View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17905_high_9 (Length: 235)
Name: NF17905_high_9
Description: NF17905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17905_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 47421736 - 47421957
Alignment:
| Q |
1 |
caaataaacctcttccacccatcaatattatcattgccccaccactcccctaacaccactacctttcattctaattctaattcaaattcaatcaacttcc |
100 |
Q |
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| T |
47421736 |
caaataaacctcttccacccatcaatattatcattgccccaccactcccctaacaccactaccttt------aattctaattctaattcaatcaacttcc |
47421829 |
T |
|
| Q |
101 |
agatccaaattccaccaccgttgatcatcgattctagctggaccaaccacgaacttcttgtactcttcaagatcacatctaccatccacaatttcttccc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47421830 |
agatccaaattccaccaccgttgatcatcgattctagctggaccaaccacgaacttcttgtactcttcaagatcacatctaccatccacaatttcttccc |
47421929 |
T |
|
| Q |
201 |
agatcaactcatcacatgggatgatgtc |
228 |
Q |
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|
|||||||||||||||||||||| ||||| |
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| T |
47421930 |
agatcaactcatcacatgggatcatgtc |
47421957 |
T |
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