View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17906_low_28 (Length: 215)

Name: NF17906_low_28
Description: NF17906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17906_low_28
NF17906_low_28
[»] chr5 (29 HSPs)
chr5 (61-163)||(3526387-3526483)
chr5 (164-195)||(1743121-1743152)
chr5 (166-195)||(2848209-2848238)
chr5 (166-195)||(4417730-4417759)
chr5 (115-156)||(9202770-9202811)
chr5 (166-195)||(11897244-11897273)
chr5 (162-195)||(12463748-12463781)
chr5 (166-195)||(12891553-12891582)
chr5 (166-195)||(13621991-13622020)
chr5 (166-195)||(13956898-13956927)
chr5 (166-195)||(16603394-16603423)
chr5 (166-195)||(17545217-17545246)
chr5 (166-195)||(25648130-25648159)
chr5 (166-195)||(25729485-25729514)
chr5 (166-195)||(27765253-27765282)
chr5 (166-195)||(41477403-41477432)
chr5 (166-195)||(42320313-42320342)
chr5 (166-195)||(42916385-42916414)
chr5 (167-195)||(6518821-6518849)
chr5 (166-194)||(9125659-9125687)
chr5 (167-195)||(9835030-9835058)
chr5 (166-194)||(16971618-16971646)
chr5 (167-195)||(21749422-21749450)
chr5 (167-195)||(21918049-21918077)
chr5 (167-195)||(29713421-29713449)
chr5 (167-195)||(32505685-32505713)
chr5 (167-195)||(32706319-32706347)
chr5 (167-195)||(41179848-41179876)
chr5 (112-160)||(43300881-43300929)
[»] chr1 (42 HSPs)
chr1 (112-160)||(37842374-37842422)
chr1 (69-156)||(34290243-34290335)
chr1 (165-195)||(25999845-25999875)
chr1 (118-160)||(42174858-42174900)
chr1 (166-195)||(1151755-1151784)
chr1 (166-195)||(1570237-1570266)
chr1 (162-195)||(4482643-4482676)
chr1 (166-195)||(6438109-6438138)
chr1 (116-165)||(6556969-6557018)
chr1 (166-195)||(6893282-6893311)
chr1 (166-195)||(18216902-18216931)
chr1 (166-195)||(22563382-22563411)
chr1 (166-195)||(26584791-26584820)
chr1 (166-195)||(35605668-35605697)
chr1 (166-195)||(40519589-40519618)
chr1 (166-195)||(46965736-46965765)
chr1 (112-153)||(47432105-47432146)
chr1 (166-195)||(48638528-48638557)
chr1 (112-160)||(473167-473215)
chr1 (167-195)||(1836500-1836528)
chr1 (167-195)||(3269616-3269644)
chr1 (167-195)||(6702573-6702601)
chr1 (167-195)||(7166272-7166300)
chr1 (167-195)||(8865851-8865879)
chr1 (167-195)||(10664839-10664867)
chr1 (112-160)||(11893201-11893249)
chr1 (166-194)||(14760795-14760823)
chr1 (167-195)||(15819646-15819674)
chr1 (116-156)||(17577791-17577831)
chr1 (167-195)||(17671455-17671483)
chr1 (167-195)||(21265653-21265681)
chr1 (167-195)||(23933113-23933141)
chr1 (112-160)||(26779944-26779992)
chr1 (167-195)||(32594248-32594276)
chr1 (167-195)||(33207202-33207230)
chr1 (167-195)||(33254725-33254753)
chr1 (167-195)||(33274897-33274925)
chr1 (116-156)||(38867854-38867894)
chr1 (167-195)||(42054330-42054358)
chr1 (167-195)||(42490455-42490483)
chr1 (167-195)||(50899555-50899583)
chr1 (167-195)||(51050187-51050215)
[»] chr2 (23 HSPs)
chr2 (71-160)||(43984976-43985070)
chr2 (112-154)||(16398123-16398165)
chr2 (165-195)||(19281603-19281633)
chr2 (165-195)||(44948591-44948621)
chr2 (166-195)||(2289606-2289635)
chr2 (166-195)||(3446726-3446755)
chr2 (166-195)||(8250346-8250375)
chr2 (166-195)||(11050802-11050831)
chr2 (112-165)||(12289795-12289848)
chr2 (166-195)||(17078453-17078482)
chr2 (166-195)||(18694781-18694810)
chr2 (166-195)||(22653689-22653718)
chr2 (166-195)||(25857340-25857369)
chr2 (166-195)||(33228978-33229007)
chr2 (166-195)||(44822419-44822448)
chr2 (167-195)||(1260182-1260210)
chr2 (163-195)||(3438941-3438973)
chr2 (167-195)||(4183173-4183201)
chr2 (167-195)||(19684070-19684098)
chr2 (112-160)||(26202031-26202079)
chr2 (167-195)||(27297172-27297200)
chr2 (167-195)||(38400307-38400335)
chr2 (167-195)||(43895910-43895938)
[»] chr8 (34 HSPs)
chr8 (162-195)||(8265260-8265293)
chr8 (165-195)||(257534-257564)
chr8 (165-195)||(658356-658386)
chr8 (165-195)||(844092-844122)
chr8 (165-195)||(17698517-17698547)
chr8 (165-195)||(43656031-43656061)
chr8 (166-195)||(12270-12299)
chr8 (166-195)||(94556-94585)
chr8 (166-195)||(1937306-1937335)
chr8 (165-194)||(2079718-2079747)
chr8 (166-195)||(2168492-2168521)
chr8 (166-195)||(17027925-17027954)
chr8 (166-195)||(17558361-17558390)
chr8 (166-195)||(29514622-29514651)
chr8 (166-195)||(30972862-30972891)
chr8 (166-195)||(33604217-33604246)
chr8 (166-195)||(38745324-38745353)
chr8 (166-195)||(39362261-39362290)
chr8 (166-195)||(41689878-41689907)
chr8 (167-195)||(6280477-6280505)
chr8 (167-195)||(9187268-9187296)
chr8 (167-195)||(10736919-10736947)
chr8 (167-195)||(11875883-11875911)
chr8 (167-195)||(11890890-11890918)
chr8 (167-195)||(14876647-14876675)
chr8 (167-195)||(16449122-16449150)
chr8 (166-194)||(21548551-21548579)
chr8 (167-195)||(26022244-26022272)
chr8 (167-195)||(28909462-28909490)
chr8 (167-195)||(29716857-29716885)
chr8 (167-195)||(32719652-32719680)
chr8 (167-195)||(34413059-34413087)
chr8 (167-195)||(35939484-35939512)
chr8 (167-195)||(44340390-44340418)
[»] chr6 (22 HSPs)
chr6 (119-160)||(8201236-8201277)
chr6 (60-166)||(20368142-20368253)
chr6 (166-195)||(1968992-1969021)
chr6 (166-195)||(7177291-7177320)
chr6 (166-195)||(7545325-7545354)
chr6 (166-195)||(7865400-7865429)
chr6 (166-195)||(9246427-9246456)
chr6 (166-195)||(9435622-9435651)
chr6 (166-195)||(10934595-10934624)
chr6 (166-195)||(15091444-15091473)
chr6 (166-195)||(22574866-22574895)
chr6 (166-195)||(30885615-30885644)
chr6 (166-195)||(33573813-33573842)
chr6 (167-195)||(607184-607212)
chr6 (167-195)||(3794218-3794246)
chr6 (167-195)||(4408355-4408383)
chr6 (167-195)||(7207841-7207869)
chr6 (167-195)||(8857087-8857115)
chr6 (167-195)||(9372246-9372274)
chr6 (167-195)||(17441884-17441912)
chr6 (167-195)||(19953873-19953901)
chr6 (51-111)||(27693392-27693452)
[»] chr4 (38 HSPs)
chr4 (111-160)||(19250549-19250598)
chr4 (165-195)||(18360488-18360518)
chr4 (165-195)||(35219545-35219575)
chr4 (165-195)||(36602411-36602441)
chr4 (165-195)||(48949648-48949678)
chr4 (165-195)||(49901477-49901507)
chr4 (166-195)||(26868345-26868374)
chr4 (166-195)||(26919513-26919542)
chr4 (166-195)||(29329868-29329897)
chr4 (166-195)||(39023171-39023200)
chr4 (166-195)||(43596891-43596920)
chr4 (166-195)||(45126128-45126157)
chr4 (166-195)||(45849043-45849072)
chr4 (166-195)||(46775075-46775104)
chr4 (166-195)||(48569221-48569250)
chr4 (166-195)||(52483221-52483250)
chr4 (162-191)||(52757327-52757356)
chr4 (167-195)||(3764053-3764081)
chr4 (167-195)||(3847678-3847706)
chr4 (167-195)||(6371111-6371139)
chr4 (166-194)||(7686308-7686336)
chr4 (167-195)||(8433668-8433696)
chr4 (167-195)||(8965091-8965119)
chr4 (111-151)||(20052890-20052930)
chr4 (167-195)||(23705198-23705226)
chr4 (167-195)||(24680131-24680159)
chr4 (167-195)||(35465432-35465460)
chr4 (167-195)||(37935858-37935886)
chr4 (112-160)||(39691162-39691210)
chr4 (167-195)||(40051619-40051647)
chr4 (167-195)||(43147429-43147457)
chr4 (167-195)||(43207666-43207694)
chr4 (167-195)||(44602482-44602510)
chr4 (167-195)||(46105532-46105560)
chr4 (167-195)||(47934117-47934145)
chr4 (167-195)||(48798276-48798304)
chr4 (167-195)||(55251396-55251424)
chr4 (166-194)||(55853154-55853182)
[»] chr3 (40 HSPs)
chr3 (119-160)||(4526394-4526435)
chr3 (163-195)||(48739789-48739821)
chr3 (165-195)||(882384-882414)
chr3 (112-166)||(40665426-40665480)
chr3 (166-195)||(2522922-2522951)
chr3 (166-195)||(19550502-19550531)
chr3 (166-195)||(30555272-30555301)
chr3 (166-195)||(32256599-32256628)
chr3 (166-195)||(37800656-37800685)
chr3 (166-195)||(40192152-40192181)
chr3 (166-195)||(40933876-40933905)
chr3 (166-195)||(44652027-44652056)
chr3 (166-195)||(45701340-45701369)
chr3 (166-195)||(50496859-50496888)
chr3 (166-195)||(53347335-53347364)
chr3 (35-111)||(2304208-2304284)
chr3 (167-195)||(3748647-3748675)
chr3 (112-156)||(3845581-3845625)
chr3 (167-195)||(7269952-7269980)
chr3 (167-195)||(7920317-7920345)
chr3 (167-195)||(11820001-11820029)
chr3 (167-195)||(19999864-19999892)
chr3 (112-160)||(21367670-21367718)
chr3 (167-195)||(22501976-22502004)
chr3 (167-195)||(28550364-28550392)
chr3 (167-195)||(31327546-31327574)
chr3 (167-195)||(31327763-31327791)
chr3 (167-195)||(31529003-31529031)
chr3 (167-195)||(33225393-33225421)
chr3 (112-160)||(36887507-36887555)
chr3 (167-195)||(37488505-37488533)
chr3 (167-195)||(39300381-39300409)
chr3 (167-195)||(39966119-39966147)
chr3 (112-160)||(39980732-39980780)
chr3 (167-195)||(40548300-40548328)
chr3 (167-195)||(45551854-45551882)
chr3 (167-195)||(46795974-46796002)
chr3 (167-195)||(52410286-52410314)
chr3 (167-195)||(52945892-52945920)
chr3 (167-195)||(53163591-53163619)
[»] chr7 (24 HSPs)
chr7 (165-195)||(5990190-5990220)
chr7 (165-195)||(35950123-35950153)
chr7 (166-195)||(2681092-2681121)
chr7 (166-195)||(9877312-9877341)
chr7 (166-195)||(10244934-10244963)
chr7 (166-195)||(15238885-15238914)
chr7 (166-195)||(19753013-19753042)
chr7 (166-195)||(24061374-24061403)
chr7 (166-195)||(29617401-29617430)
chr7 (166-195)||(32074440-32074469)
chr7 (166-195)||(35815834-35815863)
chr7 (166-195)||(36389711-36389740)
chr7 (166-195)||(36469750-36469779)
chr7 (166-195)||(44616598-44616627)
chr7 (166-195)||(47641041-47641070)
chr7 (167-195)||(2228972-2229000)
chr7 (167-195)||(12640634-12640662)
chr7 (167-195)||(23102603-23102631)
chr7 (167-195)||(25833552-25833580)
chr7 (166-194)||(30940767-30940795)
chr7 (167-195)||(37300144-37300172)
chr7 (165-193)||(39182548-39182576)
chr7 (167-195)||(42443686-42443714)
chr7 (167-195)||(47999777-47999805)
[»] scaffold0707 (1 HSPs)
scaffold0707 (166-195)||(65-94)
[»] scaffold0608 (1 HSPs)
scaffold0608 (162-195)||(8958-8991)
[»] scaffold0121 (1 HSPs)
scaffold0121 (166-195)||(46522-46551)
[»] scaffold0024 (1 HSPs)
scaffold0024 (166-195)||(59779-59808)
[»] scaffold0009 (1 HSPs)
scaffold0009 (166-195)||(266742-266771)
[»] scaffold0002 (1 HSPs)
scaffold0002 (166-195)||(8870-8899)
[»] scaffold0445 (1 HSPs)
scaffold0445 (167-195)||(4059-4087)
[»] scaffold0275 (1 HSPs)
scaffold0275 (167-195)||(8818-8846)
[»] scaffold0128 (1 HSPs)
scaffold0128 (167-195)||(17617-17645)
[»] scaffold0100 (1 HSPs)
scaffold0100 (167-195)||(45881-45909)
[»] scaffold0088 (1 HSPs)
scaffold0088 (167-195)||(10871-10899)


Alignment Details
Target: chr5 (Bit Score: 72; Significance: 6e-33; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 3526387 - 3526483
Alignment:
Q  61 tgtaataatatttgagagaatttcttaaaacaacttatgatatgttcataatttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||| |||||    
T  3526387 tgtaataatatttgagagaatttcttaaaacaacttatgatatgttcataatttcagc------gtataagttcttcaacataacttataaaaataactt 3526480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Original strand, 1743121 - 1743152
Alignment:
Q  164 actatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||||    
T  1743121 actatccccgtgagcttagctcagttggtagg 1743152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 2848209 - 2848238
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  2848209 tatccccgtgagcttagctcagttggtagg 2848238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 4417759 - 4417730
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  4417759 tatccccgtgagcttagctcagttggtagg 4417730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 9202770 - 9202811
Alignment:
Q  115 cagcttatttttataagttcttcaacataacttataaaaaca 156  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||    
T  9202770 cagcttattttcataagttcttcaagataacttatgaaaaca 9202811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 11897244 - 11897273
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  11897244 tatccccgtgagcttagctcagttggtagg 11897273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 12463748 - 12463781
Alignment:
Q  162 taactatccccgtgagcttagctcagttggtagg 195  Q
    |||| |||||||||||||||||||||||||||||    
T  12463748 taaccatccccgtgagcttagctcagttggtagg 12463781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 12891553 - 12891582
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  12891553 tatccccgtgagcttagctcagttggtagg 12891582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 13622020 - 13621991
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  13622020 tatccccgtgagcttagctcagttggtagg 13621991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 13956898 - 13956927
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  13956898 tatccccgtgagcttagctcagttggtagg 13956927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 16603394 - 16603423
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  16603394 tatccccgtgagcttagctcagttggtagg 16603423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 17545246 - 17545217
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  17545246 tatccccgtgagcttagctcagttggtagg 17545217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 25648159 - 25648130
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  25648159 tatccccgtgagcttagctcagttggtagg 25648130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 25729514 - 25729485
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  25729514 tatccccgtgagcttagctcagttggtagg 25729485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 27765253 - 27765282
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  27765253 tatccccgtgagcttagctcagttggtagg 27765282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 41477432 - 41477403
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  41477432 tatccccgtgagcttagctcagttggtagg 41477403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 42320313 - 42320342
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  42320313 tatccccgtgagcttagctcagttggtagg 42320342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 42916385 - 42916414
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  42916385 tatccccgtgagcttagctcagttggtagg 42916414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 6518849 - 6518821
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  6518849 atccccgtgagcttagctcagttggtagg 6518821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 9125659 - 9125687
Alignment:
Q  166 tatccccgtgagcttagctcagttggtag 194  Q
    |||||||||||||||||||||||||||||    
T  9125659 tatccccgtgagcttagctcagttggtag 9125687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 9835030 - 9835058
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  9835030 atccccgtgagcttagctcagttggtagg 9835058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 16971618 - 16971646
Alignment:
Q  166 tatccccgtgagcttagctcagttggtag 194  Q
    |||||||||||||||||||||||||||||    
T  16971618 tatccccgtgagcttagctcagttggtag 16971646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 21749450 - 21749422
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  21749450 atccccgtgagcttagctcagttggtagg 21749422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 21918049 - 21918077
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  21918049 atccccgtgagcttagctcagttggtagg 21918077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 29713449 - 29713421
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  29713449 atccccgtgagcttagctcagttggtagg 29713421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 32505685 - 32505713
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  32505685 atccccgtgagcttagctcagttggtagg 32505713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 32706319 - 32706347
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  32706319 atccccgtgagcttagctcagttggtagg 32706347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 41179876 - 41179848
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  41179876 atccccgtgagcttagctcagttggtagg 41179848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 43300929 - 43300881
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    |||||||||||||| ||||||||| ||| ||| |||| |||||||||||    
T  43300929 tttcagcttattttcataagttctccaagatagcttacaaaaacaactt 43300881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 37842374 - 37842422
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  37842374 tttcagcttatttttataagttcttcaagatagcttatgaaaacaactt 37842422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 34290335 - 34290243
Alignment:
Q  69 tatttgagagaatttcttaaaacaacttatgatatgttcataa-----tttcagcttatttttataagttcttcaacataacttataaaaaca 156  Q
    |||||| |||||||| |||||| | ||||||| || |||||||     |||||||||||||| ||||||||||||| ||| ||||| ||||||    
T  34290335 tatttgggagaatttattaaaaaagcttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaaca 34290243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 25999845 - 25999875
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  25999845 ctatccccgtgagcttagctcagttggtagg 25999875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 42174900 - 42174858
Alignment:
Q  118 cttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||    
T  42174900 cttattttcataagttctccaatataacttataaaaacaactt 42174858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 1151755 - 1151784
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  1151755 tatccccgtgagcttagctcagttggtagg 1151784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 1570266 - 1570237
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  1570266 tatccccgtgagcttagctcagttggtagg 1570237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 4482676 - 4482643
Alignment:
Q  162 taactatccccgtgagcttagctcagttggtagg 195  Q
    |||| |||||||||||||||||||||||||||||    
T  4482676 taaccatccccgtgagcttagctcagttggtagg 4482643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 6438138 - 6438109
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  6438138 tatccccgtgagcttagctcagttggtagg 6438109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 6557018 - 6556969
Alignment:
Q  116 agcttatttttataagttcttcaacataacttataaaaacaacttctaac 165  Q
    |||||||| | |||||||||| || |||||||||||||||||||| ||||    
T  6557018 agcttattgtcataagttctttaatataacttataaaaacaacttataac 6556969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 6893311 - 6893282
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  6893311 tatccccgtgagcttagctcagttggtagg 6893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 18216902 - 18216931
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  18216902 tatccccgtgagcttagctcagttggtagg 18216931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 22563382 - 22563411
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  22563382 tatccccgtgagcttagctcagttggtagg 22563411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 26584820 - 26584791
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  26584820 tatccccgtgagcttagctcagttggtagg 26584791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 35605697 - 35605668
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  35605697 tatccccgtgagcttagctcagttggtagg 35605668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 40519618 - 40519589
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  40519618 tatccccgtgagcttagctcagttggtagg 40519589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 46965736 - 46965765
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  46965736 tatccccgtgagcttagctcagttggtagg 46965765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 47432146 - 47432105
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaa 153  Q
    |||||||||||||| |||| |||||||| |||||||||||||    
T  47432146 tttcagcttattttcataaattcttcaatataacttataaaa 47432105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 48638528 - 48638557
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  48638528 tatccccgtgagcttagctcagttggtagg 48638557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 473215 - 473167
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    ||||| |||||||| ||||||||| ||| | ||||||||||||||||||    
T  473215 tttcaacttattttcataagttctccaatagaacttataaaaacaactt 473167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 1836500 - 1836528
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  1836500 atccccgtgagcttagctcagttggtagg 1836528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 3269616 - 3269644
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  3269616 atccccgtgagcttagctcagttggtagg 3269644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 6702573 - 6702601
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  6702573 atccccgtgagcttagctcagttggtagg 6702601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 7166300 - 7166272
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  7166300 atccccgtgagcttagctcagttggtagg 7166272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 8865851 - 8865879
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  8865851 atccccgtgagcttagctcagttggtagg 8865879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 10664867 - 10664839
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  10664867 atccccgtgagcttagctcagttggtagg 10664839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 11893249 - 11893201
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    |||||||| ||||| || |||||||||||||| ||||| ||||||||||    
T  11893249 tttcagctaattttcattagttcttcaacatagcttatgaaaacaactt 11893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 14760823 - 14760795
Alignment:
Q  166 tatccccgtgagcttagctcagttggtag 194  Q
    |||||||||||||||||||||||||||||    
T  14760823 tatccccgtgagcttagctcagttggtag 14760795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 15819674 - 15819646
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  15819674 atccccgtgagcttagctcagttggtagg 15819646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 17577791 - 17577831
Alignment:
Q  116 agcttatttttataagttcttcaacataacttataaaaaca 156  Q
    ||||||||||| |||||||||||| |||||||| |||||||    
T  17577791 agcttatttttgtaagttcttcaagataacttacaaaaaca 17577831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 17671483 - 17671455
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  17671483 atccccgtgagcttagctcagttggtagg 17671455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 21265653 - 21265681
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  21265653 atccccgtgagcttagctcagttggtagg 21265681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 23933141 - 23933113
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  23933141 atccccgtgagcttagctcagttggtagg 23933113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 26779944 - 26779992
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    ||||| |||||||| ||||||||||||| ||| ||||| ||||||||||    
T  26779944 tttcaacttattttcataagttcttcaagatagcttatgaaaacaactt 26779992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 32594248 - 32594276
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  32594248 atccccgtgagcttagctcagttggtagg 32594276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 33207202 - 33207230
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  33207202 atccccgtgagcttagctcagttggtagg 33207230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 33254725 - 33254753
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  33254725 atccccgtgagcttagctcagttggtagg 33254753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 33274897 - 33274925
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  33274897 atccccgtgagcttagctcagttggtagg 33274925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 38867854 - 38867894
Alignment:
Q  116 agcttatttttataagttcttcaacataacttataaaaaca 156  Q
    |||||||||| ||||||||||||| ||||||||| ||||||    
T  38867854 agcttattttcataagttcttcaagataacttatgaaaaca 38867894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 42054330 - 42054358
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  42054330 atccccgtgagcttagctcagttggtagg 42054358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 42490483 - 42490455
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  42490483 atccccgtgagcttagctcagttggtagg 42490455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 50899583 - 50899555
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  50899583 atccccgtgagcttagctcagttggtagg 50899555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 51050187 - 51050215
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  51050187 atccccgtgagcttagctcagttggtagg 51050215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000007; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 43984976 - 43985070
Alignment:
Q  71 tttgagagaatttcttaaaacaacttatgatatgttcataat-----ttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    ||||||||||||| ||||| || ||||| |||||||||| ||     ||||||||||||| ||||| ||||||| ||| ||||| ||||||||||    
T  43984976 tttgagagaatttgttaaatcagcttataatatgttcattatctattttcagcttattttcataagctcttcaagatagcttatgaaaacaactt 43985070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 16398165 - 16398123
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaa 154  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||    
T  16398165 tttcagcttattttcataagttctccaacataacttatgaaaa 16398123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 19281603 - 19281633
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  19281603 ctatccccgtgagcttagctcagttggtagg 19281633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 44948591 - 44948621
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  44948591 ctatccccgtgagcttagctcagttggtagg 44948621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 2289606 - 2289635
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  2289606 tatccccgtgagcttagctcagttggtagg 2289635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 3446726 - 3446755
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  3446726 tatccccgtgagcttagctcagttggtagg 3446755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 8250375 - 8250346
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  8250375 tatccccgtgagcttagctcagttggtagg 8250346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 11050831 - 11050802
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  11050831 tatccccgtgagcttagctcagttggtagg 11050802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 12289848 - 12289795
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaacttctaac 165  Q
    ||||| |||||||| ||||||||| ||| |||| ||||||||||||||| ||||    
T  12289848 tttcaacttattttcataagttctccaatataaattataaaaacaacttataac 12289795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 17078453 - 17078482
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  17078453 tatccccgtgagcttagctcagttggtagg 17078482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 18694781 - 18694810
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  18694781 tatccccgtgagcttagctcagttggtagg 18694810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 22653718 - 22653689
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  22653718 tatccccgtgagcttagctcagttggtagg 22653689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 25857369 - 25857340
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  25857369 tatccccgtgagcttagctcagttggtagg 25857340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 33229007 - 33228978
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  33229007 tatccccgtgagcttagctcagttggtagg 33228978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 44822419 - 44822448
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  44822419 tatccccgtgagcttagctcagttggtagg 44822448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 1260182 - 1260210
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  1260182 atccccgtgagcttagctcagttggtagg 1260210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 3438941 - 3438973
Alignment:
Q  163 aactatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||| ||||||||||||||||    
T  3438941 aactatccccgtgagcgtagctcagttggtagg 3438973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 4183173 - 4183201
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  4183173 atccccgtgagcttagctcagttggtagg 4183201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 19684070 - 19684098
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  19684070 atccccgtgagcttagctcagttggtagg 19684098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 26202079 - 26202031
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    ||||| |||||||| ||||||||| ||| ||| ||||||||||||||||    
T  26202079 tttcaacttattttcataagttctccaatatatcttataaaaacaactt 26202031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 27297172 - 27297200
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  27297172 atccccgtgagcttagctcagttggtagg 27297200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 38400307 - 38400335
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  38400307 atccccgtgagcttagctcagttggtagg 38400335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 43895910 - 43895938
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  43895910 atccccgtgagcttagctcagttggtagg 43895938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 8265260 - 8265293
Alignment:
Q  162 taactatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||||||    
T  8265260 taactatccccgtgagcttagctcagttggtagg 8265293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 257534 - 257564
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  257534 ctatccccgtgagcttagctcagttggtagg 257564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Complemental strand, 658386 - 658356
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  658386 ctatccccgtgagcttagctcagttggtagg 658356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Complemental strand, 844122 - 844092
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  844122 ctatccccgtgagcttagctcagttggtagg 844092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 17698517 - 17698547
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  17698517 ctatccccgtgagcttagctcagttggtagg 17698547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 43656031 - 43656061
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  43656031 ctatccccgtgagcttagctcagttggtagg 43656061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 12299 - 12270
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  12299 tatccccgtgagcttagctcagttggtagg 12270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 94585 - 94556
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  94585 tatccccgtgagcttagctcagttggtagg 94556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 1937306 - 1937335
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  1937306 tatccccgtgagcttagctcagttggtagg 1937335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 2079747 - 2079718
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtag 194  Q
    ||||||||||||||||||||||||||||||    
T  2079747 ctatccccgtgagcttagctcagttggtag 2079718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 2168521 - 2168492
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  2168521 tatccccgtgagcttagctcagttggtagg 2168492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 17027954 - 17027925
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  17027954 tatccccgtgagcttagctcagttggtagg 17027925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 17558390 - 17558361
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  17558390 tatccccgtgagcttagctcagttggtagg 17558361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 29514622 - 29514651
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  29514622 tatccccgtgagcttagctcagttggtagg 29514651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 30972891 - 30972862
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  30972891 tatccccgtgagcttagctcagttggtagg 30972862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 33604246 - 33604217
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  33604246 tatccccgtgagcttagctcagttggtagg 33604217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 38745353 - 38745324
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  38745353 tatccccgtgagcttagctcagttggtagg 38745324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 39362261 - 39362290
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  39362261 tatccccgtgagcttagctcagttggtagg 39362290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 41689878 - 41689907
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  41689878 tatccccgtgagcttagctcagttggtagg 41689907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 6280477 - 6280505
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  6280477 atccccgtgagcttagctcagttggtagg 6280505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 9187296 - 9187268
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  9187296 atccccgtgagcttagctcagttggtagg 9187268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 10736947 - 10736919
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  10736947 atccccgtgagcttagctcagttggtagg 10736919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 11875883 - 11875911
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  11875883 atccccgtgagcttagctcagttggtagg 11875911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 11890890 - 11890918
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  11890890 atccccgtgagcttagctcagttggtagg 11890918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 14876675 - 14876647
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  14876675 atccccgtgagcttagctcagttggtagg 14876647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 16449122 - 16449150
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  16449122 atccccgtgagcttagctcagttggtagg 16449150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 21548579 - 21548551
Alignment:
Q  166 tatccccgtgagcttagctcagttggtag 194  Q
    |||||||||||||||||||||||||||||    
T  21548579 tatccccgtgagcttagctcagttggtag 21548551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 26022244 - 26022272
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  26022244 atccccgtgagcttagctcagttggtagg 26022272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 28909462 - 28909490
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  28909462 atccccgtgagcttagctcagttggtagg 28909490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 29716857 - 29716885
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  29716857 atccccgtgagcttagctcagttggtagg 29716885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 32719680 - 32719652
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  32719680 atccccgtgagcttagctcagttggtagg 32719652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 34413059 - 34413087
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  34413059 atccccgtgagcttagctcagttggtagg 34413087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 35939484 - 35939512
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  35939484 atccccgtgagcttagctcagttggtagg 35939512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 44340418 - 44340390
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  44340418 atccccgtgagcttagctcagttggtagg 44340390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 8201277 - 8201236
Alignment:
Q  119 ttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  8201277 ttattttcataagttctccaacataacttataaaaacaactt 8201236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 20368142 - 20368253
Alignment:
Q  60 ttgtaataatatttgagagaatttcttaaaacaacttatgatatgttcataa-----tttcagcttatttttataagttcttcaacataacttataaaaa 154  Q
    |||||| | |||||| ||||| || | |||||||||||||| ||||||||||     ||||| |||||||| ||||||||| ||| | | ||||| ||||    
T  20368142 ttgtaagactatttgggagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaa 20368241  T
Q  155 caacttctaact 166  Q
    |||||| |||||    
T  20368242 caacttataact 20368253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 1968992 - 1969021
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  1968992 tatccccgtgagcttagctcagttggtagg 1969021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 7177291 - 7177320
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  7177291 tatccccgtgagcttagctcagttggtagg 7177320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 7545325 - 7545354
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  7545325 tatccccgtgagcttagctcagttggtagg 7545354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 7865429 - 7865400
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  7865429 tatccccgtgagcttagctcagttggtagg 7865400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 9246456 - 9246427
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  9246456 tatccccgtgagcttagctcagttggtagg 9246427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 9435622 - 9435651
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  9435622 tatccccgtgagcttagctcagttggtagg 9435651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 10934595 - 10934624
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  10934595 tatccccgtgagcttagctcagttggtagg 10934624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 15091444 - 15091473
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  15091444 tatccccgtgagcttagctcagttggtagg 15091473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 22574866 - 22574895
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  22574866 tatccccgtgagcttagctcagttggtagg 22574895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 30885644 - 30885615
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  30885644 tatccccgtgagcttagctcagttggtagg 30885615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 33573813 - 33573842
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  33573813 tatccccgtgagcttagctcagttggtagg 33573842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 607184 - 607212
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  607184 atccccgtgagcttagctcagttggtagg 607212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 3794246 - 3794218
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  3794246 atccccgtgagcttagctcagttggtagg 3794218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 4408355 - 4408383
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  4408355 atccccgtgagcttagctcagttggtagg 4408383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 7207841 - 7207869
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  7207841 atccccgtgagcttagctcagttggtagg 7207869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 8857087 - 8857115
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  8857087 atccccgtgagcttagctcagttggtagg 8857115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 9372274 - 9372246
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  9372274 atccccgtgagcttagctcagttggtagg 9372246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 17441912 - 17441884
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  17441912 atccccgtgagcttagctcagttggtagg 17441884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 19953901 - 19953873
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  19953901 atccccgtgagcttagctcagttggtagg 19953873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 27693392 - 27693452
Alignment:
Q  51 cataaatacttgtaataatatttgagagaatttcttaaaacaacttatgatatgttcataa 111  Q
    ||||| ||||||| | | ||||||||||||||| |  ||||||||||||| ||||||||||    
T  27693392 cataagtacttgtgagactatttgagagaatttatggaaacaacttatgacatgttcataa 27693452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 19250598 - 19250549
Alignment:
Q  111 atttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    |||||| |||||||||||| | ||||||| ||||||||||||||||||||    
T  19250598 atttcaacttatttttatatgctcttcaagataacttataaaaacaactt 19250549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 18360488 - 18360518
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  18360488 ctatccccgtgagcttagctcagttggtagg 18360518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Complemental strand, 35219575 - 35219545
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  35219575 ctatccccgtgagcttagctcagttggtagg 35219545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Complemental strand, 36602441 - 36602411
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  36602441 ctatccccgtgagcttagctcagttggtagg 36602411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 48949648 - 48949678
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  48949648 ctatccccgtgagcttagctcagttggtagg 48949678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 49901477 - 49901507
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  49901477 ctatccccgtgagcttagctcagttggtagg 49901507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 26868345 - 26868374
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  26868345 tatccccgtgagcttagctcagttggtagg 26868374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 26919542 - 26919513
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  26919542 tatccccgtgagcttagctcagttggtagg 26919513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 29329897 - 29329868
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  29329897 tatccccgtgagcttagctcagttggtagg 29329868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 39023171 - 39023200
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  39023171 tatccccgtgagcttagctcagttggtagg 39023200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 43596891 - 43596920
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  43596891 tatccccgtgagcttagctcagttggtagg 43596920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 45126128 - 45126157
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  45126128 tatccccgtgagcttagctcagttggtagg 45126157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 45849043 - 45849072
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  45849043 tatccccgtgagcttagctcagttggtagg 45849072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 46775104 - 46775075
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  46775104 tatccccgtgagcttagctcagttggtagg 46775075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 48569250 - 48569221
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  48569250 tatccccgtgagcttagctcagttggtagg 48569221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 52483250 - 52483221
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  52483250 tatccccgtgagcttagctcagttggtagg 52483221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 191
Target Start/End: Complemental strand, 52757356 - 52757327
Alignment:
Q  162 taactatccccgtgagcttagctcagttgg 191  Q
    ||||||||||||||||||||||||||||||    
T  52757356 taactatccccgtgagcttagctcagttgg 52757327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 3764081 - 3764053
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  3764081 atccccgtgagcttagctcagttggtagg 3764053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 3847678 - 3847706
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  3847678 atccccgtgagcttagctcagttggtagg 3847706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 6371111 - 6371139
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  6371111 atccccgtgagcttagctcagttggtagg 6371139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 7686336 - 7686308
Alignment:
Q  166 tatccccgtgagcttagctcagttggtag 194  Q
    |||||||||||||||||||||||||||||    
T  7686336 tatccccgtgagcttagctcagttggtag 7686308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 8433696 - 8433668
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  8433696 atccccgtgagcttagctcagttggtagg 8433668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 8965091 - 8965119
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  8965091 atccccgtgagcttagctcagttggtagg 8965119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 20052890 - 20052930
Alignment:
Q  111 atttcagcttatttttataagttcttcaacataacttataa 151  Q
    |||||| |||||||||||||| ||||||| |||||||||||    
T  20052890 atttcaacttatttttataagctcttcaagataacttataa 20052930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 23705226 - 23705198
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  23705226 atccccgtgagcttagctcagttggtagg 23705198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 24680159 - 24680131
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  24680159 atccccgtgagcttagctcagttggtagg 24680131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 35465432 - 35465460
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  35465432 atccccgtgagcttagctcagttggtagg 35465460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 37935858 - 37935886
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  37935858 atccccgtgagcttagctcagttggtagg 37935886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 39691162 - 39691210
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    ||||| ||||||||  |||||||||||| ||| ||||||||||||||||    
T  39691162 tttcaacttattttcgtaagttcttcaatatagcttataaaaacaactt 39691210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 40051619 - 40051647
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  40051619 atccccgtgagcttagctcagttggtagg 40051647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 43147457 - 43147429
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  43147457 atccccgtgagcttagctcagttggtagg 43147429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 43207666 - 43207694
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  43207666 atccccgtgagcttagctcagttggtagg 43207694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 44602482 - 44602510
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  44602482 atccccgtgagcttagctcagttggtagg 44602510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 46105532 - 46105560
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  46105532 atccccgtgagcttagctcagttggtagg 46105560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 47934145 - 47934117
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  47934145 atccccgtgagcttagctcagttggtagg 47934117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 48798276 - 48798304
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  48798276 atccccgtgagcttagctcagttggtagg 48798304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 55251424 - 55251396
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  55251424 atccccgtgagcttagctcagttggtagg 55251396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 55853182 - 55853154
Alignment:
Q  166 tatccccgtgagcttagctcagttggtag 194  Q
    |||||||||||||||||||||||||||||    
T  55853182 tatccccgtgagcttagctcagttggtag 55853154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 4526394 - 4526435
Alignment:
Q  119 ttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  4526394 ttattttcataagttcttcaaaataacttataaaaacaactt 4526435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 48739821 - 48739789
Alignment:
Q  163 aactatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||||    
T  48739821 aactatccccgtgagcttagctcagttggtagg 48739789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 882384 - 882414
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  882384 ctatccccgtgagcttagctcagttggtagg 882414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 40665480 - 40665426
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaacttctaact 166  Q
    |||||||||||||||||||| ||| ||| ||||||||| |||||| ||| |||||    
T  40665480 tttcagcttatttttataagctctccaagataacttatgaaaacatcttataact 40665426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 2522922 - 2522951
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  2522922 tatccccgtgagcttagctcagttggtagg 2522951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 19550502 - 19550531
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  19550502 tatccccgtgagcttagctcagttggtagg 19550531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 30555301 - 30555272
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  30555301 tatccccgtgagcttagctcagttggtagg 30555272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 32256628 - 32256599
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  32256628 tatccccgtgagcttagctcagttggtagg 32256599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 37800685 - 37800656
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  37800685 tatccccgtgagcttagctcagttggtagg 37800656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 40192152 - 40192181
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  40192152 tatccccgtgagcttagctcagttggtagg 40192181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 40933905 - 40933876
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  40933905 tatccccgtgagcttagctcagttggtagg 40933876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 44652056 - 44652027
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  44652056 tatccccgtgagcttagctcagttggtagg 44652027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 45701340 - 45701369
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  45701340 tatccccgtgagcttagctcagttggtagg 45701369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 50496888 - 50496859
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  50496888 tatccccgtgagcttagctcagttggtagg 50496859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 53347364 - 53347335
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  53347364 tatccccgtgagcttagctcagttggtagg 53347335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 2304208 - 2304284
Alignment:
Q  35 tgaacttatctaataacataaatacttgtaataatatttgagagaatttcttaaaacaacttatgatatgttcataa 111  Q
    |||||| ||||| || |||||| |||||| | | |||||||||||| || | ||| |||||||||| ||||||||||    
T  2304208 tgaactgatctactagcataaacacttgtgaaactatttgagagaaattatgaaagcaacttatgacatgttcataa 2304284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 3748675 - 3748647
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  3748675 atccccgtgagcttagctcagttggtagg 3748647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 3845581 - 3845625
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaaca 156  Q
    |||||||||||||| ||||||||| ||| ||||||||| ||||||    
T  3845581 tttcagcttattttcataagttctccaagataacttatgaaaaca 3845625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 7269952 - 7269980
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  7269952 atccccgtgagcttagctcagttggtagg 7269980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 7920317 - 7920345
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  7920317 atccccgtgagcttagctcagttggtagg 7920345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 11820001 - 11820029
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  11820001 atccccgtgagcttagctcagttggtagg 11820029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 19999864 - 19999892
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  19999864 atccccgtgagcttagctcagttggtagg 19999892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 21367718 - 21367670
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    |||||||||||||| ||||||||| ||| ||| ||||| ||||||||||    
T  21367718 tttcagcttattttcataagttctccaagatagcttatgaaaacaactt 21367670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 22502004 - 22501976
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  22502004 atccccgtgagcttagctcagttggtagg 22501976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 28550392 - 28550364
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  28550392 atccccgtgagcttagctcagttggtagg 28550364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 31327574 - 31327546
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  31327574 atccccgtgagcttagctcagttggtagg 31327546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 31327791 - 31327763
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  31327791 atccccgtgagcttagctcagttggtagg 31327763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 31529031 - 31529003
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  31529031 atccccgtgagcttagctcagttggtagg 31529003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 33225421 - 33225393
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  33225421 atccccgtgagcttagctcagttggtagg 33225393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 36887555 - 36887507
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    |||||||||||||| ||||||||||||| ||  ||||| ||||||||||    
T  36887555 tttcagcttattttcataagttcttcaagatggcttatgaaaacaactt 36887507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 37488533 - 37488505
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  37488533 atccccgtgagcttagctcagttggtagg 37488505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 39300381 - 39300409
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  39300381 atccccgtgagcttagctcagttggtagg 39300409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 39966147 - 39966119
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  39966147 atccccgtgagcttagctcagttggtagg 39966119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 39980780 - 39980732
Alignment:
Q  112 tttcagcttatttttataagttcttcaacataacttataaaaacaactt 160  Q
    ||||| |||||||| ||||||||| ||| ||| ||||||||||||||||    
T  39980780 tttcaacttattttcataagttctccaatatagcttataaaaacaactt 39980732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 40548300 - 40548328
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  40548300 atccccgtgagcttagctcagttggtagg 40548328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 45551882 - 45551854
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  45551882 atccccgtgagcttagctcagttggtagg 45551854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 46796002 - 46795974
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  46796002 atccccgtgagcttagctcagttggtagg 46795974  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 52410314 - 52410286
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  52410314 atccccgtgagcttagctcagttggtagg 52410286  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 52945892 - 52945920
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  52945892 atccccgtgagcttagctcagttggtagg 52945920  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 53163591 - 53163619
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  53163591 atccccgtgagcttagctcagttggtagg 53163619  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Complemental strand, 5990220 - 5990190
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  5990220 ctatccccgtgagcttagctcagttggtagg 5990190  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 35950123 - 35950153
Alignment:
Q  165 ctatccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||||    
T  35950123 ctatccccgtgagcttagctcagttggtagg 35950153  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 2681092 - 2681121
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  2681092 tatccccgtgagcttagctcagttggtagg 2681121  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 9877341 - 9877312
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  9877341 tatccccgtgagcttagctcagttggtagg 9877312  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 10244963 - 10244934
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  10244963 tatccccgtgagcttagctcagttggtagg 10244934  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 15238885 - 15238914
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  15238885 tatccccgtgagcttagctcagttggtagg 15238914  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 19753042 - 19753013
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  19753042 tatccccgtgagcttagctcagttggtagg 19753013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 24061403 - 24061374
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  24061403 tatccccgtgagcttagctcagttggtagg 24061374  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 29617401 - 29617430
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  29617401 tatccccgtgagcttagctcagttggtagg 29617430  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 32074469 - 32074440
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  32074469 tatccccgtgagcttagctcagttggtagg 32074440  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 35815834 - 35815863
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  35815834 tatccccgtgagcttagctcagttggtagg 35815863  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 36389740 - 36389711
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  36389740 tatccccgtgagcttagctcagttggtagg 36389711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 36469779 - 36469750
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  36469779 tatccccgtgagcttagctcagttggtagg 36469750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 44616598 - 44616627
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  44616598 tatccccgtgagcttagctcagttggtagg 44616627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 47641041 - 47641070
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  47641041 tatccccgtgagcttagctcagttggtagg 47641070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 2228972 - 2229000
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  2228972 atccccgtgagcttagctcagttggtagg 2229000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 12640662 - 12640634
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  12640662 atccccgtgagcttagctcagttggtagg 12640634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 23102631 - 23102603
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  23102631 atccccgtgagcttagctcagttggtagg 23102603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 25833552 - 25833580
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  25833552 atccccgtgagcttagctcagttggtagg 25833580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 30940767 - 30940795
Alignment:
Q  166 tatccccgtgagcttagctcagttggtag 194  Q
    |||||||||||||||||||||||||||||    
T  30940767 tatccccgtgagcttagctcagttggtag 30940795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 37300172 - 37300144
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  37300172 atccccgtgagcttagctcagttggtagg 37300144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 39182576 - 39182548
Alignment:
Q  165 ctatccccgtgagcttagctcagttggta 193  Q
    |||||||||||||||||||||||||||||    
T  39182576 ctatccccgtgagcttagctcagttggta 39182548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 42443686 - 42443714
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  42443686 atccccgtgagcttagctcagttggtagg 42443714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 47999777 - 47999805
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  47999777 atccccgtgagcttagctcagttggtagg 47999805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 94 - 65
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  94 tatccccgtgagcttagctcagttggtagg 65  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 8958 - 8991
Alignment:
Q  162 taactatccccgtgagcttagctcagttggtagg 195  Q
    |||| |||||||||||||||||||||||||||||    
T  8958 taaccatccccgtgagcttagctcagttggtagg 8991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 46522 - 46551
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  46522 tatccccgtgagcttagctcagttggtagg 46551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 59779 - 59808
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  59779 tatccccgtgagcttagctcagttggtagg 59808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 266771 - 266742
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  266771 tatccccgtgagcttagctcagttggtagg 266742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Complemental strand, 8899 - 8870
Alignment:
Q  166 tatccccgtgagcttagctcagttggtagg 195  Q
    ||||||||||||||||||||||||||||||    
T  8899 tatccccgtgagcttagctcagttggtagg 8870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 4087 - 4059
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  4087 atccccgtgagcttagctcagttggtagg 4059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 8818 - 8846
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  8818 atccccgtgagcttagctcagttggtagg 8846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 17617 - 17645
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  17617 atccccgtgagcttagctcagttggtagg 17645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 45881 - 45909
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  45881 atccccgtgagcttagctcagttggtagg 45909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 10899 - 10871
Alignment:
Q  167 atccccgtgagcttagctcagttggtagg 195  Q
    |||||||||||||||||||||||||||||    
T  10899 atccccgtgagcttagctcagttggtagg 10871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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