View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17906_high_16 (Length: 267)
Name: NF17906_high_16
Description: NF17906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17906_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 7325923 - 7326165
Alignment:
| Q |
11 |
caaaggttcaaggataa-ggtgggttttgtttctagttggataataatggattaaaattacattggtgtacttcttaattatttttcttttaagggaaaa |
109 |
Q |
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| T |
7325923 |
caaaggttcaaggataaaggtgggttttgtttctagttggataataatggattaaaattacattggtgtacttcttaattatttttcttttaagggaaaa |
7326022 |
T |
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| Q |
110 |
ttacattggtgtattagctattatacaaaaagtgttatgattgtaccc-nnnnnnnngtattatgaacactaacnnnnnnnnnaaaaatcggatattatg |
208 |
Q |
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| T |
7326023 |
ttacattggtgtattagctattatacaaaaagtgttatgattgtacccaaaataaaagtattatgaacaataactttttttttttaaatcggatattatg |
7326122 |
T |
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| Q |
209 |
aacactaaccgcaaaattaattcttaagttggacataactata |
251 |
Q |
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| T |
7326123 |
aacactaaccacaaaattaattcttaagttggacataactata |
7326165 |
T |
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