaggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcacccc 39692000  T

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Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 22149755 - 22149701
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||| |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  22149755 aaggtttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 49284407 - 49284463
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  49284407 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 49284463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 17518653 - 17518599
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  17518653 cttaattgcacttttcccc-ctatcttttgccaattgtgcgattttgcaccccctc 17518599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 22149401 - 22149458
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  22149401 aaggcttaattgcacttttcccc-ctatctttggt-aattgtgcgattttgcaccccctc 22149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 1176839 - 1176893
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcaccccctc 1176893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 6002237 - 6002291
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| || ||||||||||| ||||||| |||||||||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcacccc 6002291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 48190771 - 48190825
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 48190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 20480166 - 20480221
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  20480166 aaggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcacccc 20480221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 26815174 - 26815119
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||| | |||||||||||||||||||||    
T  26815174 aggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcacccc 26815119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 28634208 - 28634157
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 28634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 32163098 - 32163043
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  32163098 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32163043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 44911024 - 44911079
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||| |||| |||| |||||  |||||||||||||||||||||    
T  44911024 aggcttaattgcactttccccccctatattttgccaattgtgcgattttgcacccc 44911079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 48191410 - 48191355
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| || ||||||||||  ||| |||||||||||||||||    
T  48191410 aggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcacccc 48191355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 50615238 - 50615289
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgc 56  Q
    ||||||||||||||||||||||| ||||  ||||| ||||||||||||||||    
T  50615238 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 50623066 - 50623117
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgc 56  Q
    ||||||||||||||||||||||| ||||  ||||| ||||||||||||||||    
T  50623066 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 9347126 - 9347180
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9347180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 26814694 - 26814748
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| | ||||  ||||| |||||||||||||||||||||    
T  26814694 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 26814748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 50429654 - 50429708
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||| ||||||||||| |||  |||| ||||||||||||||||||||    
T  50429654 aaggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacc 50429708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 50615674 - 50615621
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  50615674 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcacccc 50615621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 50623502 - 50623449
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  50623502 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcacccc 50623449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 1177069 - 1177016
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccct 63  Q
    |||||||||||||||| | |||||||| | ||||||||| ||||||||||||||    
T  1177069 ttaattgcacttttcctccctatctttcgctaattgtgcaattttgcaccccct 1177016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 41082909 - 41082966
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||| |||||| ||| ||||||||||  ||||||||||||||||| ||||||    
T  41082909 ggcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctc 41082966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 48104676 - 48104732
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||| |||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  48104676 aaggtttaattgcacttttcccccctatagtttggcaattgtgcgattttgcacccc 48104732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 48313848 - 48313792
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||| |||||| |||  ||||||||| ||||||||| ||||||||||||    
T  48313848 aaggcttaattgtactttttcccattatcttttgctaattgtgcaattttgcacccc 48313792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 19008805 - 19008750
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  |||   |||||||||||||||||||||    
T  19008805 aggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcacccc 19008750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 20371406 - 20371352
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccc 62  Q
    ||||||||||||||||||||| ||||  ||||  ||||||||||||||||||||||    
T  20371406 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccc 20371352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 31848016 - 31848067
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgca 181  Q
    |||| ||||||||||||| ||  ||||||||||| |||||||||||||||||    
T  31848016 tgtttaattgcacttttgccctctatctttttgccaattgtgcgattttgca 31848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 50430132 - 50430081
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 50430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 1176717 - 1176766
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    |||||||||||||||| |||| |||| ||||| ||||||||||||||||||    
T  1176717 ggcttaattgcactttccccc-ctatattttgctaattgtgcgattttgca 1176766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 4692491 - 4692433
Alignment:
Q  3 acaaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||| ||||  ||||  |||||||| ||||||||||||    
T  4692491 acaaggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcacccc 4692433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 21687025 - 21687079
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||| |||||||  ||||||||||||    
T  21687025 ggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcacccc 21687079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 27172116 - 27172169
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  27172116 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcacccc 27172169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 48105170 - 48105116
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||  |||  ||||  |||||||||||||||||||||    
T  48105170 ggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacccc 48105116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 20480665 - 20480613
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||||||||||||||| ||||  ||||  ||||||||||||||||||||    
T  20480665 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccc 20480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 42611665 - 42611616
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    ||||||||||||||| || ||||  ||||| |||||||||||||||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacc 42611616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 47498547 - 47498495
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||| ||||  ||||| ||||||||| |||||||||||    
T  47498547 gcttaattgcacttttcccc-ctatagtttgtcaattgtgcggttttgcacccc 47498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 999110 - 999161
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    |||| |||||||||||||||||| ||||  ||||| |||||||||||||||||    
T  999110 aaggtttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgca 999161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 6002946 - 6002894
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||  | |||||||||   |||||||||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcacccc 6002894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 22149748 - 22149701
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    ||||||||||||  ||| |||||||| ||||||||||||||||||||||    
T  22149748 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 27172597 - 27172545
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    ||||||||||||||||||||||| || |  ||||  |||||||||||||||||    
T  27172597 aaggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgca 27172545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 31847893 - 31847945
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    |||| ||||||||||||| ||||  ||||||||| ||||||||| ||||||||    
T  31847893 aaggtttaattgcactttacccccttatcttttgctaattgtgcaattttgca 31847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 31848019 - 31848067
Alignment:
Q  10 ttaattgcacttttcccctctatc-ttttgttaattgtgcgattttgca 57  Q
    |||||||||||||| ||||||||| |||||  |||||||||||||||||    
T  31848019 ttaattgcacttttgccctctatctttttgccaattgtgcgattttgca 31848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 33085669 - 33085725
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||| |||||||| | |||| |||||| ||||||  |||||||||||||    
T  33085669 aaggcttaattgtacttttccaccctatattttgtcaattgtttgattttgcacccc 33085725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 46056904 - 46056953
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    ||||||||||||||| |||||  |||||||| ||||| ||||||||||||||    
T  46056904 gcttaattgcactttccccct--atcttttgctaattttgcgattttgcacc 46056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 46057016 - 46057068
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcac 182  Q
    |||| ||||||| ||||| ||| ||| ||||||| ||||||||||||||||||    
T  46057016 tgtttaattgcaattttgccccctatttttttgccaattgtgcgattttgcac 46057068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 46823846 - 46823894
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcac 58  Q
    |||||||||||||||||| ||||  ||||  ||||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 46823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 50526524 - 50526472
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||| ||| ||||  ||||  |||||||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 50526472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 1e-24; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 3687588 - 3687523
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  3687588 tgttcaattgcacttttgtcccttatttttttgctaattgtgcgattttacaccctcacttatatt 3687523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 9412256 - 9412191
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  9412256 tgttcaattgcacttttgccccttatctttttgctaactgtgcgattttgcaccctcacttatatt 9412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 9412021 - 9412080
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  9412021 aaggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 9412080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 3687353 - 3687411
Alignment:
Q  7 ggcttaattgcacttttcccctc-tatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  3687353 ggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccctc 3687411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 9412380 - 9412322
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  9412380 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 9412322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 3687710 - 3687653
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 3687653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 13772846 - 13772793
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  13772846 tgttcaattacacttttgccccttatctttttgctaattgtgcgattttgcacc 13772793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 13772955 - 13772898
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  13772955 ggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcaccccctc 13772898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 8953941 - 8953886
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  8953941 gcttaattgcacttttcccc-ctatcttttgttaattgtgcaattttgcaccccctc 8953886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 6908212 - 6908265
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  6908212 aggcttaattgcacttttcccc-ctatctattgttaattgtgcgattttgcaccc 6908265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 3205149 - 3205093
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  3205149 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 3205093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 17156965 - 17157021
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  17156965 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 17157021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 20419380 - 20419324
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  20419380 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 20419324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 22740154 - 22740210
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  22740154 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 22740210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 44600191 - 44600135
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  44600191 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 13772640 - 13772695
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||| | |||||||||| |||||||| |||||||||||||    
T  13772640 aggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcacccc 13772695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 33628715 - 33628660
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||| |||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  33628715 aggctaaattgcactttttccctctatcttttactaattgtgcgattttgcacccc 33628660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 6908445 - 6908391
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||| |||||  ||| ||||||||||||||||||||||||||||||||    
T  6908445 tgttcaattgcgcttttaccccctatctttttgctaattgtgcgattttgcaccc 6908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 44599489 - 44599543
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  44599489 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44599543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 23686772 - 23686723
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 55  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  23686772 aggcttaattgcactttttccccctatcttttgctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 29292095 - 29292038
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||  |||||| |||||| ||||||||||||||| |||||||||    
T  29292095 ggcttaattgcacttttttcctctaacttttgctaattgtgcgattttccaccccctc 29292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 34236030 - 34235977
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccc 62  Q
    |||||||| | ||||||| ||||||||||| |||||||||||||||||||||||    
T  34236030 cttaattgtatttttcccttctatcttttgctaattgtgcgattttgcaccccc 34235977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 5349784 - 5349733
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||| |||   ||||||||||||||||||||||||||||||||    
T  5349784 ggcttaattgcactttcccc---tatcttttgttaattgtgcgattttgcacccc 5349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 13744288 - 13744233
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  13744288 aaggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcacccc 13744233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 37972452 - 37972396
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  37972452 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 10533033 - 10533088
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  10533033 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 10533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 13863312 - 13863367
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||| ||||| || ||||||||||  |||||||||||||||||||||    
T  13863312 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 13863367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 18863970 - 18864021
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 18864021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 29291808 - 29291863
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||| | | |||||||||| ||||| |||||||||||||||||||    
T  29291808 cttaattgcactttttctccctatcttttgataattatgcgattttgcaccccctc 29291863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 37889314 - 37889259
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  37889314 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 5735253 - 5735303
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcac 58  Q
    ||||||||||||||||| || |||||||| | |||||||||||||||||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttgcac 5735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 9035347 - 9035293
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 18925373 - 18925322
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||    
T  18925373 gcttaattgcacttttcc--tctatattttgctaattgtgcgattttgcacccc 18925322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 27096392 - 27096339
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||||| ||||||    
T  27096392 ttaattgcacttttcccc-ctatcttttgtcaattgtgtgattttgcatcccctc 27096339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 27181911 - 27181964
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||||| ||||||    
T  27181911 ttaattgcacttttcccc-ctatcttttgtcaattgtgtgattttgcatcccctc 27181964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 37888833 - 37888887
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37888887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 38826969 - 38826915
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||||| |||||||| ||||  ||||| |||||||||||||||||||    
T  38826969 aaggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacc 38826915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 39983700 - 39983754
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccc 62  Q
    ||||||||||||||||||||  |||||||| |||||| |||||||| ||||||||    
T  39983700 gcttaattgcacttttcccccttatcttttattaattatgcgatttcgcaccccc 39983754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 48359320 - 48359373
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  48359320 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcacccc 48359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 5735598 - 5735553
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttg 55  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||||    
T  5735598 ttaattgcactttttccccctatcttttattaattgtgcgattttg 5735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 18925279 - 18925230
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||| ||||||| ||| ||||||||||| ||||||||||||||||||||    
T  18925279 aattgaacttttgccccctatctttttgccaattgtgcgattttgcaccc 18925230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 23686421 - 23686473
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||||||||||||||| |||||||||| ||||||| | |||||||||||    
T  23686421 ggcttaattgcacttttcccc-ctatcttttgctaattgtacaattttgcaccc 23686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 33628501 - 33628554
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    ||||||||||||| ||||  || |||||||||||||||||||| ||||||||||    
T  33628501 tgttcaattgcacatttgcaccctatctttttgctaattgtgcaattttgcacc 33628554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 35079960 - 35080012
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||||||||||||||| |||||||||| |||||||| | ||||||||||    
T  35079960 ggcttaattgcacttttcccc-ctatcttttgctaattgtggggttttgcaccc 35080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 35080263 - 35080223
Alignment:
Q  20 ttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  35080263 ttttcccct-tatcttttgttaattgtgcgattttgcacccc 35080223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 38191619 - 38191566
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||| ||||  || |||||||||||||||| |||||||||||||||    
T  38191619 ggcttaattgcattttttacccctatcttttgttaattatgcgattttgcaccc 38191566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 9034866 - 9034922
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccc 62  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||| |||||||||    
T  9034866 aggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcaccccc 9034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 13864012 - 13863964
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattt 53  Q
    |||||||||||||||||||| || ||||||||||  |||||||||||||    
T  13864012 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattt 13863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 15567220 - 15567164
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctc 186  Q
    ||||||||||||| |||| ||| | ||||||||||||||||| ||||||||| ||||    
T  15567220 tgttcaattgcacgtttgccccctctctttttgctaattgtgtgattttgcatcctc 15567164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 18925062 - 18925114
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    ||||||||||||||||||  | |||||||||| ||||||||| ||||||||||    
T  18925062 ggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 29292920 - 29292972
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    ||||||||||||||||||||||| ||||  ||||  |||||||||||||||||    
T  29292920 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 29292972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 38191260 - 38191312
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    |||| |||||||||||||||| || ||||||||| ||||| ||||||||||||    
T  38191260 aaggtttaattgcacttttcctctttatcttttgctaattatgcgattttgca 38191312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 38191388 - 38191435
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  38191388 aattgcactttt-tcccctatctttttgccaattgtgcgattttgcacc 38191435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 8643821 - 8643766
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||  | |||||||||   |||||||||||||||||||||    
T  8643821 aggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 8643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 20418891 - 20418942
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 20418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 22740641 - 22740591
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  22740641 ttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcacccc 22740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 33628397 - 33628451
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||| ||| ||||||||| ||||||||| |||||||| ||||||    
T  33628397 cttaattgcacttttctcct-tatcttttgctaattgtgcaattttgcatcccctc 33628451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 42418588 - 42418639
Alignment:
Q  4 caaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 55  Q
    |||||||||||| ||||||||||| ||||  |||| ||||||||||||||||    
T  42418588 caaggcttaatttcacttttcccccctatagtttgctaattgtgcgattttg 42418639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 46816366 - 46816311
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| ||| |||||||||   |||| ||||||||||||||||    
T  46816366 aggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcacccc 46816311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 5349489 - 5349519
Alignment:
Q  33 cttttgttaattgtgcgattttgcaccccct 63  Q
    |||||||||||||||||||||||||||||||    
T  5349489 cttttgttaattgtgcgattttgcaccccct 5349519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 5349691 - 5349641
Alignment:
Q  132 ttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcac 182  Q
    |||||||||||||||| ||| |||||||||||  ||||||| |||||||||    
T  5349691 ttcaattgcacttttgccccctatctttttgcatattgtgcaattttgcac 5349641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||||||| |||| |||| ||||| |||||||||||||||||||||    
T  6908534 ttaattgcactttccccc-ctattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 8953721 - 8953775
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||| ||||||||||||||||| |||||||||   || |||||||||||||||||    
T  8953721 tgtttaattgcacttttgtcccctatctttttagcaaatgtgcgattttgcaccc 8953775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 27096170 - 27096216
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgca 181  Q
    ||||||||||||| ||| ||||||||| | |||||||||||||||||    
T  27096170 aattgcacttttgccccctatctttttaccaattgtgcgattttgca 27096216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 27182133 - 27182087
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgca 181  Q
    ||||||||||||| ||| ||||||||| | |||||||||||||||||    
T  27182133 aattgcacttttgccccctatctttttaccaattgtgcgattttgca 27182087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 9412028 - 9412076
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  |||||||||||| | |||||||||||||||||||||    
T  9412028 aattgcacttttcccccttatctttt-gttaattgtgcgattttgcaccc 9412076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 5735398 - 5735430
Alignment:
Q  153 tatctttttgctaattgtgcgattttgcaccct 185  Q
    ||||||||||| |||||||||||||||||||||    
T  5735398 tatctttttgccaattgtgcgattttgcaccct 5735430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 15567017 - 15567045
Alignment:
Q  156 ctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||||||||||||||    
T  15567017 ctttttgctaattgtgcgattttgcaccc 15567045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 16199033 - 16198977
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| |||  |||  ||||  |||||||||||||||||||||    
T  16199033 aaggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcacccc 16198977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 27096047 - 27096094
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 55  Q
    |||||||||||||||| |||| |||| ||||| ||||||||||||||||    
T  27096047 ggcttaattgcactttccccc-ctatattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 27182256 - 27182209
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 55  Q
    |||||||||||||||| |||| |||| ||||| ||||||||||||||||    
T  27182256 ggcttaattgcactttccccc-ctatattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 30857960 - 30857904
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||  |   |||||||||| |||||||| ||||||||||||    
T  30857960 aaggcttaattgcacttttgtctcttatcttttgtcaattgtgcaattttgcacccc 30857904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 36527382 - 36527437
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||| |||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  36527382 aaggtttaattgcactttttccc-ctatagtttgtcaattgtgcgattttgcacccc 36527437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 1e-24; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 18242087 - 18242022
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  18242087 tgttcaattgcacttttgccccttatctttttgttaattgtgcgattttgcaccctcacttatatt 18242022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 18241852 - 18241911
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18241852 aaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 18241911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 3404044 - 3403986
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  3404044 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 3403986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 3403920 - 3403867
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3403920 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 30388295 - 30388242
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30388295 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 2762606 - 2762660
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  2762606 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 2762660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 3403717 - 3403771
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 10039898 - 10039844
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  10039898 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 10039844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 21032335 - 21032285
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgc 56  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21032335 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 21032285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 33972244 - 33972188
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctc 186  Q
    |||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  33972244 tgttcaattgcacttttgccccatatctttttgctaattgtgagattttgcaccctc 33972188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 10039675 - 10039729
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  10039675 aggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 10039729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 21031977 - 21032035
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  21031977 aaggcttaattgcacttttcccc-ctaacttttgctaattgtgcgattttgcaccccctc 21032035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 7654605 - 7654548
Alignment:
Q  4 caaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  7654605 caaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 7654548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 11656836 - 11656779
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||| |  |||||||||| |||||||||||||||||||||||||    
T  11656836 ggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcaccccctc 11656779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 12714436 - 12714488
Alignment:
Q  12 aattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttgcagcccctc 12714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 31598783 - 31598732
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  31598783 aaggtttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgca 31598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 33829691 - 33829636
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  33829691 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 3825530 - 3825583
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||||||||||    
T  3825530 ttaattgcacttttcccc-ctatattttgctaattgtgcgattttgcaccccctc 3825583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 11656603 - 11656657
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||| ||| |||| ||||| |||||||||||||||||||||    
T  11656603 tgttcaattgcacttttgccccctatcgttttgataattgtgcgattttgcaccc 11656657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 13579705 - 13579648
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||    
T  13579705 aggcttaattgcacttttctcc-ctatcgtttgctaattgtgcgattttgcaccccctc 13579648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 33828990 - 33829044
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  33828990 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 30388413 - 30388360
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccct 63  Q
    ||||||| |||||| ||| |||||||||| ||||||||||||||||||||||||    
T  30388413 ttaattgtactttttccccctatcttttgctaattgtgcgattttgcaccccct 30388360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 33655170 - 33655114
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccc 62  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||    
T  33655170 aaggcttaattgcacttgtcccct-tatcttttgctaattgtgcaattttgcaccccc 33655114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 33971994 - 33972050
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||| |||| ||| |||||||||||||||||| |||||||||||||||||    
T  33971994 ggcttaattgcagtttttccc-ctatcttttgttaattgtacgattttgcaccccctc 33972050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 2354866 - 2354810
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| ||||||| |||||  ||||| |||||||||||||||||||||    
T  2354866 aaggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcacccc 2354810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 23250590 - 23250648
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||| ||| ||||||||||||    
T  23250590 aaggcttaattgcactttttccc-ctatcttttgtcaattgtgagatcttgcaccccctc 23250648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 31598328 - 31598274
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||| | ||||||| ||||||||||| |||||||||||||||||||||    
T  31598328 aaggcttaattgtatttttccc-tctatcttttgctaattgtgcgattttgcaccc 31598274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 33658563 - 33658618
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccct 185  Q
    |||| ||||||||||||| || |||||||||||| |||||||| ||||||||||||    
T  33658563 tgtttaattgcacttttgccctttatctttttgccaattgtgcaattttgcaccct 33658618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 13579583 - 13579529
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||| ||| ||| |||||||||||||||| ||| |||||||    
T  13579583 tgttcaattgcacttttgccccctatatttttgctaattgtgcaattctgcaccc 13579529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 30388062 - 30388111
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  30388062 ggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgca 30388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 2762611 - 2762664
Alignment:
Q  12 aattgcacttttcccctctatctttt-gttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||| ||| ||||||||| | |||||||||||||||||||||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 2762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 10039893 - 10039840
Alignment:
Q  12 aattgcacttttcccctctatctttt-gttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||| ||| ||||||||| | |||||||||||||||||||||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 10039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 11656608 - 11656660
Alignment:
Q  12 aattgcacttttcccctctatc-ttttgttaattgtgcgattttgcaccccct 63  Q
    |||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||    
T  11656608 aattgcacttttgccccctatcgttttgataattgtgcgattttgcaccccct 11656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 21032107 - 21032158
Alignment:
Q  14 ttgcacttttcccctctatctt-ttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||| ||| ||||||| |||| ||||||||||||||||||||||||    
T  21032107 ttgcacttttgccccctatcttcttgtcaattgtgcgattttgcaccccctc 21032158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 22755142 - 22755091
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    ||||||||||||||||||||| |||  ||||| |||| ||||||||||||||    
T  22755142 gcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcacc 22755091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 2762829 - 2762782
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgatttt 54  Q
    ||||||||||||||||||||   |||||||||||||||||||| ||||||    
T  2762829 aaggcttaattgcacttttct--tctatcttttgttaattgtgtgatttt 2762782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 10087912 - 10087858
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| || |  ||||  |||||||||||||||||||||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcacccc 10087858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 33974353 - 33974299
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||| |||||||| ||||  ||||  |||||||||||||||||||||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 33974299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 3403722 - 3403770
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  3403722 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 3403770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 3404038 - 3403990
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  3404038 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 3403990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 11656831 - 11656783
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||| || | |||||||| |||||||||||||||||||||||    
T  11656831 aattgcacttttctctcctatctttt-gctaattgtgcgattttgcaccc 11656783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 18242082 - 18242033
Alignment:
Q  12 aattgcacttttcccctctatctttt-gttaattgtgcgattttgcaccc 60  Q
    |||||||||||| |||  |||||||| |||||||||||||||||||||||    
T  18242082 aattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 18242033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 18242210 - 18242153
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||| ||||   | ||||||||||  ||||||||||||||||||||||||    
T  18242210 ggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcaccccctc 18242153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 25115880 - 25115945
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25115880 tgttcaattgcacttttgccccttatcattttgctaattgtgcgattttgcaccctcacttatatt 25115945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 25174972 - 25175037
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25174972 tgttcaattgcacttttgccccttatcattttgctaattgtgcgattttgcaccctcacttatatt 25175037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 18433372 - 18433313
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18433372 aaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 18433313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 25175206 - 25175148
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25175206 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 25175148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 25116116 - 25116060
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccc 62  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25116116 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 25116060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 18433138 - 18433191
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18433138 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 26020573 - 26020625
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcac 182  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26020573 tgttcaattgcacttttgtcccttatctttttgttaattgtgcgattttgcac 26020625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 18433015 - 18433069
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 18433069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26020448 - 26020504
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  26020448 aaggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcacccc 26020504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 34576988 - 34577040
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcac 182  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34576988 tgtttaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 34577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 5779793 - 5779742
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgca 181  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  5779793 tgttcaattgcacttttgtctcctatctttttgctaattgtgcgattttgca 5779742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 5187645 - 5187699
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  5187645 tgttcaattgcacttttgtcccctatctttttgctaattatgcgattttgtaccc 5187699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 5187885 - 5187828
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccct 63  Q
    |||||||||||||||||| |||  ||||||||||||||||||| ||||||||||||||    
T  5187885 aggcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcaccccct 5187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 25115756 - 25115813
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccct 63  Q
    |||||||||||||||||||||| ||||||||||  ||||||| |||||||||||||||    
T  25115756 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccct 25115813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 25174848 - 25174905
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccct 63  Q
    |||||||||||||||||||||| ||||||||||  ||||||| |||||||||||||||    
T  25174848 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccct 25174905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 19515019 - 19514963
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  19515019 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 19514963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 16466797 - 16466746
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  16466797 aggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 22428933 - 22428987
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  22428933 aggcttaattgcactttccccc-ctatcttttgctaattgtgcgattttgcacccc 22428987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 22429250 - 22429196
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  22429250 aggcttaattgcatttttcccc-ctatcttttgctaattgtgcgattttgcacccc 22429196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 18817665 - 18817611
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18817611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 23011432 - 23011383
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  23011432 ttaattgcactttttccct-tatcttttgttaattgtgcgattttgcaccc 23011383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 33324893 - 33324835
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||  || ||||||||||| ||||||| ||||||||||||||||    
T  33324893 aggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcaccccctc 33324835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 41382896 - 41382945
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  41382896 ttaattgca-ttttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 23011079 - 23011131
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  23011079 ggcttaattgcatttttcccct-tatcttttgctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 31569910 - 31569958
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  31569910 ttaattgcacttttcccc-ctatcttttgtcaattgtgcgattttgcacc 31569958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 41383222 - 41383167
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||    
T  41383222 aaggcttaattgaacttttcccc-ctattttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 12498566 - 12498621
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  12498566 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 12498983 - 12498928
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  12498983 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 18816951 - 18817006
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||| ||||| || ||||||||||  |||||||||||||||||||||    
T  18816951 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 18817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 26570728 - 26570783
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||    
T  26570728 aggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcacccc 26570783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 26571219 - 26571164
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  26571219 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 26571164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 34147566 - 34147512
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    ||||||||||||||||||| ||| ||||  ||||| |||||||||||||||||||    
T  34147566 aaggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacc 34147512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 34577217 - 34577164
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||| ||| |||||||||| |||||||| |||||||||||||    
T  34577217 ggcttaattgcactttttccc-ctatcttttgctaattgtgtgattttgcacccc 34577164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 43464246 - 43464194
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||||||||||||| ||||  ||||| |||||||||||||||||||    
T  43464246 aggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcacc 43464194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 9665560 - 9665609
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||  |||||||| ||||||||| ||||||||||||    
T  9665560 ttaattgcacttttcccct--atcttttgctaattgtgcaattttgcacccc 9665609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 37780796 - 37780744
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||| |||||||||| ||||  |||| ||||||||||||||||||||    
T  37780796 ggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacc 37780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 11351478 - 11351427
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||| |  ||||||||||  |||||||||||||||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcacccc 11351427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 12441364 - 12441320
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattt 53  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||    
T  12441364 ggcttaattgcacttttccc--ctatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 16726084 - 16726135
Alignment:
Q  13 attgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||| ||| ||||||||||  ||||||||||||||||||| ||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacctcctc 16726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 21207229 - 21207280
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 21207280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 22729008 - 22729058
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcac 58  Q
    ||||||||||||||||||||| ||||  ||||| ||||||||||||||||||    
T  22729008 ggcttaattgcacttttcccc-ctatagtttgtaaattgtgcgattttgcac 22729058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 23011430 - 23011381
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctc 186  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  23011430 aattgcactttt-tcccttatctttt-gttaattgtgcgattttgcaccctc 23011381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 34576870 - 34576920
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||| ||||||    
T  34576870 ttaattgcactttccccc-ctatcttttgctaattgtgcgattttacacccc 34576920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 9869793 - 9869739
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||| ||||||||||||| ||| | ||||||| | ||||||||||||||||||||    
T  9869793 tgtttaattgcacttttgccccctgtctttttaccaattgtgcgattttgcaccc 9869739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 5187879 - 5187831
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||| |||||||| ||||| ||||||||| |||||||||||    
T  5187879 aattgcacttttgccccttatc-ttttgttaattgtgcaattttgcaccc 5187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 9665879 - 9665828
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||    
T  9665879 ggcttaattccacttttcccc-ctatcttttgctaattgtgc-attttgcaccc 9665828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 12441245 - 12441196
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttg 179  Q
    |||| ||||||||||||| ||| ||||||||||  |||||||||||||||    
T  12441245 tgtttaattgcacttttgccccctatctttttgtcaattgtgcgattttg 12441196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 18433020 - 18433068
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  18433020 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 18433068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 22729492 - 22729440
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  22729492 gcttaattgcacttttcccc-ctataatttgccaattgtgcgattttgcacccc 22729440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 25941067 - 25941018
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    |||||||||||||||||||  ||||  |||||||||| ||||||||||||    
T  25941067 gcttaattgcacttttccctcctatagtttgttaattatgcgattttgca 25941018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 9869558 - 9869611
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||| |||||||||||||||| | ||||  |||| |||||||||||||||||||||    
T  9869558 aaggtttaattgcacttttcctccctat--tttgctaattgtgcgattttgcaccc 9869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 11350806 - 11350861
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| ||||| || ||||||||||  |||||||| ||||||||||||    
T  11350806 aaggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcacccc 11350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 12441042 - 12441093
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||||||||  || ||||||||| |||||||||| ||||||||||    
T  12441042 ggcttaattgcacttttttcc-ctatcttttattaattgtgcaattttgcacc 12441093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 37610200 - 37610255
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||  ||||||| |||||||||||||    
T  37610200 aaggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcacccc 37610255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 37780318 - 37780373
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||  ||||||| |||||||||||||    
T  37780318 aaggcttaattgcacttttcccc-ctatagtttgccaattgtgtgattttgcacccc 37780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 43463754 - 43463809
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||| ||||||||||||||||||| |||  ||||  |||||||||||||||||||||    
T  43463754 aaggtttaattgcacttttcccct-tatagtttgccaattgtgcgattttgcacccc 43463809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-24; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 10293730 - 10293795
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  10293730 tgttcaattgcacttttgccccttatctttttgttaattgtgcgattttgcaccctcacttatatt 10293795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 20968951 - 20968886
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctcacttatatt 195  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  20968951 tgttcaattgcacttttgccccttatcattttgctaattgtgcgattttgcaccctcacttatatt 20968886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 10293963 - 10293906
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10293963 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 10293906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 20968716 - 20968775
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  20968716 aaggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctc 20968775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 17441119 - 17441066
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcac 58  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  17441119 aaggcttaattgcatttttcctctctatcttttgttaattgtgcgattttgcac 17441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 18875012 - 18875065
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  18875012 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 47871177 - 47871121
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccc 62  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  47871177 aaggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcaccccc 47871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 9026855 - 9026907
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcac 182  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  9026855 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcac 9026907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 13657676 - 13657622
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  13657676 tgtttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcaccc 13657622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 20969073 - 20969019
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 20969019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 18875245 - 18875188
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctc 18875188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 53687886 - 53687942
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  53687886 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 53687942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 40849016 - 40848961
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  40849016 aggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 40848961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 3644837 - 3644783
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||||||||    
T  3644837 ggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcacccc 3644783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 18874881 - 18874935
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||| |||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  18874881 aggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 45060926 - 45060872
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||| |||||    
T  45060926 aggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccc 45060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 4947263 - 4947312
Alignment:
Q  11 taattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||||| || |||| |||||||||||||||||||||||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccc 4947312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 8314013 - 8314066
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||||||||| || |||| |||||| ||||||||||||||||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcaccc 8314066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 10293608 - 10293665
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||| ||||  || ||||||||||| ||||||||||||||||||||||||    
T  10293608 ggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctc 10293665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 17372298 - 17372354
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccct 63  Q
    ||||||||||||| ||| ||| |||| ||||| ||||||||||||||||||||||||    
T  17372298 ggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccct 17372354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 45060596 - 45060644
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttg 55  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  45060596 ggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 27238951 - 27238900
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 27238900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 36181045 - 36180990
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||| | ||||  ||||||||||||||||||||| |||||    
T  36181045 aggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtacccc 36180990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 48159896 - 48159951
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  48159896 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 48159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 3353128 - 3353181
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  3353128 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcacccc 3353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 8315136 - 8315083
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  8315136 aggcttaattgcactttccccc-ctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 42455789 - 42455839
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgc 56  Q
    |||||||||||||||||||||| ||||  ||||| ||||||||||||||||    
T  42455789 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 42627599 - 42627550
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||||||    
T  42627599 ggcttaattgcacttttccc-tctatcttttgctaattgtgtgattttgca 42627550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 42673349 - 42673296
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  42673349 ggcttaattgcacttttcccc-ctatagtttgtcaattgtgcgattttgcacccc 42673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 1927772 - 1927825
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||||||| ||||||| ||||||||||  |||| |||||||||||||||    
T  1927772 ggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 4947384 - 4947433
Alignment:
Q  133 tcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcac 182  Q
    ||||||||||||||| ||  ||||||||||| ||||||||||||||||||    
T  4947384 tcaattgcacttttgccctctatctttttgccaattgtgcgattttgcac 4947433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 45060826 - 45060774
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||||||||| |||| |||||||||| |||||| ||||||||||||    
T  45060826 tgttcaattgcacttttgcccct-atctttttgccaattgttcgattttgcacc 45060774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 3644772 - 3644720
Alignment:
Q  10 ttaattgcacttttcccctctatctt-ttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| ||||||||| | ||| ||||||||||||||||||||||    
T  3644772 ttaattgcacttttgccctctatcctcttgctaattgtgcgattttgcacccc 3644720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 18874885 - 18874936
Alignment:
Q  133 tcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccct 185  Q
    ||||||||||||||  ||| |||||||| ||||||||||||||||||||||||    
T  18874885 tcaattgcactttttccccctatctttt-gctaattgtgcgattttgcaccct 18874936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26007180 - 26007235
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| |||||||| ||||  ||||| |||||||||||||||||||||    
T  26007180 aaggcttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcacccc 26007235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 1101141 - 1101087
Alignment:
Q  10 ttaattgcacttttcccctctatctttt-gttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||| ||| ||||||||| || ||||||||||||||||||||||||    
T  1101141 ttaattgcacttttgccc-ctatctttttgtcaattgtgcgattttgcaccccctc 1101087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 9026739 - 9026789
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||| |||||| | |||||||||||||||||||| ||||||||||||    
T  9026739 ttaattgcatttttcctc-ctatcttttgttaattgtgcaattttgcacccc 9026789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 14016014 - 14015964
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||  | |||||||||| ||||||||||||||||||||||    
T  14016014 ttaattgcacttttcatc-ctatcttttgctaattgtgcgattttgcacccc 14015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 23630086 - 23630035
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||| ||  |||| ||||| ||||||||||||||||||||||    
T  23630086 ttaattgcactttttcctcctattttttggtaattgtgcgattttgcacccc 23630035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 53766635 - 53766580
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||||||||||||||||| ||||  ||||  |||||||| |||||||||||    
T  53766635 aaggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccc 53766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 1101144 - 1101091
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||| ||||||||||||| |||| |||||||||  ||||||||||||||||||||    
T  1101144 tgtttaattgcacttttgcccct-atctttttgtcaattgtgcgattttgcaccc 1101091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 1101236 - 1101182
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||||||||||||||||  ||||||||| |  |||||||||||| |||||    
T  1101236 aggcttaattgcacttttcccccttatcttttgctttttgtgcgatttttcaccc 1101182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 3644538 - 3644588
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||||| | |||||||||||| ||||||||  |||||||||||    
T  3644538 ttaattgcactttttctctctatcttttgctaattgtgtaattttgcaccc 3644588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 3644775 - 3644721
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||| ||||||||||||| ||  |||| | |||||||||||||||||||||||||    
T  3644775 tgtttaattgcacttttgccctctatcctcttgctaattgtgcgattttgcaccc 3644721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 9027086 - 9027033
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||| ||||||||||| |||||||||| ||||||||| ||||| ||||||    
T  9027086 ggcttaatttcacttttcccc-ctatcttttgctaattgtgcaattttacacccc 9027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 14015697 - 14015751
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||  ||| |||||||||| ||| ||||||||||||||| ||||    
T  14015697 ttaattgcacttttttcctttatcttttgtcaatcgtgcgattttgcacctcctc 14015751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 17372528 - 17372474
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||| ||| |||||||||  || ||||||||||| ||||||||||||||||||||    
T  17372528 tgtttaatggcacttttgcaccctatctttttgccaattgtgcgattttgcaccc 17372474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 17372645 - 17372594
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| |||  |||  ||||||||||||||||||||||    
T  17372645 gcttaattgcacttttcccctatat--tttactaattgtgcgattttgcacccc 17372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 21896564 - 21896511
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||| |||| ||| |||| |||||| |||||||||||||||||||||    
T  21896564 ggcttaattgcattttttccc-ctatattttgtcaattgtgcgattttgcacccc 21896511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 26540694 - 26540747
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||| ||| |||| |||||| |||||||| |||||||||||||||    
T  26540694 ttaattgcacttttgccc-ctattttttgtcaattgtgcaattttgcaccccctc 26540747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 42672978 - 42673031
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  42672978 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcacccc 42673031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 47666389 - 47666335
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||| ||||  ||||  |||||||| ||||||||||||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcacccc 47666335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 48160387 - 48160333
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||| |||| ||||  ||||  |||||||||||||||||||||    
T  48160387 ggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcacccc 48160333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 4947386 - 4947439
Alignment:
Q  12 aattgcacttttcccctctatc-ttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||| ||||||||| |||||  |||||||||||||||||| |||||    
T  4947386 aattgcacttttgccctctatctttttgccaattgtgcgattttgcactccctc 4947439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 10293735 - 10293784
Alignment:
Q  12 aattgcacttttcccctctatctttt-gttaattgtgcgattttgcaccc 60  Q
    |||||||||||| |||  |||||||| |||||||||||||||||||||||    
T  10293735 aattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 10293784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 14015926 - 14015873
Alignment:
Q  130 tgttcaattgcacttttgtccct-tatctttttgctaattgtgcgattttgcac 182  Q
    |||| ||||||||||||| |||  ||||||||||| ||||||||||||||||||    
T  14015926 tgtttaattgcacttttgcccccctatctttttgccaattgtgcgattttgcac 14015873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 18875240 - 18875192
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||| ||| |||||||| ||||||||| |||||||||||||    
T  18875240 aattgcacttttgccccctatctttt-gctaattgtacgattttgcaccc 18875192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 47665910 - 47665963
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||||||||| |||  |||  ||||| |||||||||||||||||||    
T  47665910 aggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacc 47665963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 17440880 - 17440936
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctc 186  Q
    |||| ||||||| ||||| ||| ||| ||||||| ||||||||||||||| ||||||    
T  17440880 tgtttaattgcatttttgccccatatatttttgccaattgtgcgattttgaaccctc 17440936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 18875017 - 18875065
Alignment:
Q  12 aattgcacttttcccctctatctttt-gttaattgtgcgattttgcacc 59  Q
    |||||||||||| ||| ||||||||| | ||||||||||||||||||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 21895656 - 21895712
Alignment:
Q  6 aggcttaattgcactttt-cccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| |||| |||| |||||  ||||||| |||||||||||||    
T  21895656 aggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcacccc 21895712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 22429159 - 22429211
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    ||||||||||||||||| || |||| |||||  |||||||||| |||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcaccc 22429211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 40848519 - 40848574
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||| ||||  ||||  |||||||||||||| ||||||    
T  40848519 aaggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttacacccc 40848574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 47870822 - 47870877
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcg-attttgcacccc 61  Q
    |||||||||||||||||| ||| |||||||||| ||||| |||| ||||||||||||    
T  47870822 aggcttaattgcactttttccc-ctatcttttgctaattatgcgaattttgcacccc 47870877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 47871149 - 47871117
Alignment:
Q  158 ttttgctaattgtgcgattttgcaccctcactt 190  Q
    ||||||||||||||||||||||||||| |||||    
T  47871149 ttttgctaattgtgcgattttgcacccccactt 47871117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 56; Significance: 2e-23; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 45738 - 45683
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccct 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45738 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccct 45683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 45535 - 45593
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  45535 aaggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcactccctc 45593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 45861 - 45804
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  45861 aggcttaattgcacttttcccc-ctatcttttgccaattgtgcgattttgcaccccctc 45804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 52; Significance: 5e-21; HSPs: 4)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 6392 - 6451
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  6392 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 6451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 6628 - 6575
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6628 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 6750 - 6694
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  6750 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcaccccctc 6694  T

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Target: scaffold0319; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 6399 - 6447
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  6399 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 6447  T

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Target: scaffold0192 (Bit Score: 52; Significance: 5e-21; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 25425 - 25366
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  25425 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 25366  T

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Target: scaffold0192; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 25300 - 25247
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcacc 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25300 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 25247  T

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Target: scaffold0192; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 25418 - 25370
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  25418 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 25370  T

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Target: scaffold0001 (Bit Score: 50; Significance: 8e-20; HSPs: 8)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 438930 - 438987
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  438930 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 438987  T

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Target: scaffold0001; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 439021 - 439072
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgca 181  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  439021 tgttcaattgcacttttgccccttatctttttgctaattgtgcaattttgca 439072  T

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Target: scaffold0001; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 183718 - 183660
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||||    
T  183718 aaggcttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctc 183660  T

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Target: scaffold0001; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 439254 - 439196
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||||| |||  ||||||||| |||||||||||||||||| ||||||    
T  439254 aggcttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccctc 439196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 183367 - 183416
Alignment:
Q  10 ttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccc 60  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||||||    
T  183367 ttaattgcacttttcccc-ctatcttttgtcaattgtacgattttgcaccc 183416  T

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Target: scaffold0001; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 183595 - 183544
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgca 181  Q
    |||| ||||||||||||| ||| ||||||||| | |||||||||||||||||    
T  183595 tgtttaattgcacttttgccccctatctttttaccaattgtgcgattttgca 183544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 439248 - 439203
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgca 181  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||    
T  439248 aattgcactttttccccttatctttt-gctaattgtgcgattttgca 439203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 438935 - 438983
Alignment:
Q  135 aattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  438935 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 6152 - 6206
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacacccc 6206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 6849 - 6795
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||| ||||| || ||||||||||  |||||||||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 6795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 411923 - 411979
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  411923 ggcttaattgcactttacccc-ctatcttttgtcaattgtgcgattttgcaccccctc 411979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 412044 - 412090
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgatt 176  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  412044 tgttcaattgcacttttgccccctatctttttgctaattgtgcgatt 412090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 16976 - 17032
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccctc 186  Q
    |||||||||||||||||||||| ||||||||  |||||||| |||||||||||||||    
T  16976 tgttcaattgcacttttgtcccctatcttttctctaattgtacgattttgcaccctc 17032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 17209 - 17153
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||    
T  17209 ggcttaattgcacttttcccc-ctatcttttgctaattgtgcaattttgcaccgcctc 17153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 16853 - 16908
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||  |||||||||  |||||||| ||||||||||||| |||||||||||    
T  16853 ggcttaattgcctttttcccct--atcttttgctaattgtgcgattatgcaccccctc 16908  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 205685 - 205743
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    |||||||||||||| ||||| || |||||||||| |||||||||||||||||||||||||    
T  205685 aaggcttaattgcatttttctcc-ctatcttttgctaattgtgcgattttgcaccccctc 205743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 6609 - 6659
Alignment:
Q  9 cttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacc 59  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  6609 cttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacc 6659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 6806 - 6752
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||||||||||||||||| ||||||| |||||||||||| |  ||||||||||||    
T  6806 tgttcaattgcacttttgccccttatttttttgctaattctatgattttgcaccc 6752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 7452 - 7508
Alignment:
Q  4 caaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    |||||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||    
T  7452 caaggcttaattgcactttttccc-ctatcttttgctaattatgcgattttgcacccc 7508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 7653 - 7597
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||| ||||||||    
T  7653 ggcttaattgcactttttccc-ctatcttttgctaattgtgcgattttgtaccccctc 7597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 328 - 380
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||    
T  328 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 72967 - 73023
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccctc 64  Q
    ||||||||||| ||||||||| ||||||||| ||||||||| |||||||||| ||||    
T  72967 gcttaattgcatttttcccctttatcttttgctaattgtgcaattttgcaccgcctc 73023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 73086 - 73140
Alignment:
Q  130 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 184  Q
    |||| ||||||||||||||||| ||||||||||  || |||||||||||||||||    
T  73086 tgtttaattgcacttttgtcccctatctttttgtcaactgtgcgattttgcaccc 73140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 10010 - 10062
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgca 57  Q
    ||||||||||||||||||| ||| ||||||||||  |||||| ||||||||||    
T  10010 aaggcttaattgcacttttgccccctatcttttgccaattgtacgattttgca 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 38751 - 38695
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| ||| ||||  ||||  |||||||||||||||||||||    
T  38751 aaggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 38695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 20098 - 20043
Alignment:
Q  6 aggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||||||  |||  ||||| |||||||||||||||| ||||    
T  20098 aggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgcccccc 20043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 50560 - 50506
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccc 62  Q
    ||||||||||||||||||||| ||||  ||||  ||||||||||||||||||||||    
T  50560 ggcttaattgcacttttcccc-ctatagtttgccaattgtgcgattttgcaccccc 50506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 185328 - 185274
Alignment:
Q  7 ggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||||| | ||||  ||||  |||||||||||||||||||||    
T  185328 ggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacccc 185274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 184840 - 184893
Alignment:
Q  8 gcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcacccc 61  Q
    ||||||||||||||||| |||||||  ||||| || ||||| ||||||||||||    
T  184840 gcttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcacccc 184893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 9903 - 9960
Alignment:
Q  5 aaggcttaattgcacttttcccctctatcttttgttaattgtgcgattttgcaccccc 62  Q
    ||||||||||||||||||| ||| ||||  ||||  |||||||||||||| |||||||    
T  9903 aaggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcaccccc 9960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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