View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17908_low_1 (Length: 648)

Name: NF17908_low_1
Description: NF17908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17908_low_1
NF17908_low_1
[»] chr7 (61 HSPs)
chr7 (258-641)||(26009126-26009512)
chr7 (142-263)||(26011494-26011616)
chr7 (484-641)||(20913865-20914022)
chr7 (484-641)||(26150530-26150685)
chr7 (18-129)||(11016886-11016999)
chr7 (34-129)||(34854719-34854816)
chr7 (18-129)||(38975822-38975935)
chr7 (484-632)||(15815782-15815929)
chr7 (484-641)||(868170-868326)
chr7 (484-641)||(1229447-1229603)
chr7 (22-129)||(4290562-4290671)
chr7 (34-119)||(29053338-29053425)
chr7 (18-119)||(42628322-42628425)
chr7 (18-114)||(48000769-48000867)
chr7 (36-119)||(7671937-7672022)
chr7 (36-129)||(41018254-41018349)
chr7 (33-127)||(15027561-15027657)
chr7 (34-119)||(4649347-4649436)
chr7 (18-72)||(11016877-11016931)
chr7 (489-538)||(16463774-16463823)
chr7 (21-81)||(48000705-48000765)
chr7 (18-69)||(45231929-45231980)
chr7 (420-474)||(7872738-7872792)
chr7 (40-119)||(27028823-27028904)
chr7 (420-474)||(46987103-46987157)
chr7 (420-465)||(27772223-27772268)
chr7 (420-465)||(47155094-47155139)
chr7 (498-550)||(11677173-11677225)
chr7 (345-400)||(28138760-28138815)
chr7 (18-69)||(41018307-41018358)
chr7 (18-68)||(4290553-4290603)
chr7 (354-400)||(23345077-23345123)
chr7 (322-400)||(26011952-26012030)
chr7 (18-72)||(34854771-34854825)
chr7 (18-72)||(38975813-38975867)
chr7 (420-465)||(22690026-22690071)
chr7 (79-128)||(27028746-27028795)
chr7 (84-129)||(38975881-38975926)
chr7 (84-129)||(48000711-48000756)
chr7 (420-472)||(6384870-6384922)
chr7 (63-128)||(22764753-22764820)
chr7 (344-400)||(41957587-41957643)
chr7 (423-474)||(29237550-29237601)
chr7 (427-474)||(40762204-40762251)
chr7 (424-474)||(2916119-2916169)
chr7 (420-474)||(18714465-18714519)
chr7 (425-463)||(22797931-22797969)
chr7 (436-474)||(37230034-37230072)
chr7 (75-129)||(45231917-45231971)
chr7 (34-120)||(10419484-10419572)
chr7 (421-474)||(15018022-15018074)
chr7 (420-461)||(23069847-23069888)
chr7 (421-474)||(24991798-24991851)
chr7 (423-472)||(28479850-28479898)
chr7 (22-79)||(41945924-41945981)
chr7 (36-72)||(4649346-4649382)
chr7 (421-465)||(9522938-9522982)
chr7 (511-555)||(18083561-18083605)
chr7 (33-77)||(44976351-44976395)
chr7 (428-464)||(47944468-47944504)
chr7 (428-464)||(47949898-47949934)
[»] chr5 (50 HSPs)
chr5 (18-141)||(29699372-29699497)
chr5 (18-119)||(16971171-16971274)
chr5 (19-119)||(3899866-3899968)
chr5 (18-129)||(19655175-19655288)
chr5 (18-119)||(28818944-28819047)
chr5 (18-129)||(291114-291227)
chr5 (36-131)||(3180086-3180183)
chr5 (498-632)||(39606549-39606681)
chr5 (18-96)||(2953240-2953320)
chr5 (18-127)||(30117836-30117947)
chr5 (18-119)||(2356301-2356401)
chr5 (18-128)||(12913821-12913933)
chr5 (36-119)||(16439165-16439250)
chr5 (36-125)||(19598353-19598443)
chr5 (18-93)||(2093945-2094022)
chr5 (484-538)||(22652747-22652801)
chr5 (18-71)||(291105-291158)
chr5 (19-119)||(26662426-26662529)
chr5 (19-119)||(26934021-26934124)
chr5 (327-401)||(7335533-7335607)
chr5 (18-72)||(19655166-19655220)
chr5 (421-474)||(22498959-22499011)
chr5 (24-72)||(29699381-29699429)
chr5 (42-114)||(38134405-38134479)
chr5 (18-72)||(16439146-16439200)
chr5 (18-72)||(30117904-30117958)
chr5 (420-474)||(42168935-42168989)
chr5 (421-474)||(5846046-5846099)
chr5 (420-465)||(31708136-31708181)
chr5 (420-473)||(36683460-36683513)
chr5 (421-465)||(1642360-1642404)
chr5 (421-461)||(31159459-31159499)
chr5 (421-472)||(3671237-3671288)
chr5 (18-72)||(1638465-1638519)
chr5 (420-474)||(6489024-6489078)
chr5 (428-474)||(15889428-15889474)
chr5 (18-72)||(19598340-19598394)
chr5 (484-518)||(22910821-22910855)
chr5 (420-474)||(33906517-33906571)
chr5 (420-474)||(42005122-42005176)
chr5 (84-129)||(2953266-2953311)
chr5 (420-465)||(6624802-6624847)
chr5 (433-474)||(11844441-11844482)
chr5 (37-119)||(16802471-16802555)
chr5 (420-465)||(32675284-32675328)
chr5 (36-72)||(3899865-3899901)
chr5 (422-474)||(11017193-11017245)
chr5 (36-72)||(16971170-16971206)
chr5 (422-474)||(17145340-17145392)
chr5 (423-463)||(27798652-27798692)
[»] chr2 (65 HSPs)
chr2 (484-641)||(30621946-30622103)
chr2 (484-641)||(30624567-30624724)
chr2 (484-632)||(24533830-24533976)
chr2 (505-641)||(30665271-30665407)
chr2 (475-641)||(28772213-28772379)
chr2 (18-119)||(6217232-6217335)
chr2 (484-641)||(24300842-24300999)
chr2 (18-119)||(38933614-38933717)
chr2 (18-129)||(16514441-16514554)
chr2 (484-641)||(30667699-30667856)
chr2 (37-141)||(15011285-15011391)
chr2 (18-129)||(29508698-29508812)
chr2 (20-119)||(29925580-29925681)
chr2 (18-118)||(14229361-14229462)
chr2 (18-108)||(14470600-14470692)
chr2 (18-103)||(37961749-37961836)
chr2 (18-127)||(6721970-6722081)
chr2 (36-119)||(2828611-2828696)
chr2 (18-72)||(29508767-29508821)
chr2 (18-81)||(32545855-32545918)
chr2 (420-474)||(18324884-18324938)
chr2 (420-474)||(28771599-28771653)
chr2 (37-128)||(37762028-37762121)
chr2 (18-71)||(9173058-9173111)
chr2 (420-472)||(24393264-24393316)
chr2 (484-560)||(34898820-34898896)
chr2 (420-474)||(2256988-2257042)
chr2 (420-474)||(10065490-10065544)
chr2 (18-72)||(16514432-16514486)
chr2 (420-474)||(18910523-18910577)
chr2 (420-474)||(27152370-27152424)
chr2 (420-474)||(32091161-32091215)
chr2 (420-474)||(34903534-34903588)
chr2 (432-474)||(35685063-35685105)
chr2 (420-473)||(2264815-2264868)
chr2 (84-129)||(6217241-6217286)
chr2 (84-129)||(14229370-14229415)
chr2 (428-465)||(29133482-29133519)
chr2 (38-119)||(2893990-2894073)
chr2 (77-129)||(9173050-9173102)
chr2 (435-474)||(6141237-6141276)
chr2 (18-81)||(14892327-14892390)
chr2 (18-73)||(33018620-33018675)
chr2 (420-474)||(11175802-11175856)
chr2 (424-474)||(12231894-12231944)
chr2 (420-474)||(15654860-15654913)
chr2 (428-470)||(18693660-18693702)
chr2 (423-465)||(20239369-20239411)
chr2 (429-475)||(22354942-22354988)
chr2 (18-125)||(24115941-24116050)
chr2 (420-474)||(24592836-24592890)
chr2 (420-474)||(24593393-24593447)
chr2 (420-474)||(25274819-25274873)
chr2 (420-465)||(20200731-20200776)
chr2 (420-465)||(30762485-30762530)
chr2 (84-129)||(33018621-33018666)
chr2 (424-460)||(2939777-2939813)
chr2 (420-472)||(12413512-12413564)
chr2 (420-472)||(12425572-12425624)
chr2 (433-465)||(12619370-12619402)
chr2 (24-72)||(15011294-15011342)
chr2 (430-474)||(25598562-25598606)
chr2 (313-405)||(37892998-37893090)
chr2 (420-472)||(39068698-39068750)
chr2 (424-472)||(39761457-39761504)
[»] chr4 (78 HSPs)
chr4 (484-615)||(11774187-11774317)
chr4 (18-139)||(47661849-47661972)
chr4 (19-129)||(51265462-51265574)
chr4 (18-129)||(6271719-6271832)
chr4 (18-129)||(23444277-23444390)
chr4 (18-119)||(42375037-42375140)
chr4 (484-563)||(13842385-13842464)
chr4 (18-119)||(53954637-53954740)
chr4 (36-118)||(26186042-26186124)
chr4 (36-119)||(47404611-47404696)
chr4 (484-612)||(21957387-21957517)
chr4 (18-72)||(6271710-6271764)
chr4 (18-129)||(35682183-35682296)
chr4 (37-120)||(55090023-55090108)
chr4 (34-119)||(40789206-40789293)
chr4 (18-72)||(3862622-3862676)
chr4 (18-72)||(3871379-3871433)
chr4 (18-72)||(23444345-23444399)
chr4 (18-72)||(30861850-30861904)
chr4 (18-72)||(51265453-51265507)
chr4 (61-119)||(30861825-30861885)
chr4 (18-128)||(44379948-44380060)
chr4 (22-128)||(47762626-47762734)
chr4 (484-579)||(6407053-6407146)
chr4 (36-96)||(50384131-50384193)
chr4 (420-474)||(11166703-11166757)
chr4 (36-119)||(52028576-52028661)
chr4 (81-129)||(3862619-3862667)
chr4 (81-129)||(3871376-3871424)
chr4 (24-72)||(47661856-47661904)
chr4 (420-475)||(51750024-51750079)
chr4 (420-466)||(3580739-3580785)
chr4 (420-474)||(11269711-11269765)
chr4 (420-474)||(19854582-19854636)
chr4 (424-474)||(24785456-24785506)
chr4 (424-474)||(24822760-24822810)
chr4 (420-470)||(47806246-47806296)
chr4 (420-474)||(56497598-56497652)
chr4 (421-466)||(9990291-9990336)
chr4 (420-465)||(11144655-11144700)
chr4 (36-81)||(24006096-24006141)
chr4 (420-465)||(56564973-56565018)
chr4 (422-474)||(30420859-30420911)
chr4 (36-119)||(31430487-31430569)
chr4 (18-58)||(35682174-35682214)
chr4 (421-472)||(7371539-7371590)
chr4 (420-471)||(14542750-14542801)
chr4 (24-96)||(25818387-25818461)
chr4 (424-471)||(42425634-42425681)
chr4 (420-467)||(54294412-54294459)
chr4 (428-474)||(8027395-8027441)
chr4 (428-474)||(21318251-21318297)
chr4 (420-474)||(33900714-33900768)
chr4 (322-384)||(38676956-38677018)
chr4 (420-474)||(46676488-46676542)
chr4 (420-474)||(49473662-49473716)
chr4 (420-474)||(49949351-49949404)
chr4 (420-474)||(56088063-56088117)
chr4 (420-465)||(3936653-3936698)
chr4 (429-474)||(23775535-23775580)
chr4 (420-465)||(27655757-27655801)
chr4 (420-465)||(38453291-38453336)
chr4 (355-400)||(38677694-38677739)
chr4 (424-465)||(41346782-41346822)
chr4 (84-129)||(42375086-42375131)
chr4 (420-465)||(48283317-48283362)
chr4 (430-471)||(49308840-49308881)
chr4 (84-129)||(53954686-53954731)
chr4 (423-463)||(626981-627021)
chr4 (18-58)||(5048890-5048930)
chr4 (423-471)||(6474459-6474507)
chr4 (424-460)||(19486703-19486739)
chr4 (420-472)||(29808258-29808310)
chr4 (18-58)||(30709990-30710030)
chr4 (18-70)||(44379938-44379990)
chr4 (430-474)||(50656615-50656659)
chr4 (421-465)||(54877590-54877634)
chr4 (84-120)||(55090022-55090058)
[»] chr1 (78 HSPs)
chr1 (484-641)||(21199791-21199946)
chr1 (18-129)||(29179605-29179718)
chr1 (18-129)||(48993925-48994038)
chr1 (18-132)||(5995383-5995499)
chr1 (18-119)||(49444921-49445022)
chr1 (18-127)||(32540756-32540867)
chr1 (36-132)||(37155060-37155158)
chr1 (18-129)||(17127572-17127685)
chr1 (36-129)||(44706809-44706905)
chr1 (18-119)||(15220838-15220941)
chr1 (34-129)||(48498432-48498529)
chr1 (36-132)||(19711206-19711302)
chr1 (36-119)||(38674531-38674614)
chr1 (36-119)||(741528-741613)
chr1 (18-119)||(29371395-29371498)
chr1 (18-118)||(33219601-33219703)
chr1 (38-118)||(46333974-46334056)
chr1 (18-72)||(29179673-29179727)
chr1 (36-119)||(34062236-34062321)
chr1 (34-119)||(5694914-5695000)
chr1 (34-119)||(8337875-8337962)
chr1 (484-555)||(20406053-20406125)
chr1 (420-474)||(17283968-17284022)
chr1 (420-474)||(35473969-35474023)
chr1 (18-72)||(44706860-44706914)
chr1 (18-72)||(46932005-46932059)
chr1 (18-72)||(48993993-48994047)
chr1 (36-129)||(4609013-4609108)
chr1 (511-555)||(23600841-23600885)
chr1 (18-57)||(2573236-2573275)
chr1 (420-471)||(5907819-5907870)
chr1 (36-120)||(48604973-48605059)
chr1 (420-474)||(8210375-8210429)
chr1 (420-474)||(10132434-10132488)
chr1 (75-129)||(21630059-21630113)
chr1 (18-72)||(37155054-37155108)
chr1 (420-474)||(38448856-38448910)
chr1 (420-474)||(50638906-50638960)
chr1 (75-128)||(28395655-28395708)
chr1 (482-555)||(30821240-30821313)
chr1 (420-465)||(37045136-37045181)
chr1 (61-129)||(9157327-9157397)
chr1 (34-81)||(28928803-28928850)
chr1 (421-472)||(30937494-30937545)
chr1 (82-129)||(46932014-46932061)
chr1 (18-72)||(1091620-1091674)
chr1 (420-474)||(3136678-3136732)
chr1 (420-466)||(3481586-3481632)
chr1 (18-72)||(5995377-5995431)
chr1 (18-72)||(9157318-9157372)
chr1 (420-474)||(9639807-9639861)
chr1 (423-465)||(11681249-11681291)
chr1 (22-72)||(21630054-21630104)
chr1 (420-474)||(21638130-21638184)
chr1 (18-72)||(28395645-28395699)
chr1 (18-72)||(32540824-32540878)
chr1 (420-474)||(41973272-41973326)
chr1 (424-474)||(45481510-45481560)
chr1 (18-72)||(45728295-45728349)
chr1 (420-474)||(47528437-47528491)
chr1 (18-72)||(48498423-48498477)
chr1 (420-474)||(51503696-51503750)
chr1 (421-474)||(13615603-13615656)
chr1 (84-129)||(17127581-17127626)
chr1 (484-580)||(18623935-18624028)
chr1 (433-474)||(24631856-24631897)
chr1 (420-465)||(26256079-26256124)
chr1 (421-474)||(45418054-45418107)
chr1 (39-129)||(45728304-45728396)
chr1 (48-129)||(1091582-1091665)
chr1 (354-398)||(9862923-9862967)
chr1 (424-464)||(11354012-11354052)
chr1 (430-474)||(21400023-21400067)
chr1 (428-472)||(23405356-23405400)
chr1 (426-474)||(28039856-28039904)
chr1 (430-474)||(30561740-30561784)
chr1 (430-474)||(37944130-37944174)
chr1 (36-72)||(49444987-49445023)
[»] scaffold0508 (1 HSPs)
scaffold0508 (486-632)||(5392-5537)
[»] chr3 (78 HSPs)
chr3 (497-641)||(10835811-10835951)
chr3 (18-129)||(41752981-41753094)
chr3 (18-119)||(1801454-1801557)
chr3 (18-127)||(51046081-51046192)
chr3 (24-129)||(47492061-47492168)
chr3 (36-119)||(30476500-30476585)
chr3 (18-129)||(30580764-30580877)
chr3 (484-564)||(16279758-16279837)
chr3 (36-129)||(33689193-33689288)
chr3 (36-129)||(43139735-43139830)
chr3 (498-556)||(10929173-10929231)
chr3 (497-613)||(13437941-13438056)
chr3 (18-129)||(30734410-30734523)
chr3 (484-604)||(8875179-8875298)
chr3 (420-474)||(1149059-1149113)
chr3 (36-119)||(29031740-29031825)
chr3 (34-119)||(47677279-47677366)
chr3 (18-72)||(41752972-41753026)
chr3 (18-72)||(43139785-43139839)
chr3 (482-555)||(16308416-16308488)
chr3 (422-474)||(35191809-35191861)
chr3 (66-129)||(39057015-39057078)
chr3 (18-81)||(45103117-45103180)
chr3 (18-118)||(50524730-50524832)
chr3 (423-474)||(54230092-54230143)
chr3 (568-641)||(10932511-10932585)
chr3 (38-129)||(18321668-18321761)
chr3 (420-474)||(27143063-27143117)
chr3 (420-474)||(27397602-27397656)
chr3 (420-474)||(28130924-28130978)
chr3 (18-72)||(51046149-51046203)
chr3 (420-474)||(51882190-51882244)
chr3 (84-129)||(1801463-1801508)
chr3 (482-555)||(16307345-16307417)
chr3 (433-474)||(17588379-17588420)
chr3 (420-473)||(25505692-25505744)
chr3 (420-465)||(38573563-38573608)
chr3 (18-58)||(18321659-18321699)
chr3 (84-128)||(41753040-41753084)
chr3 (420-472)||(45096045-45096097)
chr3 (300-400)||(50663876-50663976)
chr3 (484-538)||(3295600-3295655)
chr3 (428-463)||(6835849-6835884)
chr3 (420-471)||(14149536-14149587)
chr3 (475-538)||(21662398-21662461)
chr3 (421-472)||(30200845-30200896)
chr3 (25-72)||(50549990-50550037)
chr3 (37-129)||(55223249-55223343)
chr3 (420-474)||(8113552-8113606)
chr3 (420-474)||(13800684-13800738)
chr3 (29-83)||(21024113-21024167)
chr3 (420-474)||(25441490-25441544)
chr3 (420-466)||(25730427-25730473)
chr3 (420-474)||(25902797-25902851)
chr3 (424-474)||(35126263-35126313)
chr3 (18-72)||(47492123-47492177)
chr3 (420-474)||(53207987-53208041)
chr3 (420-474)||(53996316-53996370)
chr3 (420-465)||(2453839-2453884)
chr3 (421-474)||(10594694-10594747)
chr3 (475-555)||(12800847-12800928)
chr3 (421-474)||(14741811-14741864)
chr3 (420-465)||(14771357-14771402)
chr3 (420-465)||(16792964-16793009)
chr3 (429-474)||(21914070-21914115)
chr3 (420-461)||(29394201-29394242)
chr3 (84-129)||(47492064-47492109)
chr3 (421-474)||(52119393-52119446)
chr3 (79-119)||(1801566-1801606)
chr3 (423-463)||(2390353-2390393)
chr3 (420-472)||(4216390-4216441)
chr3 (429-465)||(13829076-13829112)
chr3 (430-474)||(13992688-13992732)
chr3 (18-58)||(30734492-30734532)
chr3 (436-468)||(39216374-39216406)
chr3 (75-119)||(49418758-49418802)
chr3 (36-129)||(50549992-50550087)
chr3 (422-474)||(53681869-53681921)
[»] scaffold0914 (1 HSPs)
scaffold0914 (484-641)||(565-721)
[»] chr8 (52 HSPs)
chr8 (19-129)||(35440978-35441090)
chr8 (18-129)||(5033178-5033291)
chr8 (18-129)||(10086774-10086887)
chr8 (140-209)||(40525088-40525157)
chr8 (18-129)||(8796439-8796552)
chr8 (484-641)||(24621972-24622131)
chr8 (18-129)||(33841599-33841712)
chr8 (37-129)||(8243415-8243509)
chr8 (18-127)||(43844479-43844588)
chr8 (18-127)||(5667116-5667227)
chr8 (485-564)||(24622143-24622222)
chr8 (22-119)||(39850982-39851081)
chr8 (484-615)||(22883022-22883156)
chr8 (484-609)||(23637707-23637833)
chr8 (36-129)||(34229658-34229753)
chr8 (36-101)||(34541829-34541896)
chr8 (27-81)||(31159918-31159972)
chr8 (18-72)||(35441045-35441099)
chr8 (484-606)||(9893897-9894021)
chr8 (420-474)||(1244695-1244749)
chr8 (18-72)||(5033169-5033223)
chr8 (18-72)||(33841667-33841721)
chr8 (76-129)||(2581842-2581895)
chr8 (18-119)||(6296632-6296735)
chr8 (18-95)||(45191135-45191214)
chr8 (423-474)||(30623310-30623361)
chr8 (18-72)||(2581833-2581887)
chr8 (18-72)||(8243464-8243518)
chr8 (18-72)||(22649853-22649907)
chr8 (18-72)||(45191203-45191257)
chr8 (421-474)||(9067099-9067152)
chr8 (484-580)||(18832084-18832177)
chr8 (424-472)||(8146150-8146198)
chr8 (484-564)||(17625353-17625432)
chr8 (18-118)||(4958627-4958728)
chr8 (431-466)||(36122548-36122583)
chr8 (420-474)||(8881292-8881346)
chr8 (354-400)||(14087875-14087921)
chr8 (420-474)||(19488317-19488371)
chr8 (420-458)||(36059351-36059389)
chr8 (420-458)||(42844239-42844277)
chr8 (18-71)||(5667105-5667158)
chr8 (83-128)||(22649863-22649908)
chr8 (484-580)||(24382058-24382151)
chr8 (428-465)||(31336805-31336842)
chr8 (420-465)||(38763505-38763550)
chr8 (84-132)||(5667173-5667221)
chr8 (84-120)||(8243414-8243450)
chr8 (484-564)||(20503421-20503500)
chr8 (484-579)||(23637013-23637105)
chr8 (420-464)||(30176409-30176453)
chr8 (429-465)||(41625220-41625256)
[»] chr6 (29 HSPs)
chr6 (18-119)||(12343127-12343230)
chr6 (18-127)||(17750921-17751032)
chr6 (36-119)||(551191-551276)
chr6 (34-120)||(10521873-10521961)
chr6 (18-131)||(13043472-13043587)
chr6 (61-129)||(24587478-24587548)
chr6 (18-108)||(24618609-24618701)
chr6 (484-564)||(10970903-10970982)
chr6 (18-72)||(551241-551295)
chr6 (430-465)||(6610103-6610138)
chr6 (484-555)||(19992348-19992418)
chr6 (18-73)||(24975760-24975815)
chr6 (84-127)||(24975771-24975814)
chr6 (486-579)||(12974513-12974604)
chr6 (484-613)||(13191759-13191891)
chr6 (420-465)||(12700411-12700456)
chr6 (420-473)||(26181705-26181758)
chr6 (75-119)||(31654332-31654376)
chr6 (345-400)||(14153355-14153410)
chr6 (420-474)||(2726407-2726461)
chr6 (420-474)||(7082982-7083036)
chr6 (18-72)||(24587469-24587523)
chr6 (429-467)||(33930519-33930557)
chr6 (420-458)||(34247831-34247869)
chr6 (420-465)||(12000-12045)
chr6 (351-400)||(24326945-24326994)
chr6 (420-465)||(28592677-28592722)
chr6 (429-465)||(12808895-12808931)
chr6 (421-465)||(34474253-34474297)
[»] scaffold0586 (2 HSPs)
scaffold0586 (18-131)||(7055-7170)
scaffold0586 (18-72)||(7123-7176)
[»] scaffold0016 (2 HSPs)
scaffold0016 (18-119)||(49711-49814)
scaffold0016 (36-72)||(49779-49815)
[»] scaffold0018 (1 HSPs)
scaffold0018 (482-562)||(49964-50045)
[»] scaffold0161 (2 HSPs)
scaffold0161 (18-129)||(27228-27341)
scaffold0161 (18-69)||(27299-27350)
[»] scaffold0118 (2 HSPs)
scaffold0118 (484-613)||(17675-17807)
scaffold0118 (484-555)||(15819-15890)
[»] scaffold0047 (1 HSPs)
scaffold0047 (36-119)||(63784-63869)
[»] scaffold0213 (1 HSPs)
scaffold0213 (484-560)||(26388-26463)
[»] scaffold0282 (1 HSPs)
scaffold0282 (506-559)||(21495-21548)
[»] scaffold0238 (1 HSPs)
scaffold0238 (420-474)||(25406-25460)
[»] scaffold0068 (2 HSPs)
scaffold0068 (484-613)||(49618-49750)
scaffold0068 (484-613)||(63066-63198)
[»] scaffold0112 (1 HSPs)
scaffold0112 (484-606)||(18432-18558)
[»] scaffold0615 (1 HSPs)
scaffold0615 (484-560)||(4614-4689)
[»] scaffold0064 (1 HSPs)
scaffold0064 (475-563)||(6533-6620)
[»] scaffold0536 (1 HSPs)
scaffold0536 (27-129)||(4909-5010)
[»] scaffold0043 (1 HSPs)
scaffold0043 (484-563)||(15200-15278)
[»] scaffold0126 (1 HSPs)
scaffold0126 (432-474)||(34890-34932)
[»] scaffold0117 (1 HSPs)
scaffold0117 (420-474)||(18310-18364)
[»] scaffold0026 (1 HSPs)
scaffold0026 (420-474)||(75342-75396)
[»] scaffold0533 (1 HSPs)
scaffold0533 (422-474)||(8842-8895)
[»] scaffold0445 (1 HSPs)
scaffold0445 (420-465)||(4496-4541)
[»] scaffold0066 (1 HSPs)
scaffold0066 (420-465)||(17530-17575)
[»] scaffold0674 (1 HSPs)
scaffold0674 (421-465)||(6740-6784)


Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 258 - 641
Target Start/End: Complemental strand, 26009512 - 26009126
Alignment:
Q  258 aactagcgtgagctaagttatgcggcggcgcagaaaatatagctagcgtgagttgactcacgctacgttagttaacatgtatagaaatatttttgtcatt 357  Q
    |||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||| ||||||    
T  26009512 aactagcgtgagttaagttacgcgacagcgcagaaaatatagctagcgtgagttgactcacgctacgtgagttaacatgcgtaggaatattttggtcatt 26009413  T
Q  358 tattttgggaatgagcaaaatcgtttgagtaaatagcagaatttaaaaactaacnnnnnnnn---gtggtgtccggggttcgaaccctagatcttgcata 454  Q
    || |||||||||||||||||||||||| ||||| |||||||||  |||||||||           ||||||||||| |||||||||| ||| ||||||||    
T  26009412 tactttgggaatgagcaaaatcgtttgggtaaagagcagaattcgaaaactaactctttttttttgtggtgtccggagttcgaaccccagaccttgcata 26009313  T
Q  455 tattatgcattttccttaccgtaacttcataaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaata 554  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  26009312 tattatgcattttccttactgtaacttcataaactctaaaagcgataaattacgttaatgatacaatcatataaagaatttagatgttgcttcttcaata 26009213  T
Q  555 attcaccaaaagcatgtataaataattatctcaacatcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26009212 attcaccaaaagcatgtataaataattatctcaacatcgcagcggaataaaaacatcattacattgacaattaaataattcatctca 26009126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 26011616 - 26011494
Alignment:
Q  142 caaatcacatatccttattatacatatccactttttatatgttcttatttagcctcaaatcacatatctacttttttatatttt-agattagttatatat 240  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26011616 caaatcacatatccttattatacatatccattttttatatgttcttatttagcctcaaatcacatatctacttttttatattttaagattagttatatat 26011517  T
Q  241 ccattgttgaagtttttaactag 263  Q
    |||||||||||||||||||||||    
T  26011516 ccattgttgaagtttttaactag 26011494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 484 - 641
Target Start/End: Complemental strand, 20914022 - 20913865
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    ||||||||||||  ||||||||||  |||||||| || ||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||| |    
T  20914022 taaactctaaaagtgataaattacagtaatgatataaccatataaagaatttagatgttacttcttcaataattcacc--aagcatgtataaataatttt 20913925  T
Q  584 ctc--aacatcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    |||  ||||||||| ||||||||||||||||||||||||||| |||| ||| ||| ||||    
T  20913924 ctccaaacatcgcaacggaataaaaacatcattacatcgacatttaactaaatcacctca 20913865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 484 - 641
Target Start/End: Complemental strand, 26150685 - 26150530
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||||||||| | ||| |||||||||||| |||||  ||||||| || |||||||      
T  26150685 taaactttaaaagcgataaattacgctaatgatacaaccatataaagaatttatatgttacttcttcaataaatcacc--aagcatgcat-aataatttc 26150589  T
Q  584 ctc-aacatcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
     || |||||||||| |||| ||||||||||||||||||||| |||||||| ||||||||    
T  26150588 ttcaaacatcgcagtggaacaaaaacatcattacatcgacatttaaataaatcatctca 26150530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 11016999 - 11016886
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||| ||||||| ||||  |||||| ||||||||||||||  |||||||||||||||||||||| |||| ||||||    
T  11016999 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 11016900  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  11016899 tcaccaatgtcacc 11016886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 34854719 - 34854816
Alignment:
Q  34 ttggtgacattggccaatcataatgctacaatgcttgtgaaagaga--gaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  34854719 ttggtgacattggccaatcacaatgccacaatgcttgtgaaagagatagaaacacaaacattgtggcattgtgattgaccaatgtcaccaatgtcacc 34854816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 38975935 - 38975822
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||| ||||| |||||||||||||  |||| ||||||| |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  38975935 atagagttaggtgacattggtgacattgatcaattataatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatg 38975836  T
Q  116 tcactaatgtcacc 129  Q
    | || |||||||||    
T  38975835 ttaccaatgtcacc 38975822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 484 - 632
Target Start/End: Complemental strand, 15815929 - 15815782
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||||||| | |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||  ||||||| |||||||||| |    
T  15815929 taaactctaaaagcaataaattacgctaaagatacaatcatataaagaatttagatgttacttcttcaataaatcacc--aagcatgcataaataatttt 15815832  T
Q  584 ct--caacatcgcagcggaataaaaacatcattacatcgacaattaaataa 632  Q
     |   |||||||||| ||||| ||||||||||||| |||||| | ||||||    
T  15815831 tttcaaacatcgcagtggaat-aaaacatcattacttcgacattcaaataa 15815782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 484 - 641
Target Start/End: Complemental strand, 868326 - 868170
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||||||||||| ||| |||||||||||||||| || |  |||| |||   |||| |    
T  868326 taaactctaaaagcgataacttacgcaaatgatacaatcatataaagaatttagatgttacttcttcaataattcatcaga--catgcatactaaatttt 868229  T
Q  584 ctc-aacatcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    ||| ||||||||||||| |||| |||||||||||||| | | ||||||||  |||||||    
T  868228 ctcaaacatcgcagcgggataataacatcattacatcaatatttaaataaaacatctca 868170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 484 - 641
Target Start/End: Complemental strand, 1229603 - 1229447
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||||||||||| ||| |||||||||||||||| || |  |||| |||   |||| |    
T  1229603 taaactctaaaagcgataacttacgcaaatgatacaatcatataaagaatttagatgttacttcttcaataattcatcaga--catgcatactaaatttt 1229506  T
Q  584 ctc-aacatcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    ||| ||||||||||||| |||| |||||||||||||| | | ||||||||  |||||||    
T  1229505 ctcaaacatcgcagcgggataataacatcattacatcaatatttaaataaaacatctca 1229447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 4290671 - 4290562
Alignment:
Q  22 agttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||| ||||||||||||||||||||| ||||  ||||| |||||||||||  ||||||||| |||||||||||||||| |||||||||| ||||    
T  4290671 agttgggtgacattggtgacattggccaatcacaatgtcacaattcttgtgaaagagagagaaacacgagcattgtggcattgtgattgaccaatatcac 4290572  T
Q  120 taatgtcacc 129  Q
     ||| |||||    
T  4290571 caatatcacc 4290562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 29053338 - 29053425
Alignment:
Q  34 ttggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||||||||||||| |||||  |||||||||||||  |||||||||||||| |||||||||||||| |||| ||||||||||    
T  29053338 ttggtgacattggccaatcacaatgcctcaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcac 29053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 42628425 - 42628322
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| |||||||| |||||||||||| ||||   ||||||||||||||||  |||||||| ||||||||||||||||| ||||  |||||    
T  42628425 atagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatg 42628326  T
Q  116 tcac 119  Q
    ||||    
T  42628325 tcac 42628322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 48000867 - 48000769
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaat 114  Q
    |||||||||||||| ||||||||||||| ||||||| ||||| ||||||  |||||||||  ||||||||||| |||||||||||||| |||| |||||    
T  48000867 atagagttgggtgacattggtgacattgaccaatcacaatgccacaatgtctgtgaaagagagagaaacacaaacattgtggcattgtgattggccaat 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 7671937 - 7672022
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||||| |||||||| ||||| ||||||||||||||  |||||||||||||| |||||||||||||| |||| ||||||||||    
T  7671937 ggtgacattagccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcac 7672022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 41018254 - 41018349
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||||||||||| ||||   |||||||||||||||||  ||||||| ||||||||||||||||| ||||  ||||||||| |||||||||    
T  41018254 ggtgacattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatgtcaccaatgtcacc 41018349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 15027657 - 15027561
Alignment:
Q  33 attggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtca 127  Q
    ||||||||||||| ||||||| ||||  |||||||||||||||||  ||||||||||| |||||||| ||||| ||||  ||||||||| |||||||    
T  15027657 attggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggtattgtgattggtcaatgtcaccaatgtca 15027561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 4649436 - 4649347
Alignment:
Q  34 ttggtgacattggccaatcataatgctacaatgcttgtgaaagagaga----aacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||||||||| |||||| ||||  || ||||||||||||||||||    |||||||||||||| ||||||| |||||||||||||||    
T  4649436 ttggtgacattggtcaatcacaatgtcacgatgcttgtgaaagagagagagaaacacaagcattgtagcattgtgattgaccaatgtcac 4649347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 11016877 - 11016931
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  11016877 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 11016931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 538
Target Start/End: Complemental strand, 16463823 - 16463774
Alignment:
Q  489 tctaaaaacgataaattacgctaatgatacaatcatataaagaatttaga 538  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  16463823 tctaaaagcgataaattacgctaacgatacaatcatataaagaatttaga 16463774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 48000705 - 48000765
Alignment:
Q  21 gagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga 81  Q
    ||||||||||| |||||||||||||  |||||| ||||| |||||||||||||||||||||    
T  48000705 gagttgggtgacattggtgacattgatcaatcacaatgccacaatgcttgtgaaagagaga 48000765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 45231980 - 45231929
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgctt 69  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  45231980 atagagttgggtgacattggtgacattggccaatcacaatgttacaatgctt 45231929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 7872738 - 7872792
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||||    
T  7872738 gtggtgtcctgggttcgaaccccagaccttgcatatattatgcattgtccttacc 7872792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 27028823 - 27028904
Alignment:
Q  40 acattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||| |||||| ||||  ||||||||| ||||||||  |||||||||| ||||||| |||||| |||||||||||||||    
T  27028823 acattggacaatcacaatgtcacaatgcttctgaaagagagagaaacacaaacattgtgacattgtgattgaccaatgtcac 27028904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 46987157 - 46987103
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||||||||||||||  || ||||||||||||||||||| ||||||||    
T  46987157 gtggtgtccggggttcgaaccccggaccttgcatatattatgcattgtccttacc 46987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 27772223 - 27772268
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  27772223 gtggtgtccagggttcgaatcctagatcttgcatatattatgcatt 27772268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 47155094 - 47155139
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||||||||||||||||||| || |||||||||||||||||||    
T  47155094 gtggtgtccggggttcgaaccctggaccttgcatatattatgcatt 47155139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 550
Target Start/End: Original strand, 11677173 - 11677225
Alignment:
Q  498 gataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttc 550  Q
    |||||||||||  |||||||||||||||||||||||||||| ||| |||||||    
T  11677173 gataaattacgtaaatgatacaatcatataaagaatttagatgttacttcttc 11677225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 28138815 - 28138760
Alignment:
Q  345 tatttttgtcatttattttgggaatgagcaaaatcgtttgagtaaatagcagaatt 400  Q
    |||||| |||||||| ||||||||||||||||||| |||| ||||| |||||||||    
T  28138815 tattttggtcatttactttgggaatgagcaaaatcatttgggtaaagagcagaatt 28138760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 41018358 - 41018307
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgctt 69  Q
    |||||||||||||| ||||||||||||| ||||||| ||||| |||||||||    
T  41018358 atagagttgggtgacattggtgacattgaccaatcacaatgccacaatgctt 41018307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 4290553 - 4290603
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgct 68  Q
    ||||||||||||||||||||||| ||||| |||||| ||||| ||||||||    
T  4290553 atagagttgggtgatattggtgatattggtcaatcacaatgccacaatgct 4290603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 400
Target Start/End: Original strand, 23345077 - 23345123
Alignment:
Q  354 catttattttgggaatgagcaaaatcgtttgagtaaatagcagaatt 400  Q
    ||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  23345077 catttattttgggaatgagcaaaatcgtttgggtaaagagcataatt 23345123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 400
Target Start/End: Original strand, 26011952 - 26012030
Alignment:
Q  322 acgttagttaacatgtatagaaatatttttgtcatttattttgggaatgagcaaaatcgtttgagtaaatagcagaatt 400  Q
    |||| |||||||||| |||||  |||||| |||||||| |||| ||||||  ||||||||||| ||||| |||||||||    
T  26011952 acgtaagttaacatgcatagaggtattttggtcatttactttgagaatgattaaaatcgtttgggtaaagagcagaatt 26012030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 34854825 - 34854771
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| |||||||||||||| |||||| ||||| |||||| |||||    
T  34854825 atagagttgggtgacattggtgacattggtcaatcacaatgccacaatgtttgtg 34854771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 38975813 - 38975867
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| |||||| ||||||| |||||| ||||| ||||||||||||    
T  38975813 atagagttgggtgacattggtaacattggtcaatcacaatgccacaatgcttgtg 38975867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 22690026 - 22690071
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||||||||||||||||| | | |||||||||||||||||||    
T  22690026 gtggtgtccggggttcgaaccccaaaccttgcatatattatgcatt 22690071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 27028795 - 27028746
Alignment:
Q  79 agaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcac 128  Q
    |||||||||||||||||| |||||| |||| |||||||||| ||||||||    
T  27028795 agaaacacaagcattgtgacattgtgattgtccaatgtcaccaatgtcac 27028746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 38975881 - 38975926
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||    
T  38975881 cacaagcattgtggcattataattgatcaatgtcaccaatgtcacc 38975926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 48000756 - 48000711
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||    
T  48000756 cacaagcattgtggcattgtgattgatcaatgtcaccaatgtcacc 48000711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 6384922 - 6384870
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    ||||||||  |||||||||||| ||| ||||||||||||||||||| ||||||    
T  6384922 gtggtgtctagggttcgaaccccagaccttgcatatattatgcattgtcctta 6384870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 22764753 - 22764820
Alignment:
Q  63 aatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcac 128  Q
    ||||||||||||||||  |||||||||| ||||||| |||||| |||| ||||| |||| ||||||||    
T  22764753 aatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatatcaccaatgtcac 22764820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 41957587 - 41957643
Alignment:
Q  344 atatttttgtcatttattttgggaatgagcaaaatcgtttgagtaaatagcagaatt 400  Q
    ||||||| |||||||| ||||||||||| |||||||||||| ||||| |||| ||||    
T  41957587 atattttggtcatttactttgggaatgatcaaaatcgtttgggtaaagagcaaaatt 41957643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 474
Target Start/End: Original strand, 29237550 - 29237601
Alignment:
Q  423 gtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||| |||||||||||| || ||||||||||||||||||| | ||||||    
T  29237550 gtgtccgaggttcgaaccctggaccttgcatatattatgcattgttcttacc 29237601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 474
Target Start/End: Original strand, 40762204 - 40762251
Alignment:
Q  427 ccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||| |||||||||||| | ||||||||||||||||||| ||||||||    
T  40762204 ccggagttcgaaccctataccttgcatatattatgcattgtccttacc 40762251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 474
Target Start/End: Complemental strand, 2916169 - 2916119
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||||||| || ||| ||||||||||||||||||| ||| ||||    
T  2916169 tgtccggggttcgaatcccagaccttgcatatattatgcattgtccgtacc 2916119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 18714519 - 18714465
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||| ||||||| ||||||  || ||||||||||||||||||| ||||||||    
T  18714519 gtggtgtacggggtttgaaccccggaccttgcatatattatgcattgtccttacc 18714465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 463
Target Start/End: Complemental strand, 22797969 - 22797931
Alignment:
Q  425 gtccggggttcgaaccctagatcttgcatatattatgca 463  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  22797969 gtccggggttcgaaccctagaccttgcatatataatgca 22797931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 436 - 474
Target Start/End: Original strand, 37230034 - 37230072
Alignment:
Q  436 gaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  37230034 gaaccccagaccttgcatatattatgcattttccttacc 37230072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 45231917 - 45231971
Alignment:
Q  75 agagagaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||| |||||||||  |||||| |||| |||||||||| |||||||||    
T  45231917 agagagaaacaaaagcattgtaacattgtgattggccaatgtcaccaatgtcacc 45231971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 10419572 - 10419484
Alignment:
Q  34 ttggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcact 120  Q
    ||||||||||||||  |||| ||||  ||||  |||||||||||||||  |||||||| |||||  |||| | ||||||||||||||||    
T  10419572 ttggtgacattggctgatcacaatgtcacaaaacttgtgaaagagagagaaacacaagtattgtaacattatgattgaccaatgtcact 10419484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 15018074 - 15018022
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||| | ||||||    
T  15018074 tggtgtccagggttcgaacc-tagatcttgcatatattattcattattcttacc 15018022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 23069847 - 23069888
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatg 461  Q
    |||||||||||||||||||||| | | |||||||||||||||    
T  23069847 gtggtgtccggggttcgaaccccataccttgcatatattatg 23069888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 24991851 - 24991798
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||| ||||||| ||   ||||||||||||||||||||| ||||||||    
T  24991851 tggtgtccggagttcgaatcccgtatcttgcatatattatgcattgtccttacc 24991798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 472
Target Start/End: Original strand, 28479850 - 28479898
Alignment:
Q  423 gtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    ||||||||| ||||||||| |||||||| |||||||||||||| ||||||    
T  28479850 gtgtccgggcttcgaaccc-agatcttgtatatattatgcattgtcctta 28479898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 41945981 - 41945924
Alignment:
Q  22 agttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagaga 79  Q
    ||||| |||| |||||| | ||||| |||||| |||| ||||||||||||||||||||    
T  41945981 agttgagtgacattggtaatattggtcaatcacaatgttacaatgcttgtgaaagaga 41945924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 4649346 - 4649382
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  4649346 ggtgacattggtcaatcacaatgctacaatgcttgtg 4649382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 9522982 - 9522938
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||| ||||||||||||||| | | |||||||||||||||||||    
T  9522982 tggtggccggggttcgaaccccaaaccttgcatatattatgcatt 9522938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 18083605 - 18083561
Alignment:
Q  511 aatgatacaatcatataaagaatttagacgttgcttcttcaataa 555  Q
    |||||||||||||||||||||||||||| ||  | ||||||||||    
T  18083605 aatgatacaatcatataaagaatttagatgtcacatcttcaataa 18083561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 44976351 - 44976395
Alignment:
Q  33 attggtgacattggccaatcataatgctacaatgcttgtgaaaga 77  Q
    |||||||||||||||||||||| ||| |||||| ||| |||||||    
T  44976351 attggtgacattggccaatcatcatgttacaatccttatgaaaga 44976395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 428 - 464
Target Start/End: Complemental strand, 47944504 - 47944468
Alignment:
Q  428 cggggttcgaaccctagatcttgcatatattatgcat 464  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  47944504 cggggttcgaaccccagatcatgcatatattatgcat 47944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 428 - 464
Target Start/End: Complemental strand, 47949934 - 47949898
Alignment:
Q  428 cggggttcgaaccctagatcttgcatatattatgcat 464  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  47949934 cggggttcgaaccccagatcatgcatatattatgcat 47949898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 2e-41; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 29699497 - 29699372
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||    
T  29699497 atagagttgggtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 29699398  T
Q  116 tcactaatgtcaccaaagtattttcc 141  Q
    |||| ||||||||| |||||||||||    
T  29699397 tcaccaatgtcacccaagtattttcc 29699372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 16971274 - 16971171
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||| ||||||| ||||  |||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||    
T  16971274 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 16971175  T
Q  116 tcac 119  Q
    ||||    
T  16971174 tcac 16971171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 3899968 - 3899866
Alignment:
Q  19 tagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatgt 116  Q
    ||||||||||||| ||||||||||||| ||||||| ||||  |||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  3899968 tagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgt 3899869  T
Q  117 cac 119  Q
    |||    
T  3899868 cac 3899866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 19655288 - 19655175
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    ||||||||| |||| ||||||||||||| ||||||| ||||  |||||||||||||||||  ||||||||||| |||||||||||||| |||| ||||||    
T  19655288 atagagttgagtgacattggtgacattgtccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatg 19655189  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  19655188 tcaccaatgtcacc 19655175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 28819047 - 28818944
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    ||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||||||  |||||| ||||| |||||| |||||| |||||||||||    
T  28819047 atagagttgagtgatattggtgacattggtcaatcataatgtcacaatgcttgtgaaagagagagaaatacaagtattgtgacattgtgattgaccaatg 28818948  T
Q  116 tcac 119  Q
    ||||    
T  28818947 tcac 28818944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 291227 - 291114
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagaga--gaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| |||||||||||||  |||||| ||||  |||||| ||||||||||||  |||| ||||||||||||||||||| |||| ||||||    
T  291227 atagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagaaagaaatacaagcattgtggcattgtgattggccaatg 291128  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  291127 tcaccaatgtcacc 291114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 3180086 - 3180183
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcaccaa 131  Q
    ||||||||||  |||||||||||  |||||| |||||||||||  ||||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  3180086 ggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgtcaccaatgttaccaa 3180183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 498 - 632
Target Start/End: Original strand, 39606549 - 39606681
Alignment:
Q  498 gataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattatctc--aacatcgca 595  Q
    ||||||||||||||||||||| ||||||| |||||| |||| ||| |||||||||||| |||||  ||||||| || || |||| ||||  |||||||||    
T  39606549 gataaattacgctaatgatacgatcatatcaagaatctagatgttacttcttcaataaatcacc--aagcatgcatgaacaatt-tctcaaaacatcgca 39606645  T
Q  596 gcggaataaaaacatcattacatcgacaattaaataa 632  Q
    ||||||| ||||||||||||||||||||  |||||||    
T  39606646 gcggaat-aaaacatcattacatcgacacctaaataa 39606681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 2953320 - 2953240
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtg 96  Q
    |||||||||||||| ||||||||||||||||||||| ||||  |||||||||||||||||  |||||||||||||||||||    
T  2953320 atagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 2953240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 30117836 - 30117947
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaa--gagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| |||||||| |||| ||||||| ||||  |||||| || |||||  |||||||||||||||||||||||||| | ||||||||||     
T  30117836 atagagttgggtgacattggtgatattgaccaatcacaatgtcacaatgtttatgaaaaagagagaaacacaagcattgtggcattatgattgaccaata 30117935  T
Q  116 tcactaatgtca 127  Q
    |||| |||||||    
T  30117936 tcaccaatgtca 30117947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 2356401 - 2356301
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagagaaacacaagcattgtggcattgtaattgaccaatgtc 117  Q
    |||||||||| ||| ||||||||||||||||||||| | ||  ||||||||| ||||||||||||||||||||||| |  ||||||||||| | ||||||    
T  2356401 atagagttggatgacattggtgacattggccaatcaca-tgtcacaatgcttatgaaagagagaaacacaagcattataacattgtaattgcctaatgtc 2356303  T
Q  118 ac 119  Q
    ||    
T  2356302 ac 2356301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 12913933 - 12913821
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| |||||||| ||||| |||||| ||||  | |||||||||||||||  |||| ||||||| |||||| |||||| |||| ||||||    
T  12913933 atagagttgggtgacattggtgatattggtcaatcacaatgtcataatgcttgtgaaagagagagatacacaagaattgtgacattgtgattggccaatg 12913834  T
Q  116 tcactaatgtcac 128  Q
    |||| ||||||||    
T  12913833 tcaccaatgtcac 12913821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 16439250 - 16439165
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||||||  |||||| ||||  |||||||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||    
T  16439250 ggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcac 16439165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 19598443 - 19598353
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcactaatgt 125  Q
    |||||||||  ||||||||||||  | |||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||| |||||    
T  19598443 ggtgacattaaccaatcataatgtca-aatgcttgtgaaagagagagaaacacaagcattgtggtattgtgattgaccaatgtcaccaatgt 19598353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 2093945 - 2094022
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcatt 93  Q
    ||||||||||||||||||||||||||||  |||||| ||||  | ||||||||||||  |||||||||||||||||||    
T  2093945 atagagttgggtgatattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcatt 2094022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 538
Target Start/End: Original strand, 22652747 - 22652801
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttaga 538  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  22652747 taaactctaaaagcgataaattacgctactgatacaattatataaagaatttaga 22652801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 291105 - 291158
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgt 71  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  291105 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgt 291158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 26662529 - 26662426
Alignment:
Q  19 tagagttgggtgatattggtgacattgg-ccaatcataatgctacaatgcttgtg--aaagagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||||||||||||||||| | ||||| ||||  ||||| ||||||  ||||||||||||||||||| |||  |||||| ||||  |||||    
T  26662529 tagagttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatg 26662430  T
Q  116 tcac 119  Q
    ||||    
T  26662429 tcac 26662426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 26934124 - 26934021
Alignment:
Q  19 tagagttgggtgatattggtgacattgg-ccaatcataatgctacaatgcttgtg--aaagagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||||||||||||||||| | ||||| ||||  ||||| ||||||  ||||||||||||||||||| |||  |||||| ||||  |||||    
T  26934124 tagagttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatg 26934025  T
Q  116 tcac 119  Q
    ||||    
T  26934024 tcac 26934021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 327 - 401
Target Start/End: Complemental strand, 7335607 - 7335533
Alignment:
Q  327 agttaacatgtatagaaatatttttgtcatttattttgggaatgagcaaaatcgtttgagtaaatagcagaattt 401  Q
    |||||||||||||||   |||||| |||||||||||| ||||||||||||| ||||||  |||| ||||||||||    
T  7335607 agttaacatgtataggggtattttggtcatttattttaggaatgagcaaaaccgtttggataaaaagcagaattt 7335533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 19655166 - 19655220
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||    
T  19655166 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 19655220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 22499011 - 22498959
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  22499011 tggtgtccggggttcgaaccc-agaccttgcatatattatgcattgtccttacc 22498959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 29699381 - 29699429
Alignment:
Q  24 ttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  29699381 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 29699429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 38134405 - 38134479
Alignment:
Q  42 attggccaatcataatgctacaatgcttgtgaaagaga--gaaacacaagcattgtggcattgtaattgaccaat 114  Q
    |||||||||||| ||||  |||||||| ||||||||||  ||||||||||||||||| |||||| |||| |||||    
T  38134405 attggccaatcacaatgtcacaatgctagtgaaagagaaagaaacacaagcattgtgacattgtgattggccaat 38134479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 16439146 - 16439200
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||| |||||||||||||||| |||||| ||||  ||||||||||||    
T  16439146 atagagttgggtaatattggtgacattggtcaatcacaatgtcacaatgcttgtg 16439200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 30117958 - 30117904
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||| ||| |||||||| ||||| |||||||||||| ||||||||||||    
T  30117958 atagagttggatgacattggtgatattggtcaatcataatgccacaatgcttgtg 30117904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 42168935 - 42168989
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||| ||||||||||||| ||| |||||||||| |||||||| ||||||||    
T  42168935 gtggtgtctggggttcgaaccccagaccttgcatatactatgcattgtccttacc 42168989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 5846099 - 5846046
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||||| |||||| |||  |||||||||||||||||| ||||||||    
T  5846099 tggtgtccggggtttgaaccccagactttgcatatattatgcattgtccttacc 5846046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 31708136 - 31708181
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||    
T  31708136 gtggtgtccgaggttcgaaccccagaccttgcatatattatgcatt 31708181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 473
Target Start/End: Original strand, 36683460 - 36683513
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttac 473  Q
    |||||||| ||| ||||||||| | ||||||||||||||||||||| |||||||    
T  36683460 gtggtgtctgggattcgaaccccatatcttgcatatattatgcattgtccttac 36683513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 1642404 - 1642360
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||| ||||||||||| | |||||||||||||||||||||||    
T  1642404 tggtgtctggggttcgaactccagatcttgcatatattatgcatt 1642360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 461
Target Start/End: Complemental strand, 31159499 - 31159459
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatg 461  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  31159499 tggtgtccggggttcgaaccctgaatcttgcatatattatg 31159459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 472
Target Start/End: Complemental strand, 3671288 - 3671237
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    |||| ||||||||||||||||| || |||||||||||||| |||| ||||||    
T  3671288 tggtatccggggttcgaaccctggaccttgcatatattatacattatcctta 3671237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 1638465 - 1638519
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||||||| |||| |||||||||||| ||||  |||||| |||||    
T  1638465 atagagttgggtgatatttgtgatattggccaatcacaatgtcacaatgtttgtg 1638519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 6489078 - 6489024
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| |||||||| |||||| ||| ||||||||||||||||||| ||| ||||    
T  6489078 gtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctacc 6489024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 428 - 474
Target Start/End: Complemental strand, 15889474 - 15889428
Alignment:
Q  428 cggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||| |||||||||| ||||||||||||||||||| ||| ||||    
T  15889474 cggggtttgaaccctagaccttgcatatattatgcattgtccctacc 15889428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 19598340 - 19598394
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||| | |||||||||||||| |||||| ||| | ||||||||||||    
T  19598340 atagagttgggtaacattggtgacattggtcaatcacaataccacaatgcttgtg 19598394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 518
Target Start/End: Original strand, 22910821 - 22910855
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatac 518  Q
    |||||||||||| ||||||||||||||||||||||    
T  22910821 taaactctaaaagcgataaattacgctaatgatac 22910855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 33906571 - 33906517
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||| |||| |||||| |||||||||||| |||||| ||| ||||||||    
T  33906571 gtggtgtccgaggtttgaaccccagatcttgcatacattatgaattgtccttacc 33906517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 42005176 - 42005122
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||| | ||| ||||| ||| |||||||||||||||||||||| |||||    
T  42005176 gtggtgtccgagattcaaaccccagaccttgcatatattatgcattttcgttacc 42005122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 2953266 - 2953311
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||||| |||||| |||| |||||||||| |||||||||    
T  2953266 cacaagcattgtgacattgtgattggccaatgtcaccaatgtcacc 2953311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 6624847 - 6624802
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||| |||||||||||||||  || |||||||||||||||||||    
T  6624847 gtggtggccggggttcgaaccccggaccttgcatatattatgcatt 6624802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 474
Target Start/End: Original strand, 11844441 - 11844482
Alignment:
Q  433 ttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||| | ||||||||||||||||||| ||||||||    
T  11844441 ttcgaaccctaaaccttgcatatattatgcattgtccttacc 11844482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 16802555 - 16802471
Alignment:
Q  37 gtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||||| ||||||| ||||  ||||||||||| ||  ||||||||||||||  |||||  |||||| |||| ||||||||||    
T  16802555 gtgacattgaccaatcagaatgtcacaatgcttgtaaaagagagagaaacacaaatattgttacattgtgattggccaatgtcac 16802471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 32675284 - 32675328
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||    
T  32675284 gtggtgtccgga-ttcgaaccctagaccttgcatatattatgcatt 32675328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 3899865 - 3899901
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  3899865 ggtgacattggccaatcacaatgccacaatgcttgtg 3899901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 11017245 - 11017193
Alignment:
Q  422 ggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||| ||||||||  ||| ||||||||||||||||||| ||| ||||    
T  11017245 ggtgtccgggattcgaacctcagaccttgcatatattatgcattatccctacc 11017193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 16971170 - 16971206
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  16971170 ggtgacattggccaatcacaatgccacaatgcttgtg 16971206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 17145340 - 17145392
Alignment:
Q  422 ggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||| ||||||||  |||||||||||||||||| |||| || |||||    
T  17145340 ggtgtccgggattcgaacctcagatcttgcatatattatacattgtctttacc 17145392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 463
Target Start/End: Complemental strand, 27798692 - 27798652
Alignment:
Q  423 gtgtccggggttcgaaccctagatcttgcatatattatgca 463  Q
    |||||||||||||||||||| | ||||||||||| ||||||    
T  27798692 gtgtccggggttcgaaccctggctcttgcatataatatgca 27798652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 9e-41; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 484 - 641
Target Start/End: Complemental strand, 30622103 - 30621946
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||  ||||||  ||||| || | |    
T  30622103 taaactctgaaagcgataaattacgctaatgatacaatcgtataaagaatttagatgttacttcttcaataattcacc--aagcattcataaacaaattt 30622006  T
Q  584 ctcaa--catcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    |||||  |||||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  30622005 ctcaaatcatcgcagcggaataaaaacatcattacattgacatttaaataaatcatctca 30621946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 484 - 641
Target Start/End: Complemental strand, 30624724 - 30624567
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||  ||||||  ||||| || | |    
T  30624724 taaactctgaaagcgataaattacgctaatgatacaatcgtataaagaatttagatgttacttcttcaataattcacc--aagcattcataaacaaattt 30624627  T
Q  584 ctcaa--catcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    |||||  |||||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  30624626 ctcaaatcatcgcagcggaataaaaacatcattacattgacatttaaataaatcatctca 30624567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 484 - 632
Target Start/End: Complemental strand, 24533976 - 24533830
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| |||||| |||||||||||  ||||||| |||||||||| |    
T  24533976 taaactctaaaaacgataaattacgctaatgacaaaatcatataaagaatttagatgttacttcttgaataattcacc--aagcatgcataaataatttt 24533879  T
Q  584 ctcaacatcgcagcggaataaaaacatcattacatcgacaattaaataa 632  Q
    |||||||||||| |||||||| ||| |||||| || ||||  |||||||    
T  24533878 ctcaacatcgcatcggaataataacgtcattatattgacatctaaataa 24533830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 505 - 641
Target Start/End: Complemental strand, 30665407 - 30665271
Alignment:
Q  505 tacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattatctcaa--catcgcagcggaat 602  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||  ||||||| ||||| || | ||||||  ||||||||||||||    
T  30665407 tacgctaatgatacaatcgtataaagaatttagatgttacttcttcaataattcacc--aagcatgcataaacaaatttctcaaatcatcgcagcggaat 30665310  T
Q  603 aaaaacatcattacatcgacaattaaataattcatctca 641  Q
    |||||||||||||||| |||| |||||||| ||||||||    
T  30665309 aaaaacatcattacattgacatttaaataaatcatctca 30665271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 475 - 641
Target Start/End: Original strand, 28772213 - 28772379
Alignment:
Q  475 gtaacttcataaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtata 574  Q
    ||||| || |||| ||||||| | |||||||||||||||||||||||||||||||||||||||| | | ||||  || ||||||||||||  |||| |||    
T  28772213 gtaacatcctaaagtctaaaagcaataaattacgctaatgatacaatcatataaagaatttagatgctacttcgccagtaattcaccaaa--catgcata 28772310  T
Q  575 aataattatctc--aacatcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    ||||||| ||||  |||||||||| ||||||| |||||||||| ||||||| ||||||||  |||||||    
T  28772311 aataattttctcaaaacatcgcagtggaataataacatcattatatcgacatttaaataaaacatctca 28772379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 6217232 - 6217335
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||||| |||||||||||||| |||| ||||||    
T  6217232 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatg 6217331  T
Q  116 tcac 119  Q
    ||||    
T  6217332 tcac 6217335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 484 - 641
Target Start/End: Original strand, 24300842 - 24300999
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||||||| |||||||||| | |||||||||||||||||| | |||||||| ||| |||||||||||||||| ||| |  ||| |||||||||| |    
T  24300842 taaactctaaaagcgataaattaggttaatgatacaatcatatacaaaatttagatgttacttcttcaataattcatcaaca--atgcataaataattct 24300939  T
Q  584 ctc--aacatcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
     ||  ||||||| ||||||||| ||||||||||||||||||   ||||||| ||||||||    
T  24300940 ttccaaacatcgtagcggaatataaacatcattacatcgacgtctaaataagtcatctca 24300999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 38933717 - 38933614
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||  |||||||||||||||||||||||||| ||||  |||||    
T  38933717 atagagttgggtgacattggtgacgttggccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatg 38933618  T
Q  116 tcac 119  Q
    ||||    
T  38933617 tcac 38933614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 16514554 - 16514441
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||| ||||||| ||||  |||||||||||||||||  |||||||||||||||| |||||| || |||| ||||||    
T  16514554 atagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattatggcatagtgattggccaatg 16514455  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  16514454 tcaccaatgtcacc 16514441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 484 - 641
Target Start/End: Complemental strand, 30667856 - 30667699
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||| ||||| |||||||||||||||||||||||||| |||||||||||| || ||| |||||||||||||||| |  ||||||| ||||| |  | |    
T  30667856 taaactttaaaagcgataaattacgctaatgatacaatcgtataaagaatttcgatgttacttcttcaataattcatc--aagcatgaataaacagattt 30667759  T
Q  584 ctc--aacatcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    |||  || ||||  ||||||||||||| ||||||||| |||| |||||||| ||||||||    
T  30667758 ctcaaaagatcgatgcggaataaaaacgtcattacattgacatttaaataaatcatctca 30667699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 15011391 - 15011285
Alignment:
Q  37 gtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcactaatgtcaccaaagt 134  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||  ||||||| |||||||||||||| |||| ||||| |||| ||||||||| ||||    
T  15011391 gtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatatcaccaatgtcacccaagt 15011292  T
Q  135 attttcc 141  Q
    |||||||    
T  15011291 attttcc 15011285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 29508698 - 29508812
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataa-tgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaat 114  Q
    |||||||||||||| ||||||||||||| ||||||| || ||| ||||||||||||||||||  |||||||||||||||| |||||||| |||| |||||    
T  29508698 atagagttgggtgacattggtgacattgaccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaat 29508797  T
Q  115 gtcactaatgtcacc 129  Q
    ||||| ||| |||||    
T  29508798 gtcaccaatatcacc 29508812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 29925580 - 29925681
Alignment:
Q  20 agagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatgtc 117  Q
    |||||||||||||||||||||||||||||  ||| ||||  | ||||||||||||  |||||||||||||| |||||||||||||| |||| ||||||||    
T  29925580 agagttgggtgatattggtgacattggcccctcacaatgtcagaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtc 29925679  T
Q  118 ac 119  Q
    ||    
T  29925680 ac 29925681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 14229361 - 14229462
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||| ||||| |||||||||||||| |||||| ||||  ||||||||||||||  |||||||||||||||||||||| |||||| |||| ||||||    
T  14229361 atagagttcggtgacattggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattg-ccaatg 14229459  T
Q  116 tca 118  Q
    |||    
T  14229460 tca 14229462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 14470600 - 14470692
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattg 108  Q
    |||||||||||||| ||||||||||||| ||||||| |||| | |||||||||||||  |||||||||||||| ||||||| |||||| ||||    
T  14470600 atagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattg 14470692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 37961836 - 37961749
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgt 103  Q
    ||||||||| |||||||| ||||||||| ||||||| ||||| |||||||||||||||||  ||||||||||| |||| |||||||||    
T  37961836 atagagttgagtgatatttgtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattatggcattgt 37961749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 6722081 - 6721970
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||| ||| ||| |||| |||||||||||| ||||  |||||| ||||||||||  |||||||||||||||||||  ||||| ||||  |||||    
T  6722081 atagagttggttgacattagtgatattggccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatg 6721982  T
Q  116 tcactaatgtca 127  Q
    |||| |||||||    
T  6721981 tcaccaatgtca 6721970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 2828696 - 2828611
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||||||||||| ||||  ||||||||| |||||||  |||||||||||||||| || |||||| |||| ||||||||||    
T  2828696 ggtgacattggccaatcacaatgtcacaatgcttctgaaagagagagaaacacaagcattttgacattgtgattggccaatgtcac 2828611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29508821 - 29508767
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||||||||||||||||||||||||| |||||  |||||||||||    
T  29508821 atagagttgggtgatattggtgacattggccaatcacaatgccgcaatgcttgtg 29508767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 32545918 - 32545855
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga 81  Q
    ||||||||  |||| ||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  32545918 atagagtttagtgacattggtgacattggccaatcataatgtcacaatgcttatgaaagagaga 32545855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 18324884 - 18324938
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||    
T  18324884 gtggtgttcagggttcgaatcctagatcttgcatatattatgcattgtccttacc 18324938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 28771653 - 28771599
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||||||||||||   |||||||||||||||||||||| ||||||||    
T  28771653 gtggtgtccggggttcgaaccgcggatcttgcatatattatgcattgtccttacc 28771599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 37762028 - 37762121
Alignment:
Q  37 gtgacattggccaatcataatgctacaatgcttgtgaaagaga--gaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcac 128  Q
    ||||||||| ||||||| ||||   ||||||||||||||||||  |||||||||||||||||  ||||| ||||||| ||||||| ||| ||||    
T  37762028 gtgacattgaccaatcacaatgtcgcaatgcttgtgaaagagaaagaaacacaagcattgtgatattgtgattgacccatgtcaccaatatcac 37762121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 9173111 - 9173058
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgt 71  Q
    |||||||||||||| |||||||| |||||||||||| ||||| |||||||||||    
T  9173111 atagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttgt 9173058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 24393316 - 24393264
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||| ||||||    
T  24393316 gtggtgtccggggttcgaacctcagaccttgcatatattatgcattgtcctta 24393264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 560
Target Start/End: Complemental strand, 34898896 - 34898820
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcac 560  Q
    |||||||||||| |||||    |||| ||||||||||||||||||||||||||||  || ||||||| |||||||||    
T  34898896 taaactctaaaagcgataccacacgcaaatgatacaatcatataaagaatttagattttacttcttccataattcac 34898820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 2257042 - 2256988
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||| ||| ||||    
T  2257042 gtggtggccggggttcgaaccccagaccttgcatatattatgcattgtccatacc 2256988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 10065544 - 10065490
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||| |||||||||||||  | ||||||||||||||||||| ||||||||    
T  10065544 gtggtgtccagggttcgaaccctgaaacttgcatatattatgcattgtccttacc 10065490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 16514432 - 16514486
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| |||||||||||||||||||||  |||| | ||||||||||    
T  16514432 atagagttgggtgacattggtgacattggccaatcactatgccataatgcttgtg 16514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 18910523 - 18910577
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||| |||||||||||||||  |||||||||||||||| || ||||||||    
T  18910523 gtggtgtccagggttcgaaccctaggccttgcatatattatgcgttgtccttacc 18910577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 27152424 - 27152370
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||| ||| ||||    
T  27152424 gtggtgtcctgggttcgaaccccagaccttgcatatattatgcattatccctacc 27152370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 32091161 - 32091215
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||| | | ||| ||||||||| ||||||||||||||||||||||||||||    
T  32091161 gtggtgtctgagattcaaaccctagaccttgcatatattatgcattttccttacc 32091215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 34903588 - 34903534
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||||||||||||  ||| ||||||||||||||||| | ||||||||    
T  34903588 gtggtgtccggggttcgaacctcagaccttgcatatattatgcactgtccttacc 34903534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 474
Target Start/End: Original strand, 35685063 - 35685105
Alignment:
Q  432 gttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  35685063 gttcgaaccctagaccttgcatatattatgcattgtccttacc 35685105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 473
Target Start/End: Complemental strand, 2264868 - 2264815
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttac 473  Q
    ||||||||| |||||||||||| | | ||| |||||||||||||||||||||||    
T  2264868 gtggtgtccagggttcgaaccccaaaccttacatatattatgcattttccttac 2264815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 6217286 - 6217241
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||    
T  6217286 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacc 6217241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 14229415 - 14229370
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||    
T  14229415 cacaagcattgtgacattgtgattgaccaatgtcaccaatgtcacc 14229370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 428 - 465
Target Start/End: Original strand, 29133482 - 29133519
Alignment:
Q  428 cggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||||||||||||||||||||||| |||||||||    
T  29133482 cggggttcgaaccctagatcttgcatattttatgcatt 29133519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 2894073 - 2893990
Alignment:
Q  38 tgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||||| |||||| | ||  |||||||||||||||||||||  || ||||||||||||  ||||| |||| ||||||||||    
T  2894073 tgacattggtcaatcacagtgtcacaatgcttgtgaaagagagagaaatacaagcattgtgagattgtgattggccaatgtcac 2893990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 9173050 - 9173102
Alignment:
Q  77 agagaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||| ||||||||||||||||||| |||| ||||| |||| |||||||||    
T  9173050 agagaaatacaagcattgtggcattgtgattggccaatatcaccaatgtcacc 9173102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 474
Target Start/End: Complemental strand, 6141276 - 6141237
Alignment:
Q  435 cgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  6141276 cgaaccctagaccttgcatatattatgcattgtccttacc 6141237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 14892390 - 14892327
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga 81  Q
    |||||||||| ||| |||||||||||||  |||||| |||| |||||| ||| |||||||||||    
T  14892390 atagagttggatgacattggtgacattgatcaatcacaatgttacaatacttatgaaagagaga 14892327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 33018675 - 33018620
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtga 73  Q
    |||||||||||||| |||||||| ||||| |||||| ||||  |||||||||||||    
T  33018675 atagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtga 33018620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 11175856 - 11175802
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| |||| ||| |||||| ||||||||||||||||||||||| ||| ||||    
T  11175856 gtggtggccggagtttgaaccccagatcttgcatatattatgcattgtccatacc 11175802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 474
Target Start/End: Complemental strand, 12231944 - 12231894
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||| ||| || || ||||||||||||||||||| ||||||||    
T  12231944 tgtccggggttcaaactctggaccttgcatatattatgcattatccttacc 12231894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 15654860 - 15654913
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||| ||||||||| ||| ||||||||| ||||||||| ||||||||    
T  15654860 gtggtgtccggg-ttcgaaccccagaccttgcatattttatgcattatccttacc 15654913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 428 - 470
Target Start/End: Original strand, 18693660 - 18693702
Alignment:
Q  428 cggggttcgaaccctagatcttgcatatattatgcattttcct 470  Q
    ||||||| ||||||| |||||||||||||||||||||| ||||    
T  18693660 cggggtttgaaccctggatcttgcatatattatgcattgtcct 18693702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 465
Target Start/End: Complemental strand, 20239411 - 20239369
Alignment:
Q  423 gtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||||| |||||||| |||| |||||||||||||||||||    
T  20239411 gtgtccgggattcgaaccttagaccttgcatatattatgcatt 20239369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 475
Target Start/End: Original strand, 22354942 - 22354988
Alignment:
Q  429 ggggttcgaaccctagatcttgcatatattatgcattttccttaccg 475  Q
    |||||| |||| | ||||||||||||||||||||||| |||||||||    
T  22354942 ggggtttgaacaccagatcttgcatatattatgcattgtccttaccg 22354988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 24116050 - 24115941
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||  ||| |||| ||||| |||||| ||||   ||||||||||||||||  | |||||||| |||||||  |||||| |||| ||||||    
T  24116050 atagagttgggtgccattagtgatattggtcaatcacaatgtcgcaatgcttgtgaaagagtgtgaaacacaggcattgtaacattgtgattggccaatg 24115951  T
Q  116 tcactaatgt 125  Q
    | || |||||    
T  24115950 ttaccaatgt 24115941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 24592836 - 24592890
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| |||||||| |||||| ||| ||||||||||||||||||| ||| ||||    
T  24592836 gtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctacc 24592890  T

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Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 24593447 - 24593393
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||| | ||||||||||||  || ||||||||||||||||||| ||||||||    
T  24593447 gtggtgttcagggttcgaaccccggaccttgcatatattatgcattgtccttacc 24593393  T

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Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 25274819 - 25274873
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||| |||||||||||||| ||| ||| ||||||||||||||| | ||||||    
T  25274819 gtggtgttcggggttcgaaccccagaccttacatatattatgcattgttcttacc 25274873  T

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Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 20200776 - 20200731
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||| |||||||| ||||||| || |||||||||||||||||||    
T  20200776 gtggtggccggggtttgaaccctggaccttgcatatattatgcatt 20200731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 30762485 - 30762530
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||| ||| ||||||||||||| ||||||||||| |||||||||    
T  30762485 gtggtggccgaggttcgaaccctaaatcttgcatattttatgcatt 30762530  T

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Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 33018621 - 33018666
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||||| |||||| |||||||||| |||| |||||||||    
T  33018621 cacaagcattgtgacattgtgattgaccaatatcaccaatgtcacc 33018666  T

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Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 460
Target Start/End: Original strand, 2939777 - 2939813
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattat 460  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  2939777 tgtccggggttcgaaccccagaccttgcatatattat 2939813  T

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Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 12413564 - 12413512
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    ||||||| ||||||| |||||  ||| ||||||||||||||||||| ||||||    
T  12413564 gtggtgtacggggtttgaacctcagaccttgcatatattatgcattgtcctta 12413512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 12425624 - 12425572
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    ||||||| ||||||| |||||  ||| ||||||||||||||||||| ||||||    
T  12425624 gtggtgtacggggtttgaacctcagaccttgcatatattatgcattgtcctta 12425572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 433 - 465
Target Start/End: Complemental strand, 12619402 - 12619370
Alignment:
Q  433 ttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||||| |||||||||||||||||||||||    
T  12619402 ttcgaaccccagatcttgcatatattatgcatt 12619370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 15011294 - 15011342
Alignment:
Q  24 ttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||| |||||||| |||||||||||| ||||| |||||| |||||    
T  15011294 ttgggtgacattggtgatattggccaatcacaatgccacaatgtttgtg 15011342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 474
Target Start/End: Original strand, 25598562 - 25598606
Alignment:
Q  430 gggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||||| || ||||||||||||||||||| ||| ||||    
T  25598562 gggttcgaaccctggaccttgcatatattatgcattgtccatacc 25598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 313 - 405
Target Start/End: Original strand, 37892998 - 37893090
Alignment:
Q  313 actcacgctacgttagttaacatgtatagaaatatttttgtcatttattttgggaatgagcaaaatcgtttgagtaaatagcagaatttaaaa 405  Q
    ||||||||||||| |||||||||| ||||    ||||| | | |||| ||||||||||||| ||| | |||| |||| |||||||||| ||||    
T  37892998 actcacgctacgtaagttaacatgcataggggcattttggacttttactttgggaatgagcgaaaccatttgggtaattagcagaattcaaaa 37893090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 39068698 - 39068750
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    |||||||  ||||||| |||||  |||||||||||||||||||||| ||||||    
T  39068698 gtggtgtatggggttcaaaccccggatcttgcatatattatgcattgtcctta 39068750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 472
Target Start/End: Complemental strand, 39761504 - 39761457
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    |||||||||||| ||||| ||| ||||||||||||||||||| ||||||    
T  39761504 tgtccggggttcaaaccc-agaccttgcatatattatgcattgtcctta 39761457  T

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Target: chr4 (Bit Score: 78; Significance: 5e-36; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 484 - 615
Target Start/End: Original strand, 11774187 - 11774317
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaata-atta 582  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||| |||||||  ||     
T  11774187 taaactctaaaagcgataaattacgccaatgatacaatcatataaagaatttagatgttacttcttcaataattcacc--aagcatgcataaatattttt 11774284  T
Q  583 tctcaacatcgcagcggaataaaaacatcatta 615  Q
    | |||||||||||||||||||| ||||||||||    
T  11774285 tttcaacatcgcagcggaataataacatcatta 11774317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 47661972 - 47661849
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||| ||||||| ||||  |||||||||||||||||||||  |||||||||||||||||||||| |||| ||||||    
T  47661972 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 47661873  T
Q  116 tcactaatgtcaccaaagtatttt 139  Q
    |||| ||||||||| |||||||||    
T  47661872 tcaccaatgtcacccaagtatttt 47661849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 51265574 - 51265462
Alignment:
Q  19 tagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatgt 116  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  51265574 tagagttgggtgacattggtgacattgaccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgt 51265475  T
Q  117 cactaatgtcacc 129  Q
    ||| |||||||||    
T  51265474 caccaatgtcacc 51265462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 6271832 - 6271719
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    ||||||||| |||||||||||||||||||||||||| ||||  |||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||    
T  6271832 atagagttgagtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 6271733  T
Q  116 tcactaatgtcacc 129  Q
    |||| ||| |||||    
T  6271732 tcaccaatatcacc 6271719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 23444277 - 23444390
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||| ||||||| ||||  ||||||||||||||  ||||||||||||||||||||||||||||| |||| ||||||    
T  23444277 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 23444376  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  23444377 tcaccaatgtcacc 23444390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 42375140 - 42375037
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| |||||||||||||  |||||| ||||  |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  42375140 atagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatg 42375041  T
Q  116 tcac 119  Q
    ||||    
T  42375040 tcac 42375037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 484 - 563
Target Start/End: Complemental strand, 13842464 - 13842385
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaa 563  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  13842464 taaactctaaaaacgataaattacgctattgatacaatcatataaggaatttagatgttacttcttcaataattcaccaa 13842385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 53954740 - 53954637
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||| ||||| | ||||  |||||||||||||||||  ||||||||| ||||||||| |||||| |||| ||||||    
T  53954740 atagagttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtgaaagagtgagaaacactagcattgtgacattgtgattggccaatg 53954641  T
Q  116 tcac 119  Q
    ||||    
T  53954640 tcac 53954637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 26186042 - 26186124
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagagaaacacaagcattgtggcattgtaattgaccaatgtca 118  Q
    ||||||||||| |||||| ||||  ||||||||||||||||||||||||||||||||||||  ||||| |||| |||||||||    
T  26186042 ggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagaaacacaagcattgtgaaattgtgattggccaatgtca 26186124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 47404611 - 47404696
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||||||| |||||| ||||  |||||||||||||||||||||  ||| |||||||||||||||||| |||||||||||||||    
T  47404611 ggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacccaagcattgtggcattgtgattgaccaatgtcac 47404696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 484 - 612
Target Start/End: Original strand, 21957387 - 21957517
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||||||| |||||| ||||||||||||||| | ||||| |||||| |||| ||| |||||||||||| |||||||  ||||| ||||||||| ||    
T  21957387 taaactctaaaagcgataa-ttacgctaatgatacgagcatatcaagaatctagatgttacttcttcaataaatcaccaa--gcatgcataaataataat 21957483  T
Q  584 ---ctcaa--catcgcagcggaataaaaacatca 612  Q
       |||||  ||||||||||||||||||||||||    
T  21957484 tttctcaaaacatcgcagcggaataaaaacatca 21957517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 6271710 - 6271764
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  6271710 atagagttgggtgatattggtgacattggccaatcacaatgccacaatgcttgtg 6271764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 35682296 - 35682183
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaag--agagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||| ||||| ||||||||||||| || |||| ||||  ||||||||||||||||  ||||||||||||| ||| || |||||| |||| ||||||    
T  35682296 atagagttaggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatg 35682197  T
Q  116 tcactaatgtcacc 129  Q
    |||| ||| |||||    
T  35682196 tcaccaatatcacc 35682183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 55090023 - 55090108
Alignment:
Q  37 gtgacattggccaatcataatgctacaatgcttgtgaaagagagaaa--cacaagcattgtggcattgtaattgaccaatgtcact 120  Q
    |||||||||| |||||| ||||  ||||||||||||||||||||| |  ||||||||||||| |||||| ||||||||||||||||    
T  55090023 gtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagagacacaagcattgtgacattgtgattgaccaatgtcact 55090108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 40789293 - 40789206
Alignment:
Q  34 ttggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||| |||||||||||| ||||  |||||||||||||||||  ||||||||||| ||||||| |||||| |||| ||||||||||    
T  40789293 ttggtgatattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtcac 40789206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 3862676 - 3862622
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  3862676 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3862622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 3871433 - 3871379
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  3871433 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3871379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 23444399 - 23444345
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  23444399 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 23444345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 30861904 - 30861850
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  30861904 atagagttggatgatattggtgacattggccaatcacaatgccacaatgcttgtg 30861850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 51265453 - 51265507
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  51265453 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 51265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 30861825 - 30861885
Alignment:
Q  61 acaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||| ||||||||||    
T  30861825 acaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcac 30861885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 44380060 - 44379948
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaa--gagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    ||||||||| |||| |||||||| |||| ||||||| |||| |||||| ||| | |||  ||||||||| ||||||||||| |||| |||||| ||||||    
T  44380060 atagagttgagtgacattggtgatattgaccaatcacaatgttacaatacttataaaatagagagaaacgcaagcattgtgacattataattggccaatg 44379961  T
Q  116 tcactaatgtcac 128  Q
    || | ||||||||    
T  44379960 tcgccaatgtcac 44379948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 47762734 - 47762626
Alignment:
Q  22 agttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||| |||||||||||||||||| ||| |||||||  |||||||||||||||||  |||||||| || ||||||  |||||| ||||  |||||||||    
T  47762734 agttggatgatattggtgacattggtcaaccataatgtcacaatgcttgtgaaagagagagaaacataaacattgtaacattgtgattggtcaatgtcac 47762635  T
Q  120 taatgtcac 128  Q
     ||| ||||    
T  47762634 aaatatcac 47762626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 484 - 579
Target Start/End: Original strand, 6407053 - 6407146
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataa 579  Q
    |||||||||||| |||||||||||||||||||||| | ||||| |||||| |||| ||| ||||  |||||| |||||  ||||||| ||||||||    
T  6407053 taaactctaaaagcgataaattacgctaatgatacgagcatatcaagaatctagatgttacttcaccaataaatcacc--aagcatgcataaataa 6407146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 50384131 - 50384193
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtg 96  Q
    |||||||||||||||||| ||||  ||||||||||||||  ||||||||||||||||||||||    
T  50384131 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 50384193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 11166757 - 11166703
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||| ||||||||    
T  11166757 gtggtgtccggggttcgaaccttagaccttgcatatattatacattgtccttacc 11166703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 52028661 - 52028576
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||||||||||| ||||  |||||||||||||||||  ||||||||||| ||||||| ||| || |||| ||||| ||||    
T  52028661 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacatcgtgattggccaatatcac 52028576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 3862619 - 3862667
Alignment:
Q  81 aaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  3862619 aaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacc 3862667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 3871376 - 3871424
Alignment:
Q  81 aaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  3871376 aaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacc 3871424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 47661856 - 47661904
Alignment:
Q  24 ttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  47661856 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 47661904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 420 - 475
Target Start/End: Complemental strand, 51750079 - 51750024
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttaccg 475  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||| | |||||||    
T  51750079 gtggtgttctgggttcgaaccctagatcttgcatatagtatgcattgttcttaccg 51750024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Complemental strand, 3580785 - 3580739
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattt 466  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||    
T  3580785 gtggtgtccggggttcgaatcccagaccttgcatatattatgcattt 3580739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 11269765 - 11269711
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||| ||||||||||||| ||| ||||||||||||||| ||| ||||||||    
T  11269765 gtggtgtctggggttcgaacccaagaccttgcatatattatgtattgtccttacc 11269711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 19854636 - 19854582
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||| |||||||||||  |||||||||||||||||||||| ||| ||||    
T  19854636 gtggtgtccgaggttcgaaccccggatcttgcatatattatgcattgtccatacc 19854582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 474
Target Start/End: Original strand, 24785456 - 24785506
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||||||||| ||| |||| |||||||||||||| ||||||||    
T  24785456 tgtccggggttcgaaccccagaccttgtatatattatgcattgtccttacc 24785506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 474
Target Start/End: Complemental strand, 24822810 - 24822760
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||||||||| ||| |||| |||||||||||||| ||||||||    
T  24822810 tgtccggggttcgaaccccagaccttgtatatattatgcattgtccttacc 24822760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 470
Target Start/End: Original strand, 47806246 - 47806296
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcct 470  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||| ||||    
T  47806246 gtggtgttcggggttcgaaccccagaccttgcatatattatgcattgtcct 47806296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 56497598 - 56497652
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| ||||| ||||||||| ||| ||||||||||||||||||| ||||||||    
T  56497598 gtggtggccgggattcgaaccccagaccttgcatatattatgcattgtccttacc 56497652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 421 - 466
Target Start/End: Complemental strand, 9990336 - 9990291
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattt 466  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||    
T  9990336 tggtgtccgaggttcgaacctcagatcttgcatatattatgcattt 9990291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 11144655 - 11144700
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||    
T  11144655 gtggtgtccggggttcaaaccccagaccttgcatatattatgcatt 11144700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 24006096 - 24006141
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagaga 81  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||    
T  24006096 ggtgacattggccaatcacaatgacacaatgcttgtgaaagagaga 24006141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 56564973 - 56565018
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||    
T  56564973 gtggtgttcggggttcgaaccctagaccttgcatattttatgcatt 56565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 30420911 - 30420859
Alignment:
Q  422 ggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||| |||||||||||||||| ||| |||||||||| |||| ||||||||    
T  30420911 ggtgtccagggttcgaaccctagaccttacatatattatacattgtccttacc 30420859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 31430487 - 31430569
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||| ||||||| ||||  ||||||||| ||||  |||||||||||||| |   ||||||||||||||| ||||||||||    
T  31430487 ggtgacattgaccaatcacaatgtcacaatgcttatgaaagagagagaaacacaaac---gtggcattgtaattggccaatgtcac 31430569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 35682174 - 35682214
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatg 58  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  35682174 atagagttaggtgatattggtgacattggccaatcacaatg 35682214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 472
Target Start/End: Original strand, 7371539 - 7371590
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    |||||||||||||||||||||  || ||||||||||||||| ||| ||||||    
T  7371539 tggtgtccggggttcgaaccccggaccttgcatatattatgtattgtcctta 7371590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 471
Target Start/End: Original strand, 14542750 - 14542801
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctt 471  Q
    ||||||| | |||||||||||| ||| ||||||||||||||||||| |||||    
T  14542750 gtggtgttcagggttcgaaccccagaccttgcatatattatgcattgtcctt 14542801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 25818387 - 25818461
Alignment:
Q  24 ttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtg 96  Q
    |||||||| |||| ||||||||| |||||| ||||  |||||| |||||||  |||||||||||||| |||||||    
T  25818387 ttgggtgacattgatgacattggtcaatcacaatgtcacaatgattgtgaaagagagagaaacacaatcattgtg 25818461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 471
Target Start/End: Complemental strand, 42425681 - 42425634
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattatgcattttcctt 471  Q
    |||| |||||| |||||||| ||||||||||||||||||||| |||||    
T  42425681 tgtctggggtttgaaccctatatcttgcatatattatgcattgtcctt 42425634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 467
Target Start/End: Original strand, 54294412 - 54294459
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatttt 467  Q
    ||||||||||||||| ||||||  || |||||||||||||||||||||    
T  54294412 gtggtgtccggggtttgaaccccggaccttgcatatattatgcatttt 54294459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 428 - 474
Target Start/End: Original strand, 8027395 - 8027441
Alignment:
Q  428 cggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||| ||||||  |||||||||||||||||||||| ||||||||    
T  8027395 cggggtttgaacccccgatcttgcatatattatgcattatccttacc 8027441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 428 - 474
Target Start/End: Original strand, 21318251 - 21318297
Alignment:
Q  428 cggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||| |||||||||| ||||||||||||||||||| ||| ||||    
T  21318251 cggggtttgaaccctagaccttgcatatattatgcattgtccctacc 21318297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 33900714 - 33900768
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||   ||||||| | ||||||||||||||||||||||| ||||||||    
T  33900714 gtggtgtccgtaattcgaactccagatcttgcatatattatgcattgtccttacc 33900768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 38677018 - 38676956
Alignment:
Q  322 acgttagttaacatgtatagaaatatttttgtcatttattttgggaatgagcaaaatcgtttg 384  Q
    |||| ||||||||||  ||||  |||||| | |||||||||||||||||||||||| ||||||    
T  38677018 acgtaagttaacatgcgtagaggtattttggacatttattttgggaatgagcaaaaccgtttg 38676956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 46676488 - 46676542
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||| |||| ||||||||  || ||||||||||||||||||| ||||||||    
T  46676488 gtggtgtctgggggtcgaaccccggaccttgcatatattatgcattgtccttacc 46676542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 49473716 - 49473662
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| | |||||||||||||  || ||||||||||||||||||| ||||||||    
T  49473716 gtggtgactggggttcgaaccccggaccttgcatatattatgcattgtccttacc 49473662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 49949404 - 49949351
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| ||||| ||||||||| ||| ||||||||||||||||||| ||||||||    
T  49949404 gtggtggccgggattcgaaccc-agaccttgcatatattatgcattgtccttacc 49949351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 56088063 - 56088117
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||  |||||||||| | |||||||||||||||||| ||| ||||||||    
T  56088063 gtggtgtccacggttcgaaccgtggatcttgcatatattatgtattgtccttacc 56088117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 3936698 - 3936653
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||| |||||||||||||||  || |||||||||||||||||||    
T  3936698 gtggtggccggggttcgaaccccggaccttgcatatattatgcatt 3936653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 474
Target Start/End: Complemental strand, 23775580 - 23775535
Alignment:
Q  429 ggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||||| || ||||||||||||||||||| ||| ||||    
T  23775580 ggggttcgaaccctggaccttgcatatattatgcattgtccctacc 23775535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 27655801 - 27655757
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||| ||||||||||||||| ||| |||||||||||||||||||    
T  27655801 gtggtggccggggttcgaaccc-agaccttgcatatattatgcatt 27655757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 38453336 - 38453291
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||| | |||||||||||||| || |||||||||||||||||||    
T  38453336 gtggtggctggggttcgaaccctggaccttgcatatattatgcatt 38453291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 38677694 - 38677739
Alignment:
Q  355 atttattttgggaatgagcaaaatcgtttgagtaaatagcagaatt 400  Q
    ||||| ||||||||||| |||||||||||| ||||| |||||||||    
T  38677694 atttactttgggaatgaacaaaatcgtttgggtaaagagcagaatt 38677739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 41346822 - 41346782
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  41346822 tgtccggggttcgaaccct-gatcttgtatatattatgcatt 41346782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 42375086 - 42375131
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||||| |||||| ||||| ||||||||| |||||||||    
T  42375086 cacaagcattgtgacattgtgattgatcaatgtcaccaatgtcacc 42375131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 48283317 - 48283362
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||| ||| || |||||||||| |||||||||||||||||||    
T  48283317 gtggtgtctgggatttgaaccctagaacttgcatatattatgcatt 48283362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 471
Target Start/End: Complemental strand, 49308881 - 49308840
Alignment:
Q  430 gggttcgaaccctagatcttgcatatattatgcattttcctt 471  Q
    |||||||||||| ||| ||||||||||||||||||| |||||    
T  49308881 gggttcgaaccccagaccttgcatatattatgcattgtcctt 49308840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 53954686 - 53954731
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||||| |||||||||||  ||||||||| |||||||||    
T  53954686 cacaagcattgtgacattgtaattggacaatgtcaccaatgtcacc 53954731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 463
Target Start/End: Original strand, 626981 - 627021
Alignment:
Q  423 gtgtccggggttcgaaccctagatcttgcatatattatgca 463  Q
    ||||||||||||||||||| || ||||||||||| ||||||    
T  626981 gtgtccggggttcgaaccccagctcttgcatataatatgca 627021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 5048930 - 5048890
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatg 58  Q
    |||||||||||||| |||| ||||||||| |||||||||||    
T  5048930 atagagttgggtgacattgatgacattggtcaatcataatg 5048890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 471
Target Start/End: Complemental strand, 6474507 - 6474459
Alignment:
Q  423 gtgtccggggttcgaaccctagatcttgcatatattatgcattttcctt 471  Q
    ||||||||||||||||||| ||| ||||| ||||| ||||||| |||||    
T  6474507 gtgtccggggttcgaaccccagaccttgcttatatgatgcattgtcctt 6474459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 460
Target Start/End: Original strand, 19486703 - 19486739
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattat 460  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  19486703 tgtccggggttcgaaccccagatcttacatatattat 19486739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 29808258 - 29808310
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    |||||||||  ||||||||||| | | ||||||||||||||||||| ||||||    
T  29808258 gtggtgtccaaggttcgaaccccataccttgcatatattatgcattgtcctta 29808310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 30710030 - 30709990
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatg 58  Q
    |||||||| ||||| ||||||||||||||||||||| ||||    
T  30710030 atagagttaggtgacattggtgacattggccaatcacaatg 30709990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 44379938 - 44379990
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttg 70  Q
    ||||||||| |||| ||||| ||||||||||||| ||||||  ||||||||||    
T  44379938 atagagttgagtgacattggcgacattggccaattataatgtcacaatgcttg 44379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 474
Target Start/End: Complemental strand, 50656659 - 50656615
Alignment:
Q  430 gggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||||||| ||||||||||||| ||||| ||| ||||    
T  50656659 gggttcgaaccctagaccttgcatatattaagcattgtccatacc 50656615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 465
Target Start/End: Original strand, 54877590 - 54877634
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||| ||||| || ||| ||||||||||||||||||||||||||    
T  54877590 tggtggccgggttttgaatcctagatcttgcatatattatgcatt 54877634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 55090058 - 55090022
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcact 120  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  55090058 cacaagcattgtgacattgtgattgaccaatgtcact 55090022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 8e-35; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 484 - 641
Target Start/End: Complemental strand, 21199946 - 21199791
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||   ||| |||||||||| |    
T  21199946 taaactctaaaagcgataaattatgctaatgatacaatcacataaagaatttagatgttacttcttcaataattcaccaaa--gatgcataaataatttt 21199849  T
Q  584 c-tcaacatcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    | | ||||||| ||| |||| ||||||||| |||||||||| |||||||| ||||||||    
T  21199848 cttaaacatcgtagcagaat-aaaacatcaatacatcgacatttaaataaatcatctca 21199791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 29179605 - 29179718
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| |||||||||| || ||||||| ||||  ||||||||||||||||||  ||||||||||||||||||||||||| |||| ||||||    
T  29179605 atagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 29179704  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  29179705 tcaccaatgtcacc 29179718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 48993925 - 48994038
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||| ||||||| ||||  ||||||||||||||  ||||||||||||||||||||||||||||| ||||  |||||    
T  48993925 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatg 48994024  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  48994025 tcaccaatgtcacc 48994038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 5995499 - 5995383
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||| ||| ||||||||||||| ||||||| ||||| |||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||    
T  5995499 atagagttggatgacattggtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatg 5995400  T
Q  116 tcactaatgtcaccaaa 132  Q
    | || ||||||| ||||    
T  5995399 ttaccaatgtcatcaaa 5995383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 49444921 - 49445022
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagagaaacacaagcattgtggcattgtaattgaccaatgtc 117  Q
    |||||||||||||| ||||||||||| |  |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  49444921 atagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtgagagagagaaacacaagcattgtggcattgtgattggccaatgtc 49445020  T
Q  118 ac 119  Q
    ||    
T  49445021 ac 49445022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 32540756 - 32540867
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||| ||||||||||||| ||||  ||||||||||||||  |||||||||||||||||||||  |||||| ||||  |||||    
T  32540756 atagagttgggtgacattggtggcattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtaacattgtgattggtcaatg 32540855  T
Q  116 tcactaatgtca 127  Q
    |||| |||||||    
T  32540856 tcaccaatgtca 32540867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 37155158 - 37155060
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcactaatgtcaccaaa 132  Q
    |||||||||||||||||| ||||  ||||| |||||||||||||||  ||||||||||||||| |||||| |||| |||||||||| ||||||||||||    
T  37155158 ggtgacattggccaatcacaatgtcacaatacttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcaccaatgtcaccaaa 37155060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 17127572 - 17127685
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||| ||||| ||| ||||||||| ||||||| ||||  ||||||||||||||  |||||||||||||||||||||| |||| | ||||  |||||    
T  17127572 atagagttaggtgacattagtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattttgattggtcaatg 17127671  T
Q  116 tcactaatgtcacc 129  Q
    ||||||||||||||    
T  17127672 tcactaatgtcacc 17127685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 44706809 - 44706905
Alignment:
Q  36 ggtgacattggccaatcataa-tgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||||||||||| || ||| ||||||||||||||||||  |||||||||||||||| |||||||| |||| |||||||||| |||||||||    
T  44706809 ggtgacattggccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcaccaatgtcacc 44706905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 15220941 - 15220838
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| |||||||| |||||||||||| |||   |||||||||||||||||  |||||||||||||||||||  || || |||||||||||    
T  15220941 atagagttgggtgacattggtgatattggccaatcacaatctcacaatgcttgtgaaagagagagaaacacaagcattgtgagatcgtgattgaccaatg 15220842  T
Q  116 tcac 119  Q
    ||||    
T  15220841 tcac 15220838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 48498529 - 48498432
Alignment:
Q  34 ttggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||||| ||||||| |||| ||| ||||||||||||||||||  ||||||| |||||||| ||| | ||||||||||||||| |||||||||    
T  48498529 ttggtgacattgaccaatcacaatgttaccatgcttgtgaaagagagagaaacacaaacattgtggtattatgattgaccaatgtcacaaatgtcacc 48498432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 19711206 - 19711302
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagagaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcaccaaa 132  Q
    |||||||||| ||||||| |||| |||||||| ||||||||||||||||| ||| |||||| |||||||||   ||||||| || ||||||||||||    
T  19711206 ggtgacattgaccaatcacaatgttacaatgcatgtgaaagagagaaacataagaattgtgacattgtaatcagccaatgttaccaatgtcaccaaa 19711302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 38674531 - 38674614
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||| |||||||||||| ||||  |||||||||||||||||||||||||||||||||||| |||| | |||| ||||| ||||    
T  38674531 ggtgatattggccaatcacaatgtcacaatgcttgtgaaagagagaaacacaagcattgtgacattatgattggccaatatcac 38674614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 741528 - 741613
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||| ||||||| ||||  ||||||||||||||||||  |||||||||||||||||| |||||| || ||||||||||||    
T  741528 ggtgacattgcccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgatcgaccaatgtcac 741613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 29371498 - 29371395
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||| | ||||| |||||||| |||| ||||||| ||||  |||||||||||||||||  ||||||||||| ||||||| |||||| |||| ||||||    
T  29371498 atagagctaggtgacattggtgatattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatg 29371399  T
Q  116 tcac 119  Q
    ||||    
T  29371398 tcac 29371395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 33219703 - 33219601
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagag--aaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||| ||| |||||||||||||  |||||| ||||  | ||||||||||||||||||  |||||||||||||||  |||||| ||||| |||||    
T  33219703 atagagttggatgacattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagaaaaacacaagcattgtaacattgtgattgatcaatg 33219604  T
Q  116 tca 118  Q
    |||    
T  33219603 tca 33219601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 46333974 - 46334056
Alignment:
Q  38 tgacattggccaatcataatgctacaatgcttgtgaaagagag--aaacacaagcattgtggcattgtaattgaccaatgtca 118  Q
    |||||||||||||||| ||||  ||||||||||||||||||||  |||||||||||||||| |||||| ||||  ||||||||    
T  46333974 tgacattggccaatcacaatgtcacaatgcttgtgaaagagagaaaaacacaagcattgtgacattgtgattggtcaatgtca 46334056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29179727 - 29179673
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  29179727 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 29179673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 34062321 - 34062236
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||| ||||||| ||||  |||||| ||||||||||||||  |||| ||||||||||||||||| |||| ||||||||||    
T  34062321 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacataagcattgtggcattgtgattggccaatgtcac 34062236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 5694914 - 5695000
Alignment:
Q  34 ttggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||||||||| |||||| |||  || ||||||||||||||||  ||||||||||  |||||| ||||||||||||||||||||||    
T  5694914 ttggtgacattggtcaatcacaatatta-aatgcttgtgaaagagagagaaacacaaatattgtgacattgtaattgaccaatgtcac 5695000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 8337875 - 8337962
Alignment:
Q  34 ttggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||||||||| |||||| ||||  |||||| |||||||||||  |||||||||| |||||||||||||| ||||  |||||||||    
T  8337875 ttggtgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtggcattgtgattggtcaatgtcac 8337962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 484 - 555
Target Start/End: Original strand, 20406053 - 20406125
Alignment:
Q  484 taaactctaaaaacgataaa-ttacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataa 555  Q
    |||||||||||| ||||||| |||||| |||||||||||||||| ||||||||||| ||| |||||| |||||    
T  20406053 taaactctaaaagcgataaaattacgcaaatgatacaatcatatcaagaatttagatgtttcttcttaaataa 20406125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 17284022 - 17283968
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||| ||||||||    
T  17284022 gtggtgtccagggttcgaaccctggaccttgcatatattatgcattgtccttacc 17283968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 35474023 - 35473969
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||||||||||||||  | ||||||||||||||||||| ||||||||    
T  35474023 gtggtgtccggggttcgaaccctgaaccttgcatatattatgcattatccttacc 35473969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 44706914 - 44706860
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||||| |||||  |||||||||||    
T  44706914 atagagttgggtgacattggtgacattggccaatcacaatgccgcaatgcttgtg 44706860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 46932005 - 46932059
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||    
T  46932005 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 46932059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 48994047 - 48993993
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||| ||||||| ||||| ||||||||||||    
T  48994047 atagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtg 48993993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 4609108 - 4609013
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||| |||||| ||||  |||||||||||||||||  ||||||||||| ||||||| |||||| || |  |||||||||  ||||||||    
T  4609108 ggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgatgggtcaatgtcaccgatgtcacc 4609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 555
Target Start/End: Original strand, 23600841 - 23600885
Alignment:
Q  511 aatgatacaatcatataaagaatttagacgttgcttcttcaataa 555  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  23600841 aatgatacaatcatataaagaatttagatgttacttcttcaataa 23600885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 2573275 - 2573236
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataat 57  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  2573275 atagagttggatgatattggtgacattggccaatcataat 2573236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 420 - 471
Target Start/End: Complemental strand, 5907870 - 5907819
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctt 471  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||| |||||    
T  5907870 gtggtgtccggggtttgaaccctggaccttgcatatattatgcattgtcctt 5907819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 48604973 - 48605059
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcact 120  Q
    ||||||||||| |||||| ||||  |||||  ||||||||||||||  ||| ||||||||||| |||| |||||| |||||||||||    
T  48604973 ggtgacattggtcaatcacaatgtcacaatatttgtgaaagagagagaaacgcaagcattgtgacattataattggccaatgtcact 48605059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 8210375 - 8210429
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| |||||||||||||||| || |||| |||||||||||||| ||||||||    
T  8210375 gtggtggccggggttcgaaccctggaccttgtatatattatgcattgtccttacc 8210429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 10132434 - 10132488
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||  ||||||||||| ||| ||||||||||||||||||| ||||||||    
T  10132434 gtggtgtccaaggttcgaaccccagaccttgcatatattatgcattgtccttacc 10132488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 21630113 - 21630059
Alignment:
Q  75 agagagaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||||||||||||||| |||||| ||||  ||||||||| |||||||||    
T  21630113 agagagaaacacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacc 21630059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 37155054 - 37155108
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||| ||||| ||||||||||||||||||||| ||||  ||||||||||||    
T  37155054 atagagtttggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 37155108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 38448856 - 38448910
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||| |||||||||  || ||||||||||||||||||| ||||||||    
T  38448856 gtggtgtccgggattcgaaccccggaccttgcatatattatgcattgtccttacc 38448910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 50638906 - 50638960
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| ||||| |||||||||| || ||||||||||||||||||| ||||||||    
T  50638906 gtggtggccgggattcgaaccctggaccttgcatatattatgcattgtccttacc 50638960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 28395708 - 28395655
Alignment:
Q  75 agagagaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcac 128  Q
    |||||||||||||||||||||| |||||| ||||  ||||||||| ||||||||    
T  28395708 agagagaaacacaagcattgtgacattgtgattggtcaatgtcaccaatgtcac 28395655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 30821240 - 30821313
Alignment:
Q  482 cataaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataa 555  Q
    ||||| |||||||| | |||||  |||| |||||||||||||| ||||||||||||| ||| ||||||| ||||    
T  30821240 cataatctctaaaagcaataaaacacgcaaatgatacaatcatgtaaagaatttagatgttacttcttccataa 30821313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 37045136 - 37045181
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||| |||||||||||||| || |||||||||||||||||||    
T  37045136 gtggtgtctggggttcgaaccctggaccttgcatatattatgcatt 37045181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 9157397 - 9157327
Alignment:
Q  61 acaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||| ||||||||||  ||||||||||||||| |||||| ||||  |||||| || |||||||||    
T  9157397 acaatgcttgagaaagagagagaaacacaagcattgtgacattgtgattggtcaatgttaccaatgtcacc 9157327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 28928803 - 28928850
Alignment:
Q  34 ttggtgacattggccaatcataatgctacaatgcttgtgaaagagaga 81  Q
    |||||||||||||||||||| ||||  ||| |||||||||||||||||    
T  28928803 ttggtgacattggccaatcacaatgtcacagtgcttgtgaaagagaga 28928850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 472
Target Start/End: Complemental strand, 30937545 - 30937494
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    |||||||||| |||||||||| ||| |||||||||||||| |||| ||||||    
T  30937545 tggtgtccggagttcgaaccccagaccttgcatatattatacattgtcctta 30937494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 46932061 - 46932014
Alignment:
Q  82 aacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||| |||||||||||||| |||| |||||||||| |||||||||    
T  46932061 aacacaaacattgtggcattgtgattggccaatgtcaccaatgtcacc 46932014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 1091674 - 1091620
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||||||||||||| ||| ||||||| ||||  |||||| |||||    
T  1091674 atagagttgggtgatattggtgactttgaccaatcacaatgtcacaatgtttgtg 1091620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 3136678 - 3136732
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||  ||||||||||||| ||| ||||||||||||||| || |||||    
T  3136678 gtggtgtccggaattcgaaccctagaccttacatatattatgcattgtctttacc 3136732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 466
Target Start/End: Complemental strand, 3481632 - 3481586
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattt 466  Q
    |||||| |||||||| |||||| ||| ||||||||||||||||||||    
T  3481632 gtggtggccggggtttgaaccccagaccttgcatatattatgcattt 3481586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 5995377 - 5995431
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||| | ||| |||||| |||||||||||||| ||||| ||||||||||||    
T  5995377 atagagtttgatgacattggtaacattggccaatcacaatgccacaatgcttgtg 5995431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 9157318 - 9157372
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| |||||| |||||| ||||||| ||||  ||||||||||||    
T  9157318 atagagttgggtgacattggtaacattgaccaatcacaatgtcacaatgcttgtg 9157372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 9639807 - 9639861
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||| ||||||||| |  || ||||||||||||||||||| ||||||||    
T  9639807 gtggtgtccgaggttcgaactccggaccttgcatatattatgcattgtccttacc 9639861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 465
Target Start/End: Complemental strand, 11681291 - 11681249
Alignment:
Q  423 gtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||||||| |||||| ||| |||||||||||||||||||    
T  11681291 gtgtccggggtttgaaccccagaccttgcatatattatgcatt 11681249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 21630054 - 21630104
Alignment:
Q  22 agttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||| ||||||||||||| ||||||| ||||  ||||||||||||    
T  21630054 agttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 21630104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 21638184 - 21638130
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||||||||||||||  || ||||||||||| ||||||| ||| ||||    
T  21638184 gtggtgtccggggttcgaaccccggaccttgcatatatcatgcattgtccgtacc 21638130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 28395645 - 28395699
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    ||||||||| |||| ||||||||||||| ||||||| ||||  ||||||||||||    
T  28395645 atagagttgagtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 28395699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 32540878 - 32540824
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    ||||| |||| ||| ||||||||||||| ||||||| |||| |||||||||||||    
T  32540878 atagaattggatgacattggtgacattgaccaatcacaatgttacaatgcttgtg 32540824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 41973326 - 41973272
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| |||||||||||||||  || ||||||||||||||||||| ||| ||||    
T  41973326 gtggtggccggggttcgaaccccggaccttgcatatattatgcattgtccctacc 41973272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 474
Target Start/End: Complemental strand, 45481560 - 45481510
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||| ||||||||||  || ||||||||||||||||||| ||||||||    
T  45481560 tgtccggagttcgaaccccggaccttgcatatattatgcattgtccttacc 45481510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 45728295 - 45728349
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    ||||||||||||||||||||||| |||| ||||||| |||   ||||||||||||    
T  45728295 atagagttgggtgatattggtgatattgaccaatcacaatatcacaatgcttgtg 45728349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 47528437 - 47528491
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||||||||||||   || ||||| ||||||||||||| ||||||||    
T  47528437 gtggtgtccggggttcgaacctcggaccttgcgtatattatgcattgtccttacc 47528491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 48498423 - 48498477
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||| |||||||||| |||||||||| | |||||| |||||    
T  48498423 atagagttgggtgacatttgtgacattggtcaatcataataccacaatgtttgtg 48498477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 51503750 - 51503696
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| |||| |||||||||||||| |||| |||||||||||||| ||| ||||    
T  51503750 gtggtggccggcgttcgaaccctagaccttggatatattatgcattgtccctacc 51503696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 474
Target Start/End: Original strand, 13615603 - 13615656
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| ||||||||||||| | || ||||||| ||||||||||| ||||||||    
T  13615603 tggtgttcggggttcgaaccttggaccttgcatgtattatgcattgtccttacc 13615656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 17127626 - 17127581
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||||| |||||| ||||  |||||||||||||||||||    
T  17127626 cacaagcattgtgacattgtgattggtcaatgtcactaatgtcacc 17127581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 580
Target Start/End: Complemental strand, 18624028 - 18623935
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataat 580  Q
    ||||||| |||| |||||||||| ||||||||||| | ||||| |||||| |||| ||| ||||  |||||| |||||  ||||||| |||||||||    
T  18624028 taaactcgaaaagcgataaattatgctaatgatacga-catatcaagaatctagatgttacttcgccaataaatcacc--aagcatgcataaataat 18623935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 474
Target Start/End: Complemental strand, 24631897 - 24631856
Alignment:
Q  433 ttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||| | |||||||||||||||||||||| ||||||||    
T  24631897 ttcgaaccttggatcttgcatatattatgcattatccttacc 24631856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 26256079 - 26256124
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||| |||| ||||||||||||  ||||||||||||||||||||||    
T  26256079 gtggagtccagggttcgaaccccggatcttgcatatattatgcatt 26256124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 474
Target Start/End: Original strand, 45418054 - 45418107
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||| ||||||| |||  | ||||||||||||||||||| ||||||||    
T  45418054 tggtgtccggagttcgaatcctgaaccttgcatatattatgcattatccttacc 45418107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 45728396 - 45728304
Alignment:
Q  39 gacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||| |||||| ||||  | |||||||||||||||||||  |||||||||||||||  ||||| ||||  |||| |||| ||| |||||    
T  45728396 gacattggtcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatatcaccaatatcacc 45728304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 1091582 - 1091665
Alignment:
Q  48 caatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||| ||||  ||||||||||||||||||  |||||||||| ||||||| |||||| ||||  ||| ||||| ||| |||||    
T  1091582 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggtcaaagtcaccaatatcacc 1091665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 354 - 398
Target Start/End: Original strand, 9862923 - 9862967
Alignment:
Q  354 catttattttgggaatgagcaaaatcgtttgagtaaatagcagaa 398  Q
    |||||||||||||||||||| ||||| |||| ||||| |||||||    
T  9862923 catttattttgggaatgagcgaaatcatttgggtaaagagcagaa 9862967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 11354012 - 11354052
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattatgcat 464  Q
    |||||||||||| ||||| ||| ||||||||||||||||||    
T  11354012 tgtccggggttcaaaccccagaccttgcatatattatgcat 11354052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 474
Target Start/End: Original strand, 21400023 - 21400067
Alignment:
Q  430 gggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||| ||| ||||||||||||||||||| ||| ||||    
T  21400023 gggttcgaacccaagaccttgcatatattatgcattgtccctacc 21400067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 428 - 472
Target Start/End: Original strand, 23405356 - 23405400
Alignment:
Q  428 cggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    |||| |||||||||| || ||||||||||||||||||| ||||||    
T  23405356 cgggattcgaaccctggaccttgcatatattatgcattgtcctta 23405400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 28039856 - 28039904
Alignment:
Q  426 tccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||| ||||  ||| ||||||||||||||||||| ||||||||    
T  28039856 tccggggttcaaacctcagaccttgcatatattatgcattgtccttacc 28039904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 474
Target Start/End: Complemental strand, 30561784 - 30561740
Alignment:
Q  430 gggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||| |||| ||||||||||||||||||| | ||||||    
T  30561784 gggttcgaaccttagaccttgcatatattatgcattgttcttacc 30561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 474
Target Start/End: Original strand, 37944130 - 37944174
Alignment:
Q  430 gggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||| ||||||| |||||| ||||||||||||||| ||||||||    
T  37944130 gggtttgaaccctggatcttacatatattatgcattatccttacc 37944174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 49445023 - 49444987
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  49445023 ggtgacattggccaatcacaatgccacaatgcttgtg 49444987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 486 - 632
Target Start/End: Original strand, 5392 - 5537
Alignment:
Q  486 aactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattatct 585  Q
    ||||||||||  ||||||| |||||||||||| |||||||||||||||||||| ||| |||||||||||| |||||  ||||||| |||||||||| |||    
T  5392 aactctaaaagtgataaatcacgctaatgatataatcatataaagaatttagatgttacttcttcaataaatcacc--aagcatgcataaataattttct 5489  T
Q  586 c--aacatcgcagcggaataaaaacatcattacatcgacaattaaataa 632  Q
    |  |||||| ||||||||| ||||||||||||||||||||  |||||||    
T  5490 caaaacatcacagcggaat-aaaacatcattacatcgacacctaaataa 5537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 8e-32; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 497 - 641
Target Start/End: Complemental strand, 10835951 - 10835811
Alignment:
Q  497 cgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattatctcaacatcgcag 596  Q
    |||||||||||||||||||||||||   |||||||||||||| ||| | ||||||||||||||| ||||||||| |||||||||| ||||||||| ||||    
T  10835951 cgataaattacgctaatgatacaat---ataaagaatttagatgttacctcttcaataattcac-aaaagcatgcataaataattttctcaacattgcag 10835856  T
Q  597 cggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    |||||||| |||||||||| || ||||  |||||||  |||||||    
T  10835855 cggaataataacatcattatattgacatctaaataagacatctca 10835811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 41753094 - 41752981
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    ||||||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||||||  |||||||||| |||||||||||||| |||| ||||||    
T  41753094 atagagttgagtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagaaagaaacacaaacattgtggcattgtgattggccaatg 41752995  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  41752994 tcaccaatgtcacc 41752981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 1801454 - 1801557
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||||| |||||||||||||| |||| ||||||    
T  1801454 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatg 1801553  T
Q  116 tcac 119  Q
    ||||    
T  1801554 tcac 1801557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 51046081 - 51046192
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||| |||||||||||||||||  |||||||||||  |||||| |||||||  ||||||||||||||||||| ||||||||| |||| ||||||    
T  51046081 atagagttggatgatattggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattatggcattgtgattggccaatg 51046180  T
Q  116 tcactaatgtca 127  Q
    |||| |||||||    
T  51046181 tcaccaatgtca 51046192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 47492061 - 47492168
Alignment:
Q  24 ttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg--aaagagagaaacacaagcattgtggcattgtaattgaccaatgtcacta 121  Q
    |||||||| ||||||||||||||||||||| ||||  ||||||||||||  |||||||||||||||||||||||| |||||| |||| ||||| | || |    
T  47492061 ttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaaaagagagaaacacaagcattgtgacattgtgattggccaatatgacca 47492160  T
Q  122 atgtcacc 129  Q
    ||||||||    
T  47492161 atgtcacc 47492168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 30476500 - 30476585
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||||||||||| ||||  ||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||||||    
T  30476500 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcac 30476585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 30580764 - 30580877
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagaga--gaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    ||||| |||||||| |||||||| |||| ||||||||||||  |||||  ||||||||||||  |||||||||||| |||| |||||| |||||||||||    
T  30580764 atagaattgggtgacattggtgatattgaccaatcataatgtcacaatatttgtgaaagagatagaaacacaagcactgtgacattgtgattgaccaatg 30580863  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  30580864 tcacaaatgtcacc 30580877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 16279758 - 16279837
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaa 564  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||| ||| ||| |||||||||||||||||    
T  16279758 taaactctaaaagcgataaattacgctaatgatacaatcatat-acgaatttagatgttacttattcaataattcaccaaa 16279837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 33689288 - 33689193
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||  ||||||||||||||| |||||| |||||||||| |||  |||||||||    
T  33689288 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatatcatcaatgtcacc 33689193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 43139735 - 43139830
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||| || |||||| ||||  | ||||||||||||||||  ||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  43139735 ggtgacatcggtcaatcacaatgtcagaatgcttgtgaaagagagagaaacacaagcattgtggcattgttattggccaatgtcaccaatgtcacc 43139830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 498 - 556
Target Start/End: Original strand, 10929173 - 10929231
Alignment:
Q  498 gataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataat 556  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  10929173 gataaattacgctaatgatacaatcatataaagaatttagatgttatttcttcaataat 10929231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 497 - 613
Target Start/End: Original strand, 13437941 - 13438056
Alignment:
Q  497 cgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattatctc-aacatcgca 595  Q
    ||||||||||||| ||| ||||||||||| |||| || |||| ||| | ||||||||||||||||  ||||| | |||||||||| | || |||||| ||    
T  13437941 cgataaattacgcaaataatacaatcatacaaaggatctagatgttacatcttcaataattcacc--aagcacgcataaataattttttcaaacatcaca 13438038  T
Q  596 gcggaataaaaacatcat 613  Q
    ||||||||||||||||||    
T  13438039 gcggaataaaaacatcat 13438056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 30734410 - 30734523
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||| ||||| |||| |||||||| || |||| ||||  |||||||||||||||||  |||||||||||| ||| || |||||| |||| ||||||    
T  30734410 atagagtttggtgacattgatgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatg 30734509  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  30734510 tcaccaatgtcacc 30734523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 484 - 604
Target Start/End: Original strand, 8875179 - 8875298
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    ||||||||||||| |||||||||| |||||||||| ||||||| |||||| |||| ||| ||||  ||||||||||||  ||||||| || ||||||| |    
T  8875179 taaactctaaaaatgataaattacactaatgatacgatcatatcaagaatctagatgttacttcaccaataattcacc--aagcatgcat-aataatttt 8875275  T
Q  584 ctca--acatcgcagcggaataa 604  Q
    || |  |||||||||||||||||    
T  8875276 cttaagacatcgcagcggaataa 8875298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 1149059 - 1149113
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||    
T  1149059 gtggtgtccagggttcgaaccctagaccttgcatatattatgcattgtccttacc 1149113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 29031740 - 29031825
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||| ||||| |||||| ||||  ||||||||||||||||||  |||||||||| ||||||| ||||||||||||||||| ||||    
T  29031740 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtaattgaccaatatcac 29031825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 47677279 - 47677366
Alignment:
Q  34 ttggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||||| || |||| ||||  ||||||||||||||||||  |||||||||| ||||||| |||||| ||||| |||||||||    
T  47677279 ttggtgacattgaccgatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattgatcaatgtcac 47677366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 41752972 - 41753026
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||    
T  41752972 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 41753026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 43139839 - 43139785
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||| | ||||| ||||||||||||    
T  43139839 atagagttgggtgacattggtgacattggccaataacaatgccacaatgcttgtg 43139785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 16308488 - 16308416
Alignment:
Q  482 cataaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataa 555  Q
    |||||||||||||| |||||||||||||||||||||| | |||||  |||||||||| ||| | ||||||||||    
T  16308488 cataaactctaaaagcgataaattacgctaatgatacga-catatccagaatttagatgttacatcttcaataa 16308416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 35191809 - 35191861
Alignment:
Q  422 ggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  35191809 ggtgtctggggttcgaaccccagaccttgcatatattatgcattgtccttacc 35191861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 39057015 - 39057078
Alignment:
Q  66 gcttgtgaaagagagaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||||||||||||||| ||| ||| |||||| |||| || ||||||| |||||||||    
T  39057015 gcttgtgaaagagagaaacacaaacatcgtgacattgtcattgtccgatgtcaccaatgtcacc 39057078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 45103117 - 45103180
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga 81  Q
    |||||||||||||| |||||||| ||||  |||||| ||||  |||||||||||||||||||||    
T  45103117 atagagttgggtgacattggtgatattgatcaatcacaatgtcacaatgcttgtgaaagagaga 45103180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 50524832 - 50524730
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    ||||||||| |||| |||||||| ||| | |||||| |||| ||| ||||||||||||||  ||||||||||| ||||||| |||| | ||||  |||||    
T  50524832 atagagttgagtgacattggtgatattagtcaatcacaatgttacgatgcttgtgaaagagagagaaacacaaacattgtgacattatgattggtcaatg 50524733  T
Q  116 tca 118  Q
    |||    
T  50524732 tca 50524730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 474
Target Start/End: Original strand, 54230092 - 54230143
Alignment:
Q  423 gtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||||||||||| | | ||||||||||||||||||| ||||||||    
T  54230092 gtgtccggggttcgaaccccaaaccttgcatatattatgcattgtccttacc 54230143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 568 - 641
Target Start/End: Original strand, 10932511 - 10932585
Alignment:
Q  568 atgtataaataattatctcaa-catcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    |||||||||||||| |||||| |||  ||||||||| ||||| ||||||||||||||  ||||||| ||||||||    
T  10932511 atgtataaataattttctcaaacatttcagcggaattaaaacgtcattacatcgacatctaaataaatcatctca 10932585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 18321761 - 18321668
Alignment:
Q  38 tgacattggccaatcataatgctacaatgcttgtgaaagagagaaa--cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||| |||||| ||||  ||||||| ||||||| |||||||  ||||| | ||||| |||||| ||||||||||||||| ||| |||||    
T  18321761 tgacattggtcaatcacaatgtcacaatgcatgtgaaaaagagaaaaacacaaactttgtgacattgtgattgaccaatgtcaccaatatcacc 18321668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 27143117 - 27143063
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||| ||||||||||||| ||| |||||||||| |||| ||||||||    
T  27143117 gtggtgtccgggattcgaaccctagaccttacatatattatacattgtccttacc 27143063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 27397602 - 27397656
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||| ||| ||||    
T  27397602 gtggtgtccggggttcgaaccttagaccttgcatatattatacattgtccatacc 27397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 28130924 - 28130978
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||| ||| ||||| ||| ||||||||||||||||||| ||||||||    
T  28130924 gtggtgtccgggattcaaaccccagaccttgcatatattatgcattgtccttacc 28130978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 51046203 - 51046149
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||| ||| ||||||||||||||||||||| ||||| | ||||||||||    
T  51046203 atagagttggatgacattggtgacattggccaatcacaatgccataatgcttgtg 51046149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 51882190 - 51882244
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||| ||| ||||    
T  51882190 gtggtggccggggtttgaaccctggatcttgcatatattatgcattgtccatacc 51882244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 1801508 - 1801463
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||    
T  1801508 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcacc 1801463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 16307417 - 16307345
Alignment:
Q  482 cataaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataa 555  Q
    |||||||||||||| ||||||||||||||||||||||   |||||  |||||||||| ||| | ||||||||||    
T  16307417 cataaactctaaaagcgataaattacgctaatgatac-ggcatatcgagaatttagatgttacatcttcaataa 16307345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 433 - 474
Target Start/End: Complemental strand, 17588420 - 17588379
Alignment:
Q  433 ttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  17588420 ttcgaaccccagatcttgcatatattatgcattgtccttacc 17588379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 473
Target Start/End: Original strand, 25505692 - 25505744
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttac 473  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||    
T  25505692 gtggtgtccggg-ttcgaaccccagaccttgcatatattatgcattgtccttac 25505744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 38573563 - 38573608
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||||    
T  38573563 gtggtgtccggggttcgaatcctagaccttgtatatattatgcatt 38573608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 18321659 - 18321699
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatg 58  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  18321659 atagagttgggtgatattggtgacattggtcaatcacaatg 18321699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 41753040 - 41753084
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcac 128  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||    
T  41753040 cacaagcattgtggcattgtgattggccaatgtcaccaatgtcac 41753084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 45096097 - 45096045
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    |||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||    
T  45096097 gtggtgtctggggttcgaaccacagaccttgcatatattatgcattgtcctta 45096045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 50663976 - 50663876
Alignment:
Q  300 ctagcgtgagttgactcacgctacgttagttaacatgtatagaaatatttttgtcatttattttgggaatgagcaaaatcgtttgagtaaatagcagaat 399  Q
    ||||| |||||| ||||||||||||| ||||||||||  |||    ||||| || ||||| ||||||||||||| ||||| |||| || || ||||||||    
T  50663976 ctagcttgagttaactcacgctacgtgagttaacatgcgtaggggcattttggttatttactttgggaatgagcgaaatcatttgggtgaagagcagaat 50663877  T
Q  400 t 400  Q
    |    
T  50663876 t 50663876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 538
Target Start/End: Complemental strand, 3295655 - 3295600
Alignment:
Q  484 taaactctaaaaacgataaattac-gctaatgatacaatcatataaagaatttaga 538  Q
    |||||||| ||| ||||||||||| ||||||||||| |||||||||| ||||||||    
T  3295655 taaactcttaaagcgataaattacagctaatgatacgatcatataaataatttaga 3295600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 463
Target Start/End: Original strand, 6835849 - 6835884
Alignment:
Q  428 cggggttcgaaccctagatcttgcatatattatgca 463  Q
    |||||||||||||||||| |||||||||||||||||    
T  6835849 cggggttcgaaccctagaccttgcatatattatgca 6835884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 471
Target Start/End: Original strand, 14149536 - 14149587
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctt 471  Q
    |||||||||||||||||||||| ||| |||||||| ||||| |||| |||||    
T  14149536 gtggtgtccggggttcgaaccccagaccttgcatacattatacattgtcctt 14149587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 538
Target Start/End: Original strand, 21662398 - 21662461
Alignment:
Q  475 gtaacttcataaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttaga 538  Q
    ||||| || |||||||||||| ||||||   |||| ||||||||| ||||||||||||||||||    
T  21662398 gtaacatcttaaactctaaaagcgataacacacgcaaatgatacattcatataaagaatttaga 21662461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 472
Target Start/End: Complemental strand, 30200896 - 30200845
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    ||||||||||||||||||||  | | ||||||||||||||||||| ||||||    
T  30200896 tggtgtccggggttcgaacctcaaaccttgcatatattatgcattgtcctta 30200845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 50549990 - 50550037
Alignment:
Q  25 tgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    ||||||||||||||||||||| ||||||| |||  |||||||||||||    
T  50549990 tgggtgatattggtgacattgaccaatcacaatattacaatgcttgtg 50550037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 55223343 - 55223249
Alignment:
Q  37 gtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||| ||||| |||||||||||  |||||||||||||||||||||  |||| ||| ||| |   ||||| |||||||||| |||| |||||||||    
T  55223343 gtgatattggtcaatcataatgtcacaatgcttgtgaaagagagagaaacataagtattctaatattgtgattgaccaatatcaccaatgtcacc 55223249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 8113552 - 8113606
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| ||||| ||||||||   |||||||||||||||||||||| ||||||||    
T  8113552 gtggtggccgggattcgaaccgcggatcttgcatatattatgcattgtccttacc 8113606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 13800738 - 13800684
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||||||||||||  | || ||||||||||||||||||| | ||||||    
T  13800738 gtggtgtccggggttcgaactgtggaccttgcatatattatgcattgttcttacc 13800684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 21024113 - 21024167
Alignment:
Q  29 tgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagagaaa 83  Q
    |||||||||||||||||| ||| || ||||  ||||| |||||||||||||||||    
T  21024113 tgatattggtgacattggtcaaacacaatgtcacaattcttgtgaaagagagaaa 21024167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 25441490 - 25441544
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| |||||||| |||||| ||| ||||||||||||||||||| ||| ||||    
T  25441490 gtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccatacc 25441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 466
Target Start/End: Complemental strand, 25730473 - 25730427
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattt 466  Q
    |||||| ||||||||||||||| ||| |||| |||||||||||||||    
T  25730473 gtggtggccggggttcgaaccccagaccttgtatatattatgcattt 25730427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 25902851 - 25902797
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||  ||||||||||| ||| |||||||||||||| |||| ||||||||    
T  25902851 gtggtgtccaaggttcgaaccccagaccttgcatatattatacattatccttacc 25902797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 474
Target Start/End: Original strand, 35126263 - 35126313
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||| || |||||| ||||||||||||||||||||||| ||| ||||    
T  35126263 tgtccgggatttgaaccccagatcttgcatatattatgcattatccctacc 35126313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 47492177 - 47492123
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| |||||| | |||||||||||| ||||  ||||||||||||    
T  47492177 atagagttgggtgacattggtcatattggccaatcacaatgtcacaatgcttgtg 47492123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 53208041 - 53207987
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||  |||||||||||| ||| |||||||||||||||||||  |||||||    
T  53208041 gtggtgtcaagggttcgaaccccagaccttgcatatattatgcattgcccttacc 53207987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 53996370 - 53996316
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| ||||| ||||||||| ||| ||||||||||||||||||| ||| ||||    
T  53996370 gtggtggccgggattcgaaccccagaccttgcatatattatgcattgtccatacc 53996316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 2453884 - 2453839
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||| ||| ||||||||||||| | |||||||||||||||||||    
T  2453884 gtggtggccgaggttcgaaccctaaaccttgcatatattatgcatt 2453839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 10594747 - 10594694
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||  |||| |||||||| | ||||||||||||||||||| ||||||||    
T  10594747 tggtgtccaaggtttgaaccctaaaccttgcatatattatgcattgtccttacc 10594694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 555
Target Start/End: Original strand, 12800847 - 12800928
Alignment:
Q  475 gtaacttcataaactctaaaaacgataaattacgctaatgatacaa-tcatataaagaatttagacgttgcttcttcaataa 555  Q
    ||||| || |||||| | ||| ||||||||||||| ||| |||||| |||||||||||||||||| | | |||||| |||||    
T  12800847 gtaacatcctaaacttttaaagcgataaattacgcaaataatacaaatcatataaagaatttagatgctacttctttaataa 12800928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 14741864 - 14741811
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||| ||||||||| | | | ||||||||||||||||||| ||||||||    
T  14741864 tggtgtccgaggttcgaactccaaaccttgcatatattatgcattgtccttacc 14741811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 14771402 - 14771357
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||||||| ||||||||  ||| |||||||||||||||||||    
T  14771402 gtggtgtccgggattcgaacctcagaccttgcatatattatgcatt 14771357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 16792964 - 16793009
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||| |||||||| ||||||| || |||||||||||||||||||    
T  16792964 gtggtgaccggggtttgaaccctggaccttgcatatattatgcatt 16793009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 474
Target Start/End: Original strand, 21914070 - 21914115
Alignment:
Q  429 ggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||||| | | ||||||||||||||||||| ||||||||    
T  21914070 ggggttcgaaccccataccttgcatatattatgcattgtccttacc 21914115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 29394242 - 29394201
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatg 461  Q
    |||||||||| ||||||||||||| | |||||||||||||||    
T  29394242 gtggtgtccgtggttcgaaccctataccttgcatatattatg 29394201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 47492109 - 47492064
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||||| |||||| |||| |||||||||| |||||||||    
T  47492109 cacaagcattgtgacattgtgattggccaatgtcaccaatgtcacc 47492064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 52119446 - 52119393
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||| |||||||||||||||   | ||||||||||||||||||| ||||||||    
T  52119446 tggtggccggggttcgaaccccgaaccttgcatatattatgcattgtccttacc 52119393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 1801566 - 1801606
Alignment:
Q  79 agaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||| |||||||||||||| |||| ||||||||||    
T  1801566 agaaacacaaacattgtggcattgtgattggccaatgtcac 1801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 463
Target Start/End: Original strand, 2390353 - 2390393
Alignment:
Q  423 gtgtccggggttcgaaccctagatcttgcatatattatgca 463  Q
    |||||||||||||||||||||| || |||||||| ||||||    
T  2390353 gtgtccggggttcgaaccctagctcctgcatataatatgca 2390393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 472
Target Start/End: Original strand, 4216390 - 4216441
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    ||||||||| ||||||||||||  || ||||||||||||||||||| ||||||    
T  4216390 gtggtgtccagggttcgaacccc-gaccttgcatatattatgcattgtcctta 4216441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 465
Target Start/End: Original strand, 13829076 - 13829112
Alignment:
Q  429 ggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  13829076 ggggttcgaaccccagaccttgcatatattatgcatt 13829112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 474
Target Start/End: Complemental strand, 13992732 - 13992688
Alignment:
Q  430 gggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||| ||| ||||||| |||||||||||||| ||||||||    
T  13992732 gggttcgaatcctcgatcttgtatatattatgcattgtccttacc 13992688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 30734532 - 30734492
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatg 58  Q
    |||||||| ||||| ||||||||||||||||||||| ||||    
T  30734532 atagagttaggtgacattggtgacattggccaatcacaatg 30734492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 468
Target Start/End: Complemental strand, 39216406 - 39216374
Alignment:
Q  436 gaaccctagatcttgcatatattatgcattttc 468  Q
    ||||||| |||||||||||||||||||||||||    
T  39216406 gaaccctcgatcttgcatatattatgcattttc 39216374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 49418758 - 49418802
Alignment:
Q  75 agagagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||||||||||||||| ||  ||| |||||||||||||||||    
T  49418758 agagagaaacacaagcattatgatattataattgaccaatgtcac 49418802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 50550087 - 50549992
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||  |||||||||||  | |||| ||||||||||||||  ||||||||||||||   ||||| ||||  ||||||||| ||| |||||    
T  50550087 ggtgacattgatcaatcataatgtcataatgtttgtgaaagagagagaaacacaagcattgtaatattgtgattggtcaatgtcaccaatatcacc 50549992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 53681869 - 53681921
Alignment:
Q  422 ggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||| |||||||||||  | ||||||||||||||||||||| | ||||||    
T  53681869 ggtgtccagggttcgaacctcaaatcttgcatatattatgcattgttcttacc 53681921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 484 - 641
Target Start/End: Complemental strand, 721 - 565
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||||||| | |||||||||||||||||||||||||||||||  ||||||| ||| ||||||||||| ||| |   ||||||| |||||||||| |    
T  721 taaactctaaaagcaataaattacgctaatgatacaatcatataaatcatttagatgttacttcttcaatatttcgc--taagcatgcataaataatt-t 625  T
Q  584 ctcaa--catcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
     ||||  |||||||||||||||| |||||||||||||||||| |||| ||| ||||||||    
T  624 ttcaaagcatcgcagcggaataagaacatcattacatcgacatttaattaaatcatctca 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 35440978 - 35441090
Alignment:
Q  19 tagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatgt 116  Q
    ||||||||||||| ||||||||||||| ||||||| ||||  ||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||    
T  35440978 tagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgt 35441077  T
Q  117 cactaatgtcacc 129  Q
    ||| |||||||||    
T  35441078 caccaatgtcacc 35441090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 5033291 - 5033178
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||| ||||||| ||||  |||||||||||||||||  |||||||||||||||||||||||||| ||||  |||||    
T  5033291 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatg 5033192  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  5033191 tcaccaatgtcacc 5033178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 10086887 - 10086774
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||| ||||||| ||||  |||||| ||||||||||  ||||||||||| |||| || |||||| |||||||||||    
T  10086887 atagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattgaccaatg 10086788  T
Q  116 tcactaatgtcacc 129  Q
    ||||||||||||||    
T  10086787 tcactaatgtcacc 10086774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 40525088 - 40525157
Alignment:
Q  140 cccaaatcacatatccttattatacatatccactttttatatgttcttatttagcctcaaatcacatatc 209  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40525088 cccaaatcacttatccttattatacatatccactttttatatgtccttatttagcctcaaatcacatatc 40525157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 8796552 - 8796439
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaag--agagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||| | ||||||||||||||||||| ||||||| ||||  ||||||||||||||||  |||||||||||||||||||| |||||| ||||||||||     
T  8796552 atagagctaggtgatattggtgacattgaccaatcaaaatgtcacaatgcttgtgaaagatagagaaacacaagcattgtgacattgtgattgaccaata 8796453  T
Q  116 tcactaatgtcacc 129  Q
    |||| ||| |||||    
T  8796452 tcacaaatatcacc 8796439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 484 - 641
Target Start/End: Original strand, 24621972 - 24622131
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataa---t 580  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||||| |||| ||| |||||||||||| |||||  ||||||| ||||| ||   |    
T  24621972 taaactctaaaagtgataaattacgctaatgatacaatcatatcaagaatctagatgttacttcttcaataaatcacc--aagcatgcataaaaaactgt 24622069  T
Q  581 tatctc--aacatcgcagcggaataaaaacatcattacatcgacaattaaataattcatctca 641  Q
    | ||||  ||||||||||||||||  |||||||||||| |||||| | |||||| ||||||||    
T  24622070 tttctcaaaacatcgcagcggaat-gaaacatcattacgtcgacattcaaataagtcatctca 24622131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 33841599 - 33841712
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||| ||||||| | ||  ||||||||||||||  ||||||||||||||||||||||||||| | ||||  |||||    
T  33841599 atagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattctgattggtcaatg 33841698  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  33841699 tcaccaatgtcacc 33841712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 8243415 - 8243509
Alignment:
Q  37 gtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||  |||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  8243415 gtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaacgtcaccaatgtcacc 8243509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 43844479 - 43844588
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagagaaacacaagcattgtggcattgtaattgaccaatgtc 117  Q
    ||||||||||||||||||| ||| |||||  ||||||||||  |  |||||||||| |||||||||||||||||||||| |||||| ||||| |||| ||    
T  43844479 atagagttgggtgatattgatgatattggttaatcataatgtcaggatgcttgtgagagagagaaacacaagcattgtgacattgtgattgatcaatatc 43844578  T
Q  118 actaatgtca 127  Q
    || |||||||    
T  43844579 accaatgtca 43844588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 5667227 - 5667116
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||| | ||| ||||||||||||||||||| | ||||  | |||||||||||||||||||  || |||||||||||| |||||| |||||||||||    
T  5667227 atagagtttgatgacattggtgacattggccaattacaatgtcataatgcttgtgaaagagagagaaatacaagcattgtgacattgtgattgaccaatg 5667128  T
Q  116 tcactaatgtca 127  Q
    |||| |||||||    
T  5667127 tcaccaatgtca 5667116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 564
Target Start/End: Original strand, 24622143 - 24622222
Alignment:
Q  485 aaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaa 564  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||| |||| ||| |||||||||||| ||||||||    
T  24622143 aaactctaaaagcgataaattacgctaatgatacgagcatataaagaatctagatgttacttcttcaataaatcaccaaa 24622222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 39851081 - 39850982
Alignment:
Q  22 agttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||| |||| ||||||||||||| ||||||| |||  || |||||||||||||||||||  ||||||| |||||||||||||| |||| ||||||||||    
T  39851081 agttgagtgacattggtgacattgaccaatcacaatattataatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcac 39850982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 484 - 615
Target Start/End: Original strand, 22883022 - 22883156
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||||||| ||||||||||||||||||||||   ||||| || |||||||| ||| ||||  |||||| ||| ||||  |||| ||||||||| ||    
T  22883022 taaactctaaaagcgataaattacgctaatgatacggacatatcaataatttagatgttacttcgccaataaatcatcaaa--catgcataaataataat 22883119  T
Q  584 ctc-----aacatcgcagcggaataaaaacatcatta 615  Q
     ||     |||||||||||||||||||||||||||||    
T  22883120 ttcctcaaaacatcgcagcggaataaaaacatcatta 22883156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 484 - 609
Target Start/End: Original strand, 23637707 - 23637833
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcacca--aaagcatgtataaataatt 581  Q
    |||||||||||| |||||||| ||||||||||||||| ||||| |||||| |||| ||| |||||||||||| ||||||  || ||||  ||||| | ||    
T  23637707 taaactctaaaagcgataaatcacgctaatgatacaa-catatcaagaatctagatgttacttcttcaataaatcaccaagaatgcataaataaaaattt 23637805  T
Q  582 atctcaacatcgcagcggaataaaaaca 609  Q
     ||  |||||||||||||||| ||||||    
T  23637806 ctcaaaacatcgcagcggaatgaaaaca 23637833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 34229753 - 34229658
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||| |||||| |||   |||||||||||||||||||||  |||||||||||| || |||||| ||||||  |||||||||||||||||    
T  34229753 ggtgacattggtcaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattctgacattgtgattgactcatgtcactaatgtcacc 34229658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 34541829 - 34541896
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcatt 101  Q
    ||||||||||||||||||||||   ||||||||||||||  |||||||||||||||||||||||||||    
T  34541829 ggtgacattggccaatcataatatcacaatgcttgtgaaagagagagaaacacaagcattgtggcatt 34541896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 31159972 - 31159918
Alignment:
Q  27 ggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga 81  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  31159972 ggtgatattggtgacattcgccaatcataatgtcacaatgcttgtgaaagagaga 31159918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 35441099 - 35441045
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  35441099 atagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 35441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 484 - 606
Target Start/End: Original strand, 9893897 - 9894021
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaat---aat 580  Q
    |||||||||||| |||||||||||||||| |||||   ||||| |||||| |||| ||| |||||||||||| |||||  ||||||| ||||||   |||    
T  9893897 taaactctaaaagcgataaattacgctaaagatac-ggcatattaagaatctagatgttacttcttcaataagtcacc--aagcatgcataaataacaat 9893993  T
Q  581 tatctc--aacatcgcagcggaataaaa 606  Q
    | ||||  ||||||||||||||||||||    
T  9893994 tttctcaaaacatcgcagcggaataaaa 9894021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 1244695 - 1244749
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||| ||||||||    
T  1244695 gtggtgtccggggttcgaaccccagaccttgtatatattatgcattgtccttacc 1244749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 5033169 - 5033223
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||| ||||||| ||||| ||||||||||||    
T  5033169 atagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtg 5033223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 33841721 - 33841667
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||||||| ||||||| ||||| ||||||||||||    
T  33841721 atagagttgggtgacattggtgacattgaccaatcagaatgccacaatgcttgtg 33841667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 2581895 - 2581842
Alignment:
Q  76 gagagaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    |||||||||||||||||||||||||||| |||| |||||||||  |||||||||    
T  2581895 gagagaaacacaagcattgtggcattgtgattggccaatgtcaacaatgtcacc 2581842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 6296735 - 6296632
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||| ||| ||| |||||||| | |||| ||||||  ||||| |||||||||||  |||||||||||||||| || |||||| ||||  |||||    
T  6296735 atagagttggatgacattagtgacattagtcaattataatgtcacaatacttgtgaaagagagagaaacacaagcattatgacattgtgattggtcaatg 6296636  T
Q  116 tcac 119  Q
    ||||    
T  6296635 tcac 6296632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 45191135 - 45191214
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgt 95  Q
    |||||||||| |||||||||||||||||   ||||| ||||| ||||||||| ||||  |||||||||||||| ||||||    
T  45191135 atagagttggatgatattggtgacattgattaatcacaatgccacaatgcttatgaaagagagagaaacacaaacattgt 45191214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 474
Target Start/End: Complemental strand, 30623361 - 30623310
Alignment:
Q  423 gtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||| |||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  30623361 gtgttcggggttcgaaccccagaccttgcatatattatgcattgtccttacc 30623310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 2581833 - 2581887
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    ||||| |||||||| |||| |||||||||||||||| ||||| ||||||||||||    
T  2581833 atagaattgggtgacattgttgacattggccaatcacaatgccacaatgcttgtg 2581887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 8243518 - 8243464
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||||||||| |||| |||||| ||||| ||||||||||||    
T  8243518 atagagttgggtgacattggtgacgttggtcaatcacaatgccacaatgcttgtg 8243464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22649853 - 22649907
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    ||||||||| |||| ||||||||||||||| ||||| ||||| ||||||||||||    
T  22649853 atagagttgagtgacattggtgacattggctaatcacaatgccacaatgcttgtg 22649907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 45191257 - 45191203
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||| ||||||||||||||||| ||||||| |||| ||||||| |||||    
T  45191257 atagagttggatgatattggtgacattgaccaatcaaaatgttacaatgtttgtg 45191203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 9067152 - 9067099
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||| ||||||||  |||||||||||| |||||||||| ||||||||    
T  9067152 tggtgtccgggattcgaacctcagatcttgcataaattatgcattatccttacc 9067099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 484 - 580
Target Start/End: Complemental strand, 18832177 - 18832084
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataat 580  Q
    |||||||||||| |||||||||||| |||| |||| | ||||| |||||| |||| ||  |||||||||||| |||||  ||||||| |||||||||    
T  18832177 taaactctaaaagcgataaattacg-taatcatacgagcatatcaagaatctagatgtcacttcttcaataaatcacc--aagcatgcataaataat 18832084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 472
Target Start/End: Complemental strand, 8146198 - 8146150
Alignment:
Q  424 tgtccggggttcgaaccctagatcttgcatatattatgcattttcctta 472  Q
    ||||||||  ||||||||||| |||||||||||||||||||| ||||||    
T  8146198 tgtccgggagtcgaaccctagttcttgcatatattatgcattatcctta 8146150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 484 - 564
Target Start/End: Complemental strand, 17625432 - 17625353
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaa 564  Q
    |||||||||||| | |||||||||  ||||||||| ||||||| |||||| |||| ||| |||| ||||||| ||||||||    
T  17625432 taaactctaaaagcaataaattacagtaatgatac-atcatatcaagaatctagatgttacttcgtcaataaatcaccaaa 17625353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 4958728 - 4958627
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagaga--aacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||| | ||||||| ||||||||| ||||||| ||  | ||||| |||||||||||||||  ||||||| |||| || |||||| |||| ||||||    
T  4958728 atagagttagatgatattagtgacattgaccaatcacaagtc-acaatacttgtgaaagagagagaaacacaaacattatgacattgtgattggccaatg 4958630  T
Q  116 tca 118  Q
    |||    
T  4958629 tca 4958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 466
Target Start/End: Complemental strand, 36122583 - 36122548
Alignment:
Q  431 ggttcgaaccctagatcttgcatatattatgcattt 466  Q
    ||||||||||||||| ||||||||||||||||||||    
T  36122583 ggttcgaaccctagaccttgcatatattatgcattt 36122548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 8881346 - 8881292
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| |||||||| ||||||| || ||||||||||||||||||| ||| ||||    
T  8881346 gtggtggccggggtttgaaccctggaccttgcatatattatgcattgtccctacc 8881292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 354 - 400
Target Start/End: Original strand, 14087875 - 14087921
Alignment:
Q  354 catttattttgggaatgagcaaaatcgtttgagtaaatagcagaatt 400  Q
    ||||||||||| ||||||| |||| |||||||||||| |||||||||    
T  14087875 catttattttgagaatgagtaaaaccgtttgagtaaagagcagaatt 14087921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 19488371 - 19488317
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||||||| ||||| ||| ||| |||| |||||||||||||| ||||||||    
T  19488371 gtggtgtccgggattcgagccccagaccttgtatatattatgcattgtccttacc 19488317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 458
Target Start/End: Original strand, 36059351 - 36059389
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatatt 458  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  36059351 gtggtgtccggggttcgaaccctcgaccttgcatatatt 36059389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 458
Target Start/End: Complemental strand, 42844277 - 42844239
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatatt 458  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  42844277 gtggtgtccggggttcgaacccgcgatcttgcatatatt 42844239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 5667105 - 5667158
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgt 71  Q
    |||||||||| ||| |||||||||||||| |||||| ||||  |||||||||||    
T  5667105 atagagttggatgacattggtgacattggtcaatcacaatgtcacaatgcttgt 5667158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 22649908 - 22649863
Alignment:
Q  83 acacaagcattgtggcattgtaattgaccaatgtcactaatgtcac 128  Q
    ||||||||||||||||||||| |||  |||||||||| ||||||||    
T  22649908 acacaagcattgtggcattgtgattagccaatgtcaccaatgtcac 22649863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 580
Target Start/End: Original strand, 24382058 - 24382151
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataat 580  Q
    |||||||| ||| ||||||||||||||||||||||   ||||| | |||| |||| ||| ||||||||||||  ||||  ||||||| |||||||||    
T  24382058 taaactcttaaagcgataaattacgctaatgatac-ggcatattatgaatctagatgttacttcttcaataaaacacc--aagcatgcataaataat 24382151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 465
Target Start/End: Original strand, 31336805 - 31336842
Alignment:
Q  428 cggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  31336805 cggggtttgaaccctagaccttgcatatattatgcatt 31336842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 38763505 - 38763550
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||| || |||||||||||| ||| |||||||||||||||||||    
T  38763505 gtggtggccagggttcgaaccccagaccttgcatatattatgcatt 38763550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 5667173 - 5667221
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtcaccaaa 132  Q
    |||||||||| || ||||||||||| |||||||||| ||||||| ||||    
T  5667173 cacaagcattatgacattgtaattggccaatgtcaccaatgtcatcaaa 5667221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 8243450 - 8243414
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcact 120  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  8243450 cacaagcattgtggcattgtgattgatcaatgtcact 8243414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 484 - 564
Target Start/End: Complemental strand, 20503500 - 20503421
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaa 564  Q
    |||||| |||||  ||| ||||||| ||||||||| | ||||| ||||||||||| ||| | |||||||||| ||||||||    
T  20503500 taaactttaaaagtgatcaattacgttaatgatacga-catatcaagaatttagatgttacatcttcaataaatcaccaaa 20503421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 484 - 579
Target Start/End: Complemental strand, 23637105 - 23637013
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataa 579  Q
    ||||||||  || |||||||| ||||||||||||| | ||||| |||||| |||| ||| ||||| |||||| |||||  ||||||| ||||||||    
T  23637105 taaactcttcaagcgataaatcacgctaatgatacga-catatcaagaatctagatgttacttctacaataaatcacc--aagcatgcataaataa 23637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 464
Target Start/End: Original strand, 30176409 - 30176453
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcat 464  Q
    ||||||||||||||| ||||||  || ||||||||||||||||||    
T  30176409 gtggtgtccggggtttgaaccccggaccttgcatatattatgcat 30176453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 465
Target Start/End: Complemental strand, 41625256 - 41625220
Alignment:
Q  429 ggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  41625256 ggggttcgaaccctagaccttacatatattatgcatt 41625220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 12343230 - 12343127
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||||||||||||||||||||| ||||  |||||||||||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  12343230 atagagttgggtgagattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgactaatg 12343131  T
Q  116 tcac 119  Q
    ||||    
T  12343130 tcac 12343127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 17751032 - 17750921
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagag--aaacacaagcattgtggcattgtaattgaccaatg 115  Q
    ||||||||||||||||||| ||||||||||| |||| ||||  ||||||||||||||||||||  ||| |||| ||||||| |||||| |||||||||||    
T  17751032 atagagttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtgaaagagagataaatacaaacattgtgacattgtgattgaccaatg 17750933  T
Q  116 tcactaatgtca 127  Q
    |||| |||||||    
T  17750932 tcaccaatgtca 17750921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 551191 - 551276
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    ||||||||||| |||||| ||||| |||||| |||||||||||  ||||||||||||||||||||||||| |||| ||||||||||    
T  551191 ggtgacattggtcaatcacaatgccacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcac 551276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 10521873 - 10521961
Alignment:
Q  34 ttggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcact 120  Q
    |||||||||||||||||||| ||||  ||||||||| ||||||||  ||||||||||||||| || |||||| ||||||||||||||||    
T  10521873 ttggtgacattggccaatcacaatgtcacaatgcttatgaaagagagagaaacacaagcattatgacattgtgattgaccaatgtcact 10521961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 13043587 - 13043472
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    ||||||||| |||||||||||||||||||| ||||| |||   |||||||||||||||||  ||||||||||||||||||| ||||   ||||||||||     
T  13043587 atagagttgagtgatattggtgacattggctaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattgtgacatttcgattgaccaata 13043488  T
Q  116 tcactaatgtcaccaa 131  Q
    || | ||| |||||||    
T  13043487 tcgccaatatcaccaa 13043472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 24587548 - 24587478
Alignment:
Q  61 acaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatgtcactaatgtcacc 129  Q
    ||||||||||||||| ||  |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  24587548 acaatgcttgtgaaaaagcgagaaacacaagcattgtgacattgtgattgaccaatgtcactaatgtcacc 24587478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 24618609 - 24618701
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaa--agagagaaacacaagcattgtggcattgtaattg 108  Q
    |||||||||||||| |||||||||||||  |||||| ||||  | ||||||| ||||  |||||||||||||||||||||| |||||| ||||    
T  24618609 atagagttgggtgacattggtgacattgatcaatcacaatgtcataatgcttatgaaagagagagaaacacaagcattgtgacattgtgattg 24618701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 10970903 - 10970982
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaa 564  Q
    |||||||||||| ||||| |||| ||||||||||| | ||||| ||||||||||| ||| |||||||||||| ||||||||    
T  10970903 taaactctaaaagcgatagattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcaccaaa 10970982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 551295 - 551241
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    ||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  551295 atagaattggatgatattggtgacattggccaatcacaatgccacaatgcttgtg 551241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 430 - 465
Target Start/End: Complemental strand, 6610138 - 6610103
Alignment:
Q  430 gggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||||||||||||||||||||||||||||||||    
T  6610138 gggttcgaaccctagatcttgcatatattatgcatt 6610103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 555
Target Start/End: Complemental strand, 19992418 - 19992348
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataa 555  Q
    |||||||||||| ||||||||||| ||||||||||   ||||| ||||||||||| ||| ||||||||||||    
T  19992418 taaactctaaaagcgataaattacactaatgatac-ggcatatcaagaatttagatgttacttcttcaataa 19992348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 24975760 - 24975815
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtga 73  Q
    |||||||||| ||| |||||||||||||| |||||| ||||| |||||||||||||    
T  24975760 atagagttggctgacattggtgacattggtcaatcacaatgccacaatgcttgtga 24975815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 24975814 - 24975771
Alignment:
Q  84 cacaagcattgtggcattgtaattgaccaatgtcactaatgtca 127  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  24975814 cacaagcattgtggcattgtgattgaccaatgtcaccaatgtca 24975771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 579
Target Start/End: Original strand, 12974513 - 12974604
Alignment:
Q  486 aactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataa 579  Q
    |||||||||| ||||||| |||  ||||||||| | ||||| |||||| |||| ||| |||||||||||| |||||  ||||||| ||||||||    
T  12974513 aactctaaaagcgataaactacattaatgatacgagcatatcaagaatctagatgttacttcttcaataaatcacc--aagcatgcataaataa 12974604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 613
Target Start/End: Original strand, 13191759 - 13191891
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataa---t 580  Q
    |||| ||||||| |||||||||| |||||||||||   ||||| |||||| |||| ||| |||| ||||||| |||||  ||||||| ||||||||   |    
T  13191759 taaattctaaaagcgataaattatgctaatgatacggacatatcaagaatctagatgttacttcatcaataaatcacc--aagcatgcataaataatagt 13191856  T
Q  581 tatctc--aacatcgcagcggaataaaaacatcat 613  Q
    | ||||  ||||||||| ||||||||||| |||||    
T  13191857 tttctcaaaacatcgcaccggaataaaaatatcat 13191891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 12700411 - 12700456
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||||    
T  12700411 gtggtggccggggttcaaaccctagaccttgcatatattatgcatt 12700456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 473
Target Start/End: Original strand, 26181705 - 26181758
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttac 473  Q
    ||||||||| |||||||||| |||||||||| | |||||||||||| |||||||    
T  26181705 gtggtgtccagggttcgaactctagatcttgaagatattatgcattgtccttac 26181758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 31654376 - 31654332
Alignment:
Q  75 agagagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||    
T  31654376 agagagaaacacaagcattgtgacattgtgattggccaatgtcac 31654332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 14153410 - 14153355
Alignment:
Q  345 tatttttgtcatttattttgggaatgagcaaaatcgtttgagtaaatagcagaatt 400  Q
    |||||| |||||||| ||||||||||||||||||| |||| ||||  |||||||||    
T  14153410 tattttggtcatttactttgggaatgagcaaaatcatttgggtaatgagcagaatt 14153355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 2726407 - 2726461
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| |||||||||||||||  || ||||||||||||||||||| ||| ||||    
T  2726407 gtggtgaccggggttcgaaccccggaccttgcatatattatgcattgtccatacc 2726461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 7082982 - 7083036
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| | |||||| |||| | ||||||||||||||||||||||| ||||||||    
T  7082982 gtggtggctggggtttgaactccagatcttgcatatattatgcattgtccttacc 7083036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 24587469 - 24587523
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||| ||| |||||||||| |||||| ||||  ||||||||||||    
T  24587469 atagagttgggtgacattagtgacattggtcaatcacaatgtcacaatgcttgtg 24587523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 467
Target Start/End: Complemental strand, 33930557 - 33930519
Alignment:
Q  429 ggggttcgaaccctagatcttgcatatattatgcatttt 467  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  33930557 ggggttcgaaccctaaaccttgcatatattatgcatttt 33930519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 458
Target Start/End: Original strand, 34247831 - 34247869
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatatt 458  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  34247831 gtggtgtccggggttcgaacccgcgatcttgcatatatt 34247869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 12000 - 12045
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||||||| ||  |||||||||| ||||||||||||||||||    
T  12000 gtggtgtccgggatttaaaccctagatattgcatatattatgcatt 12045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 400
Target Start/End: Complemental strand, 24326994 - 24326945
Alignment:
Q  351 tgtcatttattttgggaatgagcaaaatcgtttgagtaaatagcagaatt 400  Q
    ||||||||||||||||||||||| || || |||||||||  |||||||||    
T  24326994 tgtcatttattttgggaatgagcgaattcatttgagtaatgagcagaatt 24326945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 28592677 - 28592722
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||||| ||||||||||| ||| ||| |||||||||||||||    
T  28592677 gtggtgtccgaggttcgaaccccagaccttacatatattatgcatt 28592722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 465
Target Start/End: Complemental strand, 12808931 - 12808895
Alignment:
Q  429 ggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  12808931 ggggttcgaaccccagaccttgcatatattatgcatt 12808895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 34474297 - 34474253
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||| |||||||||||||| | || |||||||||||||||||||    
T  34474297 tggtggccggggttcgaaccatggaccttgcatatattatgcatt 34474253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 7055 - 7170
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| |||||||| ||| |||||||| ||||  ||||||||||||||||||  |||||||||||||||||| |||||| |||| ||||||    
T  7055 atagagttgggtgacattggtgatattagccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatg 7154  T
Q  116 tcactaatgtcaccaa 131  Q
    |||| |||||||||||    
T  7155 tcaccaatgtcaccaa 7170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 7176 - 7123
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||| ||| ||||||||||||||||||||| ||||  ||||||||||||    
T  7176 atagagttgg-tgacattggtgacattggccaatcacaatgtcacaatgcttgtg 7123  T

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Target: scaffold0016 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 49711 - 49814
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaag--agagaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| |||| |||||||| ||||||| ||||  ||||||||||||||||  ||||||||||||||||||||||||||| |||| ||||||    
T  49711 atagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtgaaagaaagagaaacacaagcattgtggcattgtgattggccaatg 49810  T
Q  116 tcac 119  Q
    ||||    
T  49811 tcac 49814  T

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Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 49815 - 49779
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtg 72  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  49815 ggtgacattggccaatcacaatgccacaatgcttgtg 49779  T

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Target: scaffold0018 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 482 - 562
Target Start/End: Original strand, 49964 - 50045
Alignment:
Q  482 cataaactctaaaaacgataaa-ttacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcacca 562  Q
    |||||||||||||| ||||||| |||||| ||||||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  49964 cataaactctaaaagcgataaaattacgcaaatgatacagtcatataaagaatttagatgttacttcttcaataattcacca 50045  T

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Target: scaffold0161 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 27228 - 27341
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagag--agaaacacaagcattgtggcattgtaattgaccaatg 115  Q
    |||||||||||||| ||| |||| |||||||||||| ||||  | ||| ||||||||||||  ||||||| ||||||||||||||||| |||| |||||     
T  27228 atagagttgggtgacattagtgatattggccaatcacaatgtcataattcttgtgaaagagagagaaacagaagcattgtggcattgtgattggccaata 27327  T
Q  116 tcactaatgtcacc 129  Q
    |||| |||||||||    
T  27328 tcaccaatgtcacc 27341  T

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Target: scaffold0161; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 27350 - 27299
Alignment:
Q  18 atagagttgggtgatattggtgacattggccaatcataatgctacaatgctt 69  Q
    |||||||||||||| |||||||| |||||||||||| ||||| |||||||||    
T  27350 atagagttgggtgacattggtgatattggccaatcacaatgccacaatgctt 27299  T

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Target: scaffold0118 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 484 - 613
Target Start/End: Complemental strand, 17807 - 17675
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtataaataattat 583  Q
    |||||||||||| ||||||||||||| |||||||| | ||||| |||||| |||| ||| |||||||||||| |||||||  ||||| ||||||||| ||    
T  17807 taaactctaaaagcgataaattacgcgaatgatacgagcatatcaagaatctagatgttacttcttcaataaatcaccaa--gcatgcataaataataat 17710  T
Q  584 ---ctcaa--catcgcagcggaataaaaacatcat 613  Q
       |||||  ||||||||| |||||||||||||||    
T  17709 tttctcaaaacatcgcagcagaataaaaacatcat 17675  T

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Target: scaffold0118; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 484 - 555
Target Start/End: Complemental strand, 15890 - 15819
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataa 555  Q
    |||||||||||| |||||||||||||||||||||| | ||||| |||||| || | ||| |||||| |||||    
T  15890 taaactctaaaagcgataaattacgctaatgatacgaacatatcaagaatctatatgttacttctttaataa 15819  T

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Target: scaffold0047 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 63869 - 63784
Alignment:
Q  36 ggtgacattggccaatcataatgctacaatgcttgtgaaaga--gagaaacacaagcattgtggcattgtaattgaccaatgtcac 119  Q
    |||||||||||||||||| ||||  |||||||||||||||||  ||||||||||| |||||||||||||| |||| ||||||||||    
T  63869 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcac 63784  T

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Target: scaffold0213 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 484 - 560
Target Start/End: Original strand, 26388 - 26463
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcac 560  Q
    ||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||| ||| |||||||||||| ||||    
T  26388 taaactctaaaaacgataaattatgctaatgatacga-catatcaagaatttagatgttacttcttcaataaatcac 26463  T

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Target: scaffold0282 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 506 - 559
Target Start/End: Complemental strand, 21548 - 21495
Alignment:
Q  506 acgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattca 559  Q
    |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  21548 acgcaaatgatacaatcatataaagaatttagatgttacttcttcaataattca 21495  T

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Target: scaffold0238 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 25460 - 25406
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||||| |||||||||||||| || ||||||||||||||||||| ||||||||    
T  25460 gtggtgtctggggttcgaaccctggaccttgcatatattatgcattgtccttacc 25406  T

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Target: scaffold0068 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 613
Target Start/End: Original strand, 49618 - 49750
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtata---aataat 580  Q
    |||||||||||| ||||||||||| |||||||||||| ||||| |||||| |||| ||| |||   |||||| |||||  ||||||  |||   ||||||    
T  49618 taaactctaaaagcgataaattacactaatgatacaaacatatcaagaatctagatgttacttggccaataaatcacc--aagcatacataaataataat 49715  T
Q  581 tatctc--aacatcgcagcggaataaaaacatcat 613  Q
    | ||||  ||||||||| |||||||||||||||||    
T  49716 tttctcaaaacatcgcaacggaataaaaacatcat 49750  T

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Target: scaffold0068; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 613
Target Start/End: Original strand, 63066 - 63198
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaaaagcatgtata---aataat 580  Q
    |||||||||||| ||||||||||| |||||||||||| ||||| |||||| |||| ||| |||   |||||| |||||  ||||||  |||   ||||||    
T  63066 taaactctaaaagcgataaattacactaatgatacaaacatatcaagaatctagatgttacttggccaataaatcacc--aagcatacataaataataat 63163  T
Q  581 tatctc--aacatcgcagcggaataaaaacatcat 613  Q
    | ||||  ||||||||| |||||||||||||||||    
T  63164 tttctcaaaacatcgcaacggaataaaaacatcat 63198  T

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Target: scaffold0112 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 606
Target Start/End: Original strand, 18432 - 18558
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaa--aagcatgtataaataatt 581  Q
    ||||| || ||| ||||||||||  |||||||||| ||||||| ||||||||| | ||| | |||||||||| |||||||  | ||||  |||| |||||    
T  18432 taaacccttaaagcgataaattaaactaatgatacgatcatatcaagaatttaaatgttacatcttcaataaatcaccaagcatgcataaataactaatt 18531  T
Q  582 atctcaa--catcgcagcggaataaaa 606  Q
     ||||||  ||||||||||||||||||    
T  18532 ttctcaaaacatcgcagcggaataaaa 18558  T

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Target: scaffold0615 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 484 - 560
Target Start/End: Original strand, 4614 - 4689
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcac 560  Q
    ||||||| |||| ||||||||||||||||||||||   ||||| |||||| |||| ||| |||||||||||| ||||    
T  4614 taaactcgaaaagcgataaattacgctaatgatac-ggcatatcaagaatctagatgttacttcttcaataagtcac 4689  T

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Target: scaffold0064 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 563
Target Start/End: Original strand, 6533 - 6620
Alignment:
Q  475 gtaacttcataaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaa 563  Q
    |||||| | |||| ||||||| ||||||||||||||||||||| || | |||  |||||||||| ||| | |||||||||| |||||||    
T  6533 gtaactccctaaattctaaaagcgataaattacgctaatgatataa-cctatccagaatttagatgttacatcttcaataaatcaccaa 6620  T

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Target: scaffold0536 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 4909 - 5010
Alignment:
Q  27 ggtgatattggtgacattggccaatcataatgctacaatgcttgtgaaagagag--aaacacaagcattgtggcattgtaattgaccaatgtcactaatg 124  Q
    ||||| ||||||||||| | ||||||| |||  |||||||||||||||||||||  ||||| |||   |||  ||||||||||||||||| |||| |||     
T  4909 ggtgacattggtgacatcgaccaatcacaatattacaatgcttgtgaaagagagacaaacataag---tgtaacattgtaattgaccaatatcaccaata 5005  T
Q  125 tcacc 129  Q
    |||||    
T  5006 tcacc 5010  T

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Target: scaffold0043 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 563
Target Start/End: Complemental strand, 15278 - 15200
Alignment:
Q  484 taaactctaaaaacgataaattacgctaatgatacaatcatataaagaatttagacgttgcttcttcaataattcaccaa 563  Q
    ||||||||| || ||||||||||| ||||||||||   ||||| ||||||||||| ||| | |||||||||| |||||||    
T  15278 taaactctataagcgataaattacactaatgatac-ggcatatcaagaatttagatgttacatcttcaataaatcaccaa 15200  T

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Target: scaffold0126 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 432 - 474
Target Start/End: Original strand, 34890 - 34932
Alignment:
Q  432 gttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    ||||||||||| || ||||||||||||||||||| ||||||||    
T  34890 gttcgaaccctggaccttgcatatattatgcattgtccttacc 34932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 18364 - 18310
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| ||||  |||||||||| ||||||||||||||||| |||| ||||||||    
T  18364 gtggtggccggaattcgaaccctggatcttgcatatattatacattgtccttacc 18310  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 75396 - 75342
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcattttccttacc 474  Q
    |||||| ||||| |||||||||  || ||||||||||||||||||| ||||||||    
T  75396 gtggtggccgggattcgaaccccggaccttgcatatattatgcattgtccttacc 75342  T

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Target: scaffold0533 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 474
Target Start/End: Original strand, 8842 - 8895
Alignment:
Q  422 ggtgtccggggttcgaaccc-tagatcttgcatatattatgcattttccttacc 474  Q
    ||||| ||| |||||||||| | |||||||||||||||||||||| ||||||||    
T  8842 ggtgttcggagttcgaacccctggatcttgcatatattatgcattgtccttacc 8895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 4541 - 4496
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||||||| ||||||| ||||| ||| |||||||||||||||    
T  4541 gtggtgtccgggattcgaactctagaccttacatatattatgcatt 4496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 17575 - 17530
Alignment:
Q  420 gtggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    |||||||||||| ||||||||| | | |||||||||||||||||||    
T  17575 gtggtgtccgggattcgaaccccaaaccttgcatatattatgcatt 17530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 6784 - 6740
Alignment:
Q  421 tggtgtccggggttcgaaccctagatcttgcatatattatgcatt 465  Q
    ||||| |||||||||||||| | || |||||||||||||||||||    
T  6784 tggtggccggggttcgaaccatggaacttgcatatattatgcatt 6740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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